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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00028112 ID=TCONS_00028112|Name=TCONS_00028112|organism=Clytia hemisphaerica|type=transcript|length=2270bp
CGGTTAGAGATGGCCGAGCggatcaaaataaagaaaatggcGGCGTTCCA
AGCACGAAACATGCACTGAATAAAGACTTTgtatttttgctatgctattG
AAAAGGGATTTAGGCTTCAGGATAGGTATTGTAAAATactgactgatttt
tctattctaAAAGTACTGTACTTTGAgccattccagaatttttaaggcga
aagaagaaaatgtatgaatacAAAAGTATGCAATTGTTTGGAGTTTGGAT
ATTTGTTAAAACTAAAAGAAATATAATATCACAATGTCACAAACACCAAT
AAACCAGATGCAAGACAGGAAACCAGATATCAATATCTTAACACAACAAC
TTAAAACTGCCCAAAGTTTTGCCGGTCCAATTACTCCCACGGCTACAGTG
AAGGTTGAACCGAAGGAAGAGGAACAGATGCCAACAAGTGGAACCAATTT
ATCAGAATTTGTTAACCAGCTTGAAGATTATGTACCAACAGTGCCAGATG
CAGTCACTGTCAGTTATATGCAAAGAGCTGGTTTTGAGAATATTGATCCA
CGTATAGTAAGATTGATATCATTAGCATCTCAAAAGTTTGTATCAGACAT
TGCTCACGATGCGTTGCAACATTGTAAAATGCGTGGTCAAAGTGGACAGA
GCTCCCGTAAATCAGGAAAAGATAAGAGATATACTTTATCAATGGATGat
ttgagccctgcattgaatgAATACGGAGTACATGTTAAAAAACCTCCATA
TTTTACATAATTATCTGCAAAAGCTTTTTACCTACCTAATTTCACTATCA
CTGTCAGTTGAGATATGGGAACAATcatcattgggctcttccagaaattA
TCCGttgtgaaaaatctacaaaatgtgCCTTGTCTAGGGGGTaatgtttg
agggtaattttgattgtctgtgggatcaactgatgcttgtctgggggtta
gacctgctgtccagGGGTTCAAAAGTCTCAATGTCACAATGgtagatttc
caaaaaatgttatatcctccattaaaactttttctggaaaagcccattat
caAATCAGACTATTAGGAAGGTTATCAGAAGTAACTTGtattataattat
ctttttaattgttttatatttatatatctTTGTctgaataatataaaata
acCATAAAGGTTGTTCACAATCATTGATTTTGCAAGTGAAACAAAACATA
GTTACTAAGGCTAGTGGACAAAATTCTCATAGTTTTCGACCCAAGACTCA
GAAATTATGTATTCCCCCCCCTCTCTGTCTCTTCATCTCATCTATCTTTA
GATAATGATTTTTAAAGATAATTTGAAGATTATTAAGtgaatattttgaa
ttattggggaaagattttataaaagaccttcatttcgtttttttttataa
tttcaatttcacccAAATTCTAGTTTCATACTTTCCagtgcatttttttt
ttctctgagaTGTTTTTTAGTAAAATCAAGCATATAGTTACATCACCAAC
GATCCATAAGATGAGCAAAGCATCaacattttcaatcaaatccaTTGATC
ATGTGGTTTTAACTGTCCAAAGCATTGACAAaactatcaaattttatgaa
gattGTCTTAACATGAAAGTGGAAACTTTTGGTAATGGTAGAAAAGCTTT
GAAATTTGgaaattcgaaattcaatttacATGAATATGGAAACGAGTTTG
AACCAAAAGCCAAAACACCACAACCAGGCTCAGTAGATATATGTTTGATT
GCGGAAGAAAAGTTACCAGTAATCATTGAACATCTTAAGGAACGTAATGT
TGTTATTGAGGAAGGGATTGTTCCTCGGACTGGTGCTTGTGGACCAATTC
AATCAATTTATATTCGAGATCCAGatgaaaatttaattgaaatctcaaat
tattaaaattctggtttttctattttatatcTTGATCAGGAAAAGCTGAA
AGACTAAAGCATATTATATAAATAATGTCACTGGGAAATAAGACAGCTTT
GTTCATTATCATTTTGTTGGTTTTATGTTaaagttggttgattttggGGT
