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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00028774 ID=TCONS_00028774|Name=TCONS_00028774|organism=Clytia hemisphaerica|type=transcript|length=1898bp
CTGTGATTCCCCCTTTTTGATAAATCTGAGAGCTTGCTGTTaattatgaa
attaatatttaTTATACTAAACGTTGTATAAGCTTAgtattatatttttt
aactGGAAAATCTATTCTACATTTTCACTGACACTTGACTGGGTTGCATT
GACGCTTGGCTTATCATCTACAAGGGTCTGGTACGAGCAAGAAAGGAAAC
TTAGTCATCACCAGCTGTTGTGGCAACAAAGGAGAAGACAGGACAACCTC
CTCAACAAGTATACGACAATTAAAACAAGTAGCACCTGTCGCACAACACC
AAAATCCTCCTAAAGAAGGAAGGAATTCATCTACTGACAACACGCAAAAT
ATCATCAACGTCAAACCAATACCAGAAGAACACAAAATGGGATCCGAAAG
CTTTTACATTGAGATCAACTTCAACTATGGCAAATTATCCTACACCACGT
TTTGGCGTGCTTGGGAAAAAGATGCTGGCTTGAGAGACGCCATGCAACAA
GGAGTCATCACAAATCTGCTCAAAGTATCCGGCGAAAACAAATTAATCAT
GATTGTAAAAATCAGCGGAGATCTACTGGACAATTTACTATATTCCAAAA
TCCAAGTCATTGCTTATTATGCAGATTTGATGAAAATCTCAGTCACGCCG
ACATATGATTATGAATCATTTGCTAATATAGTGAATACTATTACTCAAGT
GGAGGAAACTTTTGAACAATTACCCTCTTTAGATCAAAATACAGGTCTTT
TCCATATCTTGGATATTAAAATGGAGTTCAGAGGTATGACACAAGAGGAT
TTTCTCACCATCTGGAAAGAGGAAATCAAAGCAGCGCTTGGAGCTAAAGA
AAAAGGCATTGCATTGGACATATTGAAATCAGTAGCAGAAAGacgtgttt
ttgttttgacaCGTGTAGACTCTTTAGCCTTATTAGACACTATTATTCTT
ACGCTACCAATGATGAGGAAAATGGGAGACCAGATGTATATCACATCTAA
ACgtgtttcaaaattcaataccTTCATCAAACAAATCAATTAAAAGCAAC
tgagaaaaaatttctttctccaATTTTTGAATGTCTACGCCATTGAAACG
AGATTAAACAAGATATTGAAGTCAAAACAGACTAGGACCGCAAACAGAAT
GATAAACTTTGTGGAAAGAAGTTGACTATATCTAgaatttttattacaaa
ctgAAGAACCTTTGTTCTATTtacattttaaaagattttttcatgcTCCC
TGCAATCTAGCTAGGTTAGTATATTGAAGTTTATCTTACAAAATaacttc
aaaaatgaaaaatatttattacttAAAATTTATAAGACTTTTTGTGAGCT
AACATTCCCAAATTGTGAAGTTGTGAATATTTTATCATTATAATATAGAA
ATGTCTTAGTGTATCATAATATAATATTTATCCATTTGTCGTCCATTTAT
AAAATTGGACAGTGTTTTGTACAAGGAAATGAGTGTAACAATGTCAGTCC
TAAACATTCTCATATatcattttgtcattcaatttgGGCCAGAATTTCGG
AAATTCTTCTtggattttagttcgtccaccctcactttaagatatgaata
gaatctttccaagggtatttttgcaaaatttgccattttccaggaaGTAT
CCacttattttcaataatatttttttgacttgaaaaggttcgtccacccc
cttgtATGGTTTTTTAAAAGACTCCAAAGTCTCTCCAGAAGCTAAGATAA
AAAAGATCTAAAAGAAAGGCTGTGATCAAATCCATTTTGTGTTTGTATAG
AATGGGTAAACTTTTAATGTTTAAACTAAGAACGAAACTTGATAGCACCT
