TCONS_00027843 (transcript) - C. hemisphaerica

Overview
NameTCONS_00027843
Unique NameTCONS_00027843
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1661

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00027843 ID=TCONS_00027843|Name=TCONS_00027843|organism=Clytia hemisphaerica|type=transcript|length=1661bp
AACCTTATCTTGTATTTGCCAGGCAATTAGCAGACAAATTGCTGGCTGAC
ATAACTTAAAAAGTGCCGGCAAAAAACAGAACTTTTTTACTTTGATGGCA
GCTAATTACCAGATTTTTTCTTTGCAGATTGCCCGCAAAATTCTCCCCTT
CGGCCAaatcattttctaaaaaacacAAATGCTGCTTGACAACTGTCGTC
TGGCTTAATGCTGTAAATGATAGATTGCCAGACTCTTAAACCTTCTAACC
TTAAACACCATTTGATATATGTTTAATGTGATTCTTTTCAAGGTACCCTG
TTCTGCaccattgaaaaaagaaatcaaagatatTCCTTTGTCATCCAAAG
TTTCTACagataaagaaaatgataaaaaGAGTTGGAGTTTAAAAGACTTT
GATGTTGGCAAACCACTTGGAAAAGGAAAATTTGGCAGTGTATATTTAGC
CCGAGAAAAAAGAAGTCATTTCATAGTAGCATTAAAGGTTTTATTCAAAT
CTCAATTGTTGAAATCTTGCGTGGAACATCAATTACGACGAGAAATAGAA
ATCCAATCTCACTTGAAACATCCTAATATTTTACGATTGTATGGTTATTT
CTATGACGAAAAACGAGTATTTCTTATTCTGGAATATGCACCACAAGGTG
AACTGTACAAAAAGTTAACGAAAGAAGAACGGTTTGGGCAAAGCAAAGCT
GCTACAtataTTGCACAATTGGCCGATGCTTTAGAGTATTGTCATTCCAA
GAAAGTCATTCATCGAGATATTAAACCAGAAAATTTACTGCTTGGAATGA
ACggTGAATTAAAGATTTCTGATTTCGGATGGTCTGTACATGCGCCGTCA
TCAAGGCGGACGACCTTATGTGGAACTCTCGACTATTTACCACCAGAGAT
GATCGATGGGAAAATGCATGACGAGAAGGTCGACCTTTGGAGTATTGGTG
TGTTATGCTACGAGTTTTTGGTCGGCAAACCTCCATTCGAAACCGAAAGC
CACGAGGAAACATACAAGCTCATTTCCTTGgtGAAATTCGATTACCCTTC
GTACGTCTCAGCAGGTGCTAGAGATTTAATTAATAAGCTTCTGAAAAAGA
AACCTGAAGATCGGTTGGCATTGAAAGAAGTTCTGAAACATCCCTGGATT
CTGGAGAACGCGAAACTGAACAAGAAATCAGCTCCTATCAGCAATGTCAA
TCCGCGTGGATCATCCAGCGCTTCCTCTTCCAGCAAGTAAAAAAGACTAT
TGGTTAATTTCATTTTGAGGAAAAGATTGATTGTCCACTGTCATTTACGG
TACTTAATGAGTAGGCTCTCGAACACGGTCTCTCTGGATAGAAGAAGGAC
TTGCTATTAATACAAGCAATTTTACTGTAtcttttcaaattgttttgaat
GGGACTTCTCAGGATGAAACGATGGGAAGAATTTTGGTGGTCGTAGTGAA
TAAAACAATCACTGTAAATACATCATTGTACTGTGgatttcgaaaataaa
tatttgttatacattttgatgaaagaaaaacatttcaattaTTACTATTA
TTGATTTTGTTACATATTGTCAACAGCTgacaataacttttttttatttt
acttgtaCATATTATTTTATTGAAATGTAAGAAGATGTCTTACTCTTTTA
CTATTCATCGC
Run BLAST on NCBI

protein sequence of TCONS_00027843-protein

>TCONS_00027843-protein ID=TCONS_00027843-protein|Name=TCONS_00027843-protein|organism=Clytia hemisphaerica|type=polypeptide|length=323bp
MFNVILFKVPCSAPLKKEIKDIPLSSKVSTDKENDKKSWSLKDFDVGKPL
GKGKFGSVYLAREKRSHFIVALKVLFKSQLLKSCVEHQLRREIEIQSHLK
HPNILRLYGYFYDEKRVFLILEYAPQGELYKKLTKEERFGQSKAATYIAQ
LADALEYCHSKKVIHRDIKPENLLLGMNGELKISDFGWSVHAPSSRRTTL
CGTLDYLPPEMIDGKMHDEKVDLWSIGVLCYEFLVGKPPFETESHEETYK
LISLVKFDYPSYVSAGARDLINKLLKKKPEDRLALKEVLKHPWILENAKL
NKKSAPISNVNPRGSSSASSSSK
Run BLAST on NCBI

transcript from alignment at sc0000647:236060..245207-

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00027843 ID=TCONS_00027843|Name=TCONS_00027843|organism=Clytia hemisphaerica|type=transcript|length=9148bp|location=Sequence derived from alignment at sc0000647:236060..245207- (Clytia hemisphaerica)
AACCTTATCTTGTATTTGCCAGGCAATTAGCAGACAAATTGCTGGCTGAC
ATAACTTAAAAAGTGCCGGCAAAAAACAGAACTTTTTTACTTTGATGGCA
GCTAATTACCAGATTTTTTCTTTGCAGATTGCCCGCAAAATTCTCCCCTT
CGGCCAAATCATTTTCTAAAAAACACAAATGCTGCTTGACAACTGTCGTC
TGGCTTAATGCTGTAAATGATAGATTGCCAGACTCTTAAACCTTCTAACC
TTAAACACCATTTGATATATGTTTAATGTGATTCTTTTCAAGGTACCCTG
TTCTGCACCATTGAAAAAAGAAATCAAAGATATTCCTTTGTCATCCAAAG
TTTCTACAGATAAAGAAAATGATAAAAAGTAAGTGTGATGAACCGTGGAA
AATTTGAAATATCTGGCCATTTTTCTCATTATTGTTACTTTTAAATTAGT
GCTAAAGTAAAATCTCTTGCATAGAAAATAGGCAACTCATTTTCTATCCA
AAACATGTGACCTGCATGATTTCACACAAACACAGAGCCTGAACCGTCAA
AAAAAATCTCCCAAAAATCTATTTCCAGATTTTCTTTAAATGTGTCACAT
GAAAACAACTGAAGTAATAAGTTCGATCTGCCGTTCCAAATACAGCACAC
ATCTTATTTTTTAAGGCCTCACTTTATTTGCTTATGGAAAATGTTCAAAT
GTTCAGCTGTTTCATAAAGTTTGCCAAATAAGAATTTTTTTCAAATCATC
AAAACATTTCATGTCATCCCCAGCACACATTAGACCTGTATCAGCATGTA
