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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00027891 ID=TCONS_00027891|Name=TCONS_00027891|organism=Clytia hemisphaerica|type=transcript|length=1895bp
GTTGTGCTCTGTGATGTCTGAGTAGAAGATTAAATTTAGTACATTTTAAA
ATGTATTACTTCAAATTATTATAACGATAATCTTTACATATTTGGAAAAT
GATGCAAGGGTGAAATAATGAGAAGGGGGAACGATAGATATTACTTTGAA
GCCTTGGAGAACTGTTTGCTGTGAAGCAAAAGCTCTATAGATGAGAACAA
AAGGATCAAATGATAAAAACTCGTAAAAACTATTGTTTTTAAAAGACCAA
CCAAGCGAAAAGAATCGGACACAGGCCTCCAACGTTTTTTTTGTACACGA
AGACTGCATAAGCATTTTCTGAGAGTCTGGTGAGACAAATCGCAGTTTTT
TGTCGCTCTCTTCTTGTCAGGGTTGTGATTTATCAATCAAtgattttttg
aagtgctttttcaaattttcattttctgaaaaagaagaaagaaaaaatcg
tGATTGtgaaaaaacaataacaaaggcACTGAGAAACTgtcaataatatt
tttggacATTGATGGAATGAACGAGCAGAGGAGCAGCATTGAAATAATAT
TATaaaccaaaatataaaaaaaaggaGGGCAAGTTTTACTTGAAAATACA
TTTTGTGAAAATAAATTGGCGTAGTGTAATCCAACACATACATCTGGGAA
GCAGTTGGAAAAGCAAGGCGAATAAAAAAAGgagaaattttgttgttttc
tctTATTTGAATTTTCATGCTGTGACGTCAGTGAGAAGTTCACCTACTTT
TTGTTTGGACAGGTTTGGAAATCAAaacgagaaaatttttgaactcCGGA
GTACATTAgatcaaataaaatttggacaaagaTTCTCACACCAAAGACAT
TGGGATCTGACTACTCTTTTCGGATACACACATATTGGGAGATGGCAGAG
GAAGAAAAGATTGCTCAGGATGCAACTAATTTCCTGTTCTTTGTTCAAGA
ACTTGCAGCAAAGTTACCAGCTAAGAAATTACGAGCGTTTAAAAAAGGAC
TGACAGAAGATCAGATAGACAACGAAGATGATAATGATTCTTGTGATTCT
GGCTATTCTGGATCCAGTGAAATTGCAACCGATAACAAAATGGCGGAAGT
CACTGCGGAAACGGGTAAACGATTCGAATGTTTAGTATGTGGGAAATTCT
TTAAACGACGTTCATCGCTTTCAACACATAAACTTATACATTTGAACGTC
AAACCATTCACGTGTACTGTGTGTGATAAAGAGTTTTTACGGAGATCAGA
CTTAAAGAAACATTCGTTAATGCATACAGGAAAGAAACCTCATGAATGTC
CTGATTGTGGTAAGGTATTTTCACAATCTTCAAATATGTTAACACATATG
AGGCGGCATACGGGCGTCCGCCCCTATTCGTGTAATATATGTGGACACGC
GTTTTACAGGAAAGTTGATGTCCGTCGACATCAGTCAagacattttaaag
aaaataatacgTTAAAGTTACATACAATCACTAATAAAGTCAATATTTCA
CCACCGCCATCAGCTACCGCCACGATTGCGCCCATGCCTTTTATACCGCC
AAGGCTACAAGGTGTAGCGCAACAACAAATAAAAATGTAAACTTTACGGA
CCAAACACAATATTGTTTTTTTACAACGGATGGTGcgtattttttggatt
ttttttcttttagtacATCTCTTTTTGAGTTTAATATTTGGAGTTATTTT
AGTAATGTATTATATTTGATATTAAGAAAAAAGTCAATACAAgcaattta
tctttttttctgcTAGAAACGATTTTTGTACATATATACCGACGAAACAA
CGTagaaacgaattttttttgtgcatttttaTTGTAATAAGAAGAAAACG