TAAGTCTGTGTTTACGtgtctattttttcaaaatcacttACAGACGGC Run BLAST on NCBI transcript from alignment at sc0000703:128176..134651- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00028774 ID=TCONS_00028774|Name=TCONS_00028774|organism=Clytia hemisphaerica|type=transcript|length=6476bp|location=Sequence derived from alignment at sc0000703:128176..134651- (Clytia hemisphaerica)
CTGTGATTCCCCCTTTTTGATAAATCTGAGAGCTTGCTGTTAATTATGAA
ATTAATATTTATTATACTAAACGTTGTATAAGCTTAGTATTATATTTTTT
AACTGGAAAATCTATTCTACATTTTCACTGACACTTGACTGGGTTGCATT
GACGCTTGGCTTATCATCTACAAGCAAGTAAAGTAACTTTACCAGGCTTT
AGAAGGTTTTTTCTCAAACATAGGGTGTAAAACTCAGAGTGTCTGAGGAA
TAGAATATTTGTCAAGATTTTTAAGGCGGATTCATTTTCAGGTTTTTCTA
TCATAGGGTAGCTGCAGATTATTTGAAGAGAGTCTCAGCCCAGCTGGCAC
ACAGCGTTGTTTTAACGTTCATCTAACGTTATATGGACGTTGTGAACGTT
ATATAAACGTTGAAAGAACGTTGTGTGCCAGCTGGGAGGTTGTTAAAGAT
TGTTCATTTCCAAGAATCCTGTAGAAATCATCCTATAACTGCTATAGAAC
TACTATTTGAATGAAATTAAGTTGAGAGTCAAGGAAAGCTAGAGAGCTTT
ATTTGAATAAGGACTACCTGCGTAAAACCTTACAGTAGAATCAAAATAGC
GATTTAACATCGAGGTGATAATGATTCTCTAATTCGGACCTCTCTTTTTG
TTATTTGAAATAAAATATTGGTCCCCTCAGACTTGAGCTTCAAATAAAAT
AATCTCCTTAATTAGTATCGTTCTCAAAGAAGCCTTGGTCCCTTGAAGAT
CGAAATAGAGAGAGAGTTGACTGAAGATATAGAGCAATATTCTAACAGTG
TGGTAAAGGTGATTTAATCTTTCGTTTGTTTATTTCAGGGGTCTGGTACG
AGCAAGAAAGGAAACTTAGTCATCACCAGCTGTTGTGGCAACAAAGGAGA
AGACAGGACAACCTCCTCAACAAGTATACGACAATTAAAACAAGTAGCAC
CTGTCGCACAACACCAAAATCCTCCTAAAGAAGGAAGGAATTCATCTACT
GACAACACGTAAGTGAAAATTGATGTTTTAGTAAGCTGTACTAAATTGAA
ATTCGCAAAAAGTTTTGCCAAATTATTTGATATCTTTAATACCCTATCAG
CCATATCACATGTTAACAAGTGTATAATTGTGGTTCTCTTAATTTAGATT
ACTTTAAATATCAGGTGAGTCGTTACCTATTATAAATGTAGAAAGTTAGA
GAAAGTCAATATATTACTCATTTCTTTATACAAAGGAAAATTGAAGTTAT
TTCAGGGCCCTTAATAGGCGCCAAAGGCGATTTGGTTATAGTTTTTAAAA
AGAAAAATGATGTTTGTTTTGTTTTAGAAGCTTTAACATAGATTTTAAAG
TTCTTGAAAACAAATATAAAGTTGTAAGTCAAAACAAACAAAACCGAAAC
ATGAATGAGAGGTTGACTTGAAAAACAAATTTAGCAGGGACATGGAAAGT
AACACAACCTGACGAACCAATTATGACCTAGAGAGCTCGGGTTGTTTTAT
TGTTGGTAGAAATATACTTTAATGGGTTCATGGCAATATCAAATCAAAAG
TTATTGTGAGCAAACAGTGGAAATAGATTATTCTGAACAAAATTTACATT
CTATTGAATTAGCTGGGTCCTACTTATTTACATAATCAGACATAATTCAA
ATTTTATTTAAATCAACTTAAAAGAATAACCAGAGAGAAAGTTTGAGATC
TGCTTTTGGACTAAAGAAACCCTCTGTGAAACCCTCGAAATATTTTGGCC