TGATTATACAGTATAAGtggtttttttaatttataaataagaatcaaaaa
agttttctaacaatgttttttgattgaaatcatATTTTTGATAGTATTTG
ATACTCCTTAATAGTTTCAATGAATTATACATCGTTTTTATAATCCTTAT
ATTTTATTTGTATTATAAttcattatttgaaaatatgaaaagaataaaat
acTTCATTCTTAAAATACTG Run BLAST on NCBI protein sequence of TCONS_00028112-protein >TCONS_00028112-protein ID=TCONS_00028112-protein|Name=TCONS_00028112-protein|organism=Clytia hemisphaerica|type=polypeptide|length=158bp
MSQTPINQMQDRKPDINILTQQLKTAQSFAGPITPTATVKVEPKEEEQMP
TSGTNLSEFVNQLEDYVPTVPDAVTVSYMQRAGFENIDPRIVRLISLASQ
KFVSDIAHDALQHCKMRGQSGQSSRKSGKDKRYTLSMDDLSPALNEYGVH
VKKPPYFT Run BLAST on NCBI transcript from alignment at sc0000664:33994..47753- Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00028112 ID=TCONS_00028112|Name=TCONS_00028112|organism=Clytia hemisphaerica|type=transcript|length=13760bp|location=Sequence derived from alignment at sc0000664:33994..47753- (Clytia hemisphaerica)
CGGTTAGAGATGGCCGAGCGGATCAAAATAAAGAAAATGGCGGCGTTCCA
AGCACGAAACATGCACTGAATAAAGACTTTGTATTTTTGCTATGCTATTG
AAAAGGGATTTAGGCTTCAGGATAGGTATTGTAAAATACTGACTGATTTT
TCTATTCTAAAAGTACTGTACTTTGAGCCATTCCAGAATTTTTAAGGCGA
AAGAAGAAAATGTATGAATACAAAAGTATGCAATTGTTTGGAGTTTGGAT
ATTTGTTAAAACTAAAAGGTAGAAAACTTTATTGGATTTTTGAAAGATAT
TTTACCTTAAAAGGGAACTAATTTTTGCAAGAACTAAAATTTCTTCAGAA
GTGAAGTTGGAGCTAATTTTTGCCTTGCCCTTGCAGCCTTGGCAAGTGTA
TTATACCATGTTAAAAAGTTCTTCCCTCTTAACTTACTTAGAAGGATTTC
TATATGAAGAGGCTCAGAATTCTACATCTTTTACCAAAAATTGAAGACAC
AGTAATGTGCTTGATTCGAAGAATATACGTAAATTCCATTTTCTGTTAGG
ACCCCCGGTGACGTCAAGATTTTTCTGGGTGCGTCTGGACCGGGGTGGAA
AAAATAAATAGATAGTCAAAAACGCCCGGATACCACCCGCACTCCGCTCA
GACGCATCCGGGCAATCTCCGGGCGGTAAAAATTTAAAGGTTGAAAACGC
CCCTTTTCTGCCTACACGCACACACACCCAGACGTAATTAATCTAACAGT
TCGATTACCGAACTAATCGAACTTTGTCGAACTTAATCGAACGACGAAAG
TTCGATTAAATTCTTTAATCGAACTTTTCAAAAGTTGCTAAAATTGTGAG
TATTCGATTAAGTTCGACAAAACATATAGACCTTTTTTCAAAGGGGCAAC
CCTGTTGAATAATTATGTAGTCCAGCCATACAAACAATGATACAGCAATG
CATAATTACTGTTTCATGCATATTGTAATATTTATGCATGGGTGTATCAT
TGTTTTTCTGCTGGACTACATAATTATTCAACAGGGTGGCCTCTTTGAAA
AAAGGTCTATTAAGTTCGACAAAGTTCGACAACAAGAAAGGTTCGACAAA
TTTGACAAAAAACTCCGTTCGATAAAGTTTGACAACAAAAAATGACCTCC
TTTGGGTACTACCGTGGACGGCCCCTGGGGGTCCCGGCCAAGGTCTGGAG
GGGTCCAATTGGTGCCCTACTGGTCAGGGGGATGTGAGGGTACACGTCTG
CACCGTTGGGGGTCCTTCAAAGTTCCTCAAAGTGTTGTCAAAAGCTGGCA
AAAATTACGAAAAATGACCTCCTTTAGGTACCGGCCCCGGTGGGACCAAT