TCATGATGCTTTTTGTACCTTAGGAGTTGGAGTTTAAAAGACTTTGATGT
TGGCAAACCACTTGGAAAAGGTTAGTTTTCGCTGCTTTTTTTCCTCAAAC
AGACATGACATCCTAAAAGTGGTTGCTGTATTCTGTACATAAAATGAAAT
AATAAACTGATTCAGGATTATTATTTTTTATGCCATAATTATACTCTAGT
TTTAGGGGGCCAACCCTTAGGTCATCTGTGTCATCTTTTGTGGGATGTAA
CCCCATTTGATTGTTTGAAAGTAGATAGGATCATGGTTTTTGCCCCCCCC
CCTTAAAATAAGGGGGGAGCAAAAAAATTGCCTTTAAAAAAAGGGGGGGG
GGGGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNGGATTTTTGTAATTTTTTTAAAATA
AGGGGGGATTCTTTATCAAGGGCTGCAAGAATCTATTAAAACAAGAAAAA
AGGGGGGACTAAAATTTGAAAATTGCTGATTGAATTTCAGATGTCATGTC
TTTCGTTTTATTGATAATAATTTTCTTTATATCTAATACTAATAATATCT
TCTTTCCCGTTTTCGTGCTCACAATTTCATGCCCACTTTTTTGCAGACCA
TGCTATATTGAAACTTATGTACATTAGAACAACTTTTAACAGACCAAATA
AAACCATTGAAAAAACTNAAAACCAACGAATCTCTTCGGTTTTTGAGGTG
CACGCATTAACTTTTGGACTGATTATGGCCCATTGAAAGGTAAATCTTAA
TTTTTTTTCACCTTCATAGTTTCAACGACCTTTGGAATGTTACATTAGTA
CTTTTTCTTTGTGTTGACTTTTTTGTATTAAATTGGATTTCATCTCACAA
AACAAATGTATTTTTCTCGGCCATGTGTTTCATGGATATCATATGGCCAT
GTTTTCTTTCCACAGGCTTATTTTTATTCATATGGGTCATGTGTTTATTC
CATTTTACTCTAACTATAATTATTTTCATCTCTTCTGTCTTCAGGGTTCA
GGTGAAGGAGCTTGATTGATGTGATGNNNNNNNNNNNNNNNNNATTCATA
TGGGTCGTGTGTTTATTCCATTTTACTCTAACTATAATTATTTTCATCTC
TTCTGTCTTCAGGGTTCAGGTGAAGGAGCTTGATTGATGTGATGCGATCG
GCCGACGACTGGCTGAATCAGCAGTGTTTCAGAGTTTTGGTGGGTGAACG
TGCACAACAAAGAAGCAGCATAAAACCAAATTATACATAGCATTATGACT
GTTGACTGTGTATGAACAGATTGTGATTGATGGAGAATAATAAAATGGTA
CTGCTGAATATAAATTAGTGCCAGTTCCATGTTATTCCGTGCAATGTTTA
CGAGACAAAAGAGAAGACTGTACTGGAAAGCAGAATCAAAATGATAATTA
CTAGTTGCTATTTTCGTCATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNAAAAAAGTGTTTTTTACTGGCGAATCAACTTATATTTTCATA
AACTCTTTGACGTGAGATTGTAGATAACGCTTGTTATTATTACCGCCTAA
TAAATAGTAATAGCATTGCTTTAATATACTTATATGAATTATAGAAGTTT
TCCAATTTTATTTTGTAAGGCAAGGTTCTTGAAAAAATTAGTTTGGACTG
GTTTGGATTGATTTTATAAAATTGTTTTTGAATTGCACAAAACCCGGCGT
ATTTAATTTTTGAGCCTCGTATTGTTCTTATAAAATTCTTATAAAAAAGA
GTTGAGTTGGAAAACATTATCAATAAAAGTTTGACTTATGAAAATAATTT
GTTAGTGTCGAAATTTCTTCGCTTTGCGAAAACGGAACGGTCGTTCCGCA
ACCCCTTTTATGTTGATTCAGTTCTTCAGTTCTTCAGTGCAGACTGCTGT
TTTTTGTTGTTTTTACATTTACCTCCTGTTACTGTTTATCTGTCAAATTG
CTTGCTGAAAGACTATTCTTTACAATTTTCATGTTCCTGACTTCTCCACC
TACCCTCCCACCTTTTTTCCCTAATTAGATAATGTTTTAAGGTGTTTTGA
GGGTGTAAAAAGTAAAAAAAATTCTTCGTCGCCCAACCTTGGTGGACGAC
ATTTTTCCAAAATCTTACCCCCCCCCCCCNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNACA
TCAATGATCTTTGACATTTGCAGCAGAGACTTATTTTTACAAGTTCTGTC
ACATCCAAAATCAATGTCATAAGCATGAAATCTTACTTGTGTTTTACTGC
CTAAATTTTCTACTTGGTCTAAGATAATAGCAAAACACAACTGTTATACC
AGATACTGCATCTTTTGATTGGTTTTATTCATAAAAAGTTTTATTTGTAT
CATTTGATTATTGGATCCAGCTTATTTCCAATTTATGATTTCGTTTTATT
TATTGAGTTTTATTTAGTTGGATATCATTAGGTATAATGTTGATGGCATT
GATATCAACCAATCGTTGTACTTCGCTATTGTCAAACTCTAAAGAGAAAA
TCTGAGGGGGGAATCCTTTTTTTTATTTTAAGGGGGGACATTCTAACAAG
GGTTACTGGTAATTTTTGTTTGATTTAAGGGGGGAGTTTTTTTTTACTGC
AAAATTCCATTTTAAGGGGGGACTGTAAAAGTAGGCAGAAACCATGTAGG
ATTTTTTATGAGATGGAGCCTGGGAATAGGCCTAGCAAAAGTTTTTATTG
CCAAAAAACTGAAGTTACAAAAGTCCTAACCCCTAAGATAGGTAAAAAAT
TGACAACTTTAAAAAAATGAGTGATATAACCGGATAGAGCATGAAATTCG
TAGCATTAAGGTCTTTTACTCACAAACTTTTATAATTTCTTCTTCATTAG
GAAAATTTGGCAGTGTATATTTAGCCCGAGAAAAAAGAAGTCATTTCATA
GTAGCATTAAAGGTTTGTTTTACTGAATTCCAACTCAACATTTTTGACTT
TCATACTTGGGGTTAATTGAAATTGTCAATATTGTTCCAACCTAAAAAGT
TTACATTTTCATTTTTACCAGGTGATCAATGGACAATATCATAATTTATT
TTGTACATTTGATTGGAATAGATGTAACATTTAAACCTTTACTTTTGTTT
ATTTGAAGCAAGGTGACCATTTCAATAATATCCTTTTATTCACACGTGTC
TATGTATTTTCATTTATTGTAATTTCAAATTGAGGATTAAATGTCATATG
GCACCAGTTAAAACAGTCAATATTTTTATACTCAGGTTTTATTCAAATCT
CAATTGTTGAAATCTTGCGTGGAACATCAATTACGACGAGAAATAGAAAT
CCAATCTCACTTGAAGTAAGTATTGTTTCAAATCCTCACCCCTTTGTAAA
ATAAAGTTGGTTATCTCAAGAGAATGTTCAATTGGACAGCCTCTATGGGT
GCAATCTAGATGCTCCCAGTTCTCTGGTATCCAGTCAAAAAGTAGCAAGA
CATATGTCTCTTCCCAGGAATGATATAATAATGATTTGCTTGATTCTATG
AAAAAAAATTCTTATCTGAGCGTGGGCTGATGTCCACCCCTTATAAAAGC
TAACAATTAAGAGAATGGAAATGACTAAAAGCTCGACTCTACCATTTAGG
