TCONS_00027825 (transcript) - C. hemisphaerica

Overview
NameTCONS_00027825
Unique NameTCONS_00027825
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length3435

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00027825 ID=TCONS_00027825|Name=TCONS_00027825|organism=Clytia hemisphaerica|type=transcript|length=3435bp
AATTATTTTAAGAGGAACAGCGCCTGGTTACTGGATATCTAAAAGgtaaa
atatCATATTGCCAGACATGGTTAATAAGAATCAAACAGATCAAAATATA
GAGAGTCTACATTTACGTAAAAAGAGACAATCATGGATAAACGAAGATCT
GCATCAACTTCGTCACGAGGATGTAACAAAACAGTTAGGAGTTTTGTTTG
GTGAGGATGAAGCTGACCATTTTATGAACCCAAAAGTTCAAGAAGAAtct
aaaagtaaaatcaaaattgtaGAATCAATGCCTAAAGTTTCCTACCAACA
AGGCGCTCACATGTTATGGAACCATCTGAGATCAAACTCTGAGAAAAAAC
TATTACATGAAACTCGCAATATGAAAACTACAGTTGTTCTCCCATTGAAT
AACAAAAAGCAACAACAACGACTGCATCATGTAGAACAATACCGTCAACG
TGTTGAACTGATGCACAAAATAGCTCAATTGAATGCTGATAAGACCAAAC
AGCttctaaaaacaattaaattgcCAGCTATCGCTCCTGAAGATTANTGA
TAAGACAAAACAGCttctaaaaacaattaaattgcCAGCTATCGCTCCTG
AAGATTATTATGTATCTAATTCTGTCAGTACACTTGTGAAAAAGGAAAAG
CCAAAGAAACTGCAATCAACATTAAAAAGGATATCTCCGGACTATAGTAG
AGCAAGTCCAGATCTTTATGCCACACCCATCATTCAAGATCGTCCAATAA
GTTTCCTTACTGAAAAAGACTGTGAAACTCCAGGATCATTTAAAAGAAGA
CTTCAAGAAAATGGTATTATACCCAAGGTGGGTATTTCAAGACCGCAGAT
TTTGTATCGTTCAAACTCTGAAATCAGATCTGAGCCTATAATCCCAAACA
AACGAAACCCAGTATTTATATCCTATAAAAATGAACAGTCTAAATCTTCA
AACCCTAATACAAATAATGTACCTAAAAGTTATACATGGCAACCTTTGAC
TTTGAATGCATTATCAGAATATGCGTGCTCAATACCTGCGCCAGGCTCTG
GTGATTTTCATCATGGTTCTGCAAGAGTGTGGAGACCAACTACTTCAACA
ATACGGACTGGAGATGTTCCAAAAACAAATTCACTTGTTCCAAATACCTC
TTGAAAATAAATTGAGAACGATTTTAGGTCTGCTATTTGTTGATTTAACT
TGTTGTTGATATTTGAGTTGATTGTCAATGGTTTGTGGCAATGGCACGTG
GCTGTTGAAATTGACGATGTAATCATCCACACCATAAAGCTGGTTTTCGA
ACTCTTTCAATATAACACTAACTACCTTATGTTGATATTCGCATATCTAT
GTTATACTAATTGACTCAAAAGAACTTTAGAGGTTTGACAACCTCCtcat
atcaaacaaagttttggCTGAGTTCACGGTTCTTTGAAGAAAGATATAAT
CCATATAATTTTGAGATATAGTTATTTGGTACAACTAAATATTTGAATGG
TACATTCGGACATTACTCCAATAACAGCGATTGAAACTTAAATAGTTATT
TGTGTCATAACAAAAGCACACTCCTTTCTTGtgtaaagctgaaaattaat
ctGAATTAATGGTTATTATCTTAAAAATCAGACTTTCATGGAGGAAAATT
TAATACTTTTAAACTTTGAATGTGTAAAGTAAATTCGACGTAGCCCAAGT
TAGCCAATCACCCTTTCCAGTggcaaaagaaatatttttagttttcccaA
ATTCATGTAGACTCACTGTGAAACATCCAATAACTATAAAACACAACGAA
CTAAACTGCATACTTAAAATTAACGACATGAAAACCAAAGAATTTTGACA