TAGTAAGATTATATACTCGTACTTCAATTAAAAATTATCTTCTTG Run BLAST on NCBI transcript from alignment at sc0000653:49767..58951+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00027891 ID=TCONS_00027891|Name=TCONS_00027891|organism=Clytia hemisphaerica|type=transcript|length=9185bp|location=Sequence derived from alignment at sc0000653:49767..58951+ (Clytia hemisphaerica)
GTTGTGCTCTGTGATGTCTGAGTAGAAGATTAAATTTAGTACATTTTAAA
ATGTATTACTTCAAATTATTATAACGATAATCTTTACATATTTGGAAAAT
GATGCAAGGGTGAAATAATGAGAAGGGGGAACGATAGATATTACTTTGAA
GCCTTGGAGAACTGTTTGCTGTGAAGCAAAAGGTTATGTATTTTACTTTG
AATTTGGATATGCAAACCGTAAATGATTCTGGCTAGGGTTTGAATATATA
GACATCAATTCCCAATAttaaaattggtaaaagatacagGGCGATGTATG
AATTATCGAGACTCAACTGGATTATTTCTATCCTTAATTCTtttgaacac
ccctgtctcatcggCCCGATGACTTCTCATTGTCCATCGTGGAATGCGCA
TTTCAACgggaaagaaaattaaatgtatttttCCAACTGGGAACACAGGA
gggtatttttgattttgatattttcatacCTACACCAATCTCAACCAATG
TGTGCAATTTGAATATCGTAGAGAAGATCTTCGTGCTTTAAGTTCAATCA
TATGGCTAAAAAGTTAGGATACGTTTTTGTGGTTTTTAGTTATAGTTTTA
AGATGTTAGAAAACGTCTATTTTCCTCTATTTTATAAAGCCTTATTTTTA
TTAACATTCTTTTGAATtgaatgtcaatttttgtgtGAGTCTTATTGTCT
CTCAAACCTAAACATTCTCAAAAACCGAATTCAGCTTTTTTTTTGTCAGA
AATGGCAAAATTGTCGTCTTTCGTGTCGATATAGCTGTTTAGCCGCGTTT
AGAAACTGCATCGACCTGCTCTATAATGAACCTTAATTAACTGACCTTTT
GTTAAAAAAGAGggtatttaatttttatgatCTTGAAGTTATTCGCTTAG
TATCCGGCCTTTAATTCGAAGAAACTATAGCTACGCAATTAAAAAATTCG
ATTGGTTTGAATAGCTTCTTTGCTCACTACTTAATGTCGCCGTGGTTAAT
gattttttctcttctctttttaaTTACAGCTCTATAGATGAGAACAAAAG
GATCAAATGATAAAAACTCGTAAAAACTATTGTTTTTAAAAGACCAACCA
AGCGAAAAGAATCGGACACAGGCCTCCAACGTTTTTTTTGTACACGAAGA
CTGCATAAGCATTTTCTGAGAGTCTGGTGAGACAAATCGCAGTTTTTTGT
CGCTCTCTTCTTGTCAGGGTTGTGATTTATCAATCAAtgattttttgaag
tgctttttcaaattttcattttctgaaaaagaagaaagaaaaaatcgtGA
TTGtgaaaaaacaataacaaaggcACTGAGAAACTgtcaataatattttt
ggacATTGATGGAATGAACGAGCAGAGGAGCAGCATTGAAATAATATTAT
aaaccaaaatataaaaaaaaggaGGGCAAGTTTTACTTGAAAATACATTT
TGTGAAAATAAATTGGCGTAGTGTAATCCAACACATACATCTGGGAAGCA
GTTGGAAAAGCAAGGCGAATAAAAAAAGgagaaattttgttgttttctct
TATTTGAATTTTCATGCTGTGACGTCAGTGAGAAGTTCACCTACTTTTTG
TTTGGACAGGTTTGGAAATCAAaacgagaaaatttttgaactcCGGAGTA
CATTAgatcaaataaaatttggacaaagaTTCTCACACCAAAGACATTGG
GATCTGACTACTCTTTTCGGATACACACATATTGGGAGATGGCAGAGGAA
GAAAAGATTGCTCAGGATGCAACTAATTTCCTGTTCTTTGTTCAAGGTAA
TAAAACTTATTGCTTTTTTCTTCTTAGTTTTCATTTCATTCGGGATTTCA