AACAACTGATGAGAAATGAAAATTTTAACTTTATTTAAGGACACTATAGT
GCTTCAAAAAAACAGCCCCTCCCCCCCTGGATCAATAATTAATAGCACCA
CCTGCAAATTACAATTTGGAATTCTCTTATATTTTTTCAACGAATCTTGA
TTTTTTGCTCTCAATTTTAGACATCCTAATATTTTACGATTGTATGGTTA
TTTCTATGACGAAAAACGAGTATTTCTTATTCTGGAATATGCACCACAAG
GTGAACTGTACAAAAAGTTAACGAAAGAAGAACGGTTTGGGCAAAGCAAA
GCTGCTACAGTGAGTGACTTTTTCAATGTTCAGTTTTTTTTTAAAGAAGG
ATTTCTAGGTGTTCTTTTTGATTTGCCGTTACATTTTGTATTTTTCCAAA
GCACGAGTTGATTGACTGCGAAGCAACAACTCAGTTCTCGCTATGAGGTG
AAAAGGGTAGACCCCAACCAAATCAAAATGTGAAGAAATGATGTCTTTAG
AAAACCTCCTATTGATATTTGTTTGTTATGATGATGTTGCTCTCTGCCCA
GAAGAAATGTGTTCTTTTGGGTCTGATTTTCTTTGAAGAAATTAGCGCAA
GGGCCATCTGAACTTACAATGCCTTCATACCAAAGTTCTTATTGTTGTTA
TTTATTCTTTAAAAGGGGGGGGGTCAATTAAGGGTCCATATTTGACCTGG
TATAAATCAGAGATACCTGTTAATCCAATTTAAGAACTTGACTTTCATTG
GTTGGAAAGATCGAAAGTTTTGATATGAGATCGAGGGGGGTCTTAAAAAG
AGTGGTGATGATGTTGCTCTCTGCTCAAAAGAAATGTGTTCTTTTGGGTC
TGATTTTCTTTGAAGAAATTAGCGCAAGGGCCATCTGAACTTACAATGCC
TTCATAACAAAGTTCTTATTGTTGTTATTTGTTTTTTTAAGGGGAGGGGT
TAATTAAGGGTCCATATTTGACCTGGTATAAATCAGAGATACCTGTTAAT
CCAATTTAAGAACTTGACTTTCATTGGTTGGAAAGATAGAAAGTTTTGAT
ATGAGATCGAGGGGGGTCTTTAAAAAAGTGGTGATGTTGCTCTCTGCCCA
GAAGAAATGTGTTCTTTTGGGTCTGATTTCCATTGAAGAAATTAGCGCAA
GGGCCATCTGAACTTACAACAATGTTGGATGTCTCATTACCAGTTGACAG
ACTAATTTATAAGAAAACTTTCATAGGGTTAATAACAGAATTATCACTTT
CTTTTTATTTTTAGTATATTGCACAATTGGCCGATGCTTTAGAGTATTGT
CATTCCAAGAAAGTCATTCATCGAGATATTAAACCAGAAAATTTACTGCT
TGGAATGAACGTAAGATGAAACTTCCTACCTAATATGCGAACCCTTTATC
AAATTCGGTAAAAATAAGCACAATGCTAAGCATACCTCCAAGCTGAAATA
CTAAAAATTTGTGCAGCTTTTCTAAAACGCTGGCCTTCTTAGGGTTACTT
CTAAAGCTGGTTGAGCTTTCATAGACAAAAGATTTCCGATTTTCCAGTAT
GCTTATCAAAAAAGGGTGTACATTCATAAGTTAAACTCCATCGGAGCTCT
TTTTTGATTTTGTAGACTTATNAGTATGCTTATCAAAAAAGGGTGTACAT
TCATAAGTTAAACTCCATCGGAGCTCTTTTTTGATTTTGTAGACTTATAA
TTTACAGCTTACTCTATAACTGCACGGAAATGTCATGGTGTTATCAATTT
AACTTTTTCTTTCTTTTGATAATTGAAACTCTCCCTAAAATATATTGCAA
TGAGAACTTTCAATTCGAACTTGGTTTTACGAATGATAATGACAATCCTT
GCGACAATCTTATCAAAGTAAGAGTTGTGTTGCTGTTTAGACTCTTTGCG
ATAACTGTAAAGTCATTTATTTTTTTAGGGTGAATTAAAGATTTCTGATT
TCGGATGGTCTGTACATGCGCCGTCATCAAGGTATGATATGATTATTGAA
TTTAAATCTAAATGCTAGAAGTTAAGTGTCCTATAAAATAAAACATGTAC
AATTAACATAGCCATCATTTTTCAAAATCTGGCATTTATGATCAACAATC
AATCATGGTTAATCTTTTAATTCGTTAGGCGGACGACCTTATGTGGAACT
CTCGACTATTTACCACCAGAGATGATCGATGGGAAAATGCATGACGAGAA
GGTAATTGCTGTTCTTTATCATACGTGTTGAAATAGTTCACAATAGTTCA
ATGCTATCATAGTCCGTATAAAAAACCATGGTCTGGAAGCTTATTGTTTT
AACTTTTTGTTAGCTTTTTTAATATCAAAAGATAGAAATCGATTTGCTCA
GTTTTTAATCACGTTACCAAGTATTCCTCTTGGGATTGGTTTAAGATTTA
ATCACATGATCAAAAAGTGAGCAAAACAAACTAATTTCTCAACGCAAGTT
CAAATAAGAAACAATGGAAAGAAACAAAAGGCTTCCAGACCGGGGTTTTA
TATACGGACTATGATGCTATCCAATTCATTGTTATCTTTAGGATATCAAC
CCCATGTTGTGAAAATGTTCAGCTCTATTTATTTTATTCCACAATTATTC
CTGCTCTCTAATTATTAGAGTAGGCAAAAAGCGGGCACAAAGTTGGCAAT
TAAAATCAAAGCAAAAGTTTCCCCCTTGGAGCCCCATGTTACTTATTTCA
AAACCGAGTGATTTTTTAAGTATTAACGTAGATATTGGATTTTGTTTTTC
AGGTCGACCTTTGGAGTATTGGTGTGTTATGCTACGAGTTTTTGGTCGGC
AAACCTCCATTCGAAACCGAAAGCCACGAGGAAACATACAAGCTCATTTC
CTTGGTGAGTATAATCATAGTGTGAGCCCCCTTCAAACTTTTTAAAAAAG
CTTTATAGGGTGATAAGACTTTACGAATTAATATATAGGGTATCAGATAA
TATATTTTGTATCACAAGTATCGAGTTTCGTATTGAAATTGATATCATCT
ATCAAAATGGCAAAATAGTATCCCAGTGGCACTTTTTGCACCCTTTTACC
TTAAAGATGCTAAAGTTTCTACAAATTTTAGGGTCATCAACTGCCATTAA
AGTGTCAGCCTAAAAATTTTATAAATAAGGCGATGTGTGAATAGGAGGAT
AAAATATGAAAGGGCAGTTTAGACTCCTCTGTACAGTTATGATGATGGTT
CCTTTCCAGAAAAGGGGCGTGTCTAATAGTTAAAAAAAAAGGTAAGACAC
CACACATTTCAAGTTAAATAGTGTAAAAGAAAATTCTCTTTTCTCTTTTT
TTCTTCAGGTGAAATTCGATTACCCTTCGTACGTCTCAGCAGGTGCTAGA
GATTTAATTAATAAGGTAATTTTGTGCGTTGTTTTCATCCCCTTATATAC
TATTAGTTTTGTCAGGTTTTCCTGTGGATCTTGATCTGGTTGATTGAGCG
TCTTGATTCTTTGCGATGTTTTGTTGCAGTTTTTGTTCTAGTTCGCGTCG
GCATTCGGCTATTGCCGACGTAAATTTGGCTATTGCCTACGTAAAAGTGC
TTACTGTACTATAGAGCCCAGAATTTTTTGCCGACGCAAGTAAATCTGAA
TTAGAAAGGCTATGTTGTCATTGTCGTTGTCATTCAATTACCATATATAA
