TCONS_00028005 (transcript) - C. hemisphaerica

Overview
NameTCONS_00028005
Unique NameTCONS_00028005
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2239

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00028005 ID=TCONS_00028005|Name=TCONS_00028005|organism=Clytia hemisphaerica|type=transcript|length=2239bp
TATGGTGATCAAATTGAATCTAATAAAAACACGTTCGACATTTTTGAAAG
TGAAATCTTCAATATCGTGGAAAATTCAAATTGTATCTACAGCAAATCTT
CTGCAAATATTGAACTTATTGAAGAAATGGAATTTTCAGCAAAACATCCA
ACGCtttttaaaaaacaatctgaaaaaATAAATGCAGTTAATCCTGGTGA
AGAGGTTGTGTTACGGAGTGAAAAGCTAGAGAATGATGAATTATTTGTTA
AAACTATTGAACCTAAAGCTAAAAAGATTGAACCACTGGTAATTCAAAAT
CTCAAATTCTCTACACAAAATCCCCAAAGAAACCATCCACCTGAATGTCT
TAACAATGTTTTAGCTATGgaacatcaaaatatttctaGTAAAGTTTCAG
CTGGTGACTTAGAAATCAAATCATTGCCGCTAATGGGAAAACAAAACCTC
TTTGGCCCAAAGCCCCATAGAATATACGTGGATGAAGGTAATAACCAATC
TAAAGAACAACTAAACATTCCTGGACACACTGAGATAACCAACGGTCTTG
AATCCGGAGAAATCGATTCTTCTTCTGGTGATTTGACGAAGAACGCCAAT
GAAAATGATGACCCTTGGTTTCATTGTCTTGAATGTGGTTCACAATTCCT
TCGTAAACACAAGTTAGTCATACATTTGAGAAAGGAGCATGGGTTGAAAC
ACGAATTGAACAAATATGTGACCATGAAACAATGTATCAAAGAACATGGA
GGCGAACATATTCCTTTGCTTTGCCCCAAACGTAAATGCAAAGAATATGT
ATGTAGTGGTGACATTTTTAAAACACACATGAAGATATATCATAAGAAAA
GTTTCTCTGATTTGAAAATTGCTAAATTGATTGAAGGCCAATGGAACGGG
CGTACGAGTATTAAATCCAAAGATATTTGGTTTGGTCCGTATAATAATAA
AACGACAGAAAATTCTGAATCATGGGACAACTACAATCTTCAATCCGATT
ATCCGTCACTTAAATGTCAAAAGACGGTGAAAGTTTTCACATCAAACGTA
AGCGAATCTTTACACACCAAAGAAAATGGAGTTGAGTTTGAATCAGTTGA
AAACTCCTTTTCCAAAATCGACAAATCATTCGAACCTGCTGACAGTCTTC
CATATCTTTCgtcaaaatcaccaaatttaAAGAACTTTGAAATATGTAAT
GAACCTGATGCAACCTTGTCAATAGATCAACTACCAAAGTCTGAAGTCGG
TAAATTCGATTCTCCCGTTCGGATTAAGACGGAAAAATTCATCACTGTTA
CACCCGTAGAAAGAAACCCTCCTTATCGCGTTGAACAGGCTAATAAAGTA
TTAACTCCAACGGAAATTCTTGCAATtgtcaaaaatcaaacaaagatttc
tCAAGTAAAGTATAAAGCGTGCTCCGTACAAGATGAAGCGAAAGTTGCAC
TGATAGAGATCCCTAAGAAATTAACCAGAGAGGAAGGACAGAATACTCCA
AAAGTGAACTCTGTACATCTTCAATCGAGTATCCTTCGTTCTTCTGGTGA
GGAGAAAATTCTTATAACACCGTCAACTAAAGAAGGAAAAGGTGTCCTTA
ACATTGTCAACAGTATTGATTACACGAACTTGTCAGAAGATGCCGACTGT
GGGTCTTCAGAGAACCGAAAGTCTGCTCATTTAGAAGTGGATTATAATAA
TCGTTTTCAATGCGCAAATGAAACTAAGAATATGTTCATGGAAAACTCGT
TTAGTGTAAGAATGAATCCTTCCTCGAATCTGCTGATACCAAAACGAAAG
CTTTTTCAAGACTCGATACAGTCGGACGTCGACAATATACAACCGAGATG
TCAAAAGGAAAGCCAATTACATTCGAAGGTTGTTAAGgaCTTCGTAACAG
ATGTTGAAAACGTTGCCACAATGACCAAAATATTCATCAGtaaagCACCC
GAGTTGGAGAGCAAATTGACATCAATCTGTAAAGAAGTGTTGAAAGAAAT
GTCCCAACCTTTAAAACAGAATTTAGCTTCGAACTATCAGAACAAGCGGG
GAATTGGACaatatcactttcaaaatggtaaaataagaacattttaagaa
cattttttggcttaaaaagttaagaacaatcgaaagcttcaaaatttttg
gatgttcttataataaaacgtATACCCCAAATGAAGCTTCTCAAATGTCG
AAAAAACGTTGATGTGGTTTCGGTAATATGATATTTTTT
Run BLAST on NCBI

protein sequence of TCONS_00028005-protein

>TCONS_00028005-protein ID=TCONS_00028005-protein|Name=TCONS_00028005-protein|organism=Clytia hemisphaerica|type=polypeptide|length=698bp
