TCONS_00028762 (transcript) - C. hemisphaerica

Overview
NameTCONS_00028762
Unique NameTCONS_00028762
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2287

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00028762 ID=TCONS_00028762|Name=TCONS_00028762|organism=Clytia hemisphaerica|type=transcript|length=2287bp
caatttaGGAAGTGATAATTtgaataaatgaaaatgaagaagaaagatGG
GCAGTTTTACCAAGAGGTCAAGATGGCACCAGTCAAGCCGGAAGAGGCCG
AAGTGGAGAGCAACCAATCAAACAAAAGTTATCAGCATATCATCTCTGAA
GCGATAGGAGACATGGGGCGTTGGCAGGCGTTTTTAATTTTCGCCCATTT
TACACCCAAGATTGTTATGGCGTGGTGTATGATAATTATTAGTTTCGGAG
GTGCGAAAACAGATTGGTGGAAGCGAACAATGGAAATTGACCCTATAACC
AATGAAACGTTGTATGTAAACCGTTTAAAAGACTGTTCGCCACTCGGCAT
AAACGATTCTATTGTGTATGATAACACGTATACCATAACTGCTGAGTGGG
ATTTGATATGCGGTTTAGATTACATTCCAACTTGGATTAAAACTTCACAA
ATGGTTGGCGTGATGGTCGGTGCTGGAGTGCTTGGCCAACTAGGTGACTG
GATAGGGCGGCAAAAATGTTCATGGTTCGCCTTCACTTTAAGTGTAGTTT
TCATTCTCATACAAGCCTTCAGTGCCAACTGGATTATGATGCTGGTCTGC
GCTTTCGTTGTCGGAATCGGTCTCGGAGgtTTCTTGGTATTAAACTCGAT
CTACGTTTTGGAATACATTGGAACATCGTGGCGTTCCGCCATTGGTTTTA
TTCCATTTTGGGCGTCAGGGGTGGTCATTTTGGGCGGACTTTATTCCTTG
TTACCAAATTGGAGACATTTGTGTATAGCATCAGCTATTACTGGAGCTCC
ATTTATTATTTTCATGTGGTTAACACCGGAGAGCATCAGATGGCTTTTAC
AGCACGGTAAAACAGAGCAAGCAGTTGAAGTGgtggaaaaaattgcaaaa
catAACAAGCGGGCGAAACCAGATCTCACGGACTTAAAAGCGGTCGCCGA
TCAAGAAAGTTCAAAATTAAAAGAGAACGCTCTGAAATACAATTATATGA
CTTTATTCAAATTCAAAGCTACAAGATGGAGATGTCCATTATTTGGCTTT
TTCTGGTTCACATGCGCTTATTCGTATTATGCATTGACTTTTGGAGTTAG
CTTGTTATCAGGTAATCCAGCAGCTAATATGTCACTAATGGGCGTCGGCG
AAGGGTGCAGCTTGATTATGTGTTGGGCGTTGACTAAAAAATTTGGTCGA
AAATACACAACAGTTATCCTATTCACGTGCACCGCTCTCTCCTCCTTCGT
CATCACTATCGGTTACGCTACCAAAGCAGAAGATTCGGAGACGATAAAGA
CAGTTTGTGCATTGGTATCTAGGCTATTTCTATCAGGAGCCTGGGGTTCA
CTTATCATCTACACTGTAGAAATATTCCCTACAATGTTGAGGTCATCAGC
CTACGGTTTCGTTTCGATTTGCGGCCGAATCGGTGGTATCGTGGCTCCGC
AATCCGCTCCACTTTATGACGTAGCAAAACATCTGCCTTACACCATCAAT
GGCGTTTTGGGCGGTCTTTGCGCCCTAGGTGTCCTGCTTCTCCATGATAC
GGCTACACAAGATCTGCAAGATAAAAtggatgaagatgaagaaggggATC
TCAAGAAAGAAGATACGACagtgtaaaaaaaatttgtcgaAAATATACCC
AGTTGGACATCTTACCTTTGAAAAGGAGACTCTAAAATCCATCGTAAAAC
AGACAAAGTTTTTCTCATGAGGCCCCCCCAAGCGGATTtcgtgatgacgt
gatagggGCTTTtttagcgtgattacgtgatttgggaATTGTTTTTTCGT
GATTTCGTGATGAGGTGGAAACgtgatttgaaagtttttttgagccgtga
tgcgtgatttggagGGATGGTTGATTgtccatttttttgctgattttcgt
aatcgtgattgaagacaaaaaattgcgtgatatcgtgattaGAGTTACCG
CTAGGGGTGCCTCATGTATCAATCTCGTGTTTCAGTGCCCGAGTAATTTC
CACTTCCATGATAGAAATTATGCTTTTTGATCATGCCAAAAAATTTACTT
TAGCTTTATACTGGGGAAATTTctagaaatatttatttttttatcatttc
gtCCTCCAAAAACGTAAATGTTTGAGGAATTTTAtaatctaattttttac
aagattttatGTCGTCTAAACTCGTGTATCAtgtatattttttaaagata
cgattttttacagaaagattttgaagatttttataGAAATAAAATACAGT
CGAACACGAACGGGGGAGCAAatatgttcgagttaag
Run BLAST on NCBI

transcript from alignment at sc0000703:171413..186285+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00028762 ID=TCONS_00028762|Name=TCONS_00028762|organism=Clytia hemisphaerica|type=transcript|length=14873bp|location=Sequence derived from alignment at sc0000703:171413..186285+ (Clytia hemisphaerica)