TTTCTTCTTCTTGACAATTTTCAGCTTCTGAAAAAGAAACCTGAAGATCG
GTTGGCATTGAAAGAAGTTCTGAAACATCCCTGGATTCTGGAGAACGCGA
AACTGAACAAGAAATCAGCTCCTATCAGCAATGTCAATCCGCGTGGATCA
TCCAGCGCTTCCTCTTCCAGCAAGTAAAAAAGACTATTGGTTAATTTCAT
TTTGAGGAAAAGATTGATTGTCCACTGTCATTTACGGTACTTAATGAGTA
GGCTCTCGAACACGGTCTCTCTGGATAGAAGAAGGACTTGCTATTAATAC
AAGCAATTTTACTGTATCTTTTCAAATTGTTTTGAATGGGACTTCTCAGG
ATGAAACGATGGGAAGAATTTTGGTGGTCGTAGTGAATAAAACAATCACT
GTAAATACATCATTGTACTGTGGATTTCGAAAATAAATATTTGTTATACA
TTTTGATGAAAGAAAAACATTTCAATTATTACTATTATTGATTTTGTTAC
ATATTGTCAACAGCTGACAATAACTTTTTTTTATTTTACTTGTACATATT
ATTTTATTGAAATGTAAGAAGATGTCTTACTCTTTTACTATTCATCGC

Coding sequence (CDS) from alignment at sc0000647:236060..245207-

>TCONS_00027843 ID=TCONS_00027843|Name=TCONS_00027843|organism=Clytia hemisphaerica|type=CDS|length=10692bp|location=Sequence derived from alignment at sc0000647:236060..245207- (Clytia hemisphaerica)
CTTCTGAAAAAGAAACCTGAAGATCGGTTGGCATTGAAAGAAGTTCTGAA
ACATCCCTGGATTCTGGAGAACGCGAAACTGAACAAGAAATCAGCTCCTA
TCAGCAATGTCAATCCGCGTGGATCATCCAGCGCTTCCTCTTCCAGCAAG
TAAGTGAAATTCGATTACCCTTCGTACGTCTCAGCAGGTGCTAGAGATTT
AATTAATAAGGTCGACCTTTGGAGTATTGGTGTGTTATGCTACGAGTTTT
TGGTCGGCAAACCTCCATTCGAAACCGAAAGCCACGAGGAAACATACAAG
CTCATTTCCTTGGCGGACGACCTTATGTGGAACTCTCGACTATTTACCAC
CAGAGATGATCGATGGGAAAATGCATGACGAGAAGGGTGAATTAAAGATT
TCTGATTTCGGATGGTCTGTACATGCGCCGTCATCAAGTATATTGCACAA
TTGGCCGATGCTTTAGAGTATTGTCATTCCAAGAAAGTCATTCATCGAGA
TATTAAACCAGAAAATTTACTGCTTGGAATGAACACATCCTAATATTTTA
CGATTGTATGGTTATTTCTATGACGAAAAACGAGTATTTCTTATTCTGGA
ATATGCACCACAAGGTGAACTGTACAAAAAGTTAACGAAAGAAGAACGGT
TTGGGCAAAGCAAAGCTGCTACAGTTTTATTCAAATCTCAATTGTTGAAA
TCTTGCGTGGAACATCAATTACGACGAGAAATAGAAATCCAATCTCACTT
GAAGAAAATTTGGCAGTGTATATTTAGCCCGAGAAAAAAGAAGTCATTTC
ATAGTAGCATTAAAGGAGTTGGAGTTTAAAAGACTTTGATGTTGGCAAAC
CACTTGGAAAAGATGTTTAATGTGATTCTTTTCAAGGTACCCTGTTCTGC
ACCATTGAAAAAAGAAATCAAAGATATTCCTTTGTCATCCAAAGTTTCTA
CAGATAAAGAAAATGATAAAAACTTCTGAAAAAGAAACCTGAAGATCGGT
TGGCATTGAAAGAAGTTCTGAAACATCCCTGGATTCTGGAGAACGCGAAA
CTGAACAAGAAATCAGCTCCTATCAGCAATGTCAATCCGCGTGGATCATC
CAGCGCTTCCTCTTCCAGCAAGTAAGTGAAATTCGATTACCCTTCGTACG
TCTCAGCAGGTGCTAGAGATTTAATTAATAAGGTCGACCTTTGGAGTATT
GGTGTGTTATGCTACGAGTTTTTGGTCGGCAAACCTCCATTCGAAACCGA
AAGCCACGAGGAAACATACAAGCTCATTTCCTTGGCGGACGACCTTATGT
GGAACTCTCGACTATTTACCACCAGAGATGATCGATGGGAAAATGCATGA
CGAGAAGGGTGAATTAAAGATTTCTGATTTCGGATGGTCTGTACATGCGC
CGTCATCAAGTATATTGCACAATTGGCCGATGCTTTAGAGTATTGTCATT
CCAAGAAAGTCATTCATCGAGATATTAAACCAGAAAATTTACTGCTTGGA
ATGAACACATCCTAATATTTTACGATTGTATGGTTATTTCTATGACGAAA
AACGAGTATTTCTTATTCTGGAATATGCACCACAAGGTGAACTGTACAAA
AAGTTAACGAAAGAAGAACGGTTTGGGCAAAGCAAAGCTGCTACAGTTTT
ATTCAAATCTCAATTGTTGAAATCTTGCGTGGAACATCAATTACGACGAG
AAATAGAAATCCAATCTCACTTGAAGAAAATTTGGCAGTGTATATTTAGC
CCGAGAAAAAAGAAGTCATTTCATAGTAGCATTAAAGGAGTTGGAGTTTA
AAAGACTTTGATGTTGGCAAACCACTTGGAAAAGATGTTTAATGTGATTC
TTTTCAAGGTACCCTGTTCTGCACCATTGAAAAAAGAAATCAAAGATATT
CCTTTGTCATCCAAAGTTTCTACAGATAAAGAAAATGATAAAAACTTCTG
AAAAAGAAACCTGAAGATCGGTTGGCATTGAAAGAAGTTCTGAAACATCC
CTGGATTCTGGAGAACGCGAAACTGAACAAGAAATCAGCTCCTATCAGCA
ATGTCAATCCGCGTGGATCATCCAGCGCTTCCTCTTCCAGCAAGTAAGTG
AAATTCGATTACCCTTCGTACGTCTCAGCAGGTGCTAGAGATTTAATTAA
TAAGGTCGACCTTTGGAGTATTGGTGTGTTATGCTACGAGTTTTTGGTCG
GCAAACCTCCATTCGAAACCGAAAGCCACGAGGAAACATACAAGCTCATT
TCCTTGGCGGACGACCTTATGTGGAACTCTCGACTATTTACCACCAGAGA
TGATCGATGGGAAAATGCATGACGAGAAGGGTGAATTAAAGATTTCTGAT
TTCGGATGGTCTGTACATGCGCCGTCATCAAGTATATTGCACAATTGGCC
GATGCTTTAGAGTATTGTCATTCCAAGAAAGTCATTCATCGAGATATTAA
ACCAGAAAATTTACTGCTTGGAATGAACACATCCTAATATTTTACGATTG
TATGGTTATTTCTATGACGAAAAACGAGTATTTCTTATTCTGGAATATGC
ACCACAAGGTGAACTGTACAAAAAGTTAACGAAAGAAGAACGGTTTGGGC
AAAGCAAAGCTGCTACAGTTTTATTCAAATCTCAATTGTTGAAATCTTGC
GTGGAACATCAATTACGACGAGAAATAGAAATCCAATCTCACTTGAAGAA
AATTTGGCAGTGTATATTTAGCCCGAGAAAAAAGAAGTCATTTCATAGTA
