TCONS_00028766 (transcript) - C. hemisphaerica

Overview
NameTCONS_00028766
Unique NameTCONS_00028766
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2186

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00028766 ID=TCONS_00028766|Name=TCONS_00028766|organism=Clytia hemisphaerica|type=transcript|length=2186bp
AAAAGTAAAATTCAACATCATCACAGTAGCAATATTATCAAAGTCAAGAT
GGCACCAGTCAAGCCGGAAGAGGCCGAAGTGGAGAGCAACCAATCAAACA
AAAGTTATCAGCATATCATCTCTGAAGCGATAGGAGACATGGGGCGTTGG
CAGGCGTTTTTAATTTTCGCCCATTTTACACCCAAGATTGTTATGGCGTG
GTGTATGATAATTATTAGTTTCGGAGGTGCGAAAACAGATTGGTGGAAGC
GAACAATGGAAATTGACCCTATAACCAATGAAACGTTGTATGTAAACCGT
TTAAAAGACTGTTCGCCACTCGGCATAAACGATTCTATTGTGTATGATAA
CACGTATACCATAACTGCTGAGTGGGATTTGATATGCGGTTTAGATTACA
TTCCAACTTGGATTAAAACTTCACAAATGGTTGGCGTGATGGTCGGTGCT
GGAGTGCTTGGCCAACTAGGTGACTGGATAGGGCGGCAAAAATGTTCATG
GTTCGCCTTCACTTTAAGTGTAGTTTTCATTCTCATACAAGCCTTCAGTG
CCAACTGGATTATGATGCTGGTCTGCGCTTTCGTTGTCGGAATCGGTCTC
GGAGgtTTCTTGGTATTAAACTCGATCTACGTTTTGGAATACATTGGAAC
ATCGTGGCGTTCCGCCATTGGTTTTATTCCATTTTGGGCGTCAGGGGTGG
TCATTTTGGGCGGACTTTATTCCTTGTTACCAAATTGGAGACATTTGTGT
ATAGCATCAGCTATTACTGGAGCTCCATTTATTATTTTCATGTGGTTAAC
ACCGGAGAGCATCAGATGGCTTTTACAGCACGGTAAAACAGAGCAAGCAG
TTGAAGTGgtggaaaaaattgcaaaacatAACAAGCGGGCGAAACCAGAT
CTCACGGACTTAAAAGCGGTCGCCGATCAAGAAAGTTCAAAATTAAAAGA
GAACGCTCTGAAATACAATTATATGACTTTATTCAAATTCAAAGCTACAA
GATGGAGATGTCCATTATTTGGCTTTTTCTGGTTCACATGCGCTTATTCG
TATTATGCATTGACTTTTGGAGTTAGCTTGTTATCAGGTAATCCAGCAGC
TAATATGTCACTAATGGGCGTCGGCGAAGGGTGCAGCTTGATTATGTGTT
GGGCGTTGACTAAAAAATTTGGTCGAAAATACACAACAGTTATCCTATTC
ACGTGCACCGCTCTCTCCTCCTTCGTCATCACTATCGGTTACGCTACCAA
AGCAGAAGATTCGGAGACGATAAAGACAGTTTGTGCATTGGTCATCAGCC
TACGGTTTCGTTTCGATTTGCGGCCGAATCGGTGGTATCGTGGCTCCGCA
ATCCGCTCCACTTTATGACGTAGCAAAACATCTGCCTTACACCATCAATG
GCGTTTTGGGCGGTCTTTGCGCCCTAGGTGTCCTGCTTCTCCATGATACG
GCTACACAAGATCTGCAAGATAAAAtggatgaagatgaagaaggggATCT
CAAGAAAGAAGATACGACagtgtaaaaaaaatttgtcgaAAATATACCCA
GTTGGACATCTTACCTTTGAAAAGGAGACTCTAAAATCCATCGTAAAACA
GACAAAGTTTTTCTCATGAGGCCCCCCCAAGCGGATTtcgtgatgacgtg
atagggGCTTTtttagcgtgattacgtgatttgggaATTGTTTTTTCGTG
ATTTCGTGATGAGGTGGAAACgtgatttgaaagtttttttgagccgtgat
gcgtgatttggagGGATGGTTGATTgtccatttttttgctgattttcgta
atcgtgattgaagacaaaaaattgcgtgatatcgtgattaGAGTTACCGC
TAGGGGTGCCTCATGTATCAATCTCGTGTTTCAGTGCCCGAGTAATTTCC
ACTTCCATGATAGAAATTATGCTTTTTGATCATGCCAAAAAATTTACTTT
AGCTTTATACTGGGGAAATTTctagaaatatttatttttttatcatttcg
tCCTCCAAAAACGTAAATGTTTGAGGAATTTTAtaatctaattttttaca
agattttatGTCGTCTAAACTCGTGTATCAtgtatattttttaaagatac
gattttttacagaaagattttgaagatttttataGAAATAAAATACAGTC
GAACACGAACGGGGGAGCAAatatgttcgagttaag
Run BLAST on NCBI