caatttaGGAAGTGATAATTtgaataaatgaaaatgaagaagaaagatGG
GCAGTTTTACCAAGAGGTTTGAAATTCCCTCTTTTAAAATGCagtagtct
ctttaactcgaacttctataactcgcctccttaactcaaacatcTTGTTc
attcagttaacaatgccttataaactaatttccataactcgaaatttcct
caaTTCGAATGAATGAATTTGTGAATTTCTGAATTTCTGAATATCTAGAA
TGAAATATCTGTACTGATTCCTTAGCTCCGATTTTAGACAGCCGACTGTC
TACCCTGACTTCCCTCATTTTTCTAGGAAagtccgcaaaaatttttattg
gttgagttacaggaggccATTTTTCGTAATTATAAGACGCTTTTATTacc
cttaagggaagaaattttcgctgaTCTTAATTTCGCAGTTGAGAGGATTT
ATTTGTTTAAAATATGGCTTATTTTGCccaaaaaacttgattttttaaat
catgagaatattattgtttcgtggaatttaatttctcGGATTTGTcataa
aaccgcgaaattaaattccgcgaaaatttgttccgcgaaagtttcttccc
taAATGCTTAGTCAGCATCTTGGAATGACTAACCGATTCCCTTTACATGA
CAATGGTTAAACCTGGCAATTAAACTTGCCATGTGAACTGCTGCGATTAC
CTGTGTACAACAAAGGTCCATGGCCACTATACCACAGAATCTAAAAGAAA
GTCGGCTGTCTGAAAGTCAATTTAGCCTGCACCAAACTCTTCTTCTATGA
AAAGGTGACGGAGACAAAAAATGTTCCATGGTGTTCGGGTTGGTACAAGT
TAAAATGTACtggtgatttcaatgaatgctTAAATCAATAccataatttt
ttcttcaatatttttaaaataaaaaatttgaaacggTCAACTTTCCGTCG
ATTTTCTGCCCGCTCAAATGGAGGCAAGGTAGAAAGTTCGCCTTAAATAC
AACCCCTTCTTACAGttccactgggaccccttcccactggaaaaattggt
caaaatattgtccccggtggaaaattatccgcAAACTTttttccccactg
aaaataatcaaataaaccaatcctcagtgcaaaatattatgctatttttc
ccatccccactgagttTTCTGACTTGAGAACAAAAGTATTTAAATCCaca
gccataaaaaaatatgggaatatcaatacccattgtgtttcagtccgtta
tttctaCCCTCACTCGCTGAAAAATATCGGGTTTGAATGAAAGAAGAGAT
GGTCGAGGAAATTCTTTTCAGTAAAATCCCTTAAAATACGTAAAGGAGAA
TACAAAGGCATTAGCGTGATCATTCGAATAGAGCGTTCCCTAAATCCTAG
GTTATGCAAAAAGTATCTCGCCTTCCCAGGCCATTTTACTAGACTCTTGA
CAAGGAATGTCAAAATAAACGAGACCAGAAAGGTTCCCTTTGTATTAagg
taaacaaacaaacaaggctTTAAGTGACATAATATTATTTGGGCGGCCTT
TACGAGTAACTGGTGTTTTCGTATTGAAGTTCTGAAggttttttcttaat
tttcgtTCACTTGGTGCATTGAACTGTAACAAGGAGCACTGGTATAAACT
TGCATCCATTACTATAGTAtacattaaaaaatttttttcattttaatttt
gttgttgttttgttttgataccTTTAGTTGTTTGTCTAGAGGTTTTGAAA
TTGAGAAAGTGAAAATACTCTCAGTCTAACTTCTGAGCTCAATAAAAGTA
AAATTCAACATCATCACAGTAGCAATATTATCAAAGTACGTTCTAGTCTG
CAATAAGCAAtatatacacccctgtttcacagccccgaTGGAGCTTCTTT
AAATAGTACAGAGGATTAAGTATCCCTGTTTCACAACCCCGGTTGAACTT
CTTCCAATAGTGGAGcactggggacgaaatttttgctaaattttccaaTG
TGGCGggggtctgtgacacaagggtgtATATATGGTAAGATATGGATATA
TAGCTTTTAGACCTTTTTCGAAAACTTGGgtcaaacttaaattttgatta
atCCATCTATCCTTAGGTCAAGATGGCACCAGTCAAGCCGGAAGAGGCCG
AAGTGGAGAGCAACCAATCAAACAAAAGTTATCAGCATATCATCTCTGAA
GCGATAGGAGACATGGGGCGTTGGCAGGCGTTTTTAATTTTCGCCCATTT
TACACCCAAGATTGTTATGGCGTGGTGTATGATAATTATTAGTTTCGGAG
GTGCGAAAACAGATTGGTGGAAGCGAACAATGGAAATTGACCCTATAAGT
AAGTAGTTACGCATGCGTAAGAAATCTCAGATTCATAATATGCATCCTTG
CTTTGAAAATTTACCGAGTTACGTAATCTAACTTTTTCTACCCAATTCAT
ATGCATCGCTGTAATCATTTTCCGCTCAAGCCTCTTTTCTTTCGCCGTTC
TTTCTAACTTTTGCTTGTACCAGACGACTACATCATTTATATACTTTTGA
GTCAGTACATTATTTTAGCTCAGGCTGGgtcgttcttaatttttgaaatt
tctaggCTTAAATGACTTTAAcacgcttagtttctttaattaaaaactga
aaatttgttaaaagtaatattttcttagtattttgcgAAATCTGAGGCTC
ATAATGCATTCAAATAGTTCTTAATCTTTGGCAAATATAATCAGCCTCGT
gctcttatgaaattgttcttataaaaaaagcgtgtagtgaTAAAGAAACA
TTGAATGTTTGGATAGAAAGTTTTTACTTAGTTCTTTCACCTTACAGCCA
ATGAAACGTTGTATGTAAACCGTTTAAAAGACTGTTCGCCACTCGGCATA