TTCTTCATTTTTCCCTGATTGATATGATCAATGGATTTTTGGGAATAAAT
GAGTAatagttttctttgttttcttaaattcgtaTTCACACCCCTCTCTC
GGTGACTGAAGGATTCTTAACCGGTGGGTGTGGGACAAAGGGACCAAATG
CCAATTAAAAATGGAACCTAATCTCCTATTTATAAAGGGTGGatatttca
aattcaattgTTCACACCTTCACACCTGGACTGGGTGTCAGAGTAGTATA
AAGGAATAAAGGTGAAATGGCAGGGACATGTGTCTGTTTCTGTttaattt
ttactgtttttccGCTTTatagaaatttctattttctttttctaaaggaa
aaaagtttaaatgtaTTTCCCAATTCGTTAAGTTGACAGAATTTTacaac
aatatttttctgatGGAAGCTGCTGAAATAAGATACATCCACTCCACCCC
TTGCCAGATTTTCCcctattttgttctttttaatgTCTTTAGAGGAACGA
TTCTAATGTAATGATTTTATCATCTAAAGCAAAACATATGTTTCCTAAGA
TCGTTTTTTAGACAATACAGGCCTTTTTGCCTCCAGTTTTTGTGCAGGAA
AGGATCATAAAAAATTTGGACATCAAATTTTctatacaaatttattttac
aaaatgtcTTTTACAAAATCTGGACTCACCCTTTTGTAGAAAATAGAAAT
AAGAAAAGATATTGTCTTTTTGCCCAACACATTAGCTTTTTTCAGAATAA
AGGAAAAATAGAGACCTTTCCCCTTTTCCTTAACAAGTTATTCCCCGTGG
AACTAAAATGCTTTAATAGTCTTGATGAGATTTAATATTTAGCACATTTT
ATTCATtccaaaaaaaaggtttttagggTTTGCTGTTTTTTCCTTGTCTT
TATATCTTTTCcacttctttaaagattttcattGAACAAAAAAAACTGGG
GAAAAAAAGTTGGGAAGAAATCTGAAAATCTGCTGTGATTTGTTTCAATT
TCCTTAAAGAAAATCTTAATCATGTCTTTGATCTTTCCTGTTTGCAACCT
AAGAGACTAAAAAATTAAGGAAATTGGTGCGCGCGCTGTGATTTTTTACC
GCGCGCGCTGTGATTTCTTATGTTATGACACCATAGTACACAAATCacat
caataaaaaataaaattttcttatctCGACCGTCctcacacaaaaatatt
ttgatcaacaCACTTTTGTTGTAGAACAGCTGTATAAGAACATGCtgaca
aaaaatctcaaaaatgacaACGATAATTTTGAAGTTAGAACAGTTTTGAG
AACATCTCCCAATTTGGACAAAATTTTGAAGCAATTATCAATGAAAACAT
CAATGATAATTTGTTGGCCTAACTAAGTGACTAAATACTAAAATGCACTA
AAATTCATTCTAAAAGGGGAACAATTTGAtgctgaaaatttttgaaattg
ataaaatttcttatgaaaaaaagtgtacaagctAAGCACAAAAAGCTGAC
GAATCATAAACTAAATGTTCATTTATATTTTCTATTGTCTCTCTCTCAAA
GTGAGGGcgaataaaaacatttcttATCTGCTTAGATCCTTTCCAGAGAT
AAAACATGGNCCATTTATATTTTCTATTGTCTCTCTCAAAGTGAGGGcga
ataaaaacatttcttATCTGCTTAGATCCTTTCCAGAGATCAAACATGGA
CAcatatttttatacaaaacttCAGTCACTTCAACTATCaacatcatcaa
aatctataatgatattaaaaaaatgagaaatatgtTACAAAAATAAACGA
AAAGGTCATCATATACTGAAGGGTTAACGACCCCTTACGacatttttttg
atattttgatagCCGTGGGCAGACAAACCTTACATAAAATCTCATCAATT
TTTAGCTAAACATTTTAAGCTTTTGACATTTTACATGGAAAGTTTTCAGA
CTTTATTTAGTTGAGTCCTCTCAACATTTACTTTAGTTTGAATCTTTGAA
TTAACATGTTGAATTAATAAAAGCCCTGCCCAGTTTTGAATCATTTTAGG
TCAGCTGAGAGCACTGGTTTAACAAGACGATTCATTttccttaaaggttt
tattttagtgttcctgtttcatatcagacacatatttcataagcaaaaaa