CGAGGCCTCTACAGCCCCCCACAGCCCTCCGGACCGCTTTGGATACCCTC
TGCCTTCCTTTCCCTCAAAGCCAGCACCCTCCATCAGTCATCCGAAGCCT
ATAAAAGGCTTGGAAAGGCGGAAAGGTTTGAAAATTGGTCAAAATTTGAA
AAAAATGACCTCCTTTGGGTACCACTGCAGACGTGTGCCAGGGGGTCGGA
TCGGTGCTCACTGGTCAGGGGGATGTGAGAGTACACGCTGTTCCTCAAAG
TGCCGTCAAAAGCCGGCGAAAATTGCCGAAAACGACCTCCTCAATTGAGA
ATGTTACACCCCTTTCTCACCAGCAAAATTCGCCCGTAGGACCGATTGAG
GCCTCTGCATCCCTCCACAGCCCCCCGTATCCCTTCGGACCCCTTCGGAT
ACCCTCAGCCTTGCTCTCCCTCAATGCCAGCACCCTCCATCAGTGCTCCG
AAGCCTTTAAAAGGCTCAGAAATGCTTGAAAATTGGCAAAAATCGGTCAA
AATTTGAAAAAATGACTTCCTTCGGGTACCACCGTGGAACGCTTTTGGGG
GTCCCGACAGGGATTTCCGGGAGTTCGATGGTTAGGGGGGATGTAAAGGT
ACTCCCCTGAACCGGTTGGGGTGCTTCAAAGTTCCTCAAAGTGTCGTCAA
AAGCCGGCAAACATTGGAAAATTGGGGAAAATTGGGAAAAATTGGGAAAA
ATGACCTCATCATTTGGGTACCACCGTGGACGGCCCCTGGGGGTCCCGGC
CGGGGTTCCGGGAGGTTTGATCGGTGCCCACTGGTCAGGGGGATGTGAGG
GTACACGCCTGCACCAGCGGGAGTGCTTCAAAGTTGCTTAAAGTGTCGTC
AAAGGCCGGCAAAAAGTGCAATCAAATTACGCGCAAGTGGAGCGGCCTTC
AGTTGCTCGGGTTTTCTCAAATTTTTGTTTGATTAAACTTGACAAAGTTC
GATTACACTAGTTCGATTAAGTTCGAATAATGTAATCGAACTAATCGAAC
TGTCGAGGTCTCTTTAAAAAAAGTTCGATTAAGTTCGATTTCAGTAATCG
AAATTAATCGAACTTTGTATTTTGAGAAATTTGTGAGTATTCGATTAAAT
TTCAACAACCAAACTTAGTCGAACATCAATCGGCCAACAAAGTTCGATTA
AGTTCGACAAAGTTCGATTAAAAATACGGTTCGATTGGTTCGATTAATTA
CGTCTGGACACACACACTGCTCCCGGGTGCCGGGTGGAAACCAGGCGCTC
AACATTGAATAAGATTAAAGACCTGTGCAGTATGCTAACTTTGTATCAAG
ACAATTATAGTTATGATTTTGATTAAAGTTGTAAATTTATTGTATCTTTT
TTTCAATTTTTTCAATTTTTTGATGTTTTTGAGCTTTATATATTTAATAA
AATAAAGCCAGATTTTTTCGAAGATATTTTGGTCCTGACATTACACACAA
GGGAGTGTTTATCCAGTGCGTGATTTCCTCTTGGAATCATTCTTGGAATC
CCTCGAAAAACACACAAAAAAGTTATGCAGCTAGAGTTCACTTAACGACT
TAACAATGTCCACTTCTCCAGTAAATAAATTTCTTTAGAAAAACTGATTT
TAAGTTATTTTAGATGACTTTTTATCTGAATTAGGACCGAGATCGTAAAA
AAGGCTTAATGAAAAATGCCGCCCGGACGCACATCCCGGCGGTTTAGATA
AAATCCGCTCGGATGACGCCCAGAAAAGTCCTTTTCCGTTTCATACAAAA
AATCTTACTTTGACCACTGTATATAAAACTGGTGTTTTTTTTGCGGAACT
AATTTTTGCAGTTGACACTCAGCTTTTGCTCAAAATCTTCATTTTCTTTT
TTGATGAATTATTTTTGCTATACACACTCAAAAATACAAATTAGTTCAGA
TTAGTTACTGCAAAAATTAGTTACTGGAAAATTAGTTCCCTTATAGTATA
CATTGTATTTTGTAGTAAAGAGAGATTTTAGAGTATCTAAATATAAAATA
AGTGAGATTACAAAGCGTTACTATCAACTGCTCTAACTTGGGATGTTGGG
ACGATTGGTCGAAACATGGTACTGTTAATATTCTTTCCTGTATTTTTACT
TAAATCTCTTTGACAACAAATTTGTTTTGGTAACTCAGTTAAGTCACACT
AGCGTCCCGTCGAAATGCATACAGTATCAAAGATTAATGCTATGAAAGCA
CTGTAGTGATTCATGAAAAAATAACCTGGCGCTTTTTAATGAAATTAACA