YGDQIESNKNTFDIFESEIFNIVENSNCIYSKSSANIELIEEMEFSAKHP
TLFKKQSEKINAVNPGEEVVLRSEKLENDELFVKTIEPKAKKIEPLVIQN
LKFSTQNPQRNHPPECLNNVLAMEHQNISSKVSAGDLEIKSLPLMGKQNL
FGPKPHRIYVDEGNNQSKEQLNIPGHTEITNGLESGEIDSSSGDLTKNAN
ENDDPWFHCLECGSQFLRKHKLVIHLRKEHGLKHELNKYVTMKQCIKEHG
GEHIPLLCPKRKCKEYVCSGDIFKTHMKIYHKKSFSDLKIAKLIEGQWNG
RTSIKSKDIWFGPYNNKTTENSESWDNYNLQSDYPSLKCQKTVKVFTSNV
SESLHTKENGVEFESVENSFSKIDKSFEPADSLPYLSSKSPNLKNFEICN
EPDATLSIDQLPKSEVGKFDSPVRIKTEKFITVTPVERNPPYRVEQANKV
LTPTEILAIVKNQTKISQVKYKACSVQDEAKVALIEIPKKLTREEGQNTP
KVNSVHLQSSILRSSGEEKILITPSTKEGKGVLNIVNSIDYTNLSEDADC
GSSENRKSAHLEVDYNNRFQCANETKNMFMENSFSVRMNPSSNLLIPKRK
LFQDSIQSDVDNIQPRCQKESQLHSKVVKDFVTDVENVATMTKIFISKAP
ELESKLTSICKEVLKEMSQPLKQNLASNYQNKRGIGQYHFQNGKIRTF
Run BLAST on NCBI

transcript from alignment at sc0000661:33600..38346+

Legend: exonCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00028005 ID=TCONS_00028005|Name=TCONS_00028005|organism=Clytia hemisphaerica|type=transcript|length=4747bp|location=Sequence derived from alignment at sc0000661:33600..38346+ (Clytia hemisphaerica)
TATGGTGATCAAATTGAATCTAATAAAAACACGTTCGACATTTTTGAAAG
TGAAATCTTCAATATCGTGGAAAATTCAAATTGTATCTACAGCAAATCTT
CTGCAAATATTGAACTTATTGAAGAAATGGAATTTTCAGCAAAACATCCA
ACGCtttttaaaaaacaatctgaaaaaATAAATGCAGTTAATCCTGGTGA
AGAGGTTGTGTTACGGAGTGAAAAGCTAGAGAATGATGAATTATTTGTTA
AAACTATTGAACCTAAAGCTAAAAAGATTGAACCACTGGTAATTCAAAAT
CTCAAATTCTCTACACAAAATCCCCAAAGAAACCATCCACCTGAATGTCT
TAACAATGTTTTAGCTATGgaacatcaaaatatttctaGTAAAGTTTCAG
CTGGTGACTTAGAAATCAAATCATTGCCGCTAATGGGAAAACAAAACCTC
TTTGGCCCAAAGCCCCATAGAATATACGTGGATGAAGGTAATAACCAATC
TAAAGAACAACTAAACATTCCTGGACACACTGAGATAACCAACGGTCTTG
AATCCGGAGAAATCGATTCTTCTTCTGGTGATTTGACGAAGAACGCCAAT
GAAAATGATGACCCTTGGTTTCATTGTCTTGAATGTGGTTCACAATTCCT
TCGTAAACACAAGTTAGTCATACATTTGAGAAAGGAGCATGGGTTGAAAC
ACGAATTGAACAAATATGTGACCATGAAACAATGTATCAAAGAACATGGA
GGCGAACATATACCTTTGCTTTACCCCAAACGTAAATGTAAAGAATATAT
ATGTAGTGGTGACATTTTTAAAACACACATGAAGATATATCATAAGAAAA
GTTTCTCTGAtttgaaaattgcaaaattgaTTGAAAGCCAATGGAACGGG
TGGACGAATATTAAATCCAAAGATATTTGGTTTGGTCCGTATAATAATAA
AACGACAGAAAATTCTGAATCATGGGACAACTACAATCTTCAATCCGATT
ATCCAtcccttaaatgtcaatatgaaaagaCGATGAAAGTTTTCACATCA
AACGTAAACGAATCTTTATACACCGAAAACGATTCCTTTCCTAGAATCGA
CAAATTATTCGAATCTGCTGATAGCCTTCCATATCTTTCGTCGAAATCAC
CAAATTTAAAGAACTTTGAAATATGTAATGAACCTGTCAAGAGCACCTTG
TCATTAGATCAACTACCAAAGTCGGAATTCAGTAAATCTGATTCTCCCGT
TCGGATTAAAATGGAAAAAGACATCACTGTTACACCCGTAGAAAGTCACC
CTCTTTGTCGCATCGAACAGGCTAACAAAGCATTGACACCAGCGGAAATT
CTTGCAATtgtcaaaaatcaaacaaagatttctCAAGTAAAGTATAAAGC
GTGCTCCGTACAAGATGAAGCGAAAGTTGCACTGGTAGAGATCCCTAAGA
AATTAACCAGAGAGGAAGGACAGAATACTCCAATAGTGGACTCTGTACAT
CATCAATCGAGTATCCTTCGTTCTTCTGACGAGGAGAAAATTCTTATAAC
ACCGTCAACTAAAGAAGGAAAAGGTGTCCTTAACATTGTCAACAGTATTG
ATTACACGAACTTGTCAGAAGATGCCGACTGTGGGTCTTCAGAGAGCCGA
AAGTCTGCTCATTTAGAAGTGGATTATAATAATCGTTTTCAATGCGCAAA
TGAAACTCAGAATANATGATATGACGAAGAACGCCAATGAAAACGATGAC