TCAATTAACACTTTGAAATCCTGTGGTTTTTCACTAGTTAGTACAAACAA
GGAAGACAGCTGGTCCGCTACACTGGATACCGTGATCGCACTCACGAAGA
AAGAATCGTTCGTTTTCAAACGGAATGTCGCGAAGGAAGATGTCCAGTGG
CATTCACATCATCTGGGACAAATCTTGTATTATATCTTGGCCCACAACAT
TATAAAGACAAAAAAGAACAGCCTCCTCGTGAGTTTGTCGACTTTGACAA
AGACCCTGGAAAGGTTCACCTGAAGAGTACGTTCGTTATGAATGGAGTAT
GTGTCATTTTCAAAGGGATGATGGACTTGCAACGTTTAGATGGAACTGCT
TACCTTGAACTTGATAATATACAATCGAAAATCGAAGATAAGATCATGCG
AGATACGATCGAACAATCGCGATTACGTTTACAAGAGTTCGAGGAGCGAC
AACGAAGAGTGAAACAAGAACCCATGGAGAACCCAGATGTCGTTGATTAT
CGTTCATGGCAACTCTCTTCCGCTGAGGCACAATATGCGAATCCAGAATA
CAACATGGTATTTAACTGAACATTTCACCAAGAGTTTTCATGACCAAACA
CATTGTAAACCAGATTGGATGAGAGAATGGAGAGTTAGTTTTCTGGTCTG
TGATATTGCTCTCTGACAATTATCGTTGGCTCCCCTTCAACTAAACTGCT
GTAAAGTATGCCTTCTGTTGAGACTATTAACAATTTTGGTTGGACTAAAA
TACACTAATAATACAACAATATTATTAAAGAGCACATGAACACTTTTAGT
GGCATCAAAGCTGGCGAGCGCCAAGGAATTGTATTATCTCATATCCACCT
TAAATGTCTGAAGATTTTGGAAAACAATGGACTTGAATAGATTACTGACT
GTGTTGTGTGGTAGTGCCCCTATAGCCACAAGCATAATAAAAGATCTAAG
GATTGGGTTAGCTTTTTTCTACTgtgcattttttcaaacatttgagTAAA
CGTTCATTTTCTTTTACTCTAAGAAGAGATTTTTTTGAGGCTAAATTCTA
GACTTGTCATTTTATGAAGGTATGTTTATTTAAATGAAATAGAAAAGGAA
TGAAAGCGGGCTGTACCAGTCAGCTATTATATTGTAGAATTTTATtaagg
tgtcaatttttttcatactCTGTAAGAGAACGTTAGGgaacaaaatttta
aagcaGATAAAACATATTTATTTGTATCATAACAGTTTTAAATAAATTAG
GACTATGTATATTTAGGATCAAAcgaatttttttgtcttttttttttagt
tgtTATCTTATGGTTTTTTGTCattaaatataatattttaGTCATTTTAT
ATCGCTGCATTATAACAAACTTCCGACCCTAACCTTACCAACGCCCAAAG
TCTGTTAGTGAATGTCCTAACTACGCATGTGGGAGCCCcccccagtggtt
tgcgtgatggcgtgattgggacttttttcttgcgttatagcgtgattaga
gattttttttggcgtgatggcgtgataaagattttggcgtgatgcgtgat
agggcaaacatttgaggcgtgatgcgtgatttggg
Run BLAST on NCBI

protein sequence of TCONS_00027825-protein

>TCONS_00027825-protein ID=TCONS_00027825-protein|Name=TCONS_00027825-protein|organism=Clytia hemisphaerica|type=polypeptide|length=160bp
MVNKNQTDQNIESLHLRKKRQSWINEDLHQLRHEDVTKQLGVLFGEDEAD
HFMNPKVQEESKSKIKIVESMPKVSYQQGAHMLWNHLRSNSEKKLLHETR
NMKTTVVLPLNNKKQQQRLHHVEQYRQRVELMHKIAQLNADKTKQLLKTI
KLPAIAPEDX
Run BLAST on NCBI

transcript from alignment at sc0000647:89155..106532+

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00027825 ID=TCONS_00027825|Name=TCONS_00027825|organism=Clytia hemisphaerica|type=transcript|length=17378bp|location=Sequence derived from alignment at sc0000647:89155..106532+ (Clytia hemisphaerica)
