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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00028777 ID=TCONS_00028777|Name=TCONS_00028777|organism=Clytia hemisphaerica|type=transcript|length=633bp
cccttcttcatcttcatccaTTTTATCTTGCAGATCTTGTGTAGCCGTAT
CATGGAGAAGCAGGACACCTAGGGCGCAAAGACCGCCCAAAACGCCATTG
ATGGTGTAAGGCAGATGTTTTGCTACGTCATAAAGTGGAGCGGATTGCGG
AGCCACGATACCACCGATTCGGCCGCAAATCGAAACGAAACCGTAGGCTG
ATGACCTGAAcaattaaaaTCAACGCCCAACACATAATCAAGCTGCACCC
TTCGCCGACGCCCATTAGTGACATATTAGCTGCTGGATTACCTGATAACA
AGCTAACTCCAAAAGTCAATGCATAATACGAATAAGCGCATGTGAACCTA
GAAGGAAAAGAAGATTGATTGTCAGGGGAGTATTCTCATTGATTGCCATC
CATTTTCCATTGGGAGCTTTTGGGCAcgtaaaaatacatcaaaattcGAA
AAACGGCTTTCCTTGGGGTACCGTCCGGGGAGTTGCCTGGAGACTGTATT
TACCagtaaaattcctttttaaaaatactgATACAGAAGTTTTATGTGTT
TTGAAAAAGACTTGTCGTCCCTTTTAATCGTTTTCATTTAAAGTAGCTCT
GGAAATGAATCTTAACTCATAAAATGTCATAAC Run BLAST on NCBI transcript from alignment at sc0000703:180401..183662- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00028777 ID=TCONS_00028777|Name=TCONS_00028777|organism=Clytia hemisphaerica|type=transcript|length=3262bp|location=Sequence derived from alignment at sc0000703:180401..183662- (Clytia hemisphaerica)
CCCTTCTTCATCTTCATCCATTTTATCTTGCAGATCTTGTGTAGCCGTAT
CATGGAGAAGCAGGACACCTAGGGCGCAAAGACCGCCCAAAACGCCATTG
ATGGTGTAAGGCAGATGTTTTGCTACGTCATAAAGTGGAGCGGATTGCGG
AGCCACGATACCACCGATTCGGCCGCAAATCGAAACGAAACCGTAGGCTG
ATGACCTGAACAATTAAAAGTAAAATATTTTACTGTTAGACTACCTTATC
GGGGAAAACTTCGTCGGGCTGCGTCGGGGAAAATTTTCGTTGGGAAAAAA
TATTCGTCACTTTTCCCCGACGAAGTTTTCCCCGATAAGGTATTTTTCGC
ATCACTTTAACTTCGCTTTGTCTAAATTTTAGGGCTCTTCTCATTCCTTG
GGTTACCGTCCAGGGAGCTGCCTGGAGACTGAATTTACCAGTAAGTTGAG
AGCAAAATTTCGAGAAGGCTCAGTGTTGAGCTGGCCATATTTTTTTATTT
TTAAGGATTATTGGTCGAATGGGCCAGAGTGGAATCTTCAAACTTTCTCA
GACGAAGAAAAAGTGAACATTTGCGCTGTTTTTGGAATGACAGATTGAAT
CTAGCGTTTTTACACGGAACATTTTTCTAAATCTGGCGATAGTTTCCCCT
ACCAATACGGCGTGGCTTCTGTGTTAAAACCACGCGGTTCGTGAGTTATG
GATGAGAAATAGTGGCTTAATGTCCCACCCAAAATTTATATCGAGGCTTT
AAACTCAATGATTCAGCCGACTGGTATACGTGAACGTATATATGGAAATA
ACCTAAATACCAAAGCCATGGGTCTTGAAACGTACTAACTTATTATAGTA
TATCATGAAATATTTGGGTTTTAGGATGAATAATTTCAGCTGAGTCACCA
AATTCATTGACCTAAATATTTCGTGATCTGAAATAAGTGGCTTAATTTCC
CACCCAAAAGTTTTATGTCTTTAGGTCCTCCGAGGCTTTAAATTCAGCCG
ACGGGTATTTGTTAACGTATGAAAGATAGCCTAAATACTAAAAAAATCTT
TATACTAACCTCAACATTGTAGGGAATATTTCTACAGTGTAGATGATAAG
TGAACCCCAGGCTCCTGATAGAAATAGCCTAGATACCAATACCCTCGTTA
TACTAACCTCAACATTGTAGGGAATATTTCTACAGTGTAGATGATAAGTG
AACCCCAAGCTCCTGATAGAAATAGCCTAGATACCAATACTCTCTTTATA
CTAACCTCAACATTGTAGGGAATATTTCTACAGTGTAGATGATAAGTGAA
CCCCAGGCTCCTGATAGAAATAGCCTAGATACCAATACCCTCGTTATACT
AACCTCAACATTGTAGGGAATATTTCTATAGTGTAGATGATAAGTGAACC
CCAGGCTCCTGATAGAAATAGCCTAGATACCAATACCCTCGTTATACTAA
CCTTAACATTGTAGGGAATATTTCTATAGTGTAGATGATAAGTGAACCCC
AACCTCCTGATAGAAATAGCCTAGATACCAATACCCTCTTTATACTAACC
TCAACATTGTAGGGAATATTTCTATAGTGTAGATGATAAGTGAACCCCAA