tgtttttcttttcatcttaatgaccaatcttgctccacataagcagtctg
tgccactaactcaatcgggaagattcttccgaaatgggaagaaccttccc
gaacgggaagaacctactctaatttttttctgcctgtttgggaagattct
tcctctttgggaagttgaaaattgattGAATCTTCGGCGAAGCTGTATGA
TGACCGGCGAAAATTGATACTTTTTGGAGGTgaaaaagcatcaaatttta
aggtttttcaccgAAAGAGAAGCAAACTTTACcgtagaaatcttgttaaa
ttgtgaaaaaactgtGTAAACATCCCAAAGAGGAAGTTCCAACCCGATCg
agatttctttattttcccGCTTCTTCCCGACCTGGAAGTCCGTTTTTTAA
CTTTTACCCGTTTGGGTGTCAAGTTAATTTCCGgttcgggaaggttcttc
ccatttcggaagaaccttcccatttcggaagaatcttcccatttcggaag
aatcttcccgattgagttagtggcacagactgatAAGTGTCAATCTAAta
ttatcactcttatttaaaaacaaaacctttaagaatgcATAAAGttcttg
aatatttttgttctgatacacgttttttcaataagaacatccaaatttct
cgaagccttaggatgttcttaattttttgggttttaagtcttaaaatgtt
cttaccttgttcttaatattttgaccatcgaagccttatgttagttatta
tattgtttgttctcatacacgctttttttttataagaatacactttataa
gaatgtccatgatgaaaatgggcaaaaaattaagaatatggtaagaatat
caccatcattgaatttagcaactgaacctaagaatgtcatNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNcaatcttaacctaagaataccgt
aagaatatttttggatgatttttgccaaaaagttaagaatatccatgatg
aaatgaaaaaacaccattcttataaaaaaaaagaagcgtgtatcAAGAAC
GTGTATTTTAGAAGCTAGATCGTTGtaataaaatagccagaaaattaatt
attattcaaaaaacatttcaacaaatatttttcagcataagcttttcgtt
ttattaaaaaacatcatcagtgcATATACAAGTTAGATCGACATccctaa
agtctgttcacgataagtgtgcactcttttttcttttacctataactttt
gaaggaattcttcaatcttcataaatttggtatcgttggagagatattNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNagaaaatctttttagaaagagGAAAGAGGAAAGTTTTCATTCAAAT
GATAGCACGTTCATCTTTACATACATACGACGGTACCCCTTTTGTATCCT
GGTTTTAGTGGAGTTTTAGTagactcactttttaaaaaatatatgtattg
aaattttgttaagttttatttttttatctcaaTATGGTGTTTTTCAAAAT
ACCGTTGGGGTGAACGGTCAGGGAAAAAGACCCAATATTCTGCTCTGGTC
AGGGAAAAAGGCACCTTGGTCAATCTAAAAGTCATGGAAAAgggcctttt
tttggaaaaagtcagggaaaaatatttctcttaAGTGCTGGGAACCCtgt
tataactttgtttgatatcttttgactgaattattattttttagaatttt
tttcacagtgatgacattcgatgatcaaggattcacttaaGTGAAAATGA
tggttatagcacttttctacaagatcttcatttttttcttcttcattttc
atcttcatttttagaattttttagaagactttttgattttaaattgttct
actcacaaatatctctccaacgataccaaatttatgaagattgaagaatt
ccttcaaaagttataggtaaaagaaaaaagagtgcactaTCGTGAATAGA
CTATAAATTATTATCGAACAATCACTAGTAACAAATTCATATATCCTTTG
TCATTATATTCAAGAATCTTTATTTTCTCAACTAATCTCCAAGACTAAGC
TTATAGactgtcaaaaaggtgtttagtACTTTACAACAATGACTTTATTC
