TCONS_00028775 (transcript) - C. hemisphaerica

Overview
NameTCONS_00028775
Unique NameTCONS_00028775
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1928

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00028775 ID=TCONS_00028775|Name=TCONS_00028775|organism=Clytia hemisphaerica|type=transcript|length=1928bp
agaaaagaaagtacattttatcaagaaaattaaaaaaaatgtgaaGACTG
AAGTCGATAGGATagttaaaaatttttgttgttaGGAAACCTTAGGGAAA
GAAAAATGGACACCACGAAACGACGAATTGGATATAATATTTGTGCATCA
AGTGATTCATAACAATATACAAAATAAACGGCTGTTGAAATTAATCGAAA
ATGGGGTCTGGTACGAGCAAGAAAGGAAACTTAGTCATCACCAGCTGTTG
TGGCAACAAAGGAGAAGACAGGACAACCTCCTCAACAAGTATACGACAAT
TAAAACAAGTAGCACCTGTCGCACAACACCAAAATCCTCCTAAAGAAGGA
AGGAATTCATCTACTGACAACACGCAAAATATCATCAACGTCAAACCAAT
ACCAGAAGAACACAAAATGGGATCCGAAAGCTTTTACATTGAGATCAACT
TCAACTATGGCAAATTATCCTACACCACGTTTTGGCGTGCTTGGGAAAAA
GATGCTGGCTTGAGAGACGCCATGCAACAAGGAGTCATCACAAATCTGCT
CAAAGTATCCGGCGAAAACAAATTAATCATGATTGTAAAAATCAGCGGAG
ATCTACTGGACAATTTACTATATTCCAAAATCCAAGTCATTGCTTATTAT
GCAGATTTGATGAAAATCTCAGTCACGCCGACATATGATTATGAATCATT
TGCTAATATAGTGAATACTATTACTCAAGTGGAGGAAACTTTTGAACAAT
TACCCTCTTTAGATCAAAATACAGGTCTTTTCCATATCTTGGATATTAAA
ATGGAGTTCAGAGGTATGACACAAGAGGATTTTCTCACCATCTGGAAAGA
GGAAATCAAAGCAGCGCTTGGAGCTAAAGAAAAAGGCATTGCATTGGACA
TATTGAAATCAGTAGCAGAAAGacgtgtttttgttttgacaCGTGTAGAC
TCTTTAGCCTTATTAGACACTATTATTCTTACGCTACCAATGATGAGGAA
AATGGGAGACCAGATGTATATCACATCTAAACgtgtttcaaaattcaata
ccTTCATCAAACAAATCAATTAAAAGCAACtgagaaaaaatttctttctc
caATTTTTGAATGTCTACGCCATTGAAACGAGATTAAACAAGATATTGAA
GTCAAAACAGACTAGGACCGCAAACAGAATGATAAACTTTGTGGAAAGAA
GTTGACTATATCTAgaatttttattacaaactgAAGAACCTTTGTTCTAT
TtacattttaaaagattttttcatgcTCCCTGCAATCTAGCTAGGTTAGT
ATATTGAAGTTTATCTTACAAAATaacttcaaaaatgaaaaatatttatt
acttAAAATTTATAAGACTTTTTGTGAGCTAACATTCCCAAATTGTGAAG
TTGTGAATATTTTATCATTATAATATAGAAATGTCTTAGTGTATCATAAT
ATAATATTTATCCATTTGTCGTCCATTTATAAAATTGGACAGTGTTTTGT
ACAAGGAAATGAGTGTAACAATGTCAGTCCTAAACATTCTCATATatcat
tttgtcattcaatttgGGCCAGAATTTCGGAAATTCTTCTtggattttag
ttcgtccaccctcactttaagatatgaatagaatctttccaagggtattt
ttgcaaaatttgccattttccaggaaGTATCCacttattttcaataatat
ttttttgacttgaaaaggttcgtccacccccttgtATGGTTTTTTAAAAG
ACTCCAAAGTCTCTCCAGAAGCTAAGATAAAAAAGATCTAAAAGAAAGGC
TGTGATCAAATCCATTTTGTGTTTGTATAGAATGGGTAAACTTTTAATGT
TTAAACTAAGAACGAAACTTGATAGCACCTTAAGTCTGTGTTTACGtgtc
tattttttcaaaatcacttACAGACGGC
Run BLAST on NCBI

protein sequence of TCONS_00028775-protein

>TCONS_00028775-protein ID=TCONS_00028775-protein|Name=TCONS_00028775-protein|organism=Clytia hemisphaerica|type=polypeptide|length=290bp