TTTCCAAAAACAATGAGAAATTGCCTAAAATTTGAGCCATAGATGAAAAA
ATTTGAGCCAAGCAAAACTTGAAAACTAAATTTGAAGATCAACTACCCAA
GAAAAAGATCTACGAGGGAGACGGAACCTACCTAGATCCGCGCACCGTCA
GATAGACTATTTCCTGGAAATTTTTGCCGGACCTCAAACACTGACCCATT
TACATGTAGGGAATTACTTTACTTTAGCGTATAAACAAGGCTTTAAAAAA
TCGAAGCGCTGTCAGGAATTGAATGACAAAATTTGGTTGGTTGATACACA
TGGGTAAAGGCCACATTTTTGGTACACCTGTCCCTTCCGTTACACTAAAA
AATATTTATCCTCAAAAAGCTTCTAAACTTATTTATTTGTATTAAGTAAT
GGTTCTACCATGATAATCAATTGCGTGCCCCTCAATAACATTGTTTTATA
AAAGGTTTGTAGCTCTAATTGCCAACCGGTCAAGTTTTTAAACCCTTATC
AATAAACCAATGGAGACTAGGTGTTTCTCCCTATATATTGCAATTTCAAG
AAAATTTTCAAAAAATGCTTAACTTCAGAGATGTTGAATCAATCCCACTG
TTAATTCCCACGTCTCAGATGCAATTAAAGTATAAGGCCCTAGGAATAAA
AACACAAAAAAGGCAGACTAAGGAGGCAAGGTGAGAAGTTTTTGAAAGTG
GTCGAAATACACTGATCTAGGTACCAAAGGATATGAGCAACAGAGGAAAT
GTATAGAGACATAAGTGTGCAGTAATGGAAACAGTATATTTCGAAACGTA
AACAAGAATGCCGAAAATGTATAATAGAACTTGGGATGACATTGGGGATG
CATCAAGATATATATATAACTGAGAGCCTAACCCGTTTTGACGACGGGTG
TCCTGTGTAACCCGTATTTATATATGACGGGGGTCTTACTTAGCCTGTTT
TGATGACAGGTGTCGCCTAGCCCCGTTTTGATGACGGAGGTTGATAAGCC
CCGTTTTGATGACGGAGGTTGATAAGCCCCGTTTTGATGACGGAGGTTGA
TAAGCCCCGTTTTGATGACGGAGGTTGATAAGCCCCGTTTTGATGACGGA
GGTTGATAAGCCCCGTTTTGATGACGGAGGTTGATAAGCCCCGTTTTGAT
GACGGAGGTTGATAAGCCCCGTTTTGATGACGGAGGTTGATAAGCCCCGT
TTTGATGACGGAGGTTGATAAGCCCCGTTTTGATGACGGAGGTTGATAAG
CCCCGTTTTGATGACGGAGGTTGATAAGCCCCGTTTTGATGACGGAGGTT
GATAAGCCCCGTTTTGATGACGGAGGTTGATAAGCCCCGTTTTGATGACG
GAGGTTGATAAGCCCCGTTTTGATGACGGAGGTTGATAAGCCCCGTTTTG
ATGACGGAGGTTGATAAGCCCCGTTTTGATGACGGAGGTTGATAAGCCCC
GTTTTGATGACGGAGGTTGATAAGCCCCGTTTTGATGACGGAGGTTGATA
AGCCCCGTTTTGATGACGGAGGTTGATAAGCCCCGTTTTGATGACGGAGG
TTGATAAGCCCCGTTTTGATGACGGAGGTTGATAAGCCCCGTTTTGATGA
CGGAGGTTGATAAGCCCCGTTTTGATGACGGAGGTTGATAAGCCCCGTTT
TGATGACGGAGGTTGATAAGCCCCGTTTTGATGACGGAGGTTGATAAGCC
CCGTTTTGATGACGGAGGTTGATAAGCCCCGTTTTGATGACGGAGGTTGA
TAAGCCCCGTTTTGATGACGGAGGTTGATAAGCCCCGTTTTGATGACGGA
GGTTGATAAGCCCCGTTTTGATGACGGAGGTTGATAAGCCCCGTTTTGAT
GACGGAGGTTGATAAGCCCCGTTTTGATGACGGAGGTTGATAAGCCCCGT
TTTGATGACGGAGGTTGATAAGCCCCGTTTTGATGACGGAGGTTGATAAG
CCCCGTTTTGATGACGGAGGTTGATAAGCCCCGTTTTGATGACGGAGGTT
GATAAGCCCCGTTTTGATGACGGAGGTTGATAAGCCCCGTTTTGATGACG
GAGGTTGATAAGCCCCGTTTTGATGACGGAGGTTGATAAGCCCCGTTTTG
ATGACGGAGGTTGATAAGCCCCGTTTTGATGACGGAGGTTGATAAGCCCC
GTTTTGATGACGGAGGTTGATAAGCCCCGTTTTGATGACGGAGACTTATA
CGCCCCGTATAAGACGGAGGCTAAAAAATAAACAGGGAGGTTGCCCTGGC
