TCONS_00028908 (transcript) - C. hemisphaerica

Overview
NameTCONS_00028908
Unique NameTCONS_00028908
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length135

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00028908 ID=TCONS_00028908|Name=TCONS_00028908|organism=Clytia hemisphaerica|type=transcript|length=135bp
GTTCATTCTCTTGTTATCTTTCGAACGTTATTACGGCTGCATCAATTTGA
CAAAGAAATGGAAACGGAGAACAATCTTGATCATTACTGGTTTCATCTGG
TGTTTGACCATCGTCATCAGGTTACCAGATCTGAT
Run BLAST on NCBI

transcript from alignment at sc0000714:149941..150075

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00028908 ID=TCONS_00028908|Name=TCONS_00028908|organism=Clytia hemisphaerica|type=transcript|length=135bp|location=Sequence derived from alignment at sc0000714:149941..150075 (Clytia hemisphaerica)
ATCAGATCTGGTAACCTGATGACGATGGTCAAACACCAGATGAAACCAGT
AATGATCAAGATTGTTCTCCGTTTCCATTTCTTTGTCAAATTGATGCAGC
CGTAATAACGTTCGAAAGATAACAAGAGAATGAAC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_016417XLOC_016417Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00028908-exon-sc0000714-1491911889:149941..150075TCONS_00028908-exon-sc0000714-1491911889:149941..150075Clytia hemisphaericaexon
TCONS_00028908-exon-sc0000714-1510915933:149941..150075TCONS_00028908-exon-sc0000714-1510915933:149941..150075Clytia hemisphaericaexon
TCONS_00028908-exon-sc0000714-1575043694:149941..150075TCONS_00028908-exon-sc0000714-1575043694:149941..150075Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000714supercontigsc0000714:149941..150075 .
Expression
No biomaterial libraries express this feature.
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00028908 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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