TACTGAAATTCTCTGATTTGTTCAACTGATTTCCTGTCACTTCAGCCAAA
TGTGATTTACTAAAATTGATTGATCTTTTCCGTTTTGATTGTCTATTTTC
TGATCTATTGGCAGTCAAAGGAAACAATTCAAATTGTCTGGCAATTTGAA
TCGAAGTTTGAGACATTGAGTGAAAATTCCTTTaccaaatgttttgaaat
gatTTCAAGTAAACCCCCCTTAAATCTTTATATACCCCTTTCTCGAAAAT
ACTGTAAAAGTTTTTAGCTAAAATGAAGGTACGTATTGGGTTTTTGCTCG
ACTGaagtaaattttatatttttttcaagctACACTTTTTTCTTGTCGTT
GTCTACTAGTAATGTTTCCCTGTGTCTTAACATCATTCTGATATCCAATT
AAAACTACCATGGTTTCCCAAgcacatgttttttttcttaaagatagATT
CTAGTTGTCTTGTCGCTTGACTTTTAGCTCTTTCAATTAATTCGAATTAA
TTTGTCgcttttcaaaatcaattattCTGGTATTTTCTTTATCTATAAGG
ATAAGGAACCAATTACATTATCTTAAATTCTTACCGTATTTGAAAACCCT
TATAAAGTGGTTTCTAGATAATCCGCCACCTTCCTTGTTAGCTGTAAAGT
TGTTTTGACGCACATATAACGTTTATTGGCGCTATTTGGCAGTTGCATGT
CAGTTGAGATACCCTGAAATTTGTTTCCCCACTACAATCTCCTCAAGCCC
TGCAATTCTCTTTCTTTTTTCCGCATCCacactttcatttttttaatgcA
TCTCTAAATAGTTTTATTTCTCTCTTTTTACAACAACAGAACTTGCAGCA
AAGTTACCAGCTAAGAAATTACGAGCGTTTAAAAAAGGACTGACAGAAGA
TCAGATAGACAACGAAGATGATAATGATTCTTGTGATTCTGGCTATTCTG
GATCCAGTGAAATTGCAACCGATAACAAAATGGCGGAAGTCACTGCGGAA
ACGGGTAAACGATTCGAATGTTTAGTATGTGGGAAATTCTTTAAACGACG
TTCATCGCTTTCAACACATAAACTTATACATTTGAACGTCAAACCATTCA
CGTGTACTGTGTGTGATAAAGAGTTTTTACGGAGATCAGACTTAAAGAAA
CATTCGTTAATGCATACAGGAAAGAAACCTCATGAATGTCCTGATTGTGG
TAAGGTATTTTCACAATCTTCAAATATGTTAACACATATGAGGCGGCATA
CGGGCGTCCGCCCCTATTCGTGTAATATATGTGGACACGCGTTTTACAGG
AAAGTTGATGTCCGTCGACATCAGTCAagacattttaaagaaaataatac
gTTAAAGTTACATACAATCACTAATAAAGTCAATATTTCACCACCGCCAT
CAGCTACCGCCACGATTGCGCCCATGCCTTTTATACCGCCAAGGCTACAA
GGTGTAGCGCAACAACAAATAAAAATGTAAACTTTACGGACCAAACACAA
TATTGTTTTTTTACAACGGATGGTGcgtattttttggattttttttcttt
tagtacATCTCTTTTTGAGTTTAATATTTGGAGTTATTTTAGTAATGTAT
TATATTTGATATTAAGAAAAAAGTCAATACAAgcaatttatctttttttc
tgcTAGAAACGATTTTTGTACATATATACCGACGAAACAACGTagaaacg
aattttttttgtgcatttttaTTGTAATAAGAAGAAAACGTAGTAAGATT
ATATACTCGTACTTCAATTAAAAATTATCTTCTTG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00027891-exon-sc0000653-1491911889:49767..49948 | TCONS_00027891-exon-sc0000653-1491911889:49767..49948 | Clytia hemisphaerica | exon |
| TCONS_00027891-exon-sc0000653-1510915933:49767..49948 | TCONS_00027891-exon-sc0000653-1510915933:49767..49948 | Clytia hemisphaerica | exon |