GAACCTTAACACCGTTGGGACTACAGTGTGCGAACCTAATCCAGATCTAA
CTGGATCCTTGACCGTAGGGGATTAATCTAAGTAACTGACTACTGACATG
CAACGGTTACGGAGTAACCCTACACCCCAACGTCACCCAAATCCAAAGAA
TAACATTAAAAGGAGGGTAAAGAGATTAATCTGAGGAAATTCTAGACACA
TAATGACATTAGGTAGGTTGCAAATAGTGATGTAAAATTTTACCTTGGCC
AAGTTAGAATTAAACTTAGAAATATGTTGGTCAGAGATTTGAGATACCTA
AGATAGCAATCCCTAGACTGTCTACCCATAATGTGTATCATTGAGTCAGA
CACACATGCGGAGAGGGCAGCGGAGGCTCCACCCATGCAAAAACTTAGGG
TATTTANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGTGGAAAATTGA
AGAACTAAATTTGAGTTTTAAGAGAGCTTTAAAAGATCTGAATTTAAGCT
GTTGATTCGAGATCTGTACAATGTGATTCAAGTCTCTTGCAGATATGTGA
CATGAAACGGAAATAAGACATCCTAATTAAGATTTGGTTTGTAGTGAATG
TACGCTGCAAACTAAACTTAGAGATTACGAACGGTTCAAAACATATCATC
TGTTAGCCATTAACTTATAATATTTTCATAAATGTCTTGAACTTGGTCCT
TTGATTATTCAAAAGTATCCATGCTCGAGAAATCTATTGAAATTCATTAC
TGTCATTGTCTTAGCCACTGACTCTATCAAGTTGAAACAATAATCATTGT
TGAGCTACTCAGGAGCCACAAGCTTTTAATACAAATTCTGCAAGTATTTG
TCTCGAAAGCACAGCACTAAAATTTCAAAGTACTCCATACCATTACAGTT
AGGTTGTGATTCCATTTAAGATACTGGATGACTAAGTCATTTTGTGAAGC
CCTTTTCTCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNCCGGCAGCCGAAATATACTATTTCATAGCCGCCTCGGTGC
GGTGGCGGGATGTACTTCATTCGACTTGGAATTAACCTGAGCTAAGGTTT
AGCTCCAAATAAAATTTGAATAAATATTTTTCAAGTTGACGGTAGGGTGT
ATTTTGAATAACAGAAGGGACAAATTATCAGTTGATGTGTAAATTATTTT
GTAATATGTCTTTTTTTTATATTTAACTTCTTTTTAACAATGGAATATCT
TTTTTGGGTATAGTAGAAGGAAGCTAATCAAAGGGTCTAACAAATCTACC
AAAACTATGATTACTAAATTGTAAATACTATCATAAATTACCAACTAAAT
GATAAAAGCGTAACGGATGAGGGACACTTTTCTGCTTATATTTCATCAAA
TTTCATTGAAGTGTTTCAAACCTTTTCAGCTCGAGACACATTGCAATGTC
TTCAAATACCTTAGTTTTGAAAACAGAAAAAACAAAAAAGTCTCAGAATT
TTTATTATATTAGCATTTATAAAAAAATGCAGTAACGAAAGGGACATTCG
TTACGGAAGGGACAACAAGATTCACTTCACAGTATCTCCATTGGAGACAA
ATTCTAATTCAGAAATGCTTTTGTGAAAATAAGTAGTCCTATGGGTATAG
AAACTATATACACCAAAGGAAAATGATTCTTGCGAATCAGTTGACTAAAT
ATTTCAAATTATACATGCGTAACGGAAGGGCCAAATTTGGTGACCATCTT
CCATGTCAGGCACAATTTTTGAAAAAACTGAGCTTAGAAATTAGATGAGA
GCATGAAAATGGAATCTAGGAACATCCCAATGATAAATTGACAAGAAGAG
GCCCAAAAAGTAAACTTGACTAGGTAATAAGTTTAAAAACGTAACGAAAG
GGACAGTGTACCAAAAATTTGGCCTTTACCCACATATCATTTTAAGTTTA
CAAGTTTTAATTAATTGTCTAAGGAACTTGAACTTGATTCAGGTAACTCA
TCCTTGTTGTTGGAAAATACATCCTGTAGATGACAGATGTTGTTTTTCTG
AAAGCATGATTTTATAGTGTGATTAACTGTAACTCCACTAAGTTTATCAA
TCATACTTTCTGTCATAACATGTCACGATAACTTTTACTGATAGCGCGCC
CTTTTTAACTTTTTTGTTTTGCCACTTATTTGGTCTTTCTCGTTCAAGAC