CCTTGGTTTCATTGTCTTGAATGTGGTTCACAATTCCTTCGTAAACACAA
GTTAGTCATACATTTGAGAAAGGAGCATGGGTTGAAACACGAGCTGAACA
AATATGTGACCATGAAACAATGTATAAAGGAACATAGAGGCGAACATATT
CCTTTGCTTTGCCCCAAACGTAAATGCAAAGAATATGTATGTAGTGGTGA
CATTTTTAAAACACACATGAAGATATATCATAAGAAAAGTTTCTCTGATT
TGAAAATTGCTAAATTGATTGAAGGCCAATGGAACGGGCGTACGAGTATT
AAATCCAAAGATATTTGGTTTGGTCCGTATAATAATAAAACGACAGAAAA
TTCTGAATCATGGGACAACTACAATCTTCAATCCGATTATCCGTCACTTA
AATGTCAAAAGACGGTGAAAGTTTTCACATCAAACGTAAGCGAATCTTTA
CACACCAAAGAAAATGGAGTTGAGTTTGAATCAGTTGAAAACTCCTTTTC
CAAAATCGACAAATCATTCGAACCTGCTGACAGTCTTCCATATCTTTCgt
caaaatcaccaaatttaAAGAACTTTGAAATATGTAATGAACCTGATGCA
ACCTTGTCAATAGATCAACTACCAAAGTCTGAAGTCGGTAAATTCGATTC
TCCCGTTCGGATTAAGACGGAAAAATTCATCACTGTTACACCCGTAGAAA
GAAACCCTCCTTATCGCGTTGAACAGGCTAATAAAGTATTAACTCCAACG
GAAATTCTTGCAATtgtcaaaaatcaaacaaagatttctCAAGTAAAGTA
TAAAGCGTGCTCCGTACAAGATGAAGCGAAAGTTGCACTGATAGAGATCC
CTAAGAAATTAACCAGAGAGGAAGGACAGAATACTCCAAAAGTGAACTCT
GTACATCTTCAATCGAGTATCCTTCGTTCTTCTGGTGAGGAGAAAATTCT
TATAACACCGTCAACTAAAGAAGGAAAAGGTGTCCTTAACATTGTCAACA
GTATTGATTACACGAACTTGTCAGAAGATGCCGACTGTGGGTCTTCAGAG
AACCGAAAGTCTGCTCATTTAGAAGTGGATTATAATAATCGTTTTCAATG
CGCAAATGAAACTAAGAATATGTTCATGGAAAACTCGTTTAGTGTAAGAA
TGAATCCTTCCTCGAATCTGCTGATACCAAAACGAAAGCTTTTTCAAGAC
TCGATACAGTCGGACGTCGACAATATACAACCGAGATGTCAAAAGGAAAG
CCAATTACATTCGAAGGTTGTTAAGGTACAACAAATCTTTTTGTGTTTCC
ATTTGACCTTTATGCCTTATAAACGCCATCCcctgtatcccgctgcatac
ggtttgtttacaaatttcgtcagtacttttatgccctttaattttagaaa
aaatatgtagctatcaaaagaaaaattccctctttgctctaaatagcctg
attttaatTTATTATCTCCCTTACATGTTCAGCTGTACATTTCCCATCAT
CCAGgaaattacccccccccctagtttattaaagattttttcattctttt
gttttaggaCTTCGTAACAGATGTTGAAAACGTTGCCACAATGACCAAAA
TATTCATCAGGTAAAATATAACGATGTTTTATagtgaatttttctaaaat
gtaaTCTcgataatttaaaaaataatcctaATTTCTCGTGCTGATTTTCT
GCCAGGGCCATTTTCTGGAAAGGTAATGTAAACTGTAGAATGTACATTTG
ACTTGAGGTAATTGTGAAATTTAATTGCTTGTAGAATTTTTAGATTAGGT
AAGATGTTTAGATTTCTAACTACTTTTatctaggctgctggcatccattA
ACGGATTTGTgctcctatactacctggggttttgtagaggtctgaaATTC
AGACTAAACTACTTCGTGTTCTTCGTTGAGGTCATCGAACTTAATATAAA
CACCCTGGAAGTTTTTGAAAGTTGTACTTTATAAATGTAATtagttaagg
cttggggacacgagaagtctttttcgcgttggtgcaatgcaacatgctcc
ttcccaccaacacaagaaaaaaatgcgtgtctcatggtttcttcttttat
ttcatgggacaaaaagtgagggaaatacccaaaagacacgctgattttgt
ccaacgaaagtgagatttcacttttattggtagaaagaaaaatggggtgg
agacacgagaaagcgttttaggttggtgggatggagcatgttgcaatgca
ccaacgcgaaaaagacttcttgtgtccccaagccttaagtcAACCAATCT
ATcacgtttttcattttcagtaaagCACCCGAGTTGGAGAGCAAATTGAC
ATCAATCTGTAAAGAAGTGTTGAAAGAAATGTCCCAACCTTTAAAACAGA
ATTTAGCTTCGAACTATCAGAACAAGCGGGGTTTGTAACGACCATTATCT
GTGATGTGCTATTATTGTCGTGTTTTATGTCGTGTTTttgtgtttgttgt
ttttttaataaaatcttcatATCGTGTTTTCGAAGGTATTTTACGCATTG
TAAAGCCTTGCGTTCTGCGACATTTAGCTTGATACAGATTTAGATGTCGG
ACTACCCAAGACTACCTATACTTTCCGTATTCTAGTACACATTtctttat
gagaacaaactatataataacACAAGTCttccatggccaaaatattaaga
acaagtctagaaaattttaaggccttatagactctaaaacacccgatttt
