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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00028601 ID=TCONS_00028601|Name=TCONS_00028601|organism=Clytia hemisphaerica|type=transcript|length=1011bp
ATCAGGCTTGTCAAAAACTAGAGACTCTTCGCAATCAAACACTCTTCAAA
CAATCACAACTAGCTGAGCAATCAAATCGGCTGAAAGCTTCATTAAACAC
AAACAATGAACAAATACAAAGCTTGCAACACGTGATCGATGAATGGGCCA
ATCAGAGAACAGACGGCATTCGAAACCGTGTTAATTTCATGTACGAATCA
CTAACAACGGACGTCAATAGTATGTCATTCAGTACGAAATATAAACACGC
AAAACGACATTTGACACTTCAAGACAATGATCAGAAGAATAATGAAAAGT
AGGTCTTCATTCACTTTCTCCTGATATTTCTTTTTGCGCTAGagcattga
aacaatgaaaagtaGGTCCTCGTCACTGAACTTTCTATACCCTGAACCAA
GCTAtacccgccatctttgatcgaagacttttttggaattggtacccgag
aagaagccattgcaatgttaaaaattaacgtctaacggcgctacatcatc
gaAAGTgttcgaggaaaagtagatctagcacCCTCAATgcattttcaccg
ctattgagtagtgctaccattagggtgccactttcaaaaaaactccgatc
aaagattttgcttggccaggTCAGTCGTCCTCGTTCACTTTCTCCTGATA
TTTCTTTTTGCACAAGAGGATGTAGCAttgaattcaaatctttcccaggc
aggaaaaagtgaaaccttatcTTCCAATCCAATAGAAATGCTTTTAGCCC
CtttgaattcaaatctttcccaggcaggaaaaagtgaaaccttatcTTCC
AATCCAATAGAATCGATTTTAGCCCCtttgaattcaaatttttcccaggc
aggaaaaagtgaaaccttatcTTCCAATCCAATATAATCGATTTTAGCCC
CTTTGAATTAAAATCTTTCCCAGGcaggaaaaagtgaaaccttatcTTCT
AATCCAATAGAATCGATTTTAGCCCCtttgaattcaaatctttcccaGGC
AGGAAAAAGTG Run BLAST on NCBI transcript from alignment at sc0000693:53834..54844+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00028601 ID=TCONS_00028601|Name=TCONS_00028601|organism=Clytia hemisphaerica|type=transcript|length=1011bp|location=Sequence derived from alignment at sc0000693:53834..54844+ (Clytia hemisphaerica)
ATCAGGCTTGTCAAAAACTAGAGACTCTTCGCAATCAAACACTCTTCAAA
CAATCACAACTAGCTGAGCAATCAAATCGGCTGAAAGCTTCATTAAACAC
AAACAATGAACAAATACAAAGCTTGCAACACGTGATCGATGAATGGGCCA
ATCAGAGAACAGACGGCATTCGAAACCGTGTTAATTTCATGTACGAATCA
CTAACAACGGACGTCAATAGTATGTCATTCAGTACGAAATATAAACACGC
AAAACGACATTTGACACTTCAAGACAATGATCAGAAGAATAATGAAAAGT
AGGTCTTCATTCACTTTCTCCTGATATTTCTTTTTGCGCTAGagcattga
aacaatgaaaagtaGGTCCTCGTCACTGAACTTTCTATACCCTGAACCAA
GCTAtacccgccatctttgatcgaagacttttttggaattggtacccgag
aagaagccattgcaatgttaaaaattaacgtctaacggcgctacatcatc
gaAAGTgttcgaggaaaagtagatctagcacCCTCAATgcattttcaccg
ctattgagtagtgctaccattagggtgccactttcaaaaaaactccgatc
aaagattttgcttggccaggTCAGTCGTCCTCGTTCACTTTCTCCTGATA
TTTCTTTTTGCACAAGAGGATGTAGCAttgaattcaaatctttcccaggc
aggaaaaagtgaaaccttatcTTCCAATCCAATAGAAATGCTTTTAGCCC
CtttgaattcaaatctttcccaggcaggaaaaagtgaaaccttatcTTCC
AATCCAATAGAATCGATTTTAGCCCCtttgaattcaaatttttcccaggc
aggaaaaagtgaaaccttatcTTCCAATCCAATATAATCGATTTTAGCCC
CTTTGAATTAAAATCTTTCCCAGGcaggaaaaagtgaaaccttatcTTCT
AATCCAATAGAATCGATTTTAGCCCCtttgaattcaaatctttcccaGGC
AGGAAAAAGTG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00028601-exon-sc0000693-1491911889:53834..54844 | TCONS_00028601-exon-sc0000693-1491911889:53834..54844 | Clytia hemisphaerica | exon |
| TCONS_00028601-exon-sc0000693-1510915933:53834..54844 | TCONS_00028601-exon-sc0000693-1510915933:53834..54844 | Clytia hemisphaerica | exon |
| TCONS_00028601-exon-sc0000693-1575043694:53834..54844 | TCONS_00028601-exon-sc0000693-1575043694:53834..54844 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000693 | supercontig | sc0000693:53834..54844 + |
Blast
The following BLAST results are available for this feature:
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