AATTATTTTAAGAGGAACAGCGCCTGGTTACTGGATATCTAAAAGGTATG
AAAAATTGCTTggcaaacatattttttcacaAAGTATATAAATTAATATA
ATATTTCATGTTGGTATACTCAACACATACTGTACACAACATAAAAGTCA
TTTGTACACAGGTAATTGATAACATTTATCAAATCCCTATTGTGACATGG
TAAAATATGGTTATACTCTGAaaaataaagtttcaaaattatCTGCAAAT
TGTTTTCACAATCCTTCCTTTTCTGGTATTGAATTGAAAACAGttagatt
tttttgtaaaactatcattctttaaaatttttaggtaaaatatCATATTG
CCAGACATGGTTAATAAGAATCAAACAGATCAAAATATAGAGAGTCTACA
TTTACGTAAAAAGAGACAATCATGGATAAACGAAGATCTGCATCAACTTC
GTCACGAGGATGTAACAAAACAGTTAGGAGTTTTGTTTGGTGAGGATGAA
GCTGACCATTTTATGAACCCAAAAGTTCAAGAAGAAtctaaaagtaaaat
caaaattgtaGAATCAATGCCTAAAGTTTCCTACCAACAAGGCGCTCACA
TGTTATGGAACCATCTGAGATCAAACTCTGAGAAAAAACTATTACATGAA
ACTCGCAATATGAAAACTACAGTTGTTCTCCCATTGAATAACAAAAAGCA
ACAACAACGACTGCATCATGTAGAACAATACCGTCAACGTGTTGAACTGA
TGCACAAAATAGCTCAATTGAATGCTGATAAGACCAAACAGCttctaaaa
acaattaaattgcCAGCTATCGCTCCTGAAGATTANTGATAAGACAAAAC
AGCttctaaaaacaattaaattgcCAGCTATCGCTCCTGAAGATTATTAT
GTATCTAATTCTGTCAGTACACTTGTGAAAAAGGTTAGTAAATTGATCAT
ACCATAATTTATTATGGAATTCTGGTTTTTCGTCACTTCGGCCACTTACA
TTTTCCTATTGGTTTCATAATTTAAAGTGTTGTAAGATGCCAAAGACACG
TTTTATAATACATAGATCCATCTATTCCATTTTGGTGCCACTTAAACCTC
TTGCATCGTAAAGGAGTTTTGATGTAAAAAAACCTAAACAATACAAATAC
TTTTTtgttaatttgtttttcttcagGAAAAGCCAAAGAAACTGCAATCA
ACATTAAAAAGGATATCTCCGGACTATAGTAGAGCAAGTCCAGATCTTTA
TGCCACACCCATCATTCAAGATCGTCCAATAAGTTTCCTTACTGAAAAAG
ACTGTGAAACTCCAGGATCATTTAAAAGAAGACTTCAAGAAAATGGTATT
ATACCCAAGGTGGGTATTTCAAGACCGCAGATTTTGTATCGTTCAAACTC
TGAAATCAGATCTGAGCCTATAATCCCAAACAAACGAAACCCAGTATTTA
TATCCTATAAAAATGAACAGTCTAAATCTTCAAACCCTAATACAAATAAT
GTACCTAAAAGTTATACATGGCAACCTTTGACTTTGAATGCATTATCAGA
ATATGCGTGCTCAATACCTGCGCCAGGCTCTGGTGATTTTCATCATGGTT
CTGCAAGAGTGTGGAGACCAACTACTTCAACAATACGGACTGGAGATGTT
CCAAAAACAAATTCACTTGTTCCAAATACCTCTTGAAAATAAATTGAGAA
CGATTTTAGGTCTGCTATTTGTTGATTTAACTTGTTGTTGATATTTGAGT
TGATTGTCAATGGTTTGTGGCAATGGCACGTGGCTGTTGAAATTGACGAT
GTAATCATCCACACCATAAAGCTGGTTTTCGAACTCTTTCAATATAACAC
TAACTACCTTATGTTGATATTCGCATATCTATGTTATACTAATTGACTCA
AAAGAACTTTAGAGGTTTGACAACCTCCtcatatcaaacaaagttttggC
TGAGTTCACGGTTCTTTGAAGAAAGATATAATCCATATAATTTTGAGATA
TAGTTATTTGGTACAACTAAATATTTGAATGGTACATTCGGACATTACTC