tttaGGAATTGGACAATATCTCTTANTTTggagactctaaaacacccgat
ttttttaGGAATTGGACaatatcactttcaaaatggtaaaataagaacat
tttaagaacattttttggcttaaaaagttaagaacaatcgaaagcttcaa
aatttttggatgttcttataataaaacgtATACCCCAAATGAAGCTTCTC
AAATGTCGAAAAAACGTTGATGTGGTTTCGGTAATATGATATTTTTT

Coding sequence (CDS) from alignment at sc0000661:33600..38346+

>TCONS_00028005 ID=TCONS_00028005|Name=TCONS_00028005|organism=Clytia hemisphaerica|type=CDS|length=10485bp|location=Sequence derived from alignment at sc0000661:33600..38346+ (Clytia hemisphaerica)
TATGGTGATCAAATTGAATCTAATAAAAACACGTTCGACATTTTTGAAAG
TGAAATCTTCAATATCGTGGAAAATTCAAATTGTATCTACAGCAAATCTT
CTGCAAATATTGAACTTATTGAAGAAATGGAATTTTCAGCAAAACATCCA
ACGCtttttaaaaaacaatctgaaaaaATAAATGCAGTTAATCCTGGTGA
AGAGGTTGTGTTACGGAGTGAAAAGCTAGAGAATGATGAATTATTTGTTA
AAACTATTGAACCTAAAGCTAAAAAGATTGAACCACTGGTAATTCAAAAT
CTCAAATTCTCTACACAAAATCCCCAAAGAAACCATCCACCTGAATGTCT
TAACAATGTTTTAGCTATGgaacatcaaaatatttctaGTAAAGTTTCAG
CTGGTGACTTAGAAATCAAATCATTGCCGCTAATGGGAAAACAAAACCTC
TTTGGCCCAAAGCCCCATAGAATATACGTGGATGAAGGTAATAACCAATC
TAAAGAACAACTAAACATTCCTGGACACACTGAGATAACCAACGGTCTTG
AATCCGGAGAAATCGATTCTTCTTCTGGTGATTTGACGAAGAACGCCAAT
GAAAATGATGACCCTTGGTTTCATTGTCTTGAATGTGGTTCACAATTCCT
TCGTAAACACAAGTTAGTCATACATTTGAGAAAGGAGCATGGGTTGAAAC
ACGAATTGAACAAATATGTGACCATGAAACAATGTATCAAAGAACATGGA
GGCGAACATATTCCTTTGCTTTGCCCCAAACGTAAATGCAAAGAATATGT
ATGTAGTGGTGACATTTTTAAAACACACATGAAGATATATCATAAGAAAA
GTTTCTCTGATTTGAAAATTGCTAAATTGATTGAAGGCCAATGGAACGGG
CGTACGAGTATTAAATCCAAAGATATTTGGTTTGGTCCGTATAATAATAA
AACGACAGAAAATTCTGAATCATGGGACAACTACAATCTTCAATCCGATT
ATCCGTCACTTAAATGTCAAAAGACGGTGAAAGTTTTCACATCAAACGTA
AGCGAATCTTTACACACCAAAGAAAATGGAGTTGAGTTTGAATCAGTTGA
AAACTCCTTTTCCAAAATCGACAAATCATTCGAACCTGCTGACAGTCTTC
CATATCTTTCgtcaaaatcaccaaatttaAAGAACTTTGAAATATGTAAT
GAACCTGATGCAACCTTGTCAATAGATCAACTACCAAAGTCTGAAGTCGG
TAAATTCGATTCTCCCGTTCGGATTAAGACGGAAAAATTCATCACTGTTA
CACCCGTAGAAAGAAACCCTCCTTATCGCGTTGAACAGGCTAATAAAGTA
TTAACTCCAACGGAAATTCTTGCAATtgtcaaaaatcaaacaaagatttc
tCAAGTAAAGTATAAAGCGTGCTCCGTACAAGATGAAGCGAAAGTTGCAC
TGATAGAGATCCCTAAGAAATTAACCAGAGAGGAAGGACAGAATACTCCA
AAAGTGAACTCTGTACATCTTCAATCGAGTATCCTTCGTTCTTCTGGTGA
GGAGAAAATTCTTATAACACCGTCAACTAAAGAAGGAAAAGGTGTCCTTA
ACATTGTCAACAGTATTGATTACACGAACTTGTCAGAAGATGCCGACTGT
GGGTCTTCAGAGAACCGAAAGTCTGCTCATTTAGAAGTGGATTATAATAA
TCGTTTTCAATGCGCAAATGAAACTAAGAATATGTTCATGGAAAACTCGT
TTAGTGTAAGAATGAATCCTTCCTCGAATCTGCTGATACCAAAACGAAAG
CTTTTTCAAGACTCGATACAGTCGGACGTCGACAATATACAACCGAGATG
TCAAAAGGAAAGCCAATTACATTCGAAGGTTGTTAAGgaCTTCGTAACAG
ATGTTGAAAACGTTGCCACAATGACCAAAATATTCATCAGtaaagCACCC
GAGTTGGAGAGCAAATTGACATCAATCTGTAAAGAAGTGTTGAAAGAAAT
GTCCCAACCTTTAAAACAGAATTTAGCTTCGAACTATCAGAACAAGCGGG
GAATTGGACaatatcactttcaaaatggtaaaataagaacattttaaTAT
GGTGATCAAATTGAATCTAATAAAAACACGTTCGACATTTTTGAAAGTGA
AATCTTCAATATCGTGGAAAATTCAAATTGTATCTACAGCAAATCTTCTG
CAAATATTGAACTTATTGAAGAAATGGAATTTTCAGCAAAACATCCAACG