GCATTAAAGGAGTTGGAGTTTAAAAGACTTTGATGTTGGCAAACCACTTG
GAAAAGATGTTTAATGTGATTCTTTTCAAGGTACCCTGTTCTGCACCATT
GAAAAAAGAAATCAAAGATATTCCTTTGTCATCCAAAGTTTCTACAGATA
AAGAAAATGATAAAAACTTCTGAAAAAGAAACCTGAAGATCGGTTGGCAT
TGAAAGAAGTTCTGAAACATCCCTGGATTCTGGAGAACGCGAAACTGAAC
AAGAAATCAGCTCCTATCAGCAATGTCAATCCGCGTGGATCATCCAGCGC
TTCCTCTTCCAGCAAGTAAGTGAAATTCGATTACCCTTCGTACGTCTCAG
CAGGTGCTAGAGATTTAATTAATAAGGTCGACCTTTGGAGTATTGGTGTG
TTATGCTACGAGTTTTTGGTCGGCAAACCTCCATTCGAAACCGAAAGCCA
CGAGGAAACATACAAGCTCATTTCCTTGGCGGACGACCTTATGTGGAACT
CTCGACTATTTACCACCAGAGATGATCGATGGGAAAATGCATGACGAGAA
GGGTGAATTAAAGATTTCTGATTTCGGATGGTCTGTACATGCGCCGTCAT
CAAGTATATTGCACAATTGGCCGATGCTTTAGAGTATTGTCATTCCAAGA
AAGTCATTCATCGAGATATTAAACCAGAAAATTTACTGCTTGGAATGAAC
ACATCCTAATATTTTACGATTGTATGGTTATTTCTATGACGAAAAACGAG
TATTTCTTATTCTGGAATATGCACCACAAGGTGAACTGTACAAAAAGTTA
ACGAAAGAAGAACGGTTTGGGCAAAGCAAAGCTGCTACAGTTTTATTCAA
ATCTCAATTGTTGAAATCTTGCGTGGAACATCAATTACGACGAGAAATAG
AAATCCAATCTCACTTGAAGAAAATTTGGCAGTGTATATTTAGCCCGAGA
AAAAAGAAGTCATTTCATAGTAGCATTAAAGGAGTTGGAGTTTAAAAGAC
TTTGATGTTGGCAAACCACTTGGAAAAGATGTTTAATGTGATTCTTTTCA
AGGTACCCTGTTCTGCACCATTGAAAAAAGAAATCAAAGATATTCCTTTG
TCATCCAAAGTTTCTACAGATAAAGAAAATGATAAAAACTTCTGAAAAAG
AAACCTGAAGATCGGTTGGCATTGAAAGAAGTTCTGAAACATCCCTGGAT
TCTGGAGAACGCGAAACTGAACAAGAAATCAGCTCCTATCAGCAATGTCA
ATCCGCGTGGATCATCCAGCGCTTCCTCTTCCAGCAAGTAAGTGAAATTC
GATTACCCTTCGTACGTCTCAGCAGGTGCTAGAGATTTAATTAATAAGGT
CGACCTTTGGAGTATTGGTGTGTTATGCTACGAGTTTTTGGTCGGCAAAC
CTCCATTCGAAACCGAAAGCCACGAGGAAACATACAAGCTCATTTCCTTG
GCGGACGACCTTATGTGGAACTCTCGACTATTTACCACCAGAGATGATCG
ATGGGAAAATGCATGACGAGAAGGGTGAATTAAAGATTTCTGATTTCGGA
TGGTCTGTACATGCGCCGTCATCAAGTATATTGCACAATTGGCCGATGCT
TTAGAGTATTGTCATTCCAAGAAAGTCATTCATCGAGATATTAAACCAGA
AAATTTACTGCTTGGAATGAACACATCCTAATATTTTACGATTGTATGGT
TATTTCTATGACGAAAAACGAGTATTTCTTATTCTGGAATATGCACCACA
AGGTGAACTGTACAAAAAGTTAACGAAAGAAGAACGGTTTGGGCAAAGCA
AAGCTGCTACAGTTTTATTCAAATCTCAATTGTTGAAATCTTGCGTGGAA
CATCAATTACGACGAGAAATAGAAATCCAATCTCACTTGAAGAAAATTTG
GCAGTGTATATTTAGCCCGAGAAAAAAGAAGTCATTTCATAGTAGCATTA
AAGGAGTTGGAGTTTAAAAGACTTTGATGTTGGCAAACCACTTGGAAAAG
ATGTTTAATGTGATTCTTTTCAAGGTACCCTGTTCTGCACCATTGAAAAA
AGAAATCAAAGATATTCCTTTGTCATCCAAAGTTTCTACAGATAAAGAAA
ATGATAAAAACTTCTGAAAAAGAAACCTGAAGATCGGTTGGCATTGAAAG
AAGTTCTGAAACATCCCTGGATTCTGGAGAACGCGAAACTGAACAAGAAA
TCAGCTCCTATCAGCAATGTCAATCCGCGTGGATCATCCAGCGCTTCCTC
TTCCAGCAAGTAAGTGAAATTCGATTACCCTTCGTACGTCTCAGCAGGTG
CTAGAGATTTAATTAATAAGGTCGACCTTTGGAGTATTGGTGTGTTATGC
TACGAGTTTTTGGTCGGCAAACCTCCATTCGAAACCGAAAGCCACGAGGA
AACATACAAGCTCATTTCCTTGGCGGACGACCTTATGTGGAACTCTCGAC
TATTTACCACCAGAGATGATCGATGGGAAAATGCATGACGAGAAGGGTGA
ATTAAAGATTTCTGATTTCGGATGGTCTGTACATGCGCCGTCATCAAGTA
TATTGCACAATTGGCCGATGCTTTAGAGTATTGTCATTCCAAGAAAGTCA
TTCATCGAGATATTAAACCAGAAAATTTACTGCTTGGAATGAACACATCC
TAATATTTTACGATTGTATGGTTATTTCTATGACGAAAAACGAGTATTTC
TTATTCTGGAATATGCACCACAAGGTGAACTGTACAAAAAGTTAACGAAA
GAAGAACGGTTTGGGCAAAGCAAAGCTGCTACAGTTTTATTCAAATCTCA
ATTGTTGAAATCTTGCGTGGAACATCAATTACGACGAGAAATAGAAATCC
AATCTCACTTGAAGAAAATTTGGCAGTGTATATTTAGCCCGAGAAAAAAG
AAGTCATTTCATAGTAGCATTAAAGGAGTTGGAGTTTAAAAGACTTTGAT
GTTGGCAAACCACTTGGAAAAGATGTTTAATGTGATTCTTTTCAAGGTAC
CCTGTTCTGCACCATTGAAAAAAGAAATCAAAGATATTCCTTTGTCATCC
AAAGTTTCTACAGATAAAGAAAATGATAAAAACTTCTGAAAAAGAAACCT
GAAGATCGGTTGGCATTGAAAGAAGTTCTGAAACATCCCTGGATTCTGGA
GAACGCGAAACTGAACAAGAAATCAGCTCCTATCAGCAATGTCAATCCGC
GTGGATCATCCAGCGCTTCCTCTTCCAGCAAGTAAGTGAAATTCGATTAC
CCTTCGTACGTCTCAGCAGGTGCTAGAGATTTAATTAATAAGGTCGACCT
TTGGAGTATTGGTGTGTTATGCTACGAGTTTTTGGTCGGCAAACCTCCAT
TCGAAACCGAAAGCCACGAGGAAACATACAAGCTCATTTCCTTGGCGGAC
GACCTTATGTGGAACTCTCGACTATTTACCACCAGAGATGATCGATGGGA
AAATGCATGACGAGAAGGGTGAATTAAAGATTTCTGATTTCGGATGGTCT
GTACATGCGCCGTCATCAAGTATATTGCACAATTGGCCGATGCTTTAGAG
TATTGTCATTCCAAGAAAGTCATTCATCGAGATATTAAACCAGAAAATTT
ACTGCTTGGAATGAACACATCCTAATATTTTACGATTGTATGGTTATTTC