CAATAACAGCGATTGAAACTTAAATAGTTATTTGTGTCATAACAAAAGCA
CACTCCTTTCTTGtgtaaagctgaaaattaatctGAATTAATGGTTATTA
TCTTAAAAATCAGACTTTCATGGAGGAAAATTTAATACTTTTAAACTTTG
AATGTGTAAAGTAAATTCGACGTAGCCCAAGTTAGCCAATCACCCTTTCC
AGTggcaaaagaaatatttttagttttcccaAATTCATGTAGACTCACTG
TGAAACATCCAGTAAGTATGATACAAATTTAGATTAGTTAGCTTTTTCCA
TACACTCTAATGACACATTGTGCAGATACTTAAAATTGAATTCTTTTTTA
TCTATCCTTCCATATTGTTTCATCGACCAAAGTGagcattttcttttctt
ctcgTGTATTCTTTTTAACCTGGACGTggtttttaccatttttctttgAT
TAAGGTGGTCTGTAATGCAGGTTTGAATGCTTACAAATTGCACAGAAAGT
TGTCTCCTAGGTTTAGGGTAGCTTCTTTTGATCTTTAAAGTCTATGATTA
TGCTTCTTAATCATTTTCTCATCTTTATATTTTCCAGATAACTATAAAAC
ACAACGAACTAAACTGCATACTTAAAATTAACGACATGAAAACCAAAGAA
TTTTGACATCAATTAACACTTTGAAATCCTGTGGTTTTTCACTAGTTAGT
ACAAACAAGGAAGACAGCTGGTAAGAATTGATGACTTAatttttcgtaat
tttcttaTTTCATCAGTTTTAACAAAGTAACCTATTTTATAGGAATTGAT
AttaagagtttgaatttcctagTAAGTATTTCACACAAGGGATGGAAATT
TCTTTCGAAAACATCTGAGTGCTTATTTATTTGCCTTCTTGGGTAGCTAA
TATGGGTATGAATCCTTAATatttaaatgaaaattatttgatAACGCAAA
TTATTTGATAATTCGTGAATTCTTTCTATATACCTTTACATTCTAGCCAA
ATCCCTGAAAAGGATTTGCATGTTGCGAAGGTCGGTTTAAGAAGCAGCTG
AACCCTTCCTGGATGTGcgccaaaattttagaaatccCTAGATTTTTAGG
ACTCGGAGGTCCTTTTAATTAACCTTCTGTCCGTCCGTTAGTCTGTTatc
agcttttctcgggattggctcgttagttttactttgtgtgaaattgcttc
attagttttctcTGATATTTTGGAGAAAGATAGAGGGTAAGGTACTCTAG
AAGTTGGCTGAAGTAATTTGTGGAAACTCCCATCTGCAATGTATACACTG
TTCATATAACATTTAACCCCTATAAATCGGATAATATCATGATTGGACAG
TGCTATGAACTTTGTCTGCATTTTCCTTATTGCTGccattttgctatttt
ttcgtaCATCAATCTTTTGAttggtccattcagcatgtagctttaAAGTA
ACTGTTTGGAATGTTGCcgaaattttagatattttaaagGGGAATATTTT
GTCTGTTGCTATGTGATCACCCCTGGCTGACTTTTTGAGATGTGCCACCG
CCCCCTCCCCCCTTCAGAGGAAATCTTCCTCCTCAACAGGTATTAATTCN
GATGTGACCCCTGGATGACTTTTTGAGATGTGCCACCGCCCCCTCCCCCT
TCAGAGGAAATCTTCCTCCTCAACAGGTATATATTGATTTCTTTCTGGAA
TGACCCAGAACATGTGAAAGTTTTGATTATAAAAAAGGGTCAGAGAACAC
AAAATTAAGAGCACTGCAGACTCTTTAGAACGTGTAGTGTCTCAGAAAAT
TACACTGGATAActcaaaatgctgaaaataaaaaaaattttaggctgaaa
tctcaaaaattaagaacactcGAAGTCCTCAAAAGATATCGACGTTCTTA
CAAAATAACGTGTACATGACTTTTGAAGCAGCTTACTTTATAAATTCAGT
AGATgatgtttattttgatttttgtgctcCTCATTACATTATTAAACACC
TATCGCATTTAAAACGAGAAGTTGTTTGTTTTCTCACTTTATAAACACCT
TGAATAGCAATGGGATCAGTCATTGATTTCTTGTAACTAAAAGATCATAT
TGAATCATTATAACATATAACATAGGGCATGTTGCTATTTGCAATGATaa