CtttttaaaaaacaatctgaaaaaATAAATGCAGTTAATCCTGGTGAAGA
GGTTGTGTTACGGAGTGAAAAGCTAGAGAATGATGAATTATTTGTTAAAA
CTATTGAACCTAAAGCTAAAAAGATTGAACCACTGGTAATTCAAAATCTC
AAATTCTCTACACAAAATCCCCAAAGAAACCATCCACCTGAATGTCTTAA
CAATGTTTTAGCTATGgaacatcaaaatatttctaGTAAAGTTTCAGCTG
GTGACTTAGAAATCAAATCATTGCCGCTAATGGGAAAACAAAACCTCTTT
GGCCCAAAGCCCCATAGAATATACGTGGATGAAGGTAATAACCAATCTAA
AGAACAACTAAACATTCCTGGACACACTGAGATAACCAACGGTCTTGAAT
CCGGAGAAATCGATTCTTCTTCTGGTGATTTGACGAAGAACGCCAATGAA
AATGATGACCCTTGGTTTCATTGTCTTGAATGTGGTTCACAATTCCTTCG
TAAACACAAGTTAGTCATACATTTGAGAAAGGAGCATGGGTTGAAACACG
AATTGAACAAATATGTGACCATGAAACAATGTATCAAAGAACATGGAGGC
GAACATATTCCTTTGCTTTGCCCCAAACGTAAATGCAAAGAATATGTATG
TAGTGGTGACATTTTTAAAACACACATGAAGATATATCATAAGAAAAGTT
TCTCTGATTTGAAAATTGCTAAATTGATTGAAGGCCAATGGAACGGGCGT
ACGAGTATTAAATCCAAAGATATTTGGTTTGGTCCGTATAATAATAAAAC
GACAGAAAATTCTGAATCATGGGACAACTACAATCTTCAATCCGATTATC
CGTCACTTAAATGTCAAAAGACGGTGAAAGTTTTCACATCAAACGTAAGC
GAATCTTTACACACCAAAGAAAATGGAGTTGAGTTTGAATCAGTTGAAAA
CTCCTTTTCCAAAATCGACAAATCATTCGAACCTGCTGACAGTCTTCCAT
ATCTTTCgtcaaaatcaccaaatttaAAGAACTTTGAAATATGTAATGAA
CCTGATGCAACCTTGTCAATAGATCAACTACCAAAGTCTGAAGTCGGTAA
ATTCGATTCTCCCGTTCGGATTAAGACGGAAAAATTCATCACTGTTACAC
CCGTAGAAAGAAACCCTCCTTATCGCGTTGAACAGGCTAATAAAGTATTA
ACTCCAACGGAAATTCTTGCAATtgtcaaaaatcaaacaaagatttctCA
AGTAAAGTATAAAGCGTGCTCCGTACAAGATGAAGCGAAAGTTGCACTGA
TAGAGATCCCTAAGAAATTAACCAGAGAGGAAGGACAGAATACTCCAAAA
GTGAACTCTGTACATCTTCAATCGAGTATCCTTCGTTCTTCTGGTGAGGA
GAAAATTCTTATAACACCGTCAACTAAAGAAGGAAAAGGTGTCCTTAACA
TTGTCAACAGTATTGATTACACGAACTTGTCAGAAGATGCCGACTGTGGG
TCTTCAGAGAACCGAAAGTCTGCTCATTTAGAAGTGGATTATAATAATCG
TTTTCAATGCGCAAATGAAACTAAGAATATGTTCATGGAAAACTCGTTTA
GTGTAAGAATGAATCCTTCCTCGAATCTGCTGATACCAAAACGAAAGCTT
TTTCAAGACTCGATACAGTCGGACGTCGACAATATACAACCGAGATGTCA
AAAGGAAAGCCAATTACATTCGAAGGTTGTTAAGgaCTTCGTAACAGATG
TTGAAAACGTTGCCACAATGACCAAAATATTCATCAGtaaagCACCCGAG
TTGGAGAGCAAATTGACATCAATCTGTAAAGAAGTGTTGAAAGAAATGTC
CCAACCTTTAAAACAGAATTTAGCTTCGAACTATCAGAACAAGCGGGGAA
TTGGACaatatcactttcaaaatggtaaaataagaacattttaaTATGGT
GATCAAATTGAATCTAATAAAAACACGTTCGACATTTTTGAAAGTGAAAT
CTTCAATATCGTGGAAAATTCAAATTGTATCTACAGCAAATCTTCTGCAA
ATATTGAACTTATTGAAGAAATGGAATTTTCAGCAAAACATCCAACGCtt
tttaaaaaacaatctgaaaaaATAAATGCAGTTAATCCTGGTGAAGAGGT
TGTGTTACGGAGTGAAAAGCTAGAGAATGATGAATTATTTGTTAAAACTA
TTGAACCTAAAGCTAAAAAGATTGAACCACTGGTAATTCAAAATCTCAAA
TTCTCTACACAAAATCCCCAAAGAAACCATCCACCTGAATGTCTTAACAA
TGTTTTAGCTATGgaacatcaaaatatttctaGTAAAGTTTCAGCTGGTG
ACTTAGAAATCAAATCATTGCCGCTAATGGGAAAACAAAACCTCTTTGGC
CCAAAGCCCCATAGAATATACGTGGATGAAGGTAATAACCAATCTAAAGA
ACAACTAAACATTCCTGGACACACTGAGATAACCAACGGTCTTGAATCCG
GAGAAATCGATTCTTCTTCTGGTGATTTGACGAAGAACGCCAATGAAAAT
GATGACCCTTGGTTTCATTGTCTTGAATGTGGTTCACAATTCCTTCGTAA
ACACAAGTTAGTCATACATTTGAGAAAGGAGCATGGGTTGAAACACGAAT
TGAACAAATATGTGACCATGAAACAATGTATCAAAGAACATGGAGGCGAA
CATATTCCTTTGCTTTGCCCCAAACGTAAATGCAAAGAATATGTATGTAG