AAACTTCTTCCAAATTTGAGATTATGAAAATTTGAAATCTCTAAAAAGGA
AACTAAAAGTGGATTCTTTTATAACTCAAACGTTCAAAAATTCTATTGTT
TTCTCTGATTTTCTAGCTAATACTTTAGTATTTCGATTTGAGAAAAAAAA
TTAGGAAGAAATCGGTGGTGGACCATGAAAGGAATTTATAGACCAAAAGT
CTTTATTTAACCATCTGACTATAAATAACTTTCATAAATTAAACTTACTT
TAAGGGAACTAATTTTTGTGGGTGTTAATTTTCACTTTTTTCGCAGTTTT
TGTCAGCAGAGAGATGCAAAATAATGTCATGGTGGTTGTGCTAGAAAATG
GACCATTCTTTGCATTATGGTAAATATTTTGGAAAGGCCATTAGAAAAAC
CAATCGAAACTAACTGGATTAAACTGAACTGAAACTGTCAACAACTGCCC
CTTCATTTTATTTTTTATCAAAGGAGCAAAACTATTATGAAATATTTATC
AATTTGATCAGATTTTATCAAAAAATAAATTAACTGTAGTTTTTTTTTCG
AGGTTGACAGATACAGAAAGGTTATGAATTTAATCTGATTTACAATAAAA
AGGAGTTTTTTTTTAAAGAAATAAAAAAATGTAGAAAACTGTAGAAAAAT
GAATTTCAATGTATTTTGGAGGAGCAATGAGGCAAGTCATGACAACTGAT
ACATACAGCAGTGCTGAATCGTTATTTGCAAAGTGTTGAAACATAATGGG
TGACTTTGGGTGTTGCCAATGTCTATAAGGACATAGCTCGCAGAGATTTT
TCTAAGCCCTTTTAGCTAGGGCCGTTTTTGTAAAATTTAGATCGAGTTTC
TAATTGCTCAGCGAAGCTGTGCACTGATAAAGCTGGTGGTCCCATTGGGT
CCAGGGAAAAGCCCTGGTGGAGATTCAGAGGGTGAAACTCCCGAAAGATT
TTAAATAAGTAGATGATATCATTTATTTTTCTCTTGTGAACAACAAAAAG
TTAAATTTTGTTAGAAAATTTTGGATCGAGTTTCAAAAGTCTTTGATTTG
TTATTTTGGCCGGTATACAAACATAAAAAAGTGCTTAGAAAAAAATAATG
ATTCCATGTGGGTGGGACAAAATGTCTGATCAGGGTTGCTTTGGCTTGAA
AATCATTATTTTTGTGTCTGACAAGGAGCAATGTCCGACCGTTATTACTC
TTTGAATTTGGTCTCAGTATTAAAAAAAAGTTAGGAAAACTTTGAAAGTG
AAATTAAGATCCTATTTCTTTAAACCCACCACAGAACAAATGTAAATGTA
AATTCATAGCAGGATTAAAAGCCATCAAGAAATTTCTTTTGATAGCTCAA
GGGATATCCTCTTAAAAAACTTAAGCACCCAACACAACAATCACTTTTAT
TAATGACTTTTTAATTAATGAGAAATCCTGTTGTGTTTTAATGAAAACAT
GATACGTTCATAGTTGTTTTAGGCCTGTGGTTTTTTTCATATTGTAGATG
TAATATACAGTTTAGATAGGGTGCAAATTATGAAGCAGAACTATGATAGA
AATGATGAATTTTTTCAATAAACTCATCAAATGAATTGGAAGAAGTTTTC
ATAGAGAATTCATGTTCTTTTTCTTTAATTTCACCACTTTAGAGTATCCA
AGAAAGTTGACAAGGTGGGAGAAATGGTAAAAGGAAAGTTAGAAAGATTC
TGAGATTTATGAGTGTTTTTGAAAAAATAAGGGCTCGTTTTACAAAATGA
TGAAATAAGTTATAATTTTGGTGAGTTAGCAATTTTTTGATTTTATTGAT
AATTTGCTAATTTTCGCAAATTTTGCTTGAAGAAAGTAGTTCCCCCCAAA
TTATACCTTTTGAGGTATTATTCACTAGGTTAAGCAAACGAAAACAATGA
AAGGAAAGTGTCACAAAGTCTTCTGAATTTTTTTGAGAACCTAATCATTT
TGATAAATGATATATTCATTTTAGATGAAAATCTTTAAAAAAATCTTTTT
TGCTGGAAGCAGGTTAACATTTTCTGAAATTAGCACTCCCAAAAATATCC
TGTTACAGAAGTGTATTCATCAAACTTCTTCTGTTTTCAATTGTATGTAT
