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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00028934 ID=TCONS_00028934|Name=TCONS_00028934|organism=Clytia hemisphaerica|type=transcript|length=1330bp
AACGAGAGTAATGATATCCAATAGCGAAAACACATCAGCCATTTGAGACA
GTGTTGTAAAGTAACTTCTGTTTTTCTTTTGCTCTCAATATAATGGTCGA
ACCTTGTTCTAAAGGCGCGTAAAGTAGACTGCAGGAAGAATCCATTAGTG
CCATGGCTTAAATACTGCAAAGTGTACATGATTAATGAAGAGAATTTCCT
AATATAACtaacttttctttattttcctgTGGTTAAAGTGTTTAGTGATA
CTTGTATACCATTAACGTAAATTAATTGCTTTTTACGATCATTTGAAACA
TATCTAATGTTAATTATAAAACAAATAGTTTTAGCCAGCCCCCTTTTTAG
TTGGTTACGTTGGAAGTGAATCCCTAAACACTTGATAGTCGTCAATCAAT
TAAATGAACGTGATATCGAGAATGAGACGTCAGTTGTTCAAACTAAATgg
tagtcggttattactttaACGTCATGCCGTGATTAAAGCCGTACTTACGA
CAGACGCCATGATTAGATCGATGATGagaaaaactttaatcaaaGTTTGA
ACAGACCTGAACAAACTAATACATAattcacccctgtatcacagacccgg
CTGGTCCACGAAAATCGACCAAAAACATTTGCCATCCGTCTTAATCATAA
AGAGACTTCACAAATTCTCGTCTTCTCCGTCAACGGTGTGAATGACACCA
AAATTTCGAAGATATAACAAAATccaaatacagttgacgctctctaagtC
GATTTCCATAtgtattttcatcgaataagggatcGTATTAAATAGGAGAg
catcgtttatgagagtttcttgttgacggtgactttcaataataTCGAAT
AAtgaagcgtatcgaatagtagaacttTGAATTAGAATGCTTCAACTTTA
AATCAAAGATAGAGCCATTTTCCAGCAATTGAACTCAGATTTACTTGACT
ATAGAATAGATATCGCGTTCTCGTCTTGATGTGCCTTTTGTCCAGCTCAC
TCTGTTGTTCTAGACTGAATCCTCTCCATAACTAATCGATAAAGGATCGA
CCATACAAAATACGATTTAAAAATAACCAACTACGCGTGCCATCCAAGAG
ATTAAACTACGATTTAACATTCATATCACCAAATTTGATCTATGGAAATA
AAAATTCCAATCCTCCCATTTTCATCTTACAAAACATAAATATTTCAACA
ATGTCAAAGATGGTGGGAAAAACAATGTGATTGAAAACTAGTGGAGTCAA
AGCAAATGATTTATTACATCGCGTTCTGATTGATTGTGCGTTTTTAACGA
TACACAGACAATTCAAACTTTTGGTAAGTG Run BLAST on NCBI transcript from alignment at sc0000715:61701..63030 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00028934 ID=TCONS_00028934|Name=TCONS_00028934|organism=Clytia hemisphaerica|type=transcript|length=1330bp|location=Sequence derived from alignment at sc0000715:61701..63030 (Clytia hemisphaerica)
CACTTACCAAAAGTTTGAATTGTCTGTGTATCGTTAAAAACGCACAATCA
ATCAGAACGCGATGTAATAAATCATTTGCTTTGACTCCACTAGTTTTCAA
TCACATTGTTTTTCCCACCATCTTTGACATTGTTGAAATATTTATGTTTT
GTAAGATGAAAATGGGAGGATTGGAATTTTTATTTCCATAGATCAAATTT
GGTGATATGAATGTTAAATCGTAGTTTAATCTCTTGGATGGCACGCGTAG
TTGGTTATTTTTAAATCGTATTTTGTATGGTCGATCCTTTATCGATTAGT
TATGGAGAGGATTCAGTCTAGAACAACAGAGTGAGCTGGACAAAAGGCAC
ATCAAGACGAGAACGCGATATCTATTCTATAGTCAAGTAAATCTGAGTTC
AATTGCTGGAAAATGGCTCTATCTTTGATTTAAAGTTGAAGCATTCTAAT
TCAaagttctactattcgatacgcttcaTTATTCGAtattattgaaagtc
accgtcaacaagaaactctcataaacgatgcTCTCCTATTTAATACgatc
ccttattcgatgaaaatacaTATGGAAATCGacttagagagcgtcaactg
tatttggATTTTGTTATATCTTCGAAATTTTGGTGTCATTCACACCGTTG
ACGGAGAAGACGAGAATTTGTGAAGTCTCTTTATGATTAAGACGGATGGC
AAATGTTTTTGGTCGATTTTCGTGGACCAGccgggtctgtgatacagggg
tgaatTATGTATTAGTTTGTTCAGGTCTGTTCAAACtttgattaaagttt
ttctCATCATCGATCTAATCATGGCGTCTGTCGTAAGTACGGCTTTAATC
ACGGCATGACGTtaaagtaataaccgactaccATTTAGTTTGAACAACTG
ACGTCTCATTCTCGATATCACGTTCATTTAATTGATTGACGACTATCAAG
TGTTTAGGGATTCACTTCCAACGTAACCAACTAAAAAGGGGGCTGGCTAA
AACTATTTGTTTTATAATTAACATTAGATATGTTTCAAATGATCGTAAAA
AGCAATTAATTTACGTTAATGGTATACAAGTATCACTAAACACTTTAACC
AcaggaaaataaagaaaagttaGTTATATTAGGAAATTCTCTTCATTAAT
CATGTACACTTTGCAGTATTTAAGCCATGGCACTAATGGATTCTTCCTGC
AGTCTACTTTACGCGCCTTTAGAACAAGGTTCGACCATTATATTGAGAGC
AAAAGAAAAACAGAAGTTACTTTACAACACTGTCTCAAATGGCTGATGTG
TTTTCGCTATTGGATATCATTACTCTCGTT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00028934-exon-sc0000715-1491911889:61701..63030 | TCONS_00028934-exon-sc0000715-1491911889:61701..63030 | Clytia hemisphaerica | exon |
| TCONS_00028934-exon-sc0000715-1510915933:61701..63030 | TCONS_00028934-exon-sc0000715-1510915933:61701..63030 | Clytia hemisphaerica | exon |
| TCONS_00028934-exon-sc0000715-1575043694:61701..63030 | TCONS_00028934-exon-sc0000715-1575043694:61701..63030 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000715 | supercontig | sc0000715:61701..63030 . |
Blast
The following BLAST results are available for this feature:
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