TGGTGACATTTTTAAAACACACATGAAGATATATCATAAGAAAAGTTTCT
CTGATTTGAAAATTGCTAAATTGATTGAAGGCCAATGGAACGGGCGTACG
AGTATTAAATCCAAAGATATTTGGTTTGGTCCGTATAATAATAAAACGAC
AGAAAATTCTGAATCATGGGACAACTACAATCTTCAATCCGATTATCCGT
CACTTAAATGTCAAAAGACGGTGAAAGTTTTCACATCAAACGTAAGCGAA
TCTTTACACACCAAAGAAAATGGAGTTGAGTTTGAATCAGTTGAAAACTC
CTTTTCCAAAATCGACAAATCATTCGAACCTGCTGACAGTCTTCCATATC
TTTCgtcaaaatcaccaaatttaAAGAACTTTGAAATATGTAATGAACCT
GATGCAACCTTGTCAATAGATCAACTACCAAAGTCTGAAGTCGGTAAATT
CGATTCTCCCGTTCGGATTAAGACGGAAAAATTCATCACTGTTACACCCG
TAGAAAGAAACCCTCCTTATCGCGTTGAACAGGCTAATAAAGTATTAACT
CCAACGGAAATTCTTGCAATtgtcaaaaatcaaacaaagatttctCAAGT
AAAGTATAAAGCGTGCTCCGTACAAGATGAAGCGAAAGTTGCACTGATAG
AGATCCCTAAGAAATTAACCAGAGAGGAAGGACAGAATACTCCAAAAGTG
AACTCTGTACATCTTCAATCGAGTATCCTTCGTTCTTCTGGTGAGGAGAA
AATTCTTATAACACCGTCAACTAAAGAAGGAAAAGGTGTCCTTAACATTG
TCAACAGTATTGATTACACGAACTTGTCAGAAGATGCCGACTGTGGGTCT
TCAGAGAACCGAAAGTCTGCTCATTTAGAAGTGGATTATAATAATCGTTT
TCAATGCGCAAATGAAACTAAGAATATGTTCATGGAAAACTCGTTTAGTG
TAAGAATGAATCCTTCCTCGAATCTGCTGATACCAAAACGAAAGCTTTTT
CAAGACTCGATACAGTCGGACGTCGACAATATACAACCGAGATGTCAAAA
GGAAAGCCAATTACATTCGAAGGTTGTTAAGgaCTTCGTAACAGATGTTG
AAAACGTTGCCACAATGACCAAAATATTCATCAGtaaagCACCCGAGTTG
GAGAGCAAATTGACATCAATCTGTAAAGAAGTGTTGAAAGAAATGTCCCA
ACCTTTAAAACAGAATTTAGCTTCGAACTATCAGAACAAGCGGGGAATTG
GACaatatcactttcaaaatggtaaaataagaacattttaaTATGGTGAT
CAAATTGAATCTAATAAAAACACGTTCGACATTTTTGAAAGTGAAATCTT
CAATATCGTGGAAAATTCAAATTGTATCTACAGCAAATCTTCTGCAAATA
TTGAACTTATTGAAGAAATGGAATTTTCAGCAAAACATCCAACGCttttt
aaaaaacaatctgaaaaaATAAATGCAGTTAATCCTGGTGAAGAGGTTGT
GTTACGGAGTGAAAAGCTAGAGAATGATGAATTATTTGTTAAAACTATTG
AACCTAAAGCTAAAAAGATTGAACCACTGGTAATTCAAAATCTCAAATTC
TCTACACAAAATCCCCAAAGAAACCATCCACCTGAATGTCTTAACAATGT
TTTAGCTATGgaacatcaaaatatttctaGTAAAGTTTCAGCTGGTGACT
TAGAAATCAAATCATTGCCGCTAATGGGAAAACAAAACCTCTTTGGCCCA
AAGCCCCATAGAATATACGTGGATGAAGGTAATAACCAATCTAAAGAACA
ACTAAACATTCCTGGACACACTGAGATAACCAACGGTCTTGAATCCGGAG
AAATCGATTCTTCTTCTGGTGATTTGACGAAGAACGCCAATGAAAATGAT
GACCCTTGGTTTCATTGTCTTGAATGTGGTTCACAATTCCTTCGTAAACA
CAAGTTAGTCATACATTTGAGAAAGGAGCATGGGTTGAAACACGAATTGA
ACAAATATGTGACCATGAAACAATGTATCAAAGAACATGGAGGCGAACAT
ATTCCTTTGCTTTGCCCCAAACGTAAATGCAAAGAATATGTATGTAGTGG
TGACATTTTTAAAACACACATGAAGATATATCATAAGAAAAGTTTCTCTG
ATTTGAAAATTGCTAAATTGATTGAAGGCCAATGGAACGGGCGTACGAGT
ATTAAATCCAAAGATATTTGGTTTGGTCCGTATAATAATAAAACGACAGA
AAATTCTGAATCATGGGACAACTACAATCTTCAATCCGATTATCCGTCAC
TTAAATGTCAAAAGACGGTGAAAGTTTTCACATCAAACGTAAGCGAATCT
TTACACACCAAAGAAAATGGAGTTGAGTTTGAATCAGTTGAAAACTCCTT
TTCCAAAATCGACAAATCATTCGAACCTGCTGACAGTCTTCCATATCTTT
CgtcaaaatcaccaaatttaAAGAACTTTGAAATATGTAATGAACCTGAT
GCAACCTTGTCAATAGATCAACTACCAAAGTCTGAAGTCGGTAAATTCGA
TTCTCCCGTTCGGATTAAGACGGAAAAATTCATCACTGTTACACCCGTAG
AAAGAAACCCTCCTTATCGCGTTGAACAGGCTAATAAAGTATTAACTCCA
ACGGAAATTCTTGCAATtgtcaaaaatcaaacaaagatttctCAAGTAAA
GTATAAAGCGTGCTCCGTACAAGATGAAGCGAAAGTTGCACTGATAGAGA