transcript from alignment at sc0000703:173206..186285+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00028766 ID=TCONS_00028766|Name=TCONS_00028766|organism=Clytia hemisphaerica|type=transcript|length=13080bp|location=Sequence derived from alignment at sc0000703:173206..186285+ (Clytia hemisphaerica)
AAAAGTAAAATTCAACATCATCACAGTAGCAATATTATCAAAGTACGTTC
TAGTCTGCAATAAGCAAtatatacacccctgtttcacagccccgaTGGAG
CTTCTTTAAATAGTACAGAGGATTAAGTATCCCTGTTTCACAACCCCGGT
TGAACTTCTTCCAATAGTGGAGcactggggacgaaatttttgctaaattt
tccaaTGTGGCGggggtctgtgacacaagggtgtATATATGGTAAGATAT
GGATATATAGCTTTTAGACCTTTTTCGAAAACTTGGgtcaaacttaaatt
ttgattaatCCATCTATCCTTAGGTCAAGATGGCACCAGTCAAGCCGGAA
GAGGCCGAAGTGGAGAGCAACCAATCAAACAAAAGTTATCAGCATATCAT
CTCTGAAGCGATAGGAGACATGGGGCGTTGGCAGGCGTTTTTAATTTTCG
CCCATTTTACACCCAAGATTGTTATGGCGTGGTGTATGATAATTATTAGT
TTCGGAGGTGCGAAAACAGATTGGTGGAAGCGAACAATGGAAATTGACCC
TATAAGTAAGTAGTTACGCATGCGTAAGAAATCTCAGATTCATAATATGC
ATCCTTGCTTTGAAAATTTACCGAGTTACGTAATCTAACTTTTTCTACCC
AATTCATATGCATCGCTGTAATCATTTTCCGCTCAAGCCTCTTTTCTTTC
GCCGTTCTTTCTAACTTTTGCTTGTACCAGACGACTACATCATTTATATA
CTTTTGAGTCAGTACATTATTTTAGCTCAGGCTGGgtcgttcttaatttt
tgaaatttctaggCTTAAATGACTTTAAcacgcttagtttctttaattaa
aaactgaaaatttgttaaaagtaatattttcttagtattttgcgAAATCT
GAGGCTCATAATGCATTCAAATAGTTCTTAATCTTTGGCAAATATAATCA
GCCTCGTgctcttatgaaattgttcttataaaaaaagcgtgtagtgaTAA
AGAAACATTGAATGTTTGGATAGAAAGTTTTTACTTAGTTCTTTCACCTT
ACAGCCAATGAAACGTTGTATGTAAACCGTTTAAAAGACTGTTCGCCACT
CGGCATAAACGATTCTATTGTGTATGATAACACGTATACCATAACTGCTG
AGGTAAGCAAATCTGtcttttactttttgacatccctgtctcagtgaccc
gccTTTGGATTGTATaaaagcgagtttatgtatttgcacttttgagtacg
ggaaagtgactgaagcgattcaAAAAGACCCGCAGTTTTGATCTGCTAAA
TCGAgaacggtaaaagtgctgatttactgtagtcctcagctggtcaggat
ctggtcaaattagaaccttaccgtctccgtcacagaaaaacagatataca
taaactcgctcTTGTGTACCGtcgtcgttttttataagattctCATTCCC
GCACTAggattcttgtcacttttccggaACCTTTCCGCTATTTTTTCCGG
GATAAACGGAATGAGATTAGAAAGGGTTTGTTTCtctaaaggtacggaaa
atcttgtgctAACCCACGAAACTGCCCAACTTTCTGAAGCTCTTTTTTTA
ACTGCCCGTAGTTTTTTTCCGatagaaaagtggcaaaggaatcttataca
aaacgacggtatGATCACACATACTATAACTGCTGAGGTTAAGGTAATTT
TTATAataattaaatttggcgggaattaaactagcaaactagtctgttaa
ttaatcatgtcagagggcacataaaggcggcgggggtttgctagaatagg
agctgcgtaggagaacgagcaaaagttggcgAGAGGATGCTGATTAAACA
GCTTTCAGCCCTtaccgccgacaaaatttcttcctatgcttacctaactc
ctacgctcacttttcccgcgtgataccgttccagcccgactggcgtgcca
gtctaggCGGGAATTTAAAATTAGGTGGCTGGCGGAAAAATTAAATCTAG
CGGAAACTTAATTTGGCTAATTTCGGCCAGATCTGCTAaacccaccaaaa
tttcttcccttaatcCAAGAAATGtagtaataaaaaaaatctaaccTTTT
TCGTTTTccatttcttattcttttagTGGGATTTGATATGCGGTTTAGAT
TACATTCCAACTTGGATTAAAACTTCACAAATGGTTGGCGTGATGGTCGG
TGCTGGAGTGCTTGGCCAACTAGGTAcggatatttttctttcttttttaa
tagATGGTTCAAATCGAAGAAGATGATGTGCGGGATTAAACCTCGTATGA
AAcactagacgatgttatcacccgctacagtgatagtaaaggcgagaaaa
tatggcgttatggcagtaaacggaaaaaaatcggcggaagagtttcgaag
actggcaaactctaccgactgtaaactctttatTTCGGCAAAAAGCCTTT
Aggtttttttcttagatagtgatttgtcatagactatagcatagtctaat