TTTTCCTTTGAAGAGGTAGACTTTCTTATTTTTTCAAATCAAGTAAAATT
ACATATTAATGACCAGAGATCCGTTGAATGCATTCATTTTGCCAACAAAT
TTTCATGAAAAATTTAACAGGAAAATTGTTAAAAATCTGAATTTTTAATT
TTCAAGCAAAGGATTTTCACAATATTGGATTTATTCAGAAAATTGATACT
TCGTTCAGTAACTTTGAATCTCATGATTATAATCTTTTCTTCAAATTCTT
TTAGTAATTATCTTATTTTTCATTTGAAACTTCAGATAACGCCATATTAA
TTTTTTAGCTTGTGAAAACACTATATTAATTTTTTAGCTTGTGAAGTGTG
AAGTTGTAAAAAATAAGTTTACAAAAAATATTAAATATTGCCTAGAAACT
TTTCCAGGCAAGACCAATCTGATAGCTTTTGAAGTGTGAAGTTGTAAAAT
AAGTTTACAGTATAAAAAAATATGAAATATCTTTATTTGAAACATTTCAA
ATATCTAAGAAACTGTTGATGAACTTCTCACTTTCTGCAAGTCATTCCCT
TCAATAAAAACATTTAAGTAAAGTAATTTCAAATCTATCAAATCAAACTG
ACTACAAGTCTCAACGTAAAGGGTTATGTTTGCTAAAATTATTTTTATTC
AGGGTTTGAATGAAATCCAGGTTTTTCTACATAAAATTCATAAAAGAATA
TAACAAAATTGATACATAATTTTGTGACATTTTCTTTTTGTTGTTTTCTG
AATTGTTTTTAATCCAGAAAAATTCAATACAAGTGCATTAGCTAAGGGCA
AAATTTCAAAGTTCATAATTCGAGTGCAATATTCCTTGCTTGAAGAATGA
AACCAGTTCCTAGAAGAGTTGTGCTAGAACCAGCTTTTTCAGACTTGGAA
ACTTTTACCTAAGAGCACAATGAGTGGTAAAAGTTTTATGAAACAGTTTG
ATAATATCCCACTCAGGCACAAAGTATAACAATCTTAAAAGGAACATATC
AAAAAAGTTTGAACCATCTGAAATACAAGCTAAGTTGAAATTAACACAAA
ATCTCCTTTTTCTGTTTGCAGGCAAAATATCATCAACGTCAAACCAATAC
CAGAAGAACACAAAATGGGATCCGAAAGCTTTTACATTGAGATCAACTTC
AACTATGGCAAATTATCCTACACCACGTTTTGGCGTGCTTGGGAAAAAGA
TGCTGGCTTGAGAGACGCCATGCAACAAGGAGTCATCACAAATCTGCTCA
AAGTATCCGGCGAAAACAAATTAATCATGATTGTAAAAATCAGCGGAGAT
CTACTGGACAATTTACTATATTCCAAAATCCAAGTCATTGCTTATTATGC
AGATTTGATGAAAATCTCAGTCACGCCGACATATGATTATGAATCATTTG
CTAATATAGTGAATACTATTACTCAAGTGGAGGAAACTTTTGAACAATTA
CCCTCTTTAGATCAAAATACAGGTCTTTTCCATATCTTGGATATTAAAAT
GGAGTTCAGAGGTATGACACAAGAGGATTTTCTCACCATCTGGAAAGAGG
AAATCAAAGCAGCGCTTGGAGCTAAAGAAAAAGGCATTGCATTGGACATA
TTGAAATCAGTAGCAGAAAGACGTGTTTTTGTTTTGACACGTGTAGACTC
TTTAGCCTTATTAGACACTATTATTCTTACGCTACCAATGATGAGGAAAA
TGGGAGACCAGATGTATATCACATCTAAACGTGTTTCAAAATTCAATACC
TTCATCAAACAAATCAATTAAAAGCAACTGAGAAAAAATTTCTTTCTCCA
ATTTTTGAATGTCTACGCCATTGAAACGAGATTAAACAAGATATTGAAGT
CAAAACAGACTAGGACCGCAAACAGAATGATAAACTTTGTGGAAAGAAGT
TGACTATATCTAGAATTTTTATTACAAACTGAAGAACCTTTGTTCTATTT
ACATTTTAAAAGATTTTTTCATGCTCCCTGCAATCTAGCTAGGTTAGTAT
ATTGAAGTTTATCTTACAAAATAACTTCAAAAATGAAAAATATTTATTAC
TTAAAATTTATAAGACTTTTTGTGAGCTAACATTCCCAAATTGTGAAGTT