AACGATTCTATTGTGTATGATAACACGTATACCATAACTGCTGAGGTAAG
CAAATCTGtcttttactttttgacatccctgtctcagtgacccgccTTTG
GATTGTATaaaagcgagtttatgtatttgcacttttgagtacgggaaagt
gactgaagcgattcaAAAAGACCCGCAGTTTTGATCTGCTAAATCGAgaa
cggtaaaagtgctgatttactgtagtcctcagctggtcaggatctggtca
aattagaaccttaccgtctccgtcacagaaaaacagatatacataaactc
gctcTTGTGTACCGtcgtcgttttttataagattctCATTCCCGCACTAg
gattcttgtcacttttccggaACCTTTCCGCTATTTTTTCCGGGATAAAC
GGAATGAGATTAGAAAGGGTTTGTTTCtctaaaggtacggaaaatcttgt
gctAACCCACGAAACTGCCCAACTTTCTGAAGCTCTTTTTTTAACTGCCC
GTAGTTTTTTTCCGatagaaaagtggcaaaggaatcttatacaaaacgac
ggtatGATCACACATACTATAACTGCTGAGGTTAAGGTAATTTTTATAat
aattaaatttggcgggaattaaactagcaaactagtctgttaattaatca
tgtcagagggcacataaaggcggcgggggtttgctagaataggagctgcg
taggagaacgagcaaaagttggcgAGAGGATGCTGATTAAACAGCTTTCA
GCCCTtaccgccgacaaaatttcttcctatgcttacctaactcctacgct
cacttttcccgcgtgataccgttccagcccgactggcgtgccagtctagg
CGGGAATTTAAAATTAGGTGGCTGGCGGAAAAATTAAATCTAGCGGAAAC
TTAATTTGGCTAATTTCGGCCAGATCTGCTAaacccaccaaaatttcttc
ccttaatcCAAGAAATGtagtaataaaaaaaatctaaccTTTTTCGTTTT
ccatttcttattcttttagTGGGATTTGATATGCGGTTTAGATTACATTC
CAACTTGGATTAAAACTTCACAAATGGTTGGCGTGATGGTCGGTGCTGGA
GTGCTTGGCCAACTAGGTAcggatatttttctttcttttttaatagATGG
TTCAAATCGAAGAAGATGATGTGCGGGATTAAACCTCGTATGAAAcacta
gacgatgttatcacccgctacagtgatagtaaaggcgagaaaatatggcg
ttatggcagtaaacggaaaaaaatcggcggaagagtttcgaagactggca
aactctaccgactgtaaactctttatTTCGGCAAAAAGCCTTTAggtttt
tttcttagatagtgatttgtcatagactatagcatagtctaataAAACCC
TAGATCTCGCACTAGATagtcttttaaaaattaaacaatgaagctcaaaa
tcgccaaaaattaagaacagtttaaATACAATGCTGACctaaaattactc
aatttcaagcaattcagGGGTCAAAACAGTAACAATTGGGTATGAAGCCT
ACAACACCACAATTACAACCTATCAATAAAAACAGGAAatgaacaatttg
aggctcaaagtgccaaaaaaaaacaGCCGAGAAAAAAGTGTATCTTTAAT
TTAGTGACGTCACAATATCAGATGGCGTACTATGTTGCTTCAACTCCTGT
AGTCTGCGAGTATAGACTAGttccatttcattttttctatatCTGTGCGA
GATGAGAAAAGTTTCAGTGTCATTCTAATCTTTTAATCTGACAAGCTACT
ATAACCCAAGACTACtagtttcattttctttctgAACCTCttaaaataaa
cacaaatacTACCCTTATTCTGAtcaaaatattcatgatatgcaccactg
gagagtcttctgagaacttctAAAATTTTTCACCCAATAGGTCagttaaa
caatagaaaaagtgacgttattgggtggaacaaaaaccaAAACGTTGCAT
ATCTTATAAATAACAAATACTACCCTTATTATGAtcaaaatattcatgat
atgcaccactggagagtcttctgagaacttctaaaatttttcacccaata
cgtcacttaaacaatagaaaaagtgacgtattgggtggaacaaaaaccaA
AACGTTGCATATCTTATAAATAACAAATACTACCCTTATTATGAtcaaaa
tattcatgatatgcaccactggagagtcttctgagaacttctaaaatttt
tcacccaatacgtcacttaaacaatagaaaaagtgacgtattgggtggaa
caaaaaccaAAACGTTGCATATCTTATAAATAACAAATACTACCCTTATT
ATGAtcaaaatattcatgatatgcaccactggagagtcttctgagaactt
ctaaaatttttcacccaatacgtcacttaaacaatagaaaaagtgacgta
ttgggtggaacaaaaaccaAAACGTTGCATATCTTATAAATAACAAATAC
TACCCTTATTCTAATCAAAATATAATCTATCTCTTCATTAATTCAGGTGA
CTGGATAGGGCGGCAAAAATGTTCATGGTTCGCCTTCACTTTAAGTGTAG
TTTTCATTCTCATACAAGCCTTCAGTGCCAACTGGATTATGATGCTGGTC
TGCGCTTTCGTTGTCGGAATCGGTCTCGGAGGTAAGTGTAACccgatttt
ccccgattttGTTTACTATCCAATGGAGATTTTCACTTTTACTAAGCTAC
GTAGCCAGattttccctgattttcaaactattcaatgaagattttcattt
ttgataaaagttgaTTTCGGAGGTAAGTGTAGCCCGATTTTCTCCGATTT
TCGAACTATCCAATGGAGATTTTCAGTCGACCATCGACCTTTTgcggctg