TATGACGAAAAACGAGTATTTCTTATTCTGGAATATGCACCACAAGGTGA
ACTGTACAAAAAGTTAACGAAAGAAGAACGGTTTGGGCAAAGCAAAGCTG
CTACAGTTTTATTCAAATCTCAATTGTTGAAATCTTGCGTGGAACATCAA
TTACGACGAGAAATAGAAATCCAATCTCACTTGAAGAAAATTTGGCAGTG
TATATTTAGCCCGAGAAAAAAGAAGTCATTTCATAGTAGCATTAAAGGAG
TTGGAGTTTAAAAGACTTTGATGTTGGCAAACCACTTGGAAAAGATGTTT
AATGTGATTCTTTTCAAGGTACCCTGTTCTGCACCATTGAAAAAAGAAAT
CAAAGATATTCCTTTGTCATCCAAAGTTTCTACAGATAAAGAAAATGATA
AAAACTTCTGAAAAAGAAACCTGAAGATCGGTTGGCATTGAAAGAAGTTC
TGAAACATCCCTGGATTCTGGAGAACGCGAAACTGAACAAGAAATCAGCT
CCTATCAGCAATGTCAATCCGCGTGGATCATCCAGCGCTTCCTCTTCCAG
CAAGTAAGTGAAATTCGATTACCCTTCGTACGTCTCAGCAGGTGCTAGAG
ATTTAATTAATAAGGTCGACCTTTGGAGTATTGGTGTGTTATGCTACGAG
TTTTTGGTCGGCAAACCTCCATTCGAAACCGAAAGCCACGAGGAAACATA
CAAGCTCATTTCCTTGGCGGACGACCTTATGTGGAACTCTCGACTATTTA
CCACCAGAGATGATCGATGGGAAAATGCATGACGAGAAGGGTGAATTAAA
GATTTCTGATTTCGGATGGTCTGTACATGCGCCGTCATCAAGTATATTGC
ACAATTGGCCGATGCTTTAGAGTATTGTCATTCCAAGAAAGTCATTCATC
GAGATATTAAACCAGAAAATTTACTGCTTGGAATGAACACATCCTAATAT
TTTACGATTGTATGGTTATTTCTATGACGAAAAACGAGTATTTCTTATTC
TGGAATATGCACCACAAGGTGAACTGTACAAAAAGTTAACGAAAGAAGAA
CGGTTTGGGCAAAGCAAAGCTGCTACAGTTTTATTCAAATCTCAATTGTT
GAAATCTTGCGTGGAACATCAATTACGACGAGAAATAGAAATCCAATCTC
ACTTGAAGAAAATTTGGCAGTGTATATTTAGCCCGAGAAAAAAGAAGTCA
TTTCATAGTAGCATTAAAGGAGTTGGAGTTTAAAAGACTTTGATGTTGGC
AAACCACTTGGAAAAGATGTTTAATGTGATTCTTTTCAAGGTACCCTGTT
CTGCACCATTGAAAAAAGAAATCAAAGATATTCCTTTGTCATCCAAAGTT
TCTACAGATAAAGAAAATGATAAAAACTTCTGAAAAAGAAACCTGAAGAT
CGGTTGGCATTGAAAGAAGTTCTGAAACATCCCTGGATTCTGGAGAACGC
GAAACTGAACAAGAAATCAGCTCCTATCAGCAATGTCAATCCGCGTGGAT
CATCCAGCGCTTCCTCTTCCAGCAAGTAAGTGAAATTCGATTACCCTTCG
TACGTCTCAGCAGGTGCTAGAGATTTAATTAATAAGGTCGACCTTTGGAG
TATTGGTGTGTTATGCTACGAGTTTTTGGTCGGCAAACCTCCATTCGAAA
CCGAAAGCCACGAGGAAACATACAAGCTCATTTCCTTGGCGGACGACCTT
ATGTGGAACTCTCGACTATTTACCACCAGAGATGATCGATGGGAAAATGC
ATGACGAGAAGGGTGAATTAAAGATTTCTGATTTCGGATGGTCTGTACAT
GCGCCGTCATCAAGTATATTGCACAATTGGCCGATGCTTTAGAGTATTGT
CATTCCAAGAAAGTCATTCATCGAGATATTAAACCAGAAAATTTACTGCT
TGGAATGAACACATCCTAATATTTTACGATTGTATGGTTATTTCTATGAC
GAAAAACGAGTATTTCTTATTCTGGAATATGCACCACAAGGTGAACTGTA
CAAAAAGTTAACGAAAGAAGAACGGTTTGGGCAAAGCAAAGCTGCTACAG
TTTTATTCAAATCTCAATTGTTGAAATCTTGCGTGGAACATCAATTACGA
CGAGAAATAGAAATCCAATCTCACTTGAAGAAAATTTGGCAGTGTATATT
TAGCCCGAGAAAAAAGAAGTCATTTCATAGTAGCATTAAAGGAGTTGGAG
TTTAAAAGACTTTGATGTTGGCAAACCACTTGGAAAAGATGTTTAATGTG
ATTCTTTTCAAGGTACCCTGTTCTGCACCATTGAAAAAAGAAATCAAAGA
TATTCCTTTGTCATCCAAAGTTTCTACAGATAAAGAAAATGATAAAAACT
TCTGAAAAAGAAACCTGAAGATCGGTTGGCATTGAAAGAAGTTCTGAAAC
ATCCCTGGATTCTGGAGAACGCGAAACTGAACAAGAAATCAGCTCCTATC
AGCAATGTCAATCCGCGTGGATCATCCAGCGCTTCCTCTTCCAGCAAGTA
AGTGAAATTCGATTACCCTTCGTACGTCTCAGCAGGTGCTAGAGATTTAA
TTAATAAGGTCGACCTTTGGAGTATTGGTGTGTTATGCTACGAGTTTTTG
GTCGGCAAACCTCCATTCGAAACCGAAAGCCACGAGGAAACATACAAGCT
CATTTCCTTGGCGGACGACCTTATGTGGAACTCTCGACTATTTACCACCA
GAGATGATCGATGGGAAAATGCATGACGAGAAGGGTGAATTAAAGATTTC
TGATTTCGGATGGTCTGTACATGCGCCGTCATCAAGTATATTGCACAATT
GGCCGATGCTTTAGAGTATTGTCATTCCAAGAAAGTCATTCATCGAGATA
TTAAACCAGAAAATTTACTGCTTGGAATGAACACATCCTAATATTTTACG
ATTGTATGGTTATTTCTATGACGAAAAACGAGTATTTCTTATTCTGGAAT
ATGCACCACAAGGTGAACTGTACAAAAAGTTAACGAAAGAAGAACGGTTT
GGGCAAAGCAAAGCTGCTACAGTTTTATTCAAATCTCAATTGTTGAAATC
TTGCGTGGAACATCAATTACGACGAGAAATAGAAATCCAATCTCACTTGA
AGAAAATTTGGCAGTGTATATTTAGCCCGAGAAAAAAGAAGTCATTTCAT
AGTAGCATTAAAGGAGTTGGAGTTTAAAAGACTTTGATGTTGGCAAACCA
CTTGGAAAAGATGTTTAATGTGATTCTTTTCAAGGTACCCTGTTCTGCAC
CATTGAAAAAAGAAATCAAAGATATTCCTTTGTCATCCAAAGTTTCTACA
GATAAAGAAAATGATAAAAACTTCTGAAAAAGAAACCTGAAGATCGGTTG
GCATTGAAAGAAGTTCTGAAACATCCCTGGATTCTGGAGAACGCGAAACT
GAACAAGAAATCAGCTCCTATCAGCAATGTCAATCCGCGTGGATCATCCA
GCGCTTCCTCTTCCAGCAAGTAAGTGAAATTCGATTACCCTTCGTACGTC
TCAGCAGGTGCTAGAGATTTAATTAATAAGGTCGACCTTTGGAGTATTGG
TGTGTTATGCTACGAGTTTTTGGTCGGCAAACCTCCATTCGAAACCGAAA
GCCACGAGGAAACATACAAGCTCATTTCCTTGGCGGACGACCTTATGTGG