MGSGTSKKGNLVITSCCGNKGEDRTTSSTSIRQLKQVAPVAQHQNPPKEG
RNSSTDNTQNIINVKPIPEEHKMGSESFYIEINFNYGKLSYTTFWRAWEK
DAGLRDAMQQGVITNLLKVSGENKLIMIVKISGDLLDNLLYSKIQVIAYY
ADLMKISVTPTYDYESFANIVNTITQVEETFEQLPSLDQNTGLFHILDIK
MEFRGMTQEDFLTIWKEEIKAALGAKEKGIALDILKSVAERRVFVLTRVD
SLALLDTIILTLPMMRKMGDQMYITSKRVSKFNTFIKQIN
Run BLAST on NCBI

transcript from alignment at sc0000703:128176..139520-

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00028775 ID=TCONS_00028775|Name=TCONS_00028775|organism=Clytia hemisphaerica|type=transcript|length=11345bp|location=Sequence derived from alignment at sc0000703:128176..139520- (Clytia hemisphaerica)
AGAAAAGAAAGTACATTTTATCAAGAAAATTAAAAAAAATGTGAAGACTG AAGTCGATAGGATAGTTAAAAATTTTTGTTGTTAGGAAACCTTAGGGAAA GAAAAATGGACACCACGAAACGACGAATTGGATATAATATTTGTGCATCA AGTGATTCATAACAATATACAAAATAAACGGCTGTTGAAATTAATCGAAA ATGGTAACTATGTTTTTTTAACACAGCCCAACCTTTTTTTCTACTATACT TGTTATAGTATACACTGCTTGCTTATCTTTTCAGCAATTCAATTACACAT TGAGGGAGGTATAAACTTTTCAGCCATTCGGTATGGTCACAATGTAGAGT TCCATAGAAATTTATGAAAAGGTCTATTTCGTCCTAAAAATGAAGCTTAG AATAAATAAGCGCTTCTTCCATACATTAATGCTACTGAAATCTTCAACCA TCTTCAATCTTCAGCATATAAACCCATAGTCAAAGATGACTTGGTACGCG GTTATCGCACGTCAAATTTGAGAGATTATACATTGCAAATCTCGACTACG GTGCATTAAATTCCAACCCAATTCGGGTGACGAAGACGTGAACTCTTTAT ATTAAGCTTGTATAATTTACTTGACAAAAATACTATGTTGCATGCACCAA TATCCAACATTTGACGAATCTACCACATTGAGTTTCAAGCCGAAGGCTAG AGGTCAATCTCTAACCTTTCTCAGGCAAGAAAAATTGAAGCCTTAAAATA TGCGCCGTATTTTTGATGACGGATNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNACCAGGCGGGTC GCTCAAGGCCGCGCAACTTTGGTAGGATTTGTTGGCTTCAAATCCTACCA AGGAGATTGACCTCTAGCCTTCGGCTTGAAACTCAATGATCTACCAGTCT TCAGCCCATGACCTTTTCACTCACGTAGCTTACATCCTCAACTCTCTTTT TCTTTCCTTAATGCTTCCATTCGCCCACTCTTATCTTTCGGGTTCGGCGC GTTTGGATTCTCACCGGCGTAAAATAATTTCAACATATTCACAGCTTCAT CCGCCATTATGCCTGTCCGACAAACTAAAGGATCACCCATAGCAATCAAG CAACTACCAGATAGAGCGTCCATTTTTAATCGTTTCGCAACAGGTGGTAC TTCTTCTGTAGTATTGTTCCTAGGCATCCTCGAATGAGCATCTAGCCTTG ATCCGCAACCTCCAAAACGTTGATTCCCACATCCGTATACAACGTTTGTT AAACCGACTAGCCTTAAAGCGGCCGCGCACATAACACAAGGCTCCGTTGT CACGTATAAAGTAGAGTCTTTAAAAACTTGCGTCACGTCTAGTGATTCCG TTTTTGCATATTCACGTACCTCTTCGATCGCCAAAAGCTCAGCGTGCCGT GTAGCGTTTTTCGTACGGTTGACGTCGTTAGAGCCACGAGCAATGACGTT ATTCTTGTAAACAATAAGACAGGCGATAGGGACTTCACGTCTTTCAAGAG TTTCTTTGGAGAGCTTGAGAGCTTGTTTCATGTAAAATATATCTTGGTCC TCTATAAGGGAATTTACTGGTAACGTTCCTTTCTCGTTAGTTTTCATATT GTTATTTCGCCTTATCTTTATTCAAAAAATCTACAACAGAATATAAAACG ATGTAAGATAGACCTGAGAGATACACTTCTATGAATTATAAAACCTATCT