TCTCCTGATAGAAATAGCCTAGATACCAATACCCTCTTTATACTAACCTC
AACATTGTAGGGAATATTTCTATAGTGTAGATGATATGTGAACCCCAAGC
TCCTGATAGAAATAGCCTAGATACCAATACCCTCTTTATACTAACATCAA
CATTGTAGGGAATATTTCTATAGTGTAGATGATATGTGAACCCCAAGCTC
CTGATAGAAATAGCCTAGATACCAATACCCTCGTTATACTAACCTCAACA
TTGTAGGGAATATTTCTACAGTGTAGATGATAAGTGAACCCCAGGCTCCT
GATAGAAATAGCCTAGATACCAATGCCCTCGTTATACTAACCTCAACATT
GTAGGGAATATTTCTACAGTGTAGATGATAAGTGAACCCCAGGCTCCTGA
TAGAAATAGCCTAGATACCAATGCACAAACTGTCTTTATCGTCTCCGAAT
CTTCTGCTTTGGTAGCGTAACCGATAGTGATGACGAAGGAGGAGAGAGCG
GTGCACGTGAATAGGATAACTGTTGTGTATTTTCGACCAAATCTAAAGTG
GAATGAAAGTAGGAAGTTCAGCTTCAATTACATCATAGTCCGTATAAAAC
TCTGGTCTGGAGGCTTATTGTTTTTAACTTTTTGCTAGCTTTTTCCTTTG
TTAATATCAAAAGGTAGGGTTTGCTTTGGCTAGTAAACCACGTCGTTGTA
TTTCGCTACAGCTTAAGCTTGCAATGGGCTCTATGTCTATATGTTCACTG
AATACAAACCACACAACTCTCCCGCGGCAATTTCTATTTTTTATAAGAAC
TCTTTATAAGCACTATTCCTGCGTTCCTGTGTCCAAAGAAAGACAGACGC
TTGCTAGTCTAGGTTTGTAGAACGTCACTCAGAGAGTATCAACTATATTT
GAAAAGGGGATATACCGCCACACCGGAAAGAAAGTCCAGCAGGTGTAATA
GATCCTTTAAATACTCCCCGTACGACAGCTATTCGATCTAAAGGTCATGG
CCCCGTAAGCGAAAGGAGACGGTTCTTTTCGATGGCTTTCCAGATTTTGG
ATGAATATTGAGCGCTGTGATCGGCTAAAGTAAAGCAATCGAAGCTTTAA
AGCCAATCAGGACAGATGATCGCAGGGTCACGAAAAACATCTTTGAAGTC
TTCAGGTTACTTTGCGAAGCTTTAAAGCCAATCCTTAGTTATAAATTTAC
CCAAAACCTTACTCATTCTTATAAAAAGAAATTTTACTTACTTTTTAGTC
AACGCCCAACACATAATCAAGCTGCACCCTTCGCCGACGCCCATTAGTGA
CATATTAGCTGCTGGATTACCTGATAACAAGCTAACTCCAAAAGTCAATG
CATAATACGAATAAGCGCATGTGAACCTAGAAGGAAAAGAAGATTGATTG
TCAGGGGAGTATTCTCATTGATTGCCATCCATTTTCCATTGGGAGCTTTT
GGGCACGTAAAAATACATCAAAATTCGAAAAACGGCTTTCCTTGGGGTAC
CGTCCGGGGAGTTGCCTGGAGACTGTATTTACCAGTAAAATTCCTTTTTA
AAAATACTGATACAGAAGTTTTATGTGTTTTGAAAAAGACTTGTCGTCCC
TTTTAATCGTTTTCATTTAAAGTAGCTCTGGAAATGAATCTTAACTCATA
AAATGTCATAAC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00028777-exon-sc0000703-1575043694:183444..183662 | TCONS_00028777-exon-sc0000703-1575043694:183444..183662 | Clytia hemisphaerica | exon |
| TCONS_00028777-exon-sc0000703-1575043694:180401..180814 | TCONS_00028777-exon-sc0000703-1575043694:180401..180814 | Clytia hemisphaerica | exon |
| TCONS_00028777-exon-sc0000703-1510915933:183444..183662 | TCONS_00028777-exon-sc0000703-1510915933:183444..183662 | Clytia hemisphaerica | exon |
| TCONS_00028777-exon-sc0000703-1510915933:180401..180814 | TCONS_00028777-exon-sc0000703-1510915933:180401..180814 | Clytia hemisphaerica | exon |
| TCONS_00028777-exon-sc0000703-1491911889:183444..183662 | TCONS_00028777-exon-sc0000703-1491911889:183444..183662 | Clytia hemisphaerica | exon |
| TCONS_00028777-exon-sc0000703-1491911889:180401..180814 | TCONS_00028777-exon-sc0000703-1491911889:180401..180814 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000703 | supercontig | sc0000703:180401..183662 - |
Blast
The following BLAST results are available for this feature:
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