gcacacaacgtcattTCAACGTTTATGTAATGTTAACAACGTCCATATag
cgttaaatgaacgttgaaaacaacgttgtgtgccagttgggttTTTGAGG
ATAGAAAATCTAATAGCCTTAAGATTTGCGTAGTATTGTCAACAATGGAT
TGAACATGGCTGGAAAGTCGGATAAAATATTTGTATTTCGAGTCTTTCCC
ATGCCGTTCTAAATTACAGGCCTGGTGAACGCGCAGCTATCTCGTTTTTA
TGCAGGCCCAAAATTGGGAACTAACGTAGCATATCAAGGTCAAAAAATGA
AACTGTTTCGTGTTTTAGATATCTAGCTGGTTTTATTAGGGGGAGTTTTG
gaggtacttaatttcgcgaattagaTATTGGAATTATCAAATTTAGCGAA
ATTTAGAACACCATGGTCTTTCCCAAATTCACAAGATTCTTTGCAGTAAC
TTAAAAATCGAAtaaccccagctggcacacagcgttgctttaacgttcaa
ataacgttatttggacgttatgaatgtcaaatggacgttgttttgacgtt
gtgtgccggctgggataGAGTTAACTGtatacaatttcattttcaggtTT
CTTGGTATTAAACTCGATCTACGTTTTGGAATACATTGGAACATCGTGGC
GTTCCGCCATTGGTTTTATTCCATTTTGGGCGTCAGGGGTGGTCATTTTG
GGCGGACTTTATTCCTTGTTACCAAATTGGAGACATTTGTGTATAGCATC
AGCTATTACTGGAGCTCCATTTATTATTTTCATGTGGTAAGtttattaca
cccctgtatcagtgcgACCTTGTCTTTCCATCTAAGATCTTTGGCTTGTA
AATTCCTTCCATGATCCTGAGCAAAACCTCTAAACATTTTTGTCTAATTC
GCAATTATGATAATTTATAATCTCTTAAAAATGTgttcttacacggttct
tacgtcaaaatattattgttttcttgctaaaagtaaaaaatttgtaaGTT
GAAAATCTCGAGCTAGTTGAAAAGGTTTAGAGGTTTAGCTTAGGACTATA
TAAAGAATCTACCAGCCAAtgatctcaaaccatctgataaTCCCTTTGAA
AATCTGTATTATCTTAGTAGGATGTGTGCAGGTATTCTACTCCATCAGCA
AACATTGCAGCTTTGAGTTATAAtcattgagttttaagcccgaagggcta
gaggtgaaactttaacctttctcaggcaagagaaattaaaGCTACTTTTC
TCCCATCAAAAACGCTCAAAGAACAAGCCGTAATCATGACgccggattgt
atctagcggttcttttgttttggaggactacattttttgaaatctagcga
tagattttagtttcaatccggcgtttgtgtaaaaactacgcgcgggcatt
ctggatgggaaataagtggtttcatttccatccaggagtctcgcctctag
cccttcgggcttgaaactcaatggttataaTGCCCTAGTCTTAGGGGGTT
GGATctgagattttccaaaaaatcctGTCAGGGTCTTTTGGCTTTCCCCT
CAGCTGGGAGGTGGTGTAAATTACTCTCTATAATCCGAAGATTTTTGATC
CCTTGaagattgaattagagagagagtcaaTTGATAGTAAATTCTCTTTC
TCAGGTTAACACCGGAGAGCATCAGATGGCTTTTACAGCACGGTAAAACA
GAGCAAGCAGTTGAAGTGgtggaaaaaattgcaaaacatAACAAGCGGGC
GAAACCAGATCTCACGGACTTAAAAGCGGTCGCCGATCAAGAAAGTTCAA
AATTAAAAGAGAACGCTCTGAAATACAATTATATGACTTTATTCAAATTC
AAAGCTACAAGATGGAGATGTCCATTATTTGGCTTTTTCTGGtaagttga
aaatttttgtcagaaaaaaaagttcacaAAGTCTAATAaacttttggttt
gttttgaatttttctctGATCCTTAACCTATAGAGGCCATAGAGTGTCGC
TGGCATATTGAATGAGCTGTGCTAAGGGAAGGTTTATCTCTCTCAGCTCG
ATTTTTTCGGTTCTGTTCCTATAGGGGTGGACCTAGGAGTGCTGGGACCT
ATGTCACCCTGTGGCATTTttcacttaagggctctggacatacccaattt
ttcgattttataccaacttaaatggcaatttctgtattttaaaaagatta
atgtataactttttttatatgtcctgttagacctacctttttagaattta
aaaatcgaaaaattgaaatgaaaaaatcaaatgaagaacaaaacgaagag
tttttcgaaaaagagtatttcacctttcaaagccctaatctcggtataaa
tcaaacattttggaattttttttggttcaggtgatgtatctatttaatat
ctaaaaatacaatttcggaaaatttttgtggaagtatctttactttaaaa
tctccaaaaaacctcatttttggcaattttcttgggatgtagccaaatag
aaaatttttccgaaaaaatccaaataaagaaattatttgtcattatctta
gaaaaagtttgaaacaataaaatgatttccccaaggagattaggcttttt
tgtgaaaaataaatgtttttttttataagcatacaaaaatccgaaaacag
gctcagagatgcttaggtcgaaagcttaataaggctgaaaaatgcttgag
gggatgcttaaatctaaagtataaatttaggaaaatactgaaaatccgta
aaattccagccaaaaaaagccagaatcaggaaaaatacatttttcttaGG
CTCAAGTAATttttgccatatgcttaatttttccccatatctgagcctag
atatgcttataagtgcaatgcttataaaaaaaacatgtaccacagggata