TATTGGAACTAATTTTTGCGGAAACTAATATTCCCGGTCGAAAAAAAAAT CGGAAAAATTGCATTTCGCGGGTTTTAATTTTCACGGTTTTTGCCCTTTT TAGACAAATTTCTTTCATCTTCCTAGGGATTTTTCAAACTTATTGATAAA ATTGGAAAAAATTGTATTTCGCGGTTTGGCCAAAAAAACACGCGAAAAAC GCTAAAATTAATATCCACGAAAATTAAATCCAATAACGTACACGAAATAT GAATTAAAGGCAGCTAATAATGAGTGAAATATGGATTAAAAGGGACGGTC AGAAATGACTGCTAACAGAAGTAAGGAATGCATTAGTCTTGGGGGGGGAG GGGGTACTTGGGCAAGATGGTTGTCGGGTATGTGAAAGCTATAAAGGGTA AATCCTGGAAAGTCTTTCAAAGGGGTACAAAAACGATAAATTAACAATAA CAATTGGAAAAATGGTTTCCAAAGGGTCGCAAAACGTCTAATTCAGTCAA ATCTTCGAACTTTGGCTCGGACATACCCCCCGGGAACTTGAAACAGCCAC AATTGACCGACCGGTGACCAAACTAATATTGATGAGCTAGTCGCAACAAG TATCACCTTAGCAAGAAAAGTTTAAAACTAAAGTGGCTGCATAATGAATG ACGAAACCCTTTTCAGAATTTTAGAGAATTTTCACTTCAGAAAATTTGCA CATATCTTAAGAATACTAAAAACGAAAATTCTGAAATATTTAAGCTTGAA TTGCGCCATTTATACACGTGTTGTTACTCTTCCCGAGCTCACCAAAACTA AAGTGAGATAATATTTACAAGGGATAATGTAGAAAGGGGTATTCTCATAC AATATGGACTTCATTTCAACAACAGCAGCATATTGGAAGAATTTTTTCAC CGCTAGACTCTACTCCAAACATTTTGATTCCACCATCTAGCCTTGATCCG CAGCCAATCGATTGATAATACCTTTCATAATCAAGTCTTCAGTTAGACTA GCTTCCGACAGATTCTCCTCCGCCACATTATAGCTTAGAAGCACTTGCTT TTTCAATCTTTTGCACAATTTTTGACTCATTGTCAATGAACTTTGACCAA TCAAATCAACCGATGACGTCATCTTCATGTCTTGACTTATCGAGGCAATG TTTAATTTATCGAATTCGTTAGTCTCACCTACCCAAATCATGACAGCGTT GTCTAATGAAAGCGTTCGAACGTTGACGGCCTTTTCAGATATGGGGACTT GAAATATTAATTCTTTCATAATTCTGTAATTTTGAATTTTTTCTTTTCTT TTTTAAAATGTCACTGAAAGTAAAGAAGAAAAATAATACCCAACTGAGAA TTCAGCCACCTTTAAGTGAATAAAGCACGACTGATAAAGATCTTTGACGA AAAATTTATATTTTTTTAAATGCAGTCTTATATTTCAAAGACTTCCAAAA ATTGATTGTTACATTTGTGGTTATCGTATAAAAGAAGGTAAGCTAATCAA AAGAAAATTCAGCTCTTGAACTAAGATGTCAACTTCTTACTTGAGGTAAA TTTCAAATTTCTAAGCGTAAATCACCAATGCAATAAGAGAGGAGACCAGG TATGGTAAAATAATTACAAAAATATTTTTTGGAGATGTTCATTTCAAGGA TGCATTTCAAAATTCATTTCATCTAAATTTCATTCATTTAAATTTTGAAT ATGTTATAATTTGAAGCTTTTTTTCAAAGTTTAAAATTTAAAAACAATCA AGCAATATATTTCGGTGATAGAACACTTGTATTTTTATAAGCTTGAGAAT GGTGATACCACCGAAAAATATTGCTTGACTGTTTTTAAATTTTAAAATTT TGAATAGTCTTCAGAATATTAGTCTTCTGTACATAGACCCGATATCTATG GCTAATTCAAAATTCATTGCCGTACAGGTACTACGAAACGATAAACGTGA GATACACTCTGGTACAGAATATCAGAATATCTGGTAAACGTCCTTTTTTA AGAACATCCAATATTTCTGAAGCCTTCGGATGTTATTGACTTTTTGAATT TTAAACTCAAATGGCCTTAAGATGTGCTTAATGTGACCAAAACACTCAAA AAATATCGCAGATCACAAGATGCGCCAAAATTTATGGGTGCGCGAATATC CTATTTCATGAGGAGCGCGAAAATTAAGGCGCGAAAATTAGAGGCATGAA AATAAAATGCGTTCTTATAAAAAATGACGTGTCATTGAAGTAGACTGAAA GGTGCTGGGAAAAAAGTCTAATCAATAATCTAGGCTAACCTTGTTGAGAG TAAGAGCAAAGTATTTGATCAGCCTATATCTCAGTCAAGGAAGTTTACAT AAATTAATTTAAACTTGATAATTATATCAAATGAGCTGTCATTAACAGTG