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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00028134 ID=TCONS_00028134|Name=TCONS_00028134|organism=Clytia hemisphaerica|type=transcript|length=267bp
GTTTTTAGGGTTCATCtgtttttatggatttttagattCAATCTTATGTT
CATTGTTAAGTATAACTTGTTTCTTCTTTATTCATAGCTATTTATGTTTC
TCAAGACATCAGATTGATGTTACAAACCAATTTTAAAATGAGATTAGAAT
ACAATGATTATTTTCTACCAAAATGTCATCCGTGGTTATGTAAATGTTTT
GGTTGCCTCGTACTATGATTATTGTCAATGTTTAATGGCTGATTTTGGGA
ACATTCAAAGTGGTATT Run BLAST on NCBI transcript from alignment at sc0000665:129694..131897+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00028134 ID=TCONS_00028134|Name=TCONS_00028134|organism=Clytia hemisphaerica|type=transcript|length=2204bp|location=Sequence derived from alignment at sc0000665:129694..131897+ (Clytia hemisphaerica)
GTTTTTAGGGTTCATCtgtttttatggatttttagattCAATCTTATGTT
CATTGTTAAGTATAACTTGTTTCTTCTTTATTCATAGCTATTTATGTTTC
TCAAGACATCAGATTGATGTTACAAACCAATTTTAAAATGAGATTAGAAT
ACAATGATTATTTTCTACCAAAATGTCATCCGTGGTTATGTAAATGTTTT
GGTAAGCATCTTTCCAAAATATAATTTCATACTCTTGTTCCAACCAAAAC
TTTTGGTGAAACCCTGGGGTGTGATTATTGTGTctattaatttcaaattt
tggtaactttgtttttatcagacaTTGCAGATAAcgtgatttcatttttt
cagttatcCATTTTTCAGCATGCGCGTCGGTCAAAAATCAACCTTGTAGT
ATAAAAAGGATTTAACATTTTCATGTATTTACATTTTATTGATTGGATTT
TATAGAAATTGTCTGTTACCCCTGTTGAAGTTATCCATTTTTGAGCTCCA
CCAGCCTTAAAAATAAAGATCCCCTGATGGATATCCACTTACTCTGCTCT
agacccctggatatccaagcatTCTGTCTTGACTCCCTGGATATTTTTTG
CATTATACTCTAAGCCAACTTGATATCCTTAAAAAGTTCTCTTAAATACC
CATTAACTCTTTTGAATAGTACAAAAGAATACCAGTATCATTTTCCTGCT
AAGCAACAAAAACTATCAGTCTCATCTCCCTCCTAATGTGCATAAAATAA
TTAGTCCTCTCATTCTCCTTCGAAAATACAAGGAATACCATGGGCATCTC
TTTAAATTACAAAGAATGTCattaaaaatgcataaaataccaatttcatt
ttccttccAAAATGTACAAAGAATACCAGTCtcctttttccttaaaaaat
acaaagaattccagtttcattttccttcaaaaatacaaagaatatcaGTC
TCATCCTCCTTCAAAAACTCGaagatttttccttaaaaactacaaaaatc
aATCAATCTTGTAGTACAAAAACACACTTTTTATGTATTTATATGTTCTA
AAAAtgaatacaccgtttagtagtGTCAACTGCGCATGCGTCCAAAccat
tttccattgttttgacttTAGCGACCGCTCTTTCCCGTAAAAAAACGTTA
GGTAAAATTCCGGTTCTCGTAAGGAAACctagcagagaaatggtaggtaa
agaactccttttaatcataacttctttccCTCtcgatgaatttttgtgaa
attttcaggagacatccataaaattattatttatatcatttttaaatatc
taaatcattctctttgaaggaaataaataaattgacaatgtttacattcc
tctatcCGTCCACAGTACTAAAaggcgcatttttacctaccgtttttagG
GTGGAACACGGTAGAGATAGCGAGACTCCTTAACGGTGTATTGTTAGAAA
TTCTAAACAATAGCCCTTAGTGTAATATcataatatcaggggtggtcaaa
gcaattttttcacaaaatgtgCTAGAATGCTAAAAAGCAATCCCAGGCCT
TACCCGCCCGAAACTTCGAATTTctcataaaaatatttaattcaTGCTCA
AGTATTAAAAGTTTCTTTCTGATCCCCAGTGAAATATTTGAATTCATAAA
AAATTCGattcgaaaattaaaaaaaaaatcactgaaAGTATCTTACTGTA
CTATTTCAAGTTCCAACTACAAGCTGAAATTGACAAAGATACGTAAGCGT
CCTATGTACCATTCTAACAATGTACAGTACTATGTTTAATTTTGATAGGG
TTAACCACACAGACCCActcactgggaccccagccccactggaaaattta
ccCTAAAtggtggaaaaataccctaaaattcagccccactgggaaattga
ctctGGTTTCATCCCTACTTGAAGTTCAATGTAACAAATTACAATCGAAA
ACCATCTCCACTGGAATCTTTGAGCTgagaaacaatagaatttcaatccc
cattaggattttgatagaaattttcatccccactgataACAAAcctttca
ccggggctgtgagacaggggtgtcgcACATCTTATTGCTTTTTATGTTTT
GCTTTACTTTACtcctatatatttttttctttcatcagGTTGCCTCGTAC
TATGATTATTGTCAATGTTTAATGGCTGATTTTGGGAACATTCAAAGTGG
TATT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00028134-exon-sc0000665-1491911889:129694..129894 | TCONS_00028134-exon-sc0000665-1491911889:129694..129894 | Clytia hemisphaerica | exon |
| TCONS_00028134-exon-sc0000665-1510915933:129694..129894 | TCONS_00028134-exon-sc0000665-1510915933:129694..129894 | Clytia hemisphaerica | exon |
| TCONS_00028134-exon-sc0000665-1575043694:129694..129894 | TCONS_00028134-exon-sc0000665-1575043694:129694..129894 | Clytia hemisphaerica | exon |
| TCONS_00028134-exon-sc0000665-1491911889:131832..131897 | TCONS_00028134-exon-sc0000665-1491911889:131832..131897 | Clytia hemisphaerica | exon |
| TCONS_00028134-exon-sc0000665-1510915933:131832..131897 | TCONS_00028134-exon-sc0000665-1510915933:131832..131897 | Clytia hemisphaerica | exon |
| TCONS_00028134-exon-sc0000665-1575043694:131832..131897 | TCONS_00028134-exon-sc0000665-1575043694:131832..131897 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000665 | supercontig | sc0000665:129694..131897 + |
Blast
The following BLAST results are available for this feature:
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