TCONS_00028942 (transcript) - C. hemisphaerica

Overview
NameTCONS_00028942
Unique NameTCONS_00028942
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length147

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00028942 ID=TCONS_00028942|Name=TCONS_00028942|organism=Clytia hemisphaerica|type=transcript|length=147bp
CGTGTTGTTTTGGACATGGTTAGAGGGAAGGAACCTGGATATATAAACGG
ACAGTTCACTTTAAACGTGAGGATCATTAATGCTTTAATGGTCTatgaaa
aataacaagaaaTATGTTGCAATGACTTTTGGAATAACAGACATTGA
Run BLAST on NCBI

transcript from alignment at sc0000715:158444..158590

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00028942 ID=TCONS_00028942|Name=TCONS_00028942|organism=Clytia hemisphaerica|type=transcript|length=147bp|location=Sequence derived from alignment at sc0000715:158444..158590 (Clytia hemisphaerica)
TCAATGTCTGTTATTCCAAAAGTCATTGCAACATAtttcttgttattttt
catAGACCATTAAAGCATTAATGATCCTCACGTTTAAAGTGAACTGTCCG
TTTATATATCCAGGTTCCTTCCCTCTAACCATGTCCAAAACAACACG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_016434XLOC_016434Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00028942-exon-sc0000715-1491911889:158444..158590TCONS_00028942-exon-sc0000715-1491911889:158444..158590Clytia hemisphaericaexon
TCONS_00028942-exon-sc0000715-1510915933:158444..158590TCONS_00028942-exon-sc0000715-1510915933:158444..158590Clytia hemisphaericaexon
TCONS_00028942-exon-sc0000715-1575043694:158444..158590TCONS_00028942-exon-sc0000715-1575043694:158444..158590Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000715supercontigsc0000715:158444..158590 .
Expression
No biomaterial libraries express this feature.
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00028942 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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