aAAACCCTAGATCTCGCACTAGATagtcttttaaaaattaaacaatgaag
ctcaaaatcgccaaaaattaagaacagtttaaATACAATGCTGACctaaa
attactcaatttcaagcaattcagGGGTCAAAACAGTAACAATTGGGTAT
GAAGCCTACAACACCACAATTACAACCTATCAATAAAAACAGGAAatgaa
caatttgaggctcaaagtgccaaaaaaaaacaGCCGAGAAAAAAGTGTAT
CTTTAATTTAGTGACGTCACAATATCAGATGGCGTACTATGTTGCTTCAA
CTCCTGTAGTCTGCGAGTATAGACTAGttccatttcattttttctatatC
TGTGCGAGATGAGAAAAGTTTCAGTGTCATTCTAATCTTTTAATCTGACA
AGCTACTATAACCCAAGACTACtagtttcattttctttctgAACCTCtta
aaataaacacaaatacTACCCTTATTCTGAtcaaaatattcatgatatgc
accactggagagtcttctgagaacttctAAAATTTTTCACCCAATAGGTC
agttaaacaatagaaaaagtgacgttattgggtggaacaaaaaccaAAAC
GTTGCATATCTTATAAATAACAAATACTACCCTTATTATGAtcaaaatat
tcatgatatgcaccactggagagtcttctgagaacttctaaaatttttca
cccaatacgtcacttaaacaatagaaaaagtgacgtattgggtggaacaa
aaaccaAAACGTTGCATATCTTATAAATAACAAATACTACCCTTATTATG
Atcaaaatattcatgatatgcaccactggagagtcttctgagaacttcta
aaatttttcacccaatacgtcacttaaacaatagaaaaagtgacgtattg
ggtggaacaaaaaccaAAACGTTGCATATCTTATAAATAACAAATACTAC
CCTTATTATGAtcaaaatattcatgatatgcaccactggagagtcttctg
agaacttctaaaatttttcacccaatacgtcacttaaacaatagaaaaag
tgacgtattgggtggaacaaaaaccaAAACGTTGCATATCTTATAAATAA
CAAATACTACCCTTATTCTAATCAAAATATAATCTATCTCTTCATTAATT
CAGGTGACTGGATAGGGCGGCAAAAATGTTCATGGTTCGCCTTCACTTTA
AGTGTAGTTTTCATTCTCATACAAGCCTTCAGTGCCAACTGGATTATGAT
GCTGGTCTGCGCTTTCGTTGTCGGAATCGGTCTCGGAGGTAAGTGTAACc
cgattttccccgattttGTTTACTATCCAATGGAGATTTTCACTTTTACT
AAGCTACGTAGCCAGattttccctgattttcaaactattcaatgaagatt
ttcatttttgataaaagttgaTTTCGGAGGTAAGTGTAGCCCGATTTTCT
CCGATTTTCGAACTATCCAATGGAGATTTTCAGTCGACCATCGACCTTTT
gcggctggcacacaacgtcattTCAACGTTTATGTAATGTTAACAACGTC
CATATagcgttaaatgaacgttgaaaacaacgttgtgtgccagttgggtt
TTTGAGGATAGAAAATCTAATAGCCTTAAGATTTGCGTAGTATTGTCAAC
AATGGATTGAACATGGCTGGAAAGTCGGATAAAATATTTGTATTTCGAGT
CTTTCCCATGCCGTTCTAAATTACAGGCCTGGTGAACGCGCAGCTATCTC
GTTTTTATGCAGGCCCAAAATTGGGAACTAACGTAGCATATCAAGGTCAA
AAAATGAAACTGTTTCGTGTTTTAGATATCTAGCTGGTTTTATTAGGGGG
AGTTTTGgaggtacttaatttcgcgaattagaTATTGGAATTATCAAATT
TAGCGAAATTTAGAACACCATGGTCTTTCCCAAATTCACAAGATTCTTTG
CAGTAACTTAAAAATCGAAtaaccccagctggcacacagcgttgctttaa
cgttcaaataacgttatttggacgttatgaatgtcaaatggacgttgttt
tgacgttgtgtgccggctgggataGAGTTAACTGtatacaatttcatttt
caggtTTCTTGGTATTAAACTCGATCTACGTTTTGGAATACATTGGAACA
TCGTGGCGTTCCGCCATTGGTTTTATTCCATTTTGGGCGTCAGGGGTGGT
CATTTTGGGCGGACTTTATTCCTTGTTACCAAATTGGAGACATTTGTGTA
TAGCATCAGCTATTACTGGAGCTCCATTTATTATTTTCATGTGGTAAGtt
tattacacccctgtatcagtgcgACCTTGTCTTTCCATCTAAGATCTTTG
GCTTGTAAATTCCTTCCATGATCCTGAGCAAAACCTCTAAACATTTTTGT
CTAATTCGCAATTATGATAATTTATAATCTCTTAAAAATGTgttcttaca
cggttcttacgtcaaaatattattgttttcttgctaaaagtaaaaaattt
gtaaGTTGAAAATCTCGAGCTAGTTGAAAAGGTTTAGAGGTTTAGCTTAG
GACTATATAAAGAATCTACCAGCCAAtgatctcaaaccatctgataaTCC
CTTTGAAAATCTGTATTATCTTAGTAGGATGTGTGCAGGTATTCTACTCC