AACTCTCGACTATTTACCACCAGAGATGATCGATGGGAAAATGCATGACG
AGAAGGGTGAATTAAAGATTTCTGATTTCGGATGGTCTGTACATGCGCCG
TCATCAAGTATATTGCACAATTGGCCGATGCTTTAGAGTATTGTCATTCC
AAGAAAGTCATTCATCGAGATATTAAACCAGAAAATTTACTGCTTGGAAT
GAACACATCCTAATATTTTACGATTGTATGGTTATTTCTATGACGAAAAA
CGAGTATTTCTTATTCTGGAATATGCACCACAAGGTGAACTGTACAAAAA
GTTAACGAAAGAAGAACGGTTTGGGCAAAGCAAAGCTGCTACAGTTTTAT
TCAAATCTCAATTGTTGAAATCTTGCGTGGAACATCAATTACGACGAGAA
ATAGAAATCCAATCTCACTTGAAGAAAATTTGGCAGTGTATATTTAGCCC
GAGAAAAAAGAAGTCATTTCATAGTAGCATTAAAGGAGTTGGAGTTTAAA
AGACTTTGATGTTGGCAAACCACTTGGAAAAGATGTTTAATGTGATTCTT
TTCAAGGTACCCTGTTCTGCACCATTGAAAAAAGAAATCAAAGATATTCC
TTTGTCATCCAAAGTTTCTACAGATAAAGAAAATGATAAAAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_015732XLOC_015732Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00027843-proteinTCONS_00027843-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00027843-exon-sc0000647-1575043694:244830..245207TCONS_00027843-exon-sc0000647-1575043694:244830..245207Clytia hemisphaericaexon
TCONS_00027843-exon-sc0000647-1575043694:244338..244384TCONS_00027843-exon-sc0000647-1575043694:244338..244384Clytia hemisphaericaexon
TCONS_00027843-exon-sc0000647-1575043694:240996..241057TCONS_00027843-exon-sc0000647-1575043694:240996..241057Clytia hemisphaericaexon
TCONS_00027843-exon-sc0000647-1575043694:240593..240672TCONS_00027843-exon-sc0000647-1575043694:240593..240672Clytia hemisphaericaexon
TCONS_00027843-exon-sc0000647-1575043694:239999..240137TCONS_00027843-exon-sc0000647-1575043694:239999..240137Clytia hemisphaericaexon
TCONS_00027843-exon-sc0000647-1575043694:238948..239043TCONS_00027843-exon-sc0000647-1575043694:238948..239043Clytia hemisphaericaexon
TCONS_00027843-exon-sc0000647-1575043694:238327..238379TCONS_00027843-exon-sc0000647-1575043694:238327..238379Clytia hemisphaericaexon
TCONS_00027843-exon-sc0000647-1575043694:238107..238179TCONS_00027843-exon-sc0000647-1575043694:238107..238179Clytia hemisphaericaexon
TCONS_00027843-exon-sc0000647-1575043694:237454..237555TCONS_00027843-exon-sc0000647-1575043694:237454..237555Clytia hemisphaericaexon
TCONS_00027843-exon-sc0000647-1575043694:236943..236999TCONS_00027843-exon-sc0000647-1575043694:236943..236999Clytia hemisphaericaexon
TCONS_00027843-exon-sc0000647-1575043694:236060..236633TCONS_00027843-exon-sc0000647-1575043694:236060..236633Clytia hemisphaericaexon
TCONS_00027843-exon-sc0000647-1510915933:244830..245207TCONS_00027843-exon-sc0000647-1510915933:244830..245207Clytia hemisphaericaexon
TCONS_00027843-exon-sc0000647-1510915933:244338..244384TCONS_00027843-exon-sc0000647-1510915933:244338..244384Clytia hemisphaericaexon
TCONS_00027843-exon-sc0000647-1510915933:240996..241057TCONS_00027843-exon-sc0000647-1510915933:240996..241057Clytia hemisphaericaexon
TCONS_00027843-exon-sc0000647-1510915933:240593..240672TCONS_00027843-exon-sc0000647-1510915933:240593..240672Clytia hemisphaericaexon
TCONS_00027843-exon-sc0000647-1510915933:239999..240137TCONS_00027843-exon-sc0000647-1510915933:239999..240137Clytia hemisphaericaexon
TCONS_00027843-exon-sc0000647-1510915933:238948..239043TCONS_00027843-exon-sc0000647-1510915933:238948..239043Clytia hemisphaericaexon
TCONS_00027843-exon-sc0000647-1510915933:238327..238379TCONS_00027843-exon-sc0000647-1510915933:238327..238379Clytia hemisphaericaexon
TCONS_00027843-exon-sc0000647-1510915933:238107..238179TCONS_00027843-exon-sc0000647-1510915933:238107..238179Clytia hemisphaericaexon
TCONS_00027843-exon-sc0000647-1510915933:237454..237555TCONS_00027843-exon-sc0000647-1510915933:237454..237555Clytia hemisphaericaexon
TCONS_00027843-exon-sc0000647-1510915933:236943..236999TCONS_00027843-exon-sc0000647-1510915933:236943..236999Clytia hemisphaericaexon