actggcttgtggcagccaagcgttcatagcgacgttgctttttgtatatg
aatagcgtcgttttgacgttttattaaggtccatgtcacacttattcctt
aattactcatgatgtaattacttaaattcattttttcaaaagcagtttgt
tcttaaacatgccaaagaagcgaaaacataagattttatcttcaaattct
gaaatttatttctcactatgaccagagcccttaatttgGATGCGCGTGcg
catttgaaatcaaaaactgtttgaaaattcaaagttaCGTTATGACATTT
TATGAGTTAAGATTCATTTCCAGAGCTACTTTAAATGAAAACGATTAAAA
GGGACGACAAGTCTTTTTCAAAACACATAAAACTTCTGTATcagtatttt
taaaaaggaattttactGGTAAATACAGTCTCCAGGCAACTCCCCGGACG
GTACCCCAAGGAAAGCCGTTTTTCgaattttgatgtatttttacgTGCCC
AAAAGCTCCCAATGGAAAATGGATGGCAATCAATGAGAATACTCCCCTGA
CAATCAATCTTCTTTTCCTTCTAGGTTCACATGCGCTTATTCGTATTATG
CATTGACTTTTGGAGTTAGCTTGTTATCAGGTAATCCAGCAGCTAATATG
TCACTAATGGGCGTCGGCGAAGGGTGCAGCTTGATTATGTGTTGGGCGTT
GACTAAAAAGtaagtaaaatttctttttataagaatgagtAAGGTTTTGG
GTAAATTTATAACTAAGGATTGGCTTTAAAGCTTCGCAAAGTAACCTGAA
GACTTCAAAGATGTTTTTCGTGACCCTGCGATCATCTGTCCTGATTGGCT
TTAAAGCTTCGATTGCTTTACTTTAGCCGATCACAGCGCTCAATATTCAT
CCAAAATCTGGAAAGCCATCGAAAAGAACCGTCTCCTTTCGCTTACGGGG
CCATGACCTTTAGATCGAATAGCTGTCGTACGGGGAGTATTTAAAGGATC
TATTACACCTGCTGGACTTTCTTTCCGGTGTGGCGGTATATCCCCTTTTC
AAATATAGTTGATACTCTCTGAGTGACGTTCTACAAacctagactagcaa
gcgtctgtctttctttggacacaggaacgcaggaatagtgcttataaaga
gttcttataaaaaatagaaattgccgcgggagagttgTGTGgtttgtatt
cagtgaacatatagacATAGAGCCCATTGCAAGCTTAAGCTgtagcgaaa
tacaacgacgtggtttactagccAAAGCAAACCCTaccttttgatattaa
caaaggaaaaagctagcaaaaagttaaaaacaataAGCCTCCAGACCAGa
gttttatacggactatgatgTAATTGAAGCTGAACTTCCTACTTTCATTC
CACTTTAGATTTGGTCGAAAATACACAACAGTTATCCTATTCACGTGCAC
CGCTCTCTCCTCCTTCGTCATCACTATCGGTTACGCTACCAAAGCAGAAG
ATTCGGAGACGATAAAGACAGTTTGTGCATTGGTATCTAGGCTATTTCTA
TCAGGAGCCTGGGGTTCACTTATCATCTACACTGTAGAAATATTCCCTAC
AATGTTGAGGTTAGTATAACGAGGGCATTGGTATCTAGGCTATTTCTATC
AGGAGCCTGGGGTTCACTTATCATCTACACTGTAGAAATATTCCCTACAA
TGTTGAGGTTAGTATAACGAGGGTATTGGTATCTAGGCTATTTCTATCAG
GAGCTTGGGGTTCACATATCATCTACACTATAGAAATATTCCCTACAATG
TTGATGTTAGTATAAAGAGGGTATTGGTATCTAGGCTATTTCTATCAGGA
GCTTGGGGTTCACATATCATCTACACTATAGAAATATTCCCTACAATGTT
GAGGTTAGTATAAAGAGGGTATTGGTATCTAGGCTATTTCTATCAGGAGA
TTGGGGTTCACTTATCATCTACACTATAGAAATATTCCCTACAATGTTGA
GGTTAGTATAAAGAGGGTATTGGTATCTAGGCTATTTCTATCAGGAGGTT
GGGGTTCACTTATCATCTACACTATAGAAATATTCCCTACAATGTTAAGG
TTAGTATAACGAGGGTATTGGTATCTAGGCTATTTCTATCAGGAGCCTGG
GGTTCACTTATCATCTACACTATAGAAATATTCCCTACAATGTTGAGGTT
AGTATAACGAGGGTATTGGTATCTAGGCTATTTCTATCAGGAGCCTGGGG
TTCACTTATCATCTACACTGTAGAAATATTCCCTACAATGTTGAGGTTAG
TATAAAGAGAGTATTGGTATCTAGGCTATTTCTATCAGGAGCTTGGGGTT
CACTTATCATCTACACTGTAGAAATATTCCCTACAATGTTGAGGTTAGTA
TAACGAGGGTATTGGTATCTAGGCTATTTCTATCAGGAGCCTGGGGTTCA
CTTATCATCTACACTGTAGAAATATTCCCTACAATGTTGAGGTTAgtata
aagatttttttagtatttaGGCTATCTTTCATACGTTAACAAATACCCGT
CGGCTGAATTTAAAGCCTCGGAGGACCTAAAGACATAAAacttttgggtg
ggaaattaaGCCACTTATTTCAGATCACGAAATATTTAGGTCAATGAATT
TGGTGACTCAGCTGAAATTATTCATCCTAAAACCCAAATATTTCATGATA
TACTATAATAAGTTAGTACGTTTCAAGACCCATGGCTTTGGTATTTAGGT
TATTTCCATATATACGTTCACGTATACCAGTCGGCTgaatcattgagttt
aaagcctcgATATAAATTTTGGGTGGGACATTAAGCCACTATTTCTCATC
CATAACTCACGAACCGCGTGGTTTTAACACAGAAGCCACGCCGTATTGGT