| TCONS_00027891-exon-sc0000653-1575043694:49767..49948 | TCONS_00027891-exon-sc0000653-1575043694:49767..49948 | Clytia hemisphaerica | exon |
| TCONS_00027891-exon-sc0000653-1491911889:50796..51562 | TCONS_00027891-exon-sc0000653-1491911889:50796..51562 | Clytia hemisphaerica | exon |
| TCONS_00027891-exon-sc0000653-1510915933:50796..51562 | TCONS_00027891-exon-sc0000653-1510915933:50796..51562 | Clytia hemisphaerica | exon |
| TCONS_00027891-exon-sc0000653-1575043694:50796..51562 | TCONS_00027891-exon-sc0000653-1575043694:50796..51562 | Clytia hemisphaerica | exon |
| TCONS_00027891-exon-sc0000653-1491911889:58006..58951 | TCONS_00027891-exon-sc0000653-1491911889:58006..58951 | Clytia hemisphaerica | exon |
| TCONS_00027891-exon-sc0000653-1510915933:58006..58951 | TCONS_00027891-exon-sc0000653-1510915933:58006..58951 | Clytia hemisphaerica | exon |
| TCONS_00027891-exon-sc0000653-1575043694:58006..58951 | TCONS_00027891-exon-sc0000653-1575043694:58006..58951 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000653 | supercontig | sc0000653:49767..58951 + |
Blast
BLAST of TCONS_00027891 vs. Swiss-Prot (Human)
Match: GFI1 (Zinc finger protein Gfi-1 OS=Homo sapiens GN=GFI1 PE=1 SV=2) HSP 1 Score: 143.665 bits (361), Expect = 4.641e-37 Identity = 60/106 (56.60%), Postives = 83/106 (78.30%), Query Frame = 1
Query: 1117 KRFECLVCGKFFKRRSSLSTHKLIHLNVKPFTCTVCDKEFLRRSDLKKHSLMHTGKKPHECPDCGKVFSQSSNMLTHMRRHTGVRPYSCNICGHAFYRKVDVRRHQ 1434
+ F+C +CGK FKR S+LSTH LIH + +P+ C C K F ++SD+KKH+ +HTG+KPH+C CGK FSQSSN++TH R+HTG +P+ C++CG F RKVD+RRH+
Sbjct: 310 RSFDCKICGKSFKRSSTLSTHLLIHSDTRPYPCQYCGKRFHQKSDMKKHTFIHTGEKPHKCQVCGKAFSQSSNLITHSRKHTGFKPFGCDLCGKGFQRKVDLRRHR 415 HSP 2 Score: 89.3521 bits (220), Expect = 6.898e-19 Identity = 43/109 (39.45%), Postives = 60/109 (55.05%), Query Frame = 1
Query: 1117 KRFECLVCGKFFKRRSSLSTHKLIHLNVKPFTCTVCDKEFLRRSDLKKHSLMHTGKKPHECPDCGKVFSQSSNMLTHMRRHTGVRPYSCNICGHAFYRKVDVRRHQSRH 1443
+ F C +CGK F SL HK +H + F C +C K F R S L H L+H+ +P+ C CGK F Q S+M H HTG +P+ C +CG AF + ++ H +H
Sbjct: 282 RPFACEMCGKTFGHAVSLEQHKAVHSQERSFDCKICGKSFKRSSTLSTHLLIHSDTRPYPCQYCGKRFHQKSDMKKHTFIHTGEKPHKCQVCGKAFSQSSNLITHSRKH 390
The following BLAST results are available for this feature:
|