TCCCTAAGAAATTAACCAGAGAGGAAGGACAGAATACTCCAAAAGTGAAC
TCTGTACATCTTCAATCGAGTATCCTTCGTTCTTCTGGTGAGGAGAAAAT
TCTTATAACACCGTCAACTAAAGAAGGAAAAGGTGTCCTTAACATTGTCA
ACAGTATTGATTACACGAACTTGTCAGAAGATGCCGACTGTGGGTCTTCA
GAGAACCGAAAGTCTGCTCATTTAGAAGTGGATTATAATAATCGTTTTCA
ATGCGCAAATGAAACTAAGAATATGTTCATGGAAAACTCGTTTAGTGTAA
GAATGAATCCTTCCTCGAATCTGCTGATACCAAAACGAAAGCTTTTTCAA
GACTCGATACAGTCGGACGTCGACAATATACAACCGAGATGTCAAAAGGA
AAGCCAATTACATTCGAAGGTTGTTAAGgaCTTCGTAACAGATGTTGAAA
ACGTTGCCACAATGACCAAAATATTCATCAGtaaagCACCCGAGTTGGAG
AGCAAATTGACATCAATCTGTAAAGAAGTGTTGAAAGAAATGTCCCAACC
TTTAAAACAGAATTTAGCTTCGAACTATCAGAACAAGCGGGGAATTGGAC
aatatcactttcaaaatggtaaaataagaacattttaaTATGGTGATCAA
ATTGAATCTAATAAAAACACGTTCGACATTTTTGAAAGTGAAATCTTCAA
TATCGTGGAAAATTCAAATTGTATCTACAGCAAATCTTCTGCAAATATTG
AACTTATTGAAGAAATGGAATTTTCAGCAAAACATCCAACGCtttttaaa
aaacaatctgaaaaaATAAATGCAGTTAATCCTGGTGAAGAGGTTGTGTT
ACGGAGTGAAAAGCTAGAGAATGATGAATTATTTGTTAAAACTATTGAAC
CTAAAGCTAAAAAGATTGAACCACTGGTAATTCAAAATCTCAAATTCTCT
ACACAAAATCCCCAAAGAAACCATCCACCTGAATGTCTTAACAATGTTTT
AGCTATGgaacatcaaaatatttctaGTAAAGTTTCAGCTGGTGACTTAG
AAATCAAATCATTGCCGCTAATGGGAAAACAAAACCTCTTTGGCCCAAAG
CCCCATAGAATATACGTGGATGAAGGTAATAACCAATCTAAAGAACAACT
AAACATTCCTGGACACACTGAGATAACCAACGGTCTTGAATCCGGAGAAA
TCGATTCTTCTTCTGGTGATTTGACGAAGAACGCCAATGAAAATGATGAC
CCTTGGTTTCATTGTCTTGAATGTGGTTCACAATTCCTTCGTAAACACAA
GTTAGTCATACATTTGAGAAAGGAGCATGGGTTGAAACACGAATTGAACA
AATATGTGACCATGAAACAATGTATCAAAGAACATGGAGGCGAACATATT
CCTTTGCTTTGCCCCAAACGTAAATGCAAAGAATATGTATGTAGTGGTGA
CATTTTTAAAACACACATGAAGATATATCATAAGAAAAGTTTCTCTGATT
TGAAAATTGCTAAATTGATTGAAGGCCAATGGAACGGGCGTACGAGTATT
AAATCCAAAGATATTTGGTTTGGTCCGTATAATAATAAAACGACAGAAAA
TTCTGAATCATGGGACAACTACAATCTTCAATCCGATTATCCGTCACTTA
AATGTCAAAAGACGGTGAAAGTTTTCACATCAAACGTAAGCGAATCTTTA
CACACCAAAGAAAATGGAGTTGAGTTTGAATCAGTTGAAAACTCCTTTTC
CAAAATCGACAAATCATTCGAACCTGCTGACAGTCTTCCATATCTTTCgt
caaaatcaccaaatttaAAGAACTTTGAAATATGTAATGAACCTGATGCA
ACCTTGTCAATAGATCAACTACCAAAGTCTGAAGTCGGTAAATTCGATTC
TCCCGTTCGGATTAAGACGGAAAAATTCATCACTGTTACACCCGTAGAAA
GAAACCCTCCTTATCGCGTTGAACAGGCTAATAAAGTATTAACTCCAACG
GAAATTCTTGCAATtgtcaaaaatcaaacaaagatttctCAAGTAAAGTA
TAAAGCGTGCTCCGTACAAGATGAAGCGAAAGTTGCACTGATAGAGATCC
CTAAGAAATTAACCAGAGAGGAAGGACAGAATACTCCAAAAGTGAACTCT
GTACATCTTCAATCGAGTATCCTTCGTTCTTCTGGTGAGGAGAAAATTCT
TATAACACCGTCAACTAAAGAAGGAAAAGGTGTCCTTAACATTGTCAACA
GTATTGATTACACGAACTTGTCAGAAGATGCCGACTGTGGGTCTTCAGAG
AACCGAAAGTCTGCTCATTTAGAAGTGGATTATAATAATCGTTTTCAATG
CGCAAATGAAACTAAGAATATGTTCATGGAAAACTCGTTTAGTGTAAGAA
TGAATCCTTCCTCGAATCTGCTGATACCAAAACGAAAGCTTTTTCAAGAC
TCGATACAGTCGGACGTCGACAATATACAACCGAGATGTCAAAAGGAAAG
CCAATTACATTCGAAGGTTGTTAAGgaCTTCGTAACAGATGTTGAAAACG
TTGCCACAATGACCAAAATATTCATCAGtaaagCACCCGAGTTGGAGAGC
AAATTGACATCAATCTGTAAAGAAGTGTTGAAAGAAATGTCCCAACCTTT
AAAACAGAATTTAGCTTCGAACTATCAGAACAAGCGGGGAATTGGACaat
atcactttcaaaatggtaaaataagaacattttaa