ttatacacttttttataagaaccaataaaTTATTGCCGAGGCTCGGCACT
TTTAGCCTCAAATTGGTCTTATCCTGTGTTTATTTATAGGTCGAAATTAA
GGTATTTCAGgctttatacccaatttttactactttgaccctaAATTGCC
TTTAAGGCAATACCCTAAGTtaagtaatttcaggctcagcattgttcttt
aattgttcctattttttggcgatttcgAGCCtcattgtaaaaaaaaagta
attataAAAAAGCACCACTCTTGATAGCCTCACATGATGGGTATACATAT
TCATAGTATTCCACTTTgatttttaggcatttttagAATTATAAGTGAAA
TCTAGTATAGATTGCAAATGaggaaaaattcaaacttttgaccaaaattt
gggttaTGGTTCACTTTTTAGCTTTAAATATGTAATGAAACTTGCTTGAA
TCTTCTAATGAAAATTCTAGTTTGTTAGATTTATAAACACACTTTAAAAT
CGCCTGTATATCGTTTTAGAATTTATGTTGATTCAATCATTCAATTCTTG
AACCTACAGGTTTTACctctatttcaaaaatttctttttgccctcttttt
gcctaaaagaAATCTTGAATTAGTGTTGAAAAATTATTAATgccatgttt
ttattatattttgcataatttatgcatcAAGTATATGAACCAATAGGAAG
TCGTTGCCGTGTAGGGGATATTAAATAATCATTAGTTTGAATAGAATGGT
GGTTAACCACAAAATCTATTCGTCGtttcaaataacaataaaaaaacaac
aattgaaaaaatagttttgtaTCACTGAATcaattctaatgtttttttgt
tctGTCGATGACTTCATAGTGTGTGTTTTATGGAGAGTCAGCAAGCTCAC
TTTCTCTACCTcaagaaaaatgtcaaattgatttttttatgacaagCAAA
CAGCATGCGATCATTAAGAGATTTGTTTATCTCAGTCTCGAAGGAGGATT
TAAGAAAATGTTGATGTATTGTTTTTGATTGCTTAtcttttgttttgctt
tattATTGTTAGGGTTATTGATATACCctctgattggttgatattagCAA
GAGGTTTTTACTTAAAACCATACCCATTCCCCTTCAAGAGGGGTTTAAAA
GCTTCTATTGAGGGACGTTTTGTATGATTTATTCATAAATTCTCCCTTTA
TTTTCGATCTTATAGTTCTGAAACAGtaacataaaaaaagaaaaataggt
GACTAACAACCAAGCTACAAAACAATAGGTTTATTAAATgtgaatcaaaa
taactttggaagaataaaaaaagaagaagttttaaGAGACAGATAAGAGA
AAATAGAGAAACACCTTTTACTGTGAAACATCTTTTTGTCTCTTCTTCTC
TCAGTGAATAAAGAAAACTTTGAAGCTCTAAGTTAGCCTGCTGTGTAGAT
AAATGTAATATTCTTTTAGGGGGAGtagattttgaaattatatgaAATTG
CAACATTAGAAAGATATTGATTGATATACCAACAACATAATGACCAGAGT
GGTACCTgatcaaaaatcgaaatttgaaTCGGATGAACTTTTTCGGAAAT
TAGCACGAGAGTCTGAGGTGAGTGATATTCCTTTGTACCAAACAACCACT
TAGACTTTTTGGTAAAGTAACTCCGACTTGTTAAAGGGGGTGGTTTCATT
GTGTTTGTTTGGTTCCAAAGCTTTGGATTTCAAGTTTGATTCCTCTGTGC
TAAATAACCACAAATAACCACTTGCATTTTTTGGTAAAGTAACTCCGAAG
ATGTTTATGGTTTAAAAGTTACGTATTAGTAGGGGTTTCATTATATGTGT
ATTTGGTATTTCAAGCTTGATTTCTAGTAGTTTCAGGGATCTTTTGTAAC
GTGATAAAAACAATATATGGATAGTATATGTATTTTGTTAGTTCTNAGTT
TCAGGGATCTTTTGTAACGTGATAAAAACAATATATGAATAGTATATGTA
TTTTGTTAGTTCTTCCCTGCTATCAGAGTTGACATTAGATTAATTATAAA
CATAATCATCCGGTATATACTGTTTTGATCACCGGAAACTCGCAAACACA
CAAGATAACCGGATATGGTTTGCAATCTGATTACCGGAAAACCACCTTTT