ATCAGCAAACATTGCAGCTTTGAGTTATAAtcattgagttttaagcccga
agggctagaggtgaaactttaacctttctcaggcaagagaaattaaaGCT
ACTTTTCTCCCATCAAAAACGCTCAAAGAACAAGCCGTAATCATGACgcc
ggattgtatctagcggttcttttgttttggaggactacattttttgaaat
ctagcgatagattttagtttcaatccggcgtttgtgtaaaaactacgcgc
gggcattctggatgggaaataagtggtttcatttccatccaggagtctcg
cctctagcccttcgggcttgaaactcaatggttataaTGCCCTAGTCTTA
GGGGGTTGGATctgagattttccaaaaaatcctGTCAGGGTCTTTTGGCT
TTCCCCTCAGCTGGGAGGTGGTGTAAATTACTCTCTATAATCCGAAGATT
TTTGATCCCTTGaagattgaattagagagagagtcaaTTGATAGTAAATT
CTCTTTCTCAGGTTAACACCGGAGAGCATCAGATGGCTTTTACAGCACGG
TAAAACAGAGCAAGCAGTTGAAGTGgtggaaaaaattgcaaaacatAACA
AGCGGGCGAAACCAGATCTCACGGACTTAAAAGCGGTCGCCGATCAAGAA
AGTTCAAAATTAAAAGAGAACGCTCTGAAATACAATTATATGACTTTATT
CAAATTCAAAGCTACAAGATGGAGATGTCCATTATTTGGCTTTTTCTGGt
aagttgaaaatttttgtcagaaaaaaaagttcacaAAGTCTAATAaactt
ttggtttgttttgaatttttctctGATCCTTAACCTATAGAGGCCATAGA
GTGTCGCTGGCATATTGAATGAGCTGTGCTAAGGGAAGGTTTATCTCTCT
CAGCTCGATTTTTTCGGTTCTGTTCCTATAGGGGTGGACCTAGGAGTGCT
GGGACCTATGTCACCCTGTGGCATTTttcacttaagggctctggacatac
ccaatttttcgattttataccaacttaaatggcaatttctgtattttaaa
aagattaatgtataactttttttatatgtcctgttagacctaccttttta
gaatttaaaaatcgaaaaattgaaatgaaaaaatcaaatgaagaacaaaa
cgaagagtttttcgaaaaagagtatttcacctttcaaagccctaatctcg
gtataaatcaaacattttggaattttttttggttcaggtgatgtatctat
ttaatatctaaaaatacaatttcggaaaatttttgtggaagtatctttac
tttaaaatctccaaaaaacctcatttttggcaattttcttgggatgtagc
caaatagaaaatttttccgaaaaaatccaaataaagaaattatttgtcat
tatcttagaaaaagtttgaaacaataaaatgatttccccaaggagattag
gcttttttgtgaaaaataaatgtttttttttataagcatacaaaaatccg
aaaacaggctcagagatgcttaggtcgaaagcttaataaggctgaaaaat
gcttgaggggatgcttaaatctaaagtataaatttaggaaaatactgaaa
atccgtaaaattccagccaaaaaaagccagaatcaggaaaaatacatttt
tcttaGGCTCAAGTAATttttgccatatgcttaatttttccccatatctg
agcctagatatgcttataagtgcaatgcttataaaaaaaacatgtaccac
agggataactggcttgtggcagccaagcgttcatagcgacgttgcttttt
gtatatgaatagcgtcgttttgacgttttattaaggtccatgtcacactt
attccttaattactcatgatgtaattacttaaattcattttttcaaaagc
agtttgttcttaaacatgccaaagaagcgaaaacataagattttatcttc
aaattctgaaatttatttctcactatgaccagagcccttaatttgGATGC
GCGTGcgcatttgaaatcaaaaactgtttgaaaattcaaagttaCGTTAT
GACATTTTATGAGTTAAGATTCATTTCCAGAGCTACTTTAAATGAAAACG
ATTAAAAGGGACGACAAGTCTTTTTCAAAACACATAAAACTTCTGTATca
gtatttttaaaaaggaattttactGGTAAATACAGTCTCCAGGCAACTCC
CCGGACGGTACCCCAAGGAAAGCCGTTTTTCgaattttgatgtattttta
cgTGCCCAAAAGCTCCCAATGGAAAATGGATGGCAATCAATGAGAATACT
CCCCTGACAATCAATCTTCTTTTCCTTCTAGGTTCACATGCGCTTATTCG
TATTATGCATTGACTTTTGGAGTTAGCTTGTTATCAGGTAATCCAGCAGC
TAATATGTCACTAATGGGCGTCGGCGAAGGGTGCAGCTTGATTATGTGTT
GGGCGTTGACTAAAAAGtaagtaaaatttctttttataagaatgagtAAG
GTTTTGGGTAAATTTATAACTAAGGATTGGCTTTAAAGCTTCGCAAAGTA
ACCTGAAGACTTCAAAGATGTTTTTCGTGACCCTGCGATCATCTGTCCTG
ATTGGCTTTAAAGCTTCGATTGCTTTACTTTAGCCGATCACAGCGCTCAA