TTGGATGTTTTTTCTCTCTAAGAACAAATTAAATATAAGAACATGAGACT TAAAGGTCAAAAAATTTAAGAGCATTTTGAGGACTTTTTGTAATTTCTTA GACCAAAATTTAAGAAATGCTTAAAATTAGAATACTTTAAAAAAAATTTA AGCTTTTAAACCCAAAAAGCTAAGAACACACGAAGGCTCTAAATCTTTTT GATGTTCTAATGAAAAAAAAGCGTGTTAATTACAAACCACAGTGCAACAA CTGGGTGCGTTTTAATAACCAGTTATTTATAAGAAAGATTTATATTAAGA AAACCAAAAAACAAGGATCCATAATAAGAATTTATACACTGGAGTGTCTC TTTAACTCGAACAGGTTTTGTAGTCCATTCAATAAACTGCATAGCTCAAA ATTTCCATGTTCGAAATATGGAGACTACACTGTAAATTGTTATTGTCATG CAAAACGCAAAAGAATTTTCTTAGATAGGGATTTTTCTTATAACAGCCAA ACAAAGAGAGAAAAAAGACTTAACATCTCAAGAGAGGGTATTTCATTAAA AAACTAATAAGATTAAATGCTGTGATTCCCCCTTTTTGATAAATCTGAGA GCTTGCTGTTAATTATGAAATTAATATTTATTATACTAAACGTTGTATAA GCTTAGTATTATATTTTTTAACTGGAAAATCTATTCTACATTTTCACTGA CACTTGACTGGGTTGCATTGACGCTTGGCTTATCATCTACAAGCAAGTAA AGTAACTTTACCAGGCTTTAGAAGGTTTTTTCTCAAACATAGGGTGTAAA ACTCAGAGTGTCTGAGGAATAGAATATTTGTCAAGATTTTTAAGGCGGAT TCATTTTCAGGTTTTTCTATCATAGGGTAGCTGCAGATTATTTGAAGAGA GTCTCAGCCCAGCTGGCACACAGCGTTGTTTTAACGTTCATCTAACGTTA TATGGACGTTGTGAACGTTATATAAACGTTGAAAGAACGTTGTGTGCCAG CTGGGAGGTTGTTAAAGATTGTTCATTTCCAAGAATCCTGTAGAAATCAT CCTATAACTGCTATAGAACTACTATTTGAATGAAATTAAGTTGAGAGTCA AGGAAAGCTAGAGAGCTTTATTTGAATAAGGACTACCTGCGTAAAACCTT ACAGTAGAATCAAAATAGCGATTTAACATCGAGGTGATAATGATTCTCTA ATTCGGACCTCTCTTTTTGTTATTTGAAATAAAATATTGGTCCCCTCAGA CTTGAGCTTCAAATAAAATAATCTCCTTAATTAGTATCGTTCTCAAAGAA GCCTTGGTCCCTTGAAGATCGAAATAGAGAGAGAGTTGACTGAAGATATA GAGCAATATTCTAACAGTGTGGTAAAGGTGATTTAATCTTTCGTTTGTTT ATTTCAGGGGTCTGGTACGAGCAAGAAAGGAAACTTAGTCATCACCAGCT GTTGTGGCAACAAAGGAGAAGACAGGACAACCTCCTCAACAAGTATACGA CAATTAAAACAAGTAGCACCTGTCGCACAACACCAAAATCCTCCTAAAGA AGGAAGGAATTCATCTACTGACAACACGTAAGTGAAAATTGATGTTTTAG TAAGCTGTACTAAATTGAAATTCGCAAAAAGTTTTGCCAAATTATTTGAT ATCTTTAATACCCTATCAGCCATATCACATGTTAACAAGTGTATAATTGT GGTTCTCTTAATTTAGATTACTTTAAATATCAGGTGAGTCGTTACCTATT ATAAATGTAGAAAGTTAGAGAAAGTCAATATATTACTCATTTCTTTATAC AAAGGAAAATTGAAGTTATTTCAGGGCCCTTAATAGGCGCCAAAGGCGAT TTGGTTATAGTTTTTAAAAAGAAAAATGATGTTTGTTTTGTTTTAGAAGC TTTAACATAGATTTTAAAGTTCTTGAAAACAAATATAAAGTTGTAAGTCA AAACAAACAAAACCGAAACATGAATGAGAGGTTGACTTGAAAAACAAATT TAGCAGGGACATGGAAAGTAACACAACCTGACGAACCAATTATGACCTAG AGAGCTCGGGTTGTTTTATTGTTGGTAGAAATATACTTTAATGGGTTCAT GGCAATATCAAATCAAAAGTTATTGTGAGCAAACAGTGGAAATAGATTAT TCTGAACAAAATTTACATTCTATTGAATTAGCTGGGTCCTACTTATTTAC ATAATCAGACATAATTCAAATTTTATTTAAATCAACTTAAAAGAATAACC AGAGAGAAAGTTTGAGATCTGCTTTTGGACTAAAGAAACCCTCTGTGAAA CCCTCGAAATATTTTGGCCAAACTTCTTCCAAATTTGAGATTATGAAAAT