AGGGGAAACTATCGCCagatttagaaaaatgttcCGTGTAAAaacgctag
attcaatctgtcattccAAAAACAGCGCAAATGTTCACTTTTTCTTCGTC
TGAGAAAGTTTGAAGATTCCACTCTGGCCCATTCGACCAATAatccttaa
aaataaaaaaatatggcCAGCTCAACACTGAGCCTTCTCGAAATTTTGCT
CTCAACTTACTGGTAAATTCAGTCTCCAGGCAGCTCCCTGGACGGTAACC
CAAGGAATGAGAAGAGCCCTAAAATTTAGACAAAGCGAAGTTAAAGTGAT
GCgaaaaataccttatcggggaaaacttcgtcggggaaaagtgacgaata
ttttttcccaacgaaaattttccccgacgcagcccgacgaagttttcccc
gataaggtagtctaacagtaaaatattttacttttaattgTTCAGGTCAT
CAGCCTACGGTTTCGTTTCGATTTGCGGCCGAATCGGTGGTATCGTGGCT
CCGCAATCCGCTCCACTTTATGACGTAGCAAAACATCTGCCTTACACCAT
CAATGGCGTTTTGGGCGGTCTTTGCGCCCTAGGTGTCCTGCTTCTCCATG
ATACGGCTACACAAGATCTGCAAGATAAAAtggatgaagatgaagaaggg
taagttttcattgaaaagtctGTTATTTATGTTTGGGAAATTGAGGCAAT
TATATTAAGTTGTCTATAGAAAAGTCTGTTTGATGTGCTTGAAAAACCGA
GGCGAAATGCGTAGTTTCGACACACCTAGTTTCGTAGTTACTTTAACTGA
GGAATCAAAGaagaaagttttatataatCTGATTGAGGCagctacacttt
ttttataaaaacgtaCAAAACTTTCGaggccttcgaatgttcttaactat
aactttctgagtttttaaaactaaaaatggTTCTTAATATGCTTTTCATG
GTTTCTGCCTACTTTTTCAGTCCcccttaaaatgcaattttgcccTTAAA
GAAAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNCAAATATTTTAGTCCccccttttttcttattttgatagattc
ttgcagcccttgataaagaatccccccttatttaaaaaaaatgacaaaaa
tcccCCCTATtttaaaaggcaatttttttgacccccccttattttaaggg
gggggggggcagaaacCATGACTTTTGTGAATATTATTACAACTGCCTTA
GAAATTCGGTGTTTTGGTGGatagtccgcaaagccttaaaacgttcttaa
aCTTGTGCTTAATACTTAAGCCAtccaagccttatgttcttatatagttt
gttcttataaaaatattttttttttttgcagggATCTCAAGAAAGAAGAT
ACGACagtgtaaaaaaaatttgtcgaAAATATACCCAGTTGGACATCTTA
CCTTTGAAAAGGAGACTCTAAAATCCATCGTAAAACAGACAAAGTTTTTC
TCATGAGGCCCCCCCAAGCGGATTtcgtgatgacgtgatagggGCTTTtt
tagcgtgattacgtgatttgggaATTGTTTTTTCGTGATTTCGTGATGAG
GTGGAAACgtgatttgaaagtttttttgagccgtgatgcgtgatttggag
GGATGGTTGATTgtccatttttttgctgattttcgtaatcgtgattgaag
acaaaaaattgcgtgatatcgtgattaGAGTTACCGCTAGGGGTGCCTCA
TGTATCAATCTCGTGTTTCAGTGCCCGAGTAATTTCCACTTCCATGATAG
AAATTATGCTTTTTGATCATGCCAAAAAATTTACTTTAGCTTTATACTGG
GGAAATTTctagaaatatttatttttttatcatttcgtCCTCCAAAAACG
TAAATGTTTGAGGAATTTTAtaatctaattttttacaagattttatGTCG
TCTAAACTCGTGTATCAtgtatattttttaaagatacgattttttacaga
aagattttgaagatttttataGAAATAAAATACAGTCGAACACGAACGGG
GGAGCAAatatgttcgagttaag
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_016312XLOC_016312Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00028762-exon-sc0000703-1491911889:171413..171478TCONS_00028762-exon-sc0000703-1491911889:171413..171478Clytia hemisphaericaexon
TCONS_00028762-exon-sc0000703-1510915933:171413..171478TCONS_00028762-exon-sc0000703-1510915933:171413..171478Clytia hemisphaericaexon
TCONS_00028762-exon-sc0000703-1575043694:171413..171478TCONS_00028762-exon-sc0000703-1575043694:171413..171478Clytia hemisphaericaexon
TCONS_00028762-exon-sc0000703-1491911889:173529..173760TCONS_00028762-exon-sc0000703-1491911889:173529..173760Clytia hemisphaericaexon
TCONS_00028762-exon-sc0000703-1510915933:173529..173760TCONS_00028762-exon-sc0000703-1510915933:173529..173760Clytia hemisphaericaexon
TCONS_00028762-exon-sc0000703-1575043694:173529..173760TCONS_00028762-exon-sc0000703-1575043694:173529..173760Clytia hemisphaericaexon