TCONS_00027843-exon-sc0000647-1510915933:236060..236633TCONS_00027843-exon-sc0000647-1510915933:236060..236633Clytia hemisphaericaexon
TCONS_00027843-exon-sc0000647-1491911889:244830..245207TCONS_00027843-exon-sc0000647-1491911889:244830..245207Clytia hemisphaericaexon
TCONS_00027843-exon-sc0000647-1491911889:244338..244384TCONS_00027843-exon-sc0000647-1491911889:244338..244384Clytia hemisphaericaexon
TCONS_00027843-exon-sc0000647-1491911889:240996..241057TCONS_00027843-exon-sc0000647-1491911889:240996..241057Clytia hemisphaericaexon
TCONS_00027843-exon-sc0000647-1491911889:240593..240672TCONS_00027843-exon-sc0000647-1491911889:240593..240672Clytia hemisphaericaexon
TCONS_00027843-exon-sc0000647-1491911889:239999..240137TCONS_00027843-exon-sc0000647-1491911889:239999..240137Clytia hemisphaericaexon
TCONS_00027843-exon-sc0000647-1491911889:238948..239043TCONS_00027843-exon-sc0000647-1491911889:238948..239043Clytia hemisphaericaexon
TCONS_00027843-exon-sc0000647-1491911889:238327..238379TCONS_00027843-exon-sc0000647-1491911889:238327..238379Clytia hemisphaericaexon
TCONS_00027843-exon-sc0000647-1491911889:238107..238179TCONS_00027843-exon-sc0000647-1491911889:238107..238179Clytia hemisphaericaexon
TCONS_00027843-exon-sc0000647-1491911889:237454..237555TCONS_00027843-exon-sc0000647-1491911889:237454..237555Clytia hemisphaericaexon
TCONS_00027843-exon-sc0000647-1491911889:236943..236999TCONS_00027843-exon-sc0000647-1491911889:236943..236999Clytia hemisphaericaexon
TCONS_00027843-exon-sc0000647-1491911889:236060..236633TCONS_00027843-exon-sc0000647-1491911889:236060..236633Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000647supercontigsc0000647:236060..245207 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
87.9238	74.9355	406.82	434.514	403.057	302.889	129.984	132.913	61.1981	75.1168	48.44	35.8865	20.2599	20.6384	38.3036	42.388	81.2045	60.3028	7.89901	8.32321	30.0795	28.7451	46.5621	42.1753	148.329	119.475	16.5299	9.00111	29.5444	29.5705
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR000719Prot_kinase_dom
IPR017441Protein_kinase_ATP_BS
IPR008271Ser/Thr_kinase_AS
IPR011009Kinase-like_dom
Vocabulary: Molecular Function
TermDefinition
GO:0004672protein kinase activity
GO:0005524ATP binding
Vocabulary: Biological Process
TermDefinition
GO:0006468protein phosphorylation
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006468 protein phosphorylation
molecular_function GO:0005524 ATP binding
molecular_function GO:0004672 protein kinase activity
Blast
[Close]
BLAST of TCONS_00027843 vs. Swiss-Prot (Human)
Match: AURKA (Aurora kinase A OS=Homo sapiens GN=AURKA PE=1 SV=2)

HSP 1 Score: 426.402 bits (1095), Expect = 2.280e-144
Identity = 195/280 (69.64%), Postives = 239/280 (85.36%), Query Frame = 2 
Query:  359 DKENDKKSWSLKDFDVGKPLGKGKFGSVYLAREKRSHFIVALKVLFKSQLLKSCVEHQLRREIEIQSHLKHPNILRLYGYFYDEKRVFLILEYAPQGELYKKLTKEERFGQSKAATYIAQLADALEYCHSKKVIHRDIKPENLLLGMNGELKISDFGWSVHAPSSRRTTLCGTLDYLPPEMIDGKMHDEKVDLWSIGVLCYEFLVGKPPFETESHEETYKLISLVKFDYPSYVSAGARDLINKLLKKKPEDRLALKEVLKHPWILENAK-----LNKKSA 1183
            ++E+ K+ W+L+DF++G+PLGKGKFG+VYLAREK+S FI+ALKVLFK+QL K+ VEHQLRRE+EIQSHL+HPNILRLYGYF+D  RV+LILEYAP G +Y++L K  +F + + ATYI +LA+AL YCHSK+VIHRDIKPENLLLG  GELKI+DFGWSVHAPSSRRTTLCGTLDYLPPEMI+G+MHDEKVDLWS+GVLCYEFLVGKPPFE  +++ETYK IS V+F +P +V+ GARDLI++LLK  P  R  L+EVL+HPWI  N+       NK+SA
Sbjct:  120 NEESKKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISRLLKHNPSQRPMLREVLEHPWITANSSKPSNCQNKESA 399
The following BLAST results are available for this feature:
BLAST of TCONS_00027843 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
AURKA2.280e-14469.64Aurora kinase A OS=Homo sapiens GN=AURKA PE=1 SV=2[more]
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