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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00028382 ID=TCONS_00028382|Name=TCONS_00028382|organism=Clytia hemisphaerica|type=transcript|length=784bp
GTATGAAGCTTGAAAATCATCCGAACAATCATTTGGAAGAAGAAAGTAGA
AGAAATCGAAGCAAGAAACAACCTGACTGAAGGTATTCATTGGAAGACAA
TGAAGATCAATCATATCATCCTCATCGCTTTGGCTTTCATTGCAACAACT
TCGGCATGTCGTTATCCTAAATGGCCTGAAGAGTTCCGATGGCATTCGGC
TGGAGCAATTGATGGCATGACTTGTACTCATATTCATGAGAGTGCAGATC
GAACGGGCACATGGCATGATAATTATTTCTGTGCCGTTTCAGCTCCTGGT
ATTCAGGGTGTTGGTATGAGATGGTCATCTGCCGGGCCTATTGCAGGGAT
GAGATGTACATACATCGTGGAACGTGCTGAACCTCTTCACACAACATGGC
TTGACAACTATTTGTGTGTGCCAAATAATTCTCCATTTCACTTCTCCTGG
TCATCCGCTGGACCAATCAAAGGGAAGAAATGTATCAGATGGTACGAATC
TGCTGACCCACACACATGGCACGACAATTATCTCTGCATGTAAACAACAA
GGAAAGGGAATGTGAATGTAACGGTTAtttgtattttaatatttttacgT
CTTTATACGTAGTGTAAGCATAGCCATATGCCATCTTTGTCATGTATTTA
AACTACTactcttattttcatttttttataatatctttagtcctctctta
ttttccaaataaattttattttcactttgtATGATGTCTAATCATCATCT
GAATagagaaaataaatttcttcgGGTGAAAAGT Run BLAST on NCBI protein sequence of TCONS_00028382-protein >TCONS_00028382-protein ID=TCONS_00028382-protein|Name=TCONS_00028382-protein|organism=Clytia hemisphaerica|type=polypeptide|length=147bp
MKINHIILIALAFIATTSACRYPKWPEEFRWHSAGAIDGMTCTHIHESAD
RTGTWHDNYFCAVSAPGIQGVGMRWSSAGPIAGMRCTYIVERAEPLHTTW
LDNYLCVPNNSPFHFSWSSAGPIKGKKCIRWYESADPHTWHDNYLCM Run BLAST on NCBI transcript from alignment at sc0000675:34607..36040- Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00028382 ID=TCONS_00028382|Name=TCONS_00028382|organism=Clytia hemisphaerica|type=transcript|length=1434bp|location=Sequence derived from alignment at sc0000675:34607..36040- (Clytia hemisphaerica)
GTATGAAGCTTGAAAATCATCCGAACAATCATTTGGAAGAAGAAAGTAGA
AGAAATCGAAGCAAGAAACAACCTGACTGAAGGTATTCATTGGAAGACAA
TGAAGATCAATCATATCATCCTCATCGCTTTGGCTTTCATTGCAACAACT
TCGGCATGTCGTTATCCTAAATGGCCTGAAGAGTTCCGATGGCATTCGGC
TGGAGCAATTGATGGCATGACTTGTACTCATATTCATGAGAGTGCAGATC
GAACGGGCACATGGCATGATAATTATTTCTGTGCCGTTTCAGCTCCTGGT
ATTCAGGGTGTTGGTATGAGATGGTCATCTGCCGGTAAGGATTGTTTAAA
TTTCCTGAGCTTTCAGAGCTATATCTCGACCGTACGTCGTCATACTCTCC
GGTCGGTAGAGATACCTCACGGAAAATTTGACCGGCTGAAAACGCCGTAC
GGCCCGGCAATCGTCCGGTCAGATTGNTCTGGAAAATATGACCGGCTGAA
AACGCCGTACGGCCCGGCAATCGTCCGGTCAGATTGTAGAAGGACGAGGC
AGCGTCCACTATAAAAAGGTCACTTTTTCTACCTTTTTATGGCTATTTTT
GGCCAGGAAGGGCAGTGTCCAATTACTGGACGCTTAAAAAGGCATGAATG
GCGAGATAGTGTCTGATAGATACCGTCATTTCGTTACCACGCAATGAAGA
AGAATGATTAAAACACGGAACTGTTTAGTCTTCTCGTGGATGATTTAAGT
GAAAAAAATAAAACAAAAATGTATTTAAAATTATTCTTTTTTATGACATA
GAGATGAGGCACGCTTCTATGCTGACAAAGCAAAATAAAGAATAGAATTT
CTCAAAGTTTGTGCTCGCGTGGCGCAGAAGAGCAAAAGAATTATTTTGCT
TGTTTAAGAATGCTTTGTAGGTCAAAGGAATAAGGAGATACGTCCTTTAT
AAAAGTCTCACCAAAATGTCTTTCACTTTTTCAGGGCCTATTGCAGGGAT
GAGATGTACATACATCGTGGAACGTGCTGAACCTCTTCACACAACATGGC
TTGACAACTATTTGTGTGTGCCAAATAATTCTCCATTTCACTTCTCCTGG
TCATCCGCTGGACCAATCAAAGGGAAGAAATGTATCAGATGGTACGAATC
TGCTGACCCACACACATGGCACGACAATTATCTCTGCATGTAAACAACAA
GGAAAGGGAATGTGAATGTAACGGTTATTTGTATTTTAATATTTTTACGT
CTTTATACGTAGTGTAAGCATAGCCATATGCCATCTTTGTCATGTATTTA
AACTACTACTCTTATTTTCATTTTTTTATAATATCTTTAGTCCTCTCTTA
TTTTCCAAATAAATTTTATTTTCACTTTGTATGATGTCTAATCATCATCT
GAATAGAGAAAATAAATTTCTTCGGGTGAAAAGT Coding sequence (CDS) from alignment at sc0000675:34607..36040- >TCONS_00028382 ID=TCONS_00028382|Name=TCONS_00028382|organism=Clytia hemisphaerica|type=CDS|length=888bp|location=Sequence derived from alignment at sc0000675:34607..36040- (Clytia hemisphaerica)
GGCCTATTGCAGGGATGAGATGTACATACATCGTGGAACGTGCTGAACCT
CTTCACACAACATGGCTTGACAACTATTTGTGTGTGCCAAATAATTCTCC
ATTTCACTTCTCCTGGTCATCCGCTGGACCAATCAAAGGGAAGAAATGTA
TCAGATGGTACGAATCTGCTGACCCACACACATGGCACGACAATTATCTC
TGCATGTAAATGAAGATCAATCATATCATCCTCATCGCTTTGGCTTTCAT
TGCAACAACTTCGGCATGTCGTTATCCTAAATGGCCTGAAGAGTTCCGAT
GGCATTCGGCTGGAGCAATTGATGGCATGACTTGTACTCATATTCATGAG
AGTGCAGATCGAACGGGCACATGGCATGATAATTATTTCTGTGCCGTTTC
AGCTCCTGGTATTCAGGGTGTTGGTATGAGATGGTCATCTGCCGGGCCTA
TTGCAGGGATGAGATGTACATACATCGTGGAACGTGCTGAACCTCTTCAC
ACAACATGGCTTGACAACTATTTGTGTGTGCCAAATAATTCTCCATTTCA
CTTCTCCTGGTCATCCGCTGGACCAATCAAAGGGAAGAAATGTATCAGAT
GGTACGAATCTGCTGACCCACACACATGGCACGACAATTATCTCTGCATG
TAAATGAAGATCAATCATATCATCCTCATCGCTTTGGCTTTCATTGCAAC
AACTTCGGCATGTCGTTATCCTAAATGGCCTGAAGAGTTCCGATGGCATT
CGGCTGGAGCAATTGATGGCATGACTTGTACTCATATTCATGAGAGTGCA
GATCGAACGGGCACATGGCATGATAATTATTTCTGTGCCGTTTCAGCTCC
TGGTATTCAGGGTGTTGGTATGAGATGGTCATCTGCCG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this transcript:
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00028382-exon-sc0000675-1575043694:35707..36040 | TCONS_00028382-exon-sc0000675-1575043694:35707..36040 | Clytia hemisphaerica | exon |
| TCONS_00028382-exon-sc0000675-1575043694:34607..35056 | TCONS_00028382-exon-sc0000675-1575043694:34607..35056 | Clytia hemisphaerica | exon |
| TCONS_00028382-exon-sc0000675-1510915933:35707..36040 | TCONS_00028382-exon-sc0000675-1510915933:35707..36040 | Clytia hemisphaerica | exon |
| TCONS_00028382-exon-sc0000675-1510915933:34607..35056 | TCONS_00028382-exon-sc0000675-1510915933:34607..35056 | Clytia hemisphaerica | exon |
| TCONS_00028382-exon-sc0000675-1491911889:35707..36040 | TCONS_00028382-exon-sc0000675-1491911889:35707..36040 | Clytia hemisphaerica | exon |
| TCONS_00028382-exon-sc0000675-1491911889:34607..35056 | TCONS_00028382-exon-sc0000675-1491911889:34607..35056 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000675 | supercontig | sc0000675:34607..36040 - |
Blast
The following BLAST results are available for this feature:
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