TCONS_00028762-exon-sc0000703-1491911889:174260..174357TCONS_00028762-exon-sc0000703-1491911889:174260..174357Clytia hemisphaericaexon
TCONS_00028762-exon-sc0000703-1510915933:174260..174357TCONS_00028762-exon-sc0000703-1510915933:174260..174357Clytia hemisphaericaexon
TCONS_00028762-exon-sc0000703-1575043694:174260..174357TCONS_00028762-exon-sc0000703-1575043694:174260..174357Clytia hemisphaericaexon
TCONS_00028762-exon-sc0000703-1491911889:175332..175428TCONS_00028762-exon-sc0000703-1491911889:175332..175428Clytia hemisphaericaexon
TCONS_00028762-exon-sc0000703-1510915933:175332..175428TCONS_00028762-exon-sc0000703-1510915933:175332..175428Clytia hemisphaericaexon
TCONS_00028762-exon-sc0000703-1575043694:175332..175428TCONS_00028762-exon-sc0000703-1575043694:175332..175428Clytia hemisphaericaexon
TCONS_00028762-exon-sc0000703-1491911889:176859..176993TCONS_00028762-exon-sc0000703-1491911889:176859..176993Clytia hemisphaericaexon
TCONS_00028762-exon-sc0000703-1510915933:176859..176993TCONS_00028762-exon-sc0000703-1510915933:176859..176993Clytia hemisphaericaexon
TCONS_00028762-exon-sc0000703-1575043694:176859..176993TCONS_00028762-exon-sc0000703-1575043694:176859..176993Clytia hemisphaericaexon
TCONS_00028762-exon-sc0000703-1491911889:177809..177998TCONS_00028762-exon-sc0000703-1491911889:177809..177998Clytia hemisphaericaexon
TCONS_00028762-exon-sc0000703-1510915933:177809..177998TCONS_00028762-exon-sc0000703-1510915933:177809..177998Clytia hemisphaericaexon
TCONS_00028762-exon-sc0000703-1575043694:177809..177998TCONS_00028762-exon-sc0000703-1575043694:177809..177998Clytia hemisphaericaexon
TCONS_00028762-exon-sc0000703-1491911889:178867..179103TCONS_00028762-exon-sc0000703-1491911889:178867..179103Clytia hemisphaericaexon
TCONS_00028762-exon-sc0000703-1510915933:178867..179103TCONS_00028762-exon-sc0000703-1510915933:178867..179103Clytia hemisphaericaexon
TCONS_00028762-exon-sc0000703-1575043694:178867..179103TCONS_00028762-exon-sc0000703-1575043694:178867..179103Clytia hemisphaericaexon
TCONS_00028762-exon-sc0000703-1491911889:180687..180821TCONS_00028762-exon-sc0000703-1491911889:180687..180821Clytia hemisphaericaexon
TCONS_00028762-exon-sc0000703-1510915933:180687..180821TCONS_00028762-exon-sc0000703-1510915933:180687..180821Clytia hemisphaericaexon
TCONS_00028762-exon-sc0000703-1575043694:180687..180821TCONS_00028762-exon-sc0000703-1575043694:180687..180821Clytia hemisphaericaexon
TCONS_00028762-exon-sc0000703-1491911889:181521..181721TCONS_00028762-exon-sc0000703-1491911889:181521..181721Clytia hemisphaericaexon
TCONS_00028762-exon-sc0000703-1510915933:181521..181721TCONS_00028762-exon-sc0000703-1510915933:181521..181721Clytia hemisphaericaexon
TCONS_00028762-exon-sc0000703-1575043694:181521..181721TCONS_00028762-exon-sc0000703-1575043694:181521..181721Clytia hemisphaericaexon
TCONS_00028762-exon-sc0000703-1491911889:183458..183661TCONS_00028762-exon-sc0000703-1491911889:183458..183661Clytia hemisphaericaexon