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_015849XLOC_015849Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00028005-proteinTCONS_00028005-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00028005-exon-sc0000661-1491911889:33600..34350TCONS_00028005-exon-sc0000661-1491911889:33600..34350Clytia hemisphaericaexon
TCONS_00028005-exon-sc0000661-1510915933:33600..34350TCONS_00028005-exon-sc0000661-1510915933:33600..34350Clytia hemisphaericaexon
TCONS_00028005-exon-sc0000661-1575043694:33600..34350TCONS_00028005-exon-sc0000661-1575043694:33600..34350Clytia hemisphaericaexon
TCONS_00028005-exon-sc0000661-1491911889:35489..36624TCONS_00028005-exon-sc0000661-1491911889:35489..36624Clytia hemisphaericaexon
TCONS_00028005-exon-sc0000661-1510915933:35489..36624TCONS_00028005-exon-sc0000661-1510915933:35489..36624Clytia hemisphaericaexon
TCONS_00028005-exon-sc0000661-1575043694:35489..36624TCONS_00028005-exon-sc0000661-1575043694:35489..36624Clytia hemisphaericaexon
TCONS_00028005-exon-sc0000661-1491911889:36907..36959TCONS_00028005-exon-sc0000661-1491911889:36907..36959Clytia hemisphaericaexon
TCONS_00028005-exon-sc0000661-1510915933:36907..36959TCONS_00028005-exon-sc0000661-1510915933:36907..36959Clytia hemisphaericaexon
TCONS_00028005-exon-sc0000661-1575043694:36907..36959TCONS_00028005-exon-sc0000661-1575043694:36907..36959Clytia hemisphaericaexon
TCONS_00028005-exon-sc0000661-1491911889:37670..37779TCONS_00028005-exon-sc0000661-1491911889:37670..37779Clytia hemisphaericaexon
TCONS_00028005-exon-sc0000661-1510915933:37670..37779TCONS_00028005-exon-sc0000661-1510915933:37670..37779Clytia hemisphaericaexon
TCONS_00028005-exon-sc0000661-1575043694:37670..37779TCONS_00028005-exon-sc0000661-1575043694:37670..37779Clytia hemisphaericaexon
TCONS_00028005-exon-sc0000661-1491911889:38158..38346TCONS_00028005-exon-sc0000661-1491911889:38158..38346Clytia hemisphaericaexon
TCONS_00028005-exon-sc0000661-1510915933:38158..38346TCONS_00028005-exon-sc0000661-1510915933:38158..38346Clytia hemisphaericaexon
TCONS_00028005-exon-sc0000661-1575043694:38158..38346TCONS_00028005-exon-sc0000661-1575043694:38158..38346Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000661supercontigsc0000661:33600..38346 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.0740738	0	0.381109	0	0	0	0	0	0.024873	0.534547	0.0109345	0.156258	0.0935357	0.155829	7.88038e-06	0.213248	0	0	0.181126	0.095005	0.127522	0	2.2074e-05	0	8.86847e-09	0	0.186707	0	0.148783	3.31679e-05
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR013087Znf_C2H2_type
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0003676 nucleic acid binding
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00028005 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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