TATTCATCCAAAATCTGGAAAGCCATCGAAAAGAACCGTCTCCTTTCGCT
TACGGGGCCATGACCTTTAGATCGAATAGCTGTCGTACGGGGAGTATTTA
AAGGATCTATTACACCTGCTGGACTTTCTTTCCGGTGTGGCGGTATATCC
CCTTTTCAAATATAGTTGATACTCTCTGAGTGACGTTCTACAAacctaga
ctagcaagcgtctgtctttctttggacacaggaacgcaggaatagtgctt
ataaagagttcttataaaaaatagaaattgccgcgggagagttgTGTGgt
ttgtattcagtgaacatatagacATAGAGCCCATTGCAAGCTTAAGCTgt
agcgaaatacaacgacgtggtttactagccAAAGCAAACCCTaccttttg
atattaacaaaggaaaaagctagcaaaaagttaaaaacaataAGCCTCCA
GACCAGagttttatacggactatgatgTAATTGAAGCTGAACTTCCTACT
TTCATTCCACTTTAGATTTGGTCGAAAATACACAACAGTTATCCTATTCA
CGTGCACCGCTCTCTCCTCCTTCGTCATCACTATCGGTTACGCTACCAAA
GCAGAAGATTCGGAGACGATAAAGACAGTTTGTGCATTGGTATCTAGGCT
ATTTCTATCAGGAGCCTGGGGTTCACTTATCATCTACACTGTAGAAATAT
TCCCTACAATGTTGAGGTTAGTATAACGAGGGCATTGGTATCTAGGCTAT
TTCTATCAGGAGCCTGGGGTTCACTTATCATCTACACTGTAGAAATATTC
CCTACAATGTTGAGGTTAGTATAACGAGGGTATTGGTATCTAGGCTATTT
CTATCAGGAGCTTGGGGTTCACATATCATCTACACTATAGAAATATTCCC
TACAATGTTGATGTTAGTATAAAGAGGGTATTGGTATCTAGGCTATTTCT
ATCAGGAGCTTGGGGTTCACATATCATCTACACTATAGAAATATTCCCTA
CAATGTTGAGGTTAGTATAAAGAGGGTATTGGTATCTAGGCTATTTCTAT
CAGGAGATTGGGGTTCACTTATCATCTACACTATAGAAATATTCCCTACA
ATGTTGAGGTTAGTATAAAGAGGGTATTGGTATCTAGGCTATTTCTATCA
GGAGGTTGGGGTTCACTTATCATCTACACTATAGAAATATTCCCTACAAT
GTTAAGGTTAGTATAACGAGGGTATTGGTATCTAGGCTATTTCTATCAGG
AGCCTGGGGTTCACTTATCATCTACACTATAGAAATATTCCCTACAATGT
TGAGGTTAGTATAACGAGGGTATTGGTATCTAGGCTATTTCTATCAGGAG
CCTGGGGTTCACTTATCATCTACACTGTAGAAATATTCCCTACAATGTTG
AGGTTAGTATAAAGAGAGTATTGGTATCTAGGCTATTTCTATCAGGAGCT
TGGGGTTCACTTATCATCTACACTGTAGAAATATTCCCTACAATGTTGAG
GTTAGTATAACGAGGGTATTGGTATCTAGGCTATTTCTATCAGGAGCCTG
GGGTTCACTTATCATCTACACTGTAGAAATATTCCCTACAATGTTGAGGT
TAgtataaagatttttttagtatttaGGCTATCTTTCATACGTTAACAAA
TACCCGTCGGCTGAATTTAAAGCCTCGGAGGACCTAAAGACATAAAactt
ttgggtgggaaattaaGCCACTTATTTCAGATCACGAAATATTTAGGTCA
ATGAATTTGGTGACTCAGCTGAAATTATTCATCCTAAAACCCAAATATTT
CATGATATACTATAATAAGTTAGTACGTTTCAAGACCCATGGCTTTGGTA
TTTAGGTTATTTCCATATATACGTTCACGTATACCAGTCGGCTgaatcat
tgagtttaaagcctcgATATAAATTTTGGGTGGGACATTAAGCCACTATT
TCTCATCCATAACTCACGAACCGCGTGGTTTTAACACAGAAGCCACGCCG
TATTGGTAGGGGAAACTATCGCCagatttagaaaaatgttcCGTGTAAAa
acgctagattcaatctgtcattccAAAAACAGCGCAAATGTTCACTTTTT
CTTCGTCTGAGAAAGTTTGAAGATTCCACTCTGGCCCATTCGACCAATAa
tccttaaaaataaaaaaatatggcCAGCTCAACACTGAGCCTTCTCGAAA
TTTTGCTCTCAACTTACTGGTAAATTCAGTCTCCAGGCAGCTCCCTGGAC
GGTAACCCAAGGAATGAGAAGAGCCCTAAAATTTAGACAAAGCGAAGTTA
AAGTGATGCgaaaaataccttatcggggaaaacttcgtcggggaaaagtg
acgaatattttttcccaacgaaaattttccccgacgcagcccgacgaagt
tttccccgataaggtagtctaacagtaaaatattttacttttaattgTTC
AGGTCATCAGCCTACGGTTTCGTTTCGATTTGCGGCCGAATCGGTGGTAT
CGTGGCTCCGCAATCCGCTCCACTTTATGACGTAGCAAAACATCTGCCTT
ACACCATCAATGGCGTTTTGGGCGGTCTTTGCGCCCTAGGTGTCCTGCTT
CTCCATGATACGGCTACACAAGATCTGCAAGATAAAAtggatgaagatga