TTGAAATCTCTAAAAAGGAAACTAAAAGTGGATTCTTTTATAACTCAAAC GTTCAAAAATTCTATTGTTTTCTCTGATTTTCTAGCTAATACTTTAGTAT TTCGATTTGAGAAAAAAAATTAGGAAGAAATCGGTGGTGGACCATGAAAG GAATTTATAGACCAAAAGTCTTTATTTAACCATCTGACTATAAATAACTT TCATAAATTAAACTTACTTTAAGGGAACTAATTTTTGTGGGTGTTAATTT TCACTTTTTTCGCAGTTTTTGTCAGCAGAGAGATGCAAAATAATGTCATG GTGGTTGTGCTAGAAAATGGACCATTCTTTGCATTATGGTAAATATTTTG GAAAGGCCATTAGAAAAACCAATCGAAACTAACTGGATTAAACTGAACTG AAACTGTCAACAACTGCCCCTTCATTTTATTTTTTATCAAAGGAGCAAAA CTATTATGAAATATTTATCAATTTGATCAGATTTTATCAAAAAATAAATT AACTGTAGTTTTTTTTTCGAGGTTGACAGATACAGAAAGGTTATGAATTT AATCTGATTTACAATAAAAAGGAGTTTTTTTTTAAAGAAATAAAAAAATG TAGAAAACTGTAGAAAAATGAATTTCAATGTATTTTGGAGGAGCAATGAG GCAAGTCATGACAACTGATACATACAGCAGTGCTGAATCGTTATTTGCAA AGTGTTGAAACATAATGGGTGACTTTGGGTGTTGCCAATGTCTATAAGGA CATAGCTCGCAGAGATTTTTCTAAGCCCTTTTAGCTAGGGCCGTTTTTGT AAAATTTAGATCGAGTTTCTAATTGCTCAGCGAAGCTGTGCACTGATAAA GCTGGTGGTCCCATTGGGTCCAGGGAAAAGCCCTGGTGGAGATTCAGAGG GTGAAACTCCCGAAAGATTTTAAATAAGTAGATGATATCATTTATTTTTC TCTTGTGAACAACAAAAAGTTAAATTTTGTTAGAAAATTTTGGATCGAGT TTCAAAAGTCTTTGATTTGTTATTTTGGCCGGTATACAAACATAAAAAAG TGCTTAGAAAAAAATAATGATTCCATGTGGGTGGGACAAAATGTCTGATC AGGGTTGCTTTGGCTTGAAAATCATTATTTTTGTGTCTGACAAGGAGCAA TGTCCGACCGTTATTACTCTTTGAATTTGGTCTCAGTATTAAAAAAAAGT TAGGAAAACTTTGAAAGTGAAATTAAGATCCTATTTCTTTAAACCCACCA CAGAACAAATGTAAATGTAAATTCATAGCAGGATTAAAAGCCATCAAGAA ATTTCTTTTGATAGCTCAAGGGATATCCTCTTAAAAAACTTAAGCACCCA ACACAACAATCACTTTTATTAATGACTTTTTAATTAATGAGAAATCCTGT TGTGTTTTAATGAAAACATGATACGTTCATAGTTGTTTTAGGCCTGTGGT TTTTTTCATATTGTAGATGTAATATACAGTTTAGATAGGGTGCAAATTAT GAAGCAGAACTATGATAGAAATGATGAATTTTTTCAATAAACTCATCAAA TGAATTGGAAGAAGTTTTCATAGAGAATTCATGTTCTTTTTCTTTAATTT CACCACTTTAGAGTATCCAAGAAAGTTGACAAGGTGGGAGAAATGGTAAA AGGAAAGTTAGAAAGATTCTGAGATTTATGAGTGTTTTTGAAAAAATAAG GGCTCGTTTTACAAAATGATGAAATAAGTTATAATTTTGGTGAGTTAGCA ATTTTTTGATTTTATTGATAATTTGCTAATTTTCGCAAATTTTGCTTGAA GAAAGTAGTTCCCCCCAAATTATACCTTTTGAGGTATTATTCACTAGGTT AAGCAAACGAAAACAATGAAAGGAAAGTGTCACAAAGTCTTCTGAATTTT TTTGAGAACCTAATCATTTTGATAAATGATATATTCATTTTAGATGAAAA TCTTTAAAAAAATCTTTTTTGCTGGAAGCAGGTTAACATTTTCTGAAATT AGCACTCCCAAAAATATCCTGTTACAGAAGTGTATTCATCAAACTTCTTC TGTTTTCAATTGTATGTATTTTTCCTTTGAAGAGGTAGACTTTCTTATTT TTTCAAATCAAGTAAAATTACATATTAATGACCAGAGATCCGTTGAATGC ATTCATTTTGCCAACAAATTTTCATGAAAAATTTAACAGGAAAATTGTTA AAAATCTGAATTTTTAATTTTCAAGCAAAGGATTTTCACAATATTGGATT TATTCAGAAAATTGATACTTCGTTCAGTAACTTTGAATCTCATGATTATA ATCTTTTCTTCAAATTCTTTTAGTAATTATCTTATTTTTCATTTGAAACT TCAGATAACGCCATATTAATTTTTTAGCTTGTGAAAACACTATATTAATT