ACTTGGGTGTGTTCCACTACGGATTTTTTTCATATTGCTATTTAAAAGCC
TACTTGGTGAGAAACAGAAATTGTGTATTTTTTAATACACCGTTCATTAA
CTCAAATCAAATGCCTTTGGAGGTTTGATGAAATGGTGGCTGTGTATTGC
CATCCCATGTTTTGTCAGATAGTCCCAAGTTAGAGTAGTTGACGGTAAAT
TGTTAAATGTTCCCACATTTCAGGCATTTAACCCAGTGTTTTTTAACATA
TCAAAATTAGGAAATCCCATTCTGTGCCATGTTGTGCAATCAATGCTTAC
CGTATTACTTCGAATAAACGCCCGGGGCGTTTATTAAATCTTTTCGATTT
TAGGAGGGGCGTTTAAAAGAAGGGGCGTTTATTAAATTATNTGTTTATTA
AATTTTTTCGATTTTAGGAGGGGCGTTTATTTGAGGGGGCGTTTAAAAGA
AGGGGCGTTTATTAAATTATTTTTAAAAAGTCAAATATTTAGAGCAATTA
TATCCTTTGGATTATAGGATTTTAGTTCAAAATTTCTTAGGCTCAACAGA
TAAAATTGCATCGAAAACTGCTCTGTCAGGTTACAAGAAATGACTAAAAT
CTTCCTTTTCAAACCCAATCAATACTGGTACTGAAGTATTAAAGTCACAA
GTTTTTAATAAACCCCCCTCCCCTAGAGGGGGCGTTTATTCGAAGGGGGT
GTTTATTTGAGGGGGGCGTTTATGAAATAATTTTCCTTTTAGGAGGGGCG
TTTATTCGAGGGGGCGTTTAAAAGAAGGGGGTGTTTATTATTATTATTAT
TATTATTATTGTTAATTTATTTGGTAAAAAAGGTCTCTAAGTTTTGTAAT
ATATACAATGCAGTAAAATACTGATGTGGACTTAGTAAAATTGTAAAATA
AAATATAAGATAGTTATGAAAATATAAATAAATGGATGATATTTATTGCA
TGATTCGAATAAAATAAGTAATTGTATAAATATGTTAAAATCAATTAGTA
TTAAAGTCTTTATAAAAAAGTATATAAAACCTGGATTTATTAGTTTAAGA
TTGTCCTGACTAGACCAGACACAGGAACAAGGGGATTGATTAATAAGTTG
GTATTAGGATAGAATTAATTTAGCAAAACTCGAGACACAACCTACAGAAC
TTGAATTTTAACAACTGCACCGAGGCAAAGAGAAATAAATAAATAATGTT
TATTCAAAGTAATACGGTAATTGTTTAATTTGATATGTCCATTTTTGTGT
GTTCTCTCAAAGTTTGTTTTTTTCAAAGTTTTTTCAAAACTCCATCAGCC
TTTTTCTCAAAAGTAAAACCTGGTAAAACACCTTCTTTTTTCTATTAAAA
ATGATTACAATTTTTTCTCTACTCACGTACTACCTTAAAGGGAACTGTTA
ATTTCCACTTTTTTTGCAATTTTTCAACAAAACCCTGAAATTTAGAAAAC
CCGCAAATTACAAAATTGGCCATTATGCAACCAAATTTTGAAAAATCCCT
AGCAAATAATGAAAAAGTGTTCCTGCGAAAAACAATTTTTTCGATTGTTT
TTATAATTCTTGGGAAATTAATCAGTTCTTGACTGGGGGTGCAAATTTTT
ATCAAACTATGCAAGCTTTTGTAAGCAGACAGTCTTGGTGATATGATACT
GGCTTCATAGTCAATAGCTATGTAAGAGCATATTAATATTTTCATAACAT
TTGATTAGAAATATAATATCACAATGTCACAAACACCAATAAACCAGATG
CAAGACAGGAAACCAGATATCAATATCTTAACACAACAACTTAAAACTGC
CCAAAGTTTTGCCGGTCCAATTACTCCCACGGCTACAGTGAAGGTTGAAC
CGAAGGAAGAGGAACAGATGCCAACAAGTGGAACCAATTTATCAGAATTT
GTTAACCAGCTTGAAGATTATGTACCAACAGTGCCAGATGCAGTCACTGT
CAGTTATATGCAAAGAGCTGGTTTTGAGAATATTGATCCACGTATAGTAA
GATTGATATCATTAGCATCTCAAAAGTTTGTATCAGACATTGCTCACGAT
GCGTTGCAACATTGTAAAATGCGTGGTCAAAGTGGACAGAGCTCCCGTAA
ATCAGGAAAAGATAAGAGATATACTTTATCAATGGATGATTTGAGCCCTG
CATTGAATGAATACGGAGTACATGTTAAAAAACCTCCATATTTTACATAA
TTATCTGCAAAAGCTTTTTACCTACCTAATTTCACTATCACTGTCAGTTG