agaagggtaagttttcattgaaaagtctGTTATTTATGTTTGGGAAATTG
AGGCAATTATATTAAGTTGTCTATAGAAAAGTCTGTTTGATGTGCTTGAA
AAACCGAGGCGAAATGCGTAGTTTCGACACACCTAGTTTCGTAGTTACTT
TAACTGAGGAATCAAAGaagaaagttttatataatCTGATTGAGGCagct
acactttttttataaaaacgtaCAAAACTTTCGaggccttcgaatgttct
taactataactttctgagtttttaaaactaaaaatggTTCTTAATATGCT
TTTCATGGTTTCTGCCTACTTTTTCAGTCCcccttaaaatgcaattttgc
ccTTAAAGAAAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNCAAATATTTTAGTCCccccttttttcttattttga
tagattcttgcagcccttgataaagaatccccccttatttaaaaaaaatg
acaaaaatcccCCCTATtttaaaaggcaatttttttgacccccccttatt
ttaaggggggggggggcagaaacCATGACTTTTGTGAATATTATTACAAC
TGCCTTAGAAATTCGGTGTTTTGGTGGatagtccgcaaagccttaaaacg
ttcttaaaCTTGTGCTTAATACTTAAGCCAtccaagccttatgttcttat
atagtttgttcttataaaaatattttttttttttgcagggATCTCAAGAA
AGAAGATACGACagtgtaaaaaaaatttgtcgaAAATATACCCAGTTGGA
CATCTTACCTTTGAAAAGGAGACTCTAAAATCCATCGTAAAACAGACAAA
GTTTTTCTCATGAGGCCCCCCCAAGCGGATTtcgtgatgacgtgataggg
GCTTTtttagcgtgattacgtgatttgggaATTGTTTTTTCGTGATTTCG
TGATGAGGTGGAAACgtgatttgaaagtttttttgagccgtgatgcgtga
tttggagGGATGGTTGATTgtccatttttttgctgattttcgtaatcgtg
attgaagacaaaaaattgcgtgatatcgtgattaGAGTTACCGCTAGGGG
TGCCTCATGTATCAATCTCGTGTTTCAGTGCCCGAGTAATTTCCACTTCC
ATGATAGAAATTATGCTTTTTGATCATGCCAAAAAATTTACTTTAGCTTT
ATACTGGGGAAATTTctagaaatatttatttttttatcatttcgtCCTCC
AAAAACGTAAATGTTTGAGGAATTTTAtaatctaattttttacaagattt
tatGTCGTCTAAACTCGTGTATCAtgtatattttttaaagatacgatttt
ttacagaaagattttgaagatttttataGAAATAAAATACAGTCGAACAC
GAACGGGGGAGCAAatatgttcgagttaag
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_016312XLOC_016312Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00028766-exon-sc0000703-1491911889:173206..173247TCONS_00028766-exon-sc0000703-1491911889:173206..173247Clytia hemisphaericaexon
TCONS_00028766-exon-sc0000703-1510915933:173206..173247TCONS_00028766-exon-sc0000703-1510915933:173206..173247Clytia hemisphaericaexon
TCONS_00028766-exon-sc0000703-1575043694:173206..173247TCONS_00028766-exon-sc0000703-1575043694:173206..173247Clytia hemisphaericaexon
TCONS_00028766-exon-sc0000703-1491911889:173529..173760TCONS_00028766-exon-sc0000703-1491911889:173529..173760Clytia hemisphaericaexon
TCONS_00028766-exon-sc0000703-1510915933:173529..173760TCONS_00028766-exon-sc0000703-1510915933:173529..173760Clytia hemisphaericaexon
TCONS_00028766-exon-sc0000703-1575043694:173529..173760TCONS_00028766-exon-sc0000703-1575043694:173529..173760Clytia hemisphaericaexon
TCONS_00028766-exon-sc0000703-1491911889:174260..174357TCONS_00028766-exon-sc0000703-1491911889:174260..174357Clytia hemisphaericaexon
TCONS_00028766-exon-sc0000703-1510915933:174260..174357TCONS_00028766-exon-sc0000703-1510915933:174260..174357Clytia hemisphaericaexon