TCONS_00028762-exon-sc0000703-1510915933:183458..183661TCONS_00028762-exon-sc0000703-1510915933:183458..183661Clytia hemisphaericaexon
TCONS_00028762-exon-sc0000703-1575043694:183458..183661TCONS_00028762-exon-sc0000703-1575043694:183458..183661Clytia hemisphaericaexon
TCONS_00028762-exon-sc0000703-1491911889:185594..186285TCONS_00028762-exon-sc0000703-1491911889:185594..186285Clytia hemisphaericaexon
TCONS_00028762-exon-sc0000703-1510915933:185594..186285TCONS_00028762-exon-sc0000703-1510915933:185594..186285Clytia hemisphaericaexon
TCONS_00028762-exon-sc0000703-1575043694:185594..186285TCONS_00028762-exon-sc0000703-1575043694:185594..186285Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000703supercontigsc0000703:171413..186285 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0	0	0	0	0	0	0	0	2.24197e-10	0	0	0.895957	0	0	0.0121886	0	0	0	0	1.13035	1.74376	0	0	6.17339e-09	0.746454	0	0	0	0
Blast
[Close]
BLAST of TCONS_00028762 vs. Swiss-Prot (Human)
Match: S22AF (Solute carrier family 22 member 15 OS=Homo sapiens GN=SLC22A15 PE=2 SV=1)

HSP 1 Score: 129.413 bits (324), Expect = 2.709e-31
Identity = 125/468 (26.71%), Postives = 218/468 (46.58%), Query Frame = 1 
Query:  148 EAIGDMGRWQAFLIFA-HFTPKIVMAWCMIIISFGGAKTDWWKRTMEIDP--------ITNETLYVNRLKDCSPLGINDSIVYDNTYT-ITAEWDLICGLDYIPTWIKTSXXXXXXXXXXXXXXXXDWIGRQKCSWFAFTLSVVFILIQAFSANWIMMLVCAXXXXXXXXXXXXXNSIYVLEYIGTSWRSAIGFIP--FWASGVVILGGLYSLLPNWRHLCIASAITGAPFIIFMWLTPESIRWLLQHGKTEQAVEVVEKIAKHNKRAKPDLTDLKAVADQESSKLKENALKYNYMTLFKFKATRWRCPLFGFFWFTCAYSYYALTFGVSLLSGNPAANMSLMGVGEGCSLIMCWALTKK--FGRKYTTVILFTCTALSSFVITIGYATKAEDSETIKTV----CALVSRLFLSGAWGSLIIYTVEIFPTMLRSSAYGFVSICGRIGGIVAPQSAPLYDVAKHLPYTI 1497
            +A+G+MG +Q +L F      ++ +A   I+I+  GA   +     E+ P           +  + + L   +   I+  + + +++T I +EW LI    Y  +   +    GV VG    GQL D  GR+K     F L ++F +   FS ++    V  F+VG+  GG  ++  + + E +GT++ +  G I   F+A G+     L   + +WR L I   + G    +     PES RWL   G+  +A E +  IAK N++ K   +    +    +   +E     +++ LF+++       +  F WF C+  YY LT     L G+  AN++L G+ E  S  +C  L  +  FGRK T         L+  ++   +  + +D+     V     +L+ +L +S A+  + IYT E++PT++R+   G  S+  R+GGI+AP    L  V   LP+ +
Sbjct:    8 QAVGEMGIYQMYLCFLLAVLLQLYVATEAILIALVGATPSYHWDLAELLPNQSHGNQSAGEDQAFGDWLLTANGSEIHKHVHFSSSFTSIASEWFLIANRSYKVSAASSFFFSGVFVGVISFGQLSDRFGRKKVYLTGFALDILFAIANGFSPSYEFFAVTRFLVGMMNGGMSLVAFVLLNECVGTAYWALAGSIGGLFFAVGIAQYALLGYFIRSWRTLAILVNLQGTVVFLLSLFIPESPRWLYSQGRLSEAEEALYLIAKRNRKLKCTFS----LTHPANRSCRETG---SFLDLFRYRVLLGHTLILMFIWFVCSLVYYGLTLSAGDLGGSIYANLALSGLIEIPSYPLCIYLINQKWFGRKRTLSAFLCLGGLACLIVM--FLPEKKDTGVFAVVNSHSLSLLGKLTISAAFNIVYIYTSELYPTVIRNVGLGTCSMFSRVGGIIAPFIPSLKYVQWSLPFIV 466
The following BLAST results are available for this feature:
BLAST of TCONS_00028762 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
S22AF2.709e-3126.71Solute carrier family 22 member 15 OS=Homo sapiens... [more]
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