GTGAATATTTTATCATTATAATATAGAAATGTCTTAGTGTATCATAATAT
AATATTTATCCATTTGTCGTCCATTTATAAAATTGGACAGTGTTTTGTAC
AAGGAAATGAGTGTAACAATGTCAGTCCTAAACATTCTCATATATCATTT
TGTCATTCAATTTGGGCCAGAATTTCGGAAATTCTTCTTGGATTTTAGTT
CGTCCACCCTCACTTTAAGATATGAATAGAATCTTTCCAAGGGTATTTTT
GCAAAATTTGCCATTTTCCAGGAAGTATCCACTTATTTTCAATAATATTT
TTTTGACTTGAAAAGGTTCGTCCACCCCCTTGTATGGTTTTTTAAAAGAC
TCCAAAGTCTCTCCAGAAGCTAAGATAAAAAAGATCTAAAAGAAAGGCTG
TGATCAAATCCATTTTGTGTTTGTATAGAATGGGTAAACTTTTAATGTTT
AAACTAAGAACGAAACTTGATAGCACCTTAAGTCTGTGTTTACGTGTCTA
TTTTTTCAAAATCACTTACAGACGGC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00028774-exon-sc0000703-1575043694:134479..134651 | TCONS_00028774-exon-sc0000703-1575043694:134479..134651 | Clytia hemisphaerica | exon |
| TCONS_00028774-exon-sc0000703-1575043694:133644..133813 | TCONS_00028774-exon-sc0000703-1575043694:133644..133813 | Clytia hemisphaerica | exon |
| TCONS_00028774-exon-sc0000703-1575043694:128176..129730 | TCONS_00028774-exon-sc0000703-1575043694:128176..129730 | Clytia hemisphaerica | exon |
| TCONS_00028774-exon-sc0000703-1510915933:134479..134651 | TCONS_00028774-exon-sc0000703-1510915933:134479..134651 | Clytia hemisphaerica | exon |
| TCONS_00028774-exon-sc0000703-1510915933:133644..133813 | TCONS_00028774-exon-sc0000703-1510915933:133644..133813 | Clytia hemisphaerica | exon |
| TCONS_00028774-exon-sc0000703-1510915933:128176..129730 | TCONS_00028774-exon-sc0000703-1510915933:128176..129730 | Clytia hemisphaerica | exon |
| TCONS_00028774-exon-sc0000703-1491911889:134479..134651 | TCONS_00028774-exon-sc0000703-1491911889:134479..134651 | Clytia hemisphaerica | exon |
| TCONS_00028774-exon-sc0000703-1491911889:133644..133813 | TCONS_00028774-exon-sc0000703-1491911889:133644..133813 | Clytia hemisphaerica | exon |
| TCONS_00028774-exon-sc0000703-1491911889:128176..129730 | TCONS_00028774-exon-sc0000703-1491911889:128176..129730 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000703 | supercontig | sc0000703:128176..134651 - |
Blast
The following BLAST results are available for this feature:
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