AGATATGGGAACAATCATCATTGGGCTCTTCCAGAAATTATCCGTTGTGA
AAAATCTACAAAATGTGCCTTGTCTAGGGGGTAATGTTTGAGGGTAATTT
TGATTGTCTGTGGGATCAACTGATGCTTGTCTGGGGGTTAGACCTGCTGT
CCAGGGGTTCAAAAGTCTCAATGTCACAATGGTAGATTTCCAAAAAATGT
TATATCCTCCATTAAAACTTTTTCTGGAAAAGCCCATTATCAAATCAGAC
TATTAGGAAGGTTATCAGAAGTAACTTGTATTATAATTATCTTTTTAATT
GTTTTATATTTATATATCTTTGTCTGAATAATATAAAATAACCATAAAGG
TTGTTCACAATCATTGATTTTGCAAGTGAAACAAAACATAGTTACTAAGG
CTAGTGGACAAAATTCTCATAGTTTTCGACCCAAGACTCAGAAATTATGT
ATTCCCCCCCCTCTCTGTCTCTTCATCTCATCTATCTTTAGATAATGATT
TTTAAAGATAATTTGAAGATTATTAAGTGAATATTTTGAATTATTGGGGA
AAGATTTTATAAAAGACCTTCATTTCGTTTTTTTTTATAATTTCAATTTC
ACCCAAATTCTAGTTTCATACTTTCCAGTGCATTTTTTTTTTCTCTGAGA
TGTTTTTTAGTAAAATCAAGCATATAGTTACATCACCAACGATCCATAAG
ATGAGCAAAGCATCAACATTTTCAATCAAATCCATTGATCATGTGGTTTT
AACTGTCCAAAGCATTGACAAAACTATCAAATTTTATGAAGATTGTCTTA
ACATGAAAGTGGAAACTTTTGGTAATGGTAGAAAAGCTTTGAAATTTGGA
AATTCGAAATTCAATTTACATGAATATGGAAACGAGTTTGAACCAAAAGC
CAAAACACCACAACCAGGCTCAGTAGATATATGTTTGATTGCGGAAGAAA
AGTTACCAGTAATCATTGAACATCTTAAGGAACGTAATGTTGTTATTGAG
GAAGGGATTGTTCCTCGGACTGGTGCTTGTGGACCAATTCAATCAATTTA
TATTCGAGATCCAGATGAAAATTTAATTGAAATCTCAAATTATTAAAATT
CTGGTTTTTCTATTTTATATCTTGATCAGGAAAAGCTGAAAGACTAAAGC
ATATTATATAAATAATGTCACTGGGAAATAAGACAGCTTTGTTCATTATC
ATTTTGTTGGTTTTATGTTAAAGTTGGTTGATTTTGGGGTTGATTATACA
GTATAAGTGGTTTTTTTAATTTATAAATAAGAATCAAAAAAGTTTTCTAA
CAATGTTTTTTGATTGAAATCATATTTTTGATAGTATTTGATACTCCTTA
ATAGTTTCAATGAATTATACATCGTTTTTATAATCCTTATATTTTATTTG
TATTATAATTCATTATTTGAAAATATGAAAAGAATAAAATACTTCATTCT
TAAAATACTG Coding sequence (CDS) from alignment at sc0000664:33994..47753- >TCONS_00028112 ID=TCONS_00028112|Name=TCONS_00028112|organism=Clytia hemisphaerica|type=CDS|length=477bp|location=Sequence derived from alignment at sc0000664:33994..47753- (Clytia hemisphaerica)
ATGTCACAAACACCAATAAACCAGATGCAAGACAGGAAACCAGATATCAA
TATCTTAACACAACAACTTAAAACTGCCCAAAGTTTTGCCGGTCCAATTA
CTCCCACGGCTACAGTGAAGGTTGAACCGAAGGAAGAGGAACAGATGCCA
ACAAGTGGAACCAATTTATCAGAATTTGTTAACCAGCTTGAAGATTATGT
ACCAACAGTGCCAGATGCAGTCACTGTCAGTTATATGCAAAGAGCTGGTT
TTGAGAATATTGATCCACGTATAGTAAGATTGATATCATTAGCATCTCAA
AAGTTTGTATCAGACATTGCTCACGATGCGTTGCAACATTGTAAAATGCG
TGGTCAAAGTGGACAGAGCTCCCGTAAATCAGGAAAAGATAAGAGATATA
CTTTATCAATGGATGATTTGAGCCCTGCATTGAATGAATACGGAGTACAT
GTTAAAAAACCTCCATATTTTACATAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this transcript:
