TCONS_00027911 (transcript) - C. hemisphaerica

Overview
NameTCONS_00027911
Unique NameTCONS_00027911
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length165

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00027911 ID=TCONS_00027911|Name=TCONS_00027911|organism=Clytia hemisphaerica|type=transcript|length=165bp
tacTTAATAAATTACTGATTTCGTAATATCCCAATGATCCTTTTTATCCC
AATGATCCTTTTAAAGCAATGCTAAATCAAAAGCATTTTgatgcaaagaa
aaaataaaatgttcaataatttgaagccgCAGGTCCGCCATTTTTATTTA
CATgttcattttgtt
Run BLAST on NCBI

transcript from alignment at sc0000653:170857..171021

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00027911 ID=TCONS_00027911|Name=TCONS_00027911|organism=Clytia hemisphaerica|type=transcript|length=165bp|location=Sequence derived from alignment at sc0000653:170857..171021 (Clytia hemisphaerica)
aacaaaatgaacATGTAAATAAAAATGGCGGACCTGcggcttcaaattat
tgaacattttattttttctttgcatcAAAATGCTTTTGATTTAGCATTGC
TTTAAAAGGATCATTGGGATAAAAAGGATCATTGGGATATTACGAAATCA
GTAATTTATTAAgta
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_015780XLOC_015780Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00027911-exon-sc0000653-1491911889:170857..171021TCONS_00027911-exon-sc0000653-1491911889:170857..171021Clytia hemisphaericaexon
TCONS_00027911-exon-sc0000653-1510915933:170857..171021TCONS_00027911-exon-sc0000653-1510915933:170857..171021Clytia hemisphaericaexon
TCONS_00027911-exon-sc0000653-1575043694:170857..171021TCONS_00027911-exon-sc0000653-1575043694:170857..171021Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000653supercontigsc0000653:170857..171021 .
Expression
No biomaterial libraries express this feature.
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00027911 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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