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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00028284 ID=TCONS_00028284|Name=TCONS_00028284|organism=Clytia hemisphaerica|type=transcript|length=539bp
AGAAACCACTTAGAAGAAAATCTTTCACGGCTAAAATAATGGTTTCATGT
CAACCAATCAATGAGCTGGATTATGATGGTATTATCACGTGACTGGACTA
AAGTTGAAACCGTTGATTGGAGACGATTGCTTTCAAATCGCTATAAATAG
TTAATACTGAATCGAGGAAAAACAATCAGTCGAGTTCATCGATGCAAATG
GTTATTCTTGGTACGAAAAAGACTCTTCAGAAATtaggaaaattttcatt
aaatgatACGAAAAAAAAGGATAAAGATGTATTCTTTCTTATGATATGGA
TATGCTGACAGAGCACAACTAACAttaaaatttccgaaaatttaTTATTA
CCGCAATATCCTGAAGTTTTCATACGATAGGataaacaagaaatttttcg
gTCAAGAATGTTGAATTTCGTGACATTATTAGAAGCACTCTCCCAGCTGa
cacgcaacgttgtttcaacgtttatctaacgttatatggacgttgtgaat
atcagaaaacgttgaaacgatgttgtgtgccagctgggc Run BLAST on NCBI transcript from alignment at sc0000672:166708..167719- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00028284 ID=TCONS_00028284|Name=TCONS_00028284|organism=Clytia hemisphaerica|type=transcript|length=1012bp|location=Sequence derived from alignment at sc0000672:166708..167719- (Clytia hemisphaerica)
AGAAACCACTTAGAAGAAAATCTTTCACGGCTAAAATAATGGTAAGCTCA
AAGTTTTTCTTGGTGAGACATTTCTTTCTTTATTTTTTGTCATAAATTTC
TGCGAGAATTTAGACTCGCGATTCTGCTAAAAGGAGCGAGTTGACTTTCG
AAAATGGACTGTTTCCTAAGATACAGTAGACTCTAGCTTATTCGAACATT
CTTATAAGGTATTATAATTCCGAACTTAAGTATTTCAAGTCCACTTTCGA
AAGTCAACTTTTGGCAGATTCATATTCATAAATATTCTAAATATACTTTC
TATTATTCGAATCTCTCTGTAATTCGAACAAATAAGATTCCCTGTTTGAG
TTCGAATTAGCGAGAGTCAATTGTATTACAAATTTTAAGTTATAAACTTT
TACTTCCCTTTCCTGAAAATAAACGGAGCATTTTGATTACATTACAAAGT
CAAAACTAAATAGCAGCGTCTTAGGAACCTAGTACCTACATAATTTTACA
TATTTTTTTTGCAGGTTTCATGTCAACCAATCAATGAGCTGGATTATGAT
GGTATTATCACGTGACTGGACTAAAGTTGAAACCGTTGATTGGAGACGAT
TGCTTTCAAATCGCTATAAATAGTTAATACTGAATCGAGGAAAAACAATC
AGTCGAGTTCATCGATGCAAATGGTTATTCTTGGTACGAAAAAGACTCTT
CAGAAATTAGGAAAATTTTCATTAAATGATACGAAAAAAAAGGATAAAGA
TGTATTCTTTCTTATGATATGGATATGCTGACAGAGCACAACTAACATTA
AAATTTCCGAAAATTTATTATTACCGCAATATCCTGAAGTTTTCATACGA
TAGGATAAACAAGAAATTTTTCGGTCAAGAATGTTGAATTTCGTGACATT
ATTAGAAGCACTCTCCCAGCTGACACGCAACGTTGTTTCAACGTTTATCT
AACGTTATATGGACGTTGTGAATATCAGAAAACGTTGAAACGATGTTGTG
TGCCAGCTGGGC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00028284-exon-sc0000672-1575043694:167679..167719 | TCONS_00028284-exon-sc0000672-1575043694:167679..167719 | Clytia hemisphaerica | exon |
| TCONS_00028284-exon-sc0000672-1575043694:166708..167205 | TCONS_00028284-exon-sc0000672-1575043694:166708..167205 | Clytia hemisphaerica | exon |
| TCONS_00028284-exon-sc0000672-1510915933:167679..167719 | TCONS_00028284-exon-sc0000672-1510915933:167679..167719 | Clytia hemisphaerica | exon |
| TCONS_00028284-exon-sc0000672-1510915933:166708..167205 | TCONS_00028284-exon-sc0000672-1510915933:166708..167205 | Clytia hemisphaerica | exon |
| TCONS_00028284-exon-sc0000672-1491911889:167679..167719 | TCONS_00028284-exon-sc0000672-1491911889:167679..167719 | Clytia hemisphaerica | exon |
| TCONS_00028284-exon-sc0000672-1491911889:166708..167205 | TCONS_00028284-exon-sc0000672-1491911889:166708..167205 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000672 | supercontig | sc0000672:166708..167719 - |
Blast
The following BLAST results are available for this feature:
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