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00028112-exon-sc0000664-1575043694:47486..47753 | TCONS_00028112-exon-sc0000664-1575043694:47486..47753 | Clytia hemisphaerica | exon |
| TCONS_00028112-exon-sc0000664-1575043694:33994..35995 | TCONS_00028112-exon-sc0000664-1575043694:33994..35995 | Clytia hemisphaerica | exon |
| TCONS_00028112-exon-sc0000664-1510915933:47486..47753 | TCONS_00028112-exon-sc0000664-1510915933:47486..47753 | Clytia hemisphaerica | exon |
| TCONS_00028112-exon-sc0000664-1510915933:33994..35995 | TCONS_00028112-exon-sc0000664-1510915933:33994..35995 | Clytia hemisphaerica | exon |
| TCONS_00028112-exon-sc0000664-1491911889:47486..47753 | TCONS_00028112-exon-sc0000664-1491911889:47486..47753 | Clytia hemisphaerica | exon |
| TCONS_00028112-exon-sc0000664-1491911889:33994..35995 | TCONS_00028112-exon-sc0000664-1491911889:33994..35995 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000664 | supercontig | sc0000664:33994..47753 - |
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
| Term | Definition |
|---|
| IPR003923 | TFIID_30kDa |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006352 | DNA-templated transcription, initiation |
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0005634 | nucleus |
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
| Category |
Term Accession |
Term Name |
| biological_process |
GO:0006352 |
DNA-templated transcription, initiation |
| cellular_component |
GO:0005634 |
nucleus |
Blast
BLAST of TCONS_00028112 vs. Swiss-Prot (Human)
Match: GLOD5 (Glyoxalase domain-containing protein 5 OS=Homo sapiens GN=GLOD5 PE=1 SV=3) HSP 1 Score: 159.073 bits (401), Expect = 1.037e-44 Identity = 79/126 (62.70%), Postives = 92/126 (73.02%), Query Frame = 2
Query: 1535 IKSIDHVVLTVQSIDKTIKFYEDCLNMKVETFGNGRKALKFGNSKFNLHEYGNEFEPKAKTPQPGSVDICLIAEEKLPVIIEHLKERNVVIEEGIVPRTGACGPIQSIYIRDPDENLIEISNY*NS 1912
I+ +DH+V+TV+SI T FY L M+V TF RKAL FG+ KFNLHE G EFEPKA P PGS+DICLI E L +I+HLK +V IEEG VPRTGA GPI SIY RDPD NLIE+SNY +S
Sbjct: 35 IRRLDHIVMTVKSIKDTTMFYSKILGMEVMTFKEDRKALCFGDQKFNLHEVGKEFEPKAAHPVPGSLDICLITEVPLEEMIQHLKACDVPIEEGPVPRTGAKGPIMSIYFRDPDRNLIEVSNYISS 160
The following BLAST results are available for this feature:
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