GGATTTCTATTCAACTGTTAATTATTACACATGCGCACGTGTTTAGTTTG
CGTTTTACACTCTTTCTTGGATAACGTTGATGCGGTTTATAGTAGACCAA
ATTAACGTCAGCATGGTTTGCCAATGATTGAAGCAACCATATCGTTGTTG
ATAACATTGTAAACGTTTTGTTGTTGAAGCAATCCTTGATGAACATAATg
catattacacgtttttttttttaataagaacgtcaaaaattttcgaagcc
ttcggatgttcttagctttttggatttgaagcctaaaaatgttcttaaaa
tgttcttattttcagcattttttgagcattttgatNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNaagtctccaaagcc
ttagtatgttcttagaatgttcttaaatttttgggcctcgaagccttatg
ttcttatatagtttgttcttataaaaaaaaaacgtgtatgtataatataa
tatataagaAACGTATAGAATAATGTATAAGAAACGCTCCCTCGGTTGAG
CACTCTTATAAACATTTAAGCTGAACAACTTGATATGTATAATATGATAT
AATAATTAAAATTTACTCTCTTTAAAATGCTTGATGAACGTCTTCTGGCA
CGGTGAATTAAGTAGGAGCGCGACATTGTTTtcacgttcatctaacgtta
ttttTACGTTGTATGTCTTGAGGCTGATATTTTCTCGAGTTCTTACAGTG
GATACGGTGTTCGGCTCCATATTCTTTAATTGGACACATACTGATTTTGA
gaaatcttattttttggcaaaagtaaATCTCATTATCTCTTCAAGCAATT
TTTTCTGTTAGTATTCATTCAAATATTAATCTTTCCAGCTAAGAGTCACT
TAGATCGTGAGACTAAAATGATGTTCCGAATTATTTTTGAAACcaagaga
aaaaaatctgaCAAACTGTTTCGTAGGTTTGAAATCCTTGGAAGTCTTGG
AACAAGAGAAATGGGTACCCCACGCCACATTATAACTAAGAAGCCTCGtt
gagaaaaacacaatttaaaATGTCTCCTTTTGGAACAGTCCTGTTGttat
ttctttgtttactttaacaaatcatttttttatttgcatAATATTTAAGA
TTAAACTTCCGTCATATTAGAAAGACCCTCAGCACCTTCTTAAGTGTCTG
GCGAATCGTTcgtttttttgttgttgctatTTACTGAACGACTCAATCGT
CAGCAAACACCTCAAAACTTCCCAGGGGCAATTTTGATCCAAGAAAAGCT
TTTCGATTAGAAAGAACAAAAACTACTATGGTTCTTCTTGATGTGAGATA
ATAATCACACCCCTTTTTCACAGACCCGGCAGGATTTTTCCATCTAGTGG
GACGAgaataacggactaaaactcgatgggattgatattcccatattttt
tatgactggggGGATTTCAATtcgtttgttttcaagtcagaaaattcagt
ggggatgggaaaaatagcataatatggATTGCAGTGTGGATTGGTTTTTT
TGATTATTATCAGTGGGGATAATTGGAGAATAATTTCCCaccagggacga
tattttgacgATCAATTTTTCCAGTATGAAGGGttcctagtgggtctgtg
agaagggggtgtataatcGCTGTCGCTGGCGCTCATACAATTTTGGTTAC
ACTGCTTATTCTGAATGCCATATTAAGTTATGGTATAAGAGTTCTCTTAG
AGAATCCAGATTGTTTTCTATATTCTCCTCTGATTATCTTTTCGAATTTA
TTTTCGTCAGGTCCGCTACACTGGATACCGTGATCGCACTCACGAAGAAA
GAATCGTTCGTTTTCAAACGGAATGTCGCGAAGGAAGATGTCCAGTGGTA
AGTTCTTTGGTCAATTTTACTCCAATTTACTCTTATACAACACGTTATAG
TATCAATGATTATGAAGTAGAGAACTGTATTTTGtggatgccttggagtt
ttaacaatagggatgacgcgttctttagaaaaaataataaaatcgtttgt
ctcaacatttaacgaccaacagagtcatcaaagaacttgtaaaaactcca
gcttgaccctaTCTTGTAGACCCCTACTGACCAAAATATTGTTTTTACCT
CAAAATAