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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00028114 ID=TCONS_00028114|Name=TCONS_00028114|organism=Clytia hemisphaerica|type=transcript|length=1553bp
GGCAGCCGAAATATACTATTTCATAGCCGCCTCGGTGCGGTGGCGGGATG
TACTTCATTCGACTTGGAATTAACCTGAGCTAAGGTTTAGCtccaaataa
aatttgaataaatatttttcaagttgacggtAGGGTGTATTTTGAATAAC
AGAAGGGACAAATTATCAGTTGATGTGTAAATTATTTTGTaatatgtctt
ttttttatatttaacttctttttaacaatggaatatcttttttggGTATA
GTAGAAGGAAGCTAATCAAAGGGTCTAACAAATCTACCAAAACTATGATT
ACTAAATTGTAAATACTATCATAAATTACCAACTAAATGATAAAAGCGTA
ACGGATGAGGGACACTTTTCTGCTtatatttcatcaaatttcattgaAGT
GTTTCAAACCTTTTCAGCTCGAGacacattgcaatgtcttcaaataCCTT
AGTtttgaaaacagaaaaaacaaaaaagtctcagaatttttattatatta
gcatttataaaaaaatgcagtAACGAAAGGGACATTCGTTACGGAAGGGA
CAACAAGATTCACTTCACAGTATCTCCATTGGAGACAAATTCTAATTCAG
AAATGCTTTTGTGAAAATAAGTAGTCCTATGGGTATAGAAACTATATACA
CCAAAGGAAAATGATTCTTGCGAATCAGTTGactaaatatttcaaattat
acaTGCGTAACGGAAGGGCCAAATTTGGTGACCATCTTCCATGTCAggca
caatttttgaaaaaactgagcttagaaattagatgagagcATGAAAATGG
AATCTAGGAACATCCCAATGATAAATTGACAAGAAGAGGCCCAAAAAGTA
AACTTGACTAGGTAATAAGTTTAAAAACGTAACGAAAGGGACAGTGTACC
AAAAATTTGGCCTTTACCCACATATCATTTTAAGTTtacaagttttaatt
aattgtctaaggaacttgaacttgattcaggtaactcatccttgttgttg
gaaaatacatcctgtagatgacagATGTTGTTTTTCTGAAAGCATGATTT
TATAGTGTGATTAACTGTAACTCCActaagtttatcaatcatactttctg
tcataacatgtcacgataacttttactgatagcgcgccctttttaacttt
tttgttttgccaCTTATTTGGTCTTTCTCGTTCAAGACACTTgggtgtgt
tccactacggatttttttcatattgctatttaaaagcctacttggtgaga
aacagaaattgtgtattttttaatacaccgttcattaactcaaatcaaat
gccTTTGGAGGTTTGATGAAATGGTGGCTGTGTattgccatcccatgttt
tgtcagatagtcccaagttagagtagTTGACGGTAAATTGTTAAATGTTC
CCACATTTCAGGCATTTAACCCAGTGTTTTTTAACATATCAAAATTAGGA
AATCCCATTCTGTGCCATGTTGTGCAATCAATgcttaccgtattacttcg
aataaacgcccggggcgtttattaaatcttttcgattttaggaggggcgt
tta Run BLAST on NCBI transcript from alignment at sc0000664:37339..38891 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00028114 ID=TCONS_00028114|Name=TCONS_00028114|organism=Clytia hemisphaerica|type=transcript|length=1553bp|location=Sequence derived from alignment at sc0000664:37339..38891 (Clytia hemisphaerica)
taaacgcccctcctaaaatcgaaaagatttaataaacgccccgggcgttt
attcgaagtaatacggtaagcATTGATTGCACAACATGGCACAGAATGGG
ATTTCCTAATTTTGATATGTTAAAAAACACTGGGTTAAATGCCTGAAATG
TGGGAACATTTAACAATTTACCGTCAActactctaacttgggactatctg
acaaaacatgggatggcaatACACAGCCACCATTTCATCAAACCTCCAAA
ggcatttgatttgagttaatgaacggtgtattaaaaaatacacaatttct
gtttctcaccaagtaggcttttaaatagcaatatgaaaaaaatccgtagt
ggaacacacccAAGTGTCTTGAACGAGAAAGACCAAATAAGtggcaaaac
aaaaaagttaaaaagggcgcgctatcagtaaaagttatcgtgacatgtta
tgacagaaagtatgattgataaacttagTGGAGTTACAGTTAATCACACT
ATAAAATCATGCTTTCAGAAAAACAACATctgtcatctacaggatgtatt
ttccaacaacaaggatgagttacctgaatcaagttcaagttccttagaca
attaattaaaacttgtaAACTTAAAATGATATGTGGGTAAAGGCCAAATT
TTTGGTACACTGTCCCTTTCGTTACGTTTTTAAACTTATTACCTAGTCAA
GTTTACTTTTTGGGCCTCTTCTTGTCAATTTATCATTGGGATGTTCCTAG
ATTCCATTTTCATgctctcatctaatttctaagctcagttttttcaaaaa
ttgtgccTGACATGGAAGATGGTCACCAAATTTGGCCCTTCCGTTACGCA
tgtataatttgaaatatttagtCAACTGATTCGCAAGAATCATTTTCCTT
TGGTGTATATAGTTTCTATACCCATAGGACTACTTATTTTCACAAAAGCA
TTTCTGAATTAGAATTTGTCTCCAATGGAGATACTGTGAAGTGAATCTTG
TTGTCCCTTCCGTAACGAATGTCCCTTTCGTTactgcatttttttataaa
tgctaatataataaaaattctgagacttttttgttttttctgttttcaaa
ACTAAGGtatttgaagacattgcaatgtgtCTCGAGCTGAAAAGGTTTGA
AACACTtcaatgaaatttgatgaaatataAGCAGAAAAGTGTCCCTCATC
CGTTACGCTTTTATCATTTAGTTGGTAATTTATGATAGTATTTACAATTT
AGTAATCATAGTTTTGGTAGATTTGTTAGACCCTTTGATTAGCTTCCTTC
TACTATACccaaaaaagatattccattgttaaaaagaagttaaatataaa
aaaaagacatattACAAAATAATTTACACATCAACTGATAATTTGTCCCT
TCTGTTATTCAAAATACACCCTaccgtcaacttgaaaaatatttattcaa
attttatttggaGCTAAACCTTAGCTCAGGTTAATTCCAAGTCGAATGAA
GTACATCCCGCCACCGCACCGAGGCGGCTATGAAATAGTATATTTCGGCT
GCC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00028114-exon-sc0000664-1491911889:37339..38891 | TCONS_00028114-exon-sc0000664-1491911889:37339..38891 | Clytia hemisphaerica | exon |
| TCONS_00028114-exon-sc0000664-1510915933:37339..38891 | TCONS_00028114-exon-sc0000664-1510915933:37339..38891 | Clytia hemisphaerica | exon |
| TCONS_00028114-exon-sc0000664-1575043694:37339..38891 | TCONS_00028114-exon-sc0000664-1575043694:37339..38891 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000664 | supercontig | sc0000664:37339..38891 . |
Blast
The following BLAST results are available for this feature:
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