TCONS_00028766-exon-sc0000703-1575043694:174260..174357TCONS_00028766-exon-sc0000703-1575043694:174260..174357Clytia hemisphaericaexon
TCONS_00028766-exon-sc0000703-1491911889:175332..175428TCONS_00028766-exon-sc0000703-1491911889:175332..175428Clytia hemisphaericaexon
TCONS_00028766-exon-sc0000703-1510915933:175332..175428TCONS_00028766-exon-sc0000703-1510915933:175332..175428Clytia hemisphaericaexon
TCONS_00028766-exon-sc0000703-1575043694:175332..175428TCONS_00028766-exon-sc0000703-1575043694:175332..175428Clytia hemisphaericaexon
TCONS_00028766-exon-sc0000703-1491911889:176859..176993TCONS_00028766-exon-sc0000703-1491911889:176859..176993Clytia hemisphaericaexon
TCONS_00028766-exon-sc0000703-1510915933:176859..176993TCONS_00028766-exon-sc0000703-1510915933:176859..176993Clytia hemisphaericaexon
TCONS_00028766-exon-sc0000703-1575043694:176859..176993TCONS_00028766-exon-sc0000703-1575043694:176859..176993Clytia hemisphaericaexon
TCONS_00028766-exon-sc0000703-1491911889:177809..177998TCONS_00028766-exon-sc0000703-1491911889:177809..177998Clytia hemisphaericaexon
TCONS_00028766-exon-sc0000703-1510915933:177809..177998TCONS_00028766-exon-sc0000703-1510915933:177809..177998Clytia hemisphaericaexon
TCONS_00028766-exon-sc0000703-1575043694:177809..177998TCONS_00028766-exon-sc0000703-1575043694:177809..177998Clytia hemisphaericaexon
TCONS_00028766-exon-sc0000703-1491911889:178867..179103TCONS_00028766-exon-sc0000703-1491911889:178867..179103Clytia hemisphaericaexon
TCONS_00028766-exon-sc0000703-1510915933:178867..179103TCONS_00028766-exon-sc0000703-1510915933:178867..179103Clytia hemisphaericaexon
TCONS_00028766-exon-sc0000703-1575043694:178867..179103TCONS_00028766-exon-sc0000703-1575043694:178867..179103Clytia hemisphaericaexon
TCONS_00028766-exon-sc0000703-1491911889:180687..180821TCONS_00028766-exon-sc0000703-1491911889:180687..180821Clytia hemisphaericaexon
TCONS_00028766-exon-sc0000703-1510915933:180687..180821TCONS_00028766-exon-sc0000703-1510915933:180687..180821Clytia hemisphaericaexon
TCONS_00028766-exon-sc0000703-1575043694:180687..180821TCONS_00028766-exon-sc0000703-1575043694:180687..180821Clytia hemisphaericaexon
TCONS_00028766-exon-sc0000703-1491911889:181521..181644TCONS_00028766-exon-sc0000703-1491911889:181521..181644Clytia hemisphaericaexon
TCONS_00028766-exon-sc0000703-1510915933:181521..181644TCONS_00028766-exon-sc0000703-1510915933:181521..181644Clytia hemisphaericaexon
TCONS_00028766-exon-sc0000703-1575043694:181521..181644TCONS_00028766-exon-sc0000703-1575043694:181521..181644Clytia hemisphaericaexon
TCONS_00028766-exon-sc0000703-1491911889:183458..183661TCONS_00028766-exon-sc0000703-1491911889:183458..183661Clytia hemisphaericaexon