TTTTAGCTTGTGAAGTGTGAAGTTGTAAAAAATAAGTTTACAAAAAATAT TAAATATTGCCTAGAAACTTTTCCAGGCAAGACCAATCTGATAGCTTTTG AAGTGTGAAGTTGTAAAATAAGTTTACAGTATAAAAAAATATGAAATATC TTTATTTGAAACATTTCAAATATCTAAGAAACTGTTGATGAACTTCTCAC TTTCTGCAAGTCATTCCCTTCAATAAAAACATTTAAGTAAAGTAATTTCA AATCTATCAAATCAAACTGACTACAAGTCTCAACGTAAAGGGTTATGTTT GCTAAAATTATTTTTATTCAGGGTTTGAATGAAATCCAGGTTTTTCTACA TAAAATTCATAAAAGAATATAACAAAATTGATACATAATTTTGTGACATT TTCTTTTTGTTGTTTTCTGAATTGTTTTTAATCCAGAAAAATTCAATACA AGTGCATTAGCTAAGGGCAAAATTTCAAAGTTCATAATTCGAGTGCAATA TTCCTTGCTTGAAGAATGAAACCAGTTCCTAGAAGAGTTGTGCTAGAACC AGCTTTTTCAGACTTGGAAACTTTTACCTAAGAGCACAATGAGTGGTAAA AGTTTTATGAAACAGTTTGATAATATCCCACTCAGGCACAAAGTATAACA ATCTTAAAAGGAACATATCAAAAAAGTTTGAACCATCTGAAATACAAGCT AAGTTGAAATTAACACAAAATCTCCTTTTTCTGTTTGCAGGCAAAATATC ATCAACGTCAAACCAATACCAGAAGAACACAAAATGGGATCCGAAAGCTT TTACATTGAGATCAACTTCAACTATGGCAAATTATCCTACACCACGTTTT GGCGTGCTTGGGAAAAAGATGCTGGCTTGAGAGACGCCATGCAACAAGGA GTCATCACAAATCTGCTCAAAGTATCCGGCGAAAACAAATTAATCATGAT TGTAAAAATCAGCGGAGATCTACTGGACAATTTACTATATTCCAAAATCC AAGTCATTGCTTATTATGCAGATTTGATGAAAATCTCAGTCACGCCGACA TATGATTATGAATCATTTGCTAATATAGTGAATACTATTACTCAAGTGGA GGAAACTTTTGAACAATTACCCTCTTTAGATCAAAATACAGGTCTTTTCC ATATCTTGGATATTAAAATGGAGTTCAGAGGTATGACACAAGAGGATTTT CTCACCATCTGGAAAGAGGAAATCAAAGCAGCGCTTGGAGCTAAAGAAAA AGGCATTGCATTGGACATATTGAAATCAGTAGCAGAAAGACGTGTTTTTG TTTTGACACGTGTAGACTCTTTAGCCTTATTAGACACTATTATTCTTACG CTACCAATGATGAGGAAAATGGGAGACCAGATGTATATCACATCTAAACG TGTTTCAAAATTCAATACCTTCATCAAACAAATCAATTAAAAGCAACTGA GAAAAAATTTCTTTCTCCAATTTTTGAATGTCTACGCCATTGAAACGAGA TTAAACAAGATATTGAAGTCAAAACAGACTAGGACCGCAAACAGAATGAT AAACTTTGTGGAAAGAAGTTGACTATATCTAGAATTTTTATTACAAACTG AAGAACCTTTGTTCTATTTACATTTTAAAAGATTTTTTCATGCTCCCTGC AATCTAGCTAGGTTAGTATATTGAAGTTTATCTTACAAAATAACTTCAAA AATGAAAAATATTTATTACTTAAAATTTATAAGACTTTTTGTGAGCTAAC ATTCCCAAATTGTGAAGTTGTGAATATTTTATCATTATAATATAGAAATG TCTTAGTGTATCATAATATAATATTTATCCATTTGTCGTCCATTTATAAA ATTGGACAGTGTTTTGTACAAGGAAATGAGTGTAACAATGTCAGTCCTAA ACATTCTCATATATCATTTTGTCATTCAATTTGGGCCAGAATTTCGGAAA TTCTTCTTGGATTTTAGTTCGTCCACCCTCACTTTAAGATATGAATAGAA TCTTTCCAAGGGTATTTTTGCAAAATTTGCCATTTTCCAGGAAGTATCCA CTTATTTTCAATAATATTTTTTTGACTTGAAAAGGTTCGTCCACCCCCTT GTATGGTTTTTTAAAAGACTCCAAAGTCTCTCCAGAAGCTAAGATAAAAA AGATCTAAAAGAAAGGCTGTGATCAAATCCATTTTGTGTTTGTATAGAAT GGGTAAACTTTTAATGTTTAAACTAAGAACGAAACTTGATAGCACCTTAA GTCTGTGTTTACGTGTCTATTTTTTCAAAATCACTTACAGACGGC

Coding sequence (CDS) from alignment at sc0000703:128176..139520-

>TCONS_00028775 ID=TCONS_00028775|Name=TCONS_00028775|organism=Clytia hemisphaerica|type=CDS|length=2619bp|location=Sequence derived from alignment at sc0000703:128176..139520- (Clytia hemisphaerica)
GCAAAATATCATCAACGTCAAACCAATACCAGAAGAACACAAAATGGGAT
CCGAAAGCTTTTACATTGAGATCAACTTCAACTATGGCAAATTATCCTAC
ACCACGTTTTGGCGTGCTTGGGAAAAAGATGCTGGCTTGAGAGACGCCAT
GCAACAAGGAGTCATCACAAATCTGCTCAAAGTATCCGGCGAAAACAAAT
TAATCATGATTGTAAAAATCAGCGGAGATCTACTGGACAATTTACTATAT
TCCAAAATCCAAGTCATTGCTTATTATGCAGATTTGATGAAAATCTCAGT
CACGCCGACATATGATTATGAATCATTTGCTAATATAGTGAATACTATTA
CTCAAGTGGAGGAAACTTTTGAACAATTACCCTCTTTAGATCAAAATACA
GGTCTTTTCCATATCTTGGATATTAAAATGGAGTTCAGAGGTATGACACA
AGAGGATTTTCTCACCATCTGGAAAGAGGAAATCAAAGCAGCGCTTGGAG
CTAAAGAAAAAGGCATTGCATTGGACATATTGAAATCAGTAGCAGAAAGA
CGTGTTTTTGTTTTGACACGTGTAGACTCTTTAGCCTTATTAGACACTAT
TATTCTTACGCTACCAATGATGAGGAAAATGGGAGACCAGATGTATATCA
CATCTAAACGTGTTTCAAAATTCAATACCTTCATCAAACAAATCAATTAA
GGGTCTGGTACGAGCAAGAAAGGAAACTTAGTCATCACCAGCTGTTGTGG
CAACAAAGGAGAAGACAGGACAACCTCCTCAACAAGTATACGACAATTAA
AACAAGTAGCACCTGTCGCACAACACCAAAATCCTCCTAAAGAAGGAAGG
AATTCATCTACTGACAACACATGGCAAAATATCATCAACGTCAAACCAAT
ACCAGAAGAACACAAAATGGGATCCGAAAGCTTTTACATTGAGATCAACT
TCAACTATGGCAAATTATCCTACACCACGTTTTGGCGTGCTTGGGAAAAA
GATGCTGGCTTGAGAGACGCCATGCAACAAGGAGTCATCACAAATCTGCT
CAAAGTATCCGGCGAAAACAAATTAATCATGATTGTAAAAATCAGCGGAG
ATCTACTGGACAATTTACTATATTCCAAAATCCAAGTCATTGCTTATTAT
GCAGATTTGATGAAAATCTCAGTCACGCCGACATATGATTATGAATCATT
TGCTAATATAGTGAATACTATTACTCAAGTGGAGGAAACTTTTGAACAAT
TACCCTCTTTAGATCAAAATACAGGTCTTTTCCATATCTTGGATATTAAA
ATGGAGTTCAGAGGTATGACACAAGAGGATTTTCTCACCATCTGGAAAGA
GGAAATCAAAGCAGCGCTTGGAGCTAAAGAAAAAGGCATTGCATTGGACA
TATTGAAATCAGTAGCAGAAAGACGTGTTTTTGTTTTGACACGTGTAGAC
TCTTTAGCCTTATTAGACACTATTATTCTTACGCTACCAATGATGAGGAA
AATGGGAGACCAGATGTATATCACATCTAAACGTGTTTCAAAATTCAATA
CCTTCATCAAACAAATCAATTAAGGGTCTGGTACGAGCAAGAAAGGAAAC
TTAGTCATCACCAGCTGTTGTGGCAACAAAGGAGAAGACAGGACAACCTC
CTCAACAAGTATACGACAATTAAAACAAGTAGCACCTGTCGCACAACACC
AAAATCCTCCTAAAGAAGGAAGGAATTCATCTACTGACAACACATGGCAA
AATATCATCAACGTCAAACCAATACCAGAAGAACACAAAATGGGATCCGA
AAGCTTTTACATTGAGATCAACTTCAACTATGGCAAATTATCCTACACCA
CGTTTTGGCGTGCTTGGGAAAAAGATGCTGGCTTGAGAGACGCCATGCAA
CAAGGAGTCATCACAAATCTGCTCAAAGTATCCGGCGAAAACAAATTAAT
CATGATTGTAAAAATCAGCGGAGATCTACTGGACAATTTACTATATTCCA
AAATCCAAGTCATTGCTTATTATGCAGATTTGATGAAAATCTCAGTCACG
CCGACATATGATTATGAATCATTTGCTAATATAGTGAATACTATTACTCA
AGTGGAGGAAACTTTTGAACAATTACCCTCTTTAGATCAAAATACAGGTC
TTTTCCATATCTTGGATATTAAAATGGAGTTCAGAGGTATGACACAAGAG
GATTTTCTCACCATCTGGAAAGAGGAAATCAAAGCAGCGCTTGGAGCTAA
AGAAAAAGGCATTGCATTGGACATATTGAAATCAGTAGCAGAAAGACGTG
TTTTTGTTTTGACACGTGTAGACTCTTTAGCCTTATTAGACACTATTATT
CTTACGCTACCAATGATGAGGAAAATGGGAGACCAGATGTATATCACATC
TAAACGTGTTTCAAAATTCAATACCTTCATCAAACAAATCAATTAAGGGT
CTGGTACGAGCAAGAAAGGAAACTTAGTCATCACCAGCTGTTGTGGCAAC
AAAGGAGAAGACAGGACAACCTCCTCAACAAGTATACGACAATTAAAACA
AGTAGCACCTGTCGCACAACACCAAAATCCTCCTAAAGAAGGAAGGAATT
CATCTACTGACAACACATG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_016317XLOC_016317Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00028775-proteinTCONS_00028775-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00028775-exon-sc0000703-1575043694:139318..139520TCONS_00028775-exon-sc0000703-1575043694:139318..139520Clytia hemisphaericaexon
TCONS_00028775-exon-sc0000703-1575043694:133644..133813TCONS_00028775-exon-sc0000703-1575043694:133644..133813Clytia hemisphaericaexon
TCONS_00028775-exon-sc0000703-1575043694:128176..129730TCONS_00028775-exon-sc0000703-1575043694:128176..129730Clytia hemisphaericaexon
TCONS_00028775-exon-sc0000703-1510915933:139318..139520TCONS_00028775-exon-sc0000703-1510915933:139318..139520Clytia hemisphaericaexon
TCONS_00028775-exon-sc0000703-1510915933:133644..133813TCONS_00028775-exon-sc0000703-1510915933:133644..133813Clytia hemisphaericaexon
TCONS_00028775-exon-sc0000703-1510915933:128176..129730TCONS_00028775-exon-sc0000703-1510915933:128176..129730Clytia hemisphaericaexon
TCONS_00028775-exon-sc0000703-1491911889:139318..139520TCONS_00028775-exon-sc0000703-1491911889:139318..139520Clytia hemisphaericaexon
TCONS_00028775-exon-sc0000703-1491911889:133644..133813TCONS_00028775-exon-sc0000703-1491911889:133644..133813Clytia hemisphaericaexon
TCONS_00028775-exon-sc0000703-1491911889:128176..129730TCONS_00028775-exon-sc0000703-1491911889:128176..129730Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000703supercontigsc0000703:128176..139520 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.289157 0.160614 0.276113 0.0809119 0 1.52425 2.1808 2.95602 8.65293 7.1591 8.44846 6.26326 14.8681 10.1454 0.134332 0 4.26666 1.99029 25.5464 24.4274 4.45164 0.243216 1.71023 0.703527 2.85726 3.53252 6.08699e-10 0.201835 0.390657 0.472517
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR026029MLI_dom
IPR011008Dimeric_a/b-barrel
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00028775 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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