TCONS_00028766-exon-sc0000703-1510915933:183458..183661TCONS_00028766-exon-sc0000703-1510915933:183458..183661Clytia hemisphaericaexon
TCONS_00028766-exon-sc0000703-1575043694:183458..183661TCONS_00028766-exon-sc0000703-1575043694:183458..183661Clytia hemisphaericaexon
TCONS_00028766-exon-sc0000703-1491911889:185594..186285TCONS_00028766-exon-sc0000703-1491911889:185594..186285Clytia hemisphaericaexon
TCONS_00028766-exon-sc0000703-1510915933:185594..186285TCONS_00028766-exon-sc0000703-1510915933:185594..186285Clytia hemisphaericaexon
TCONS_00028766-exon-sc0000703-1575043694:185594..186285TCONS_00028766-exon-sc0000703-1575043694:185594..186285Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000703supercontigsc0000703:173206..186285 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.0386379	0	0	0	0	0	0	0	0	0	0.485864	0	0	0	0	0	0.0209165	0.00101427	0	0	9.47049e-06	1.51835	0.000280899	0	0	0	0	0	0.238003	0
Blast
[Close]
BLAST of TCONS_00028766 vs. Swiss-Prot (Human)
Match: S22AF (Solute carrier family 22 member 15 OS=Homo sapiens GN=SLC22A15 PE=2 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 1.557e-20
Identity = 104/407 (25.55%), Postives = 183/407 (44.96%), Query Frame = 1 
Query:  124 EAIGDMGRWQAFLIFA-HFTPKIVMAWCMIIISFGGAKTDWWKRTMEIDP--------ITNETLYVNRLKDCSPLGINDSIVYDNTYT-ITAEWDLICGLDYIPTWIKTSXXXXXXXXXXXXXXXXDWIGRQKCSWFAFTLSVVFILIQAFSANWIMMLVCAXXXXXXXXXXXXXNSIYVLEYIGTSWRSAIGFIP--FWASGVVILGGLYSLLPNWRHLCIASAITGAPFIIFMWLTPESIRWLLQHGKTEQAVEVVEKIAKHNKRAKPDLTDLKAVADQESSKLKENALKYNYMTLFKFKATRWRCPLFGFFWFTCAYSYYALTFGVSLLSGNPAANMSLMGVGEGCSLIMCWALTKK--FGRKYTTVILFTCTALSSFVITIGYATKAEDSETIKTVCALVISL 1302
            +A+G+MG +Q +L F      ++ +A   I+I+  GA   +     E+ P           +  + + L   +   I+  + + +++T I +EW LI    Y  +   +    GV VG    GQL D  GR+K     F L ++F +   FS ++    V  F+VG+  GG  ++  + + E +GT++ +  G I   F+A G+     L   + +WR L I   + G    +     PES RWL   G+  +A E +  IAK N++ K   +    +    +   +E     +++ LF+++       +  F WF C+  YY LT     L G+  AN++L G+ E  S  +C  L  +  FGRK T         L+  ++   +  + +D+     V +  +SL
Sbjct:    8 QAVGEMGIYQMYLCFLLAVLLQLYVATEAILIALVGATPSYHWDLAELLPNQSHGNQSAGEDQAFGDWLLTANGSEIHKHVHFSSSFTSIASEWFLIANRSYKVSAASSFFFSGVFVGVISFGQLSDRFGRKKVYLTGFALDILFAIANGFSPSYEFFAVTRFLVGMMNGGMSLVAFVLLNECVGTAYWALAGSIGGLFFAVGIAQYALLGYFIRSWRTLAILVNLQGTVVFLLSLFIPESPRWLYSQGRLSEAEEALYLIAKRNRKLKCTFS----LTHPANRSCRETG---SFLDLFRYRVLLGHTLILMFIWFVCSLVYYGLTLSAGDLGGSIYANLALSGLIEIPSYPLCIYLINQKWFGRKRTLSAFLCLGGLACLIVM--FLPEKKDTGVFAVVNSHSLSL 405
The following BLAST results are available for this feature:
BLAST of TCONS_00028766 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
S22AF1.557e-2025.55Solute carrier family 22 member 15 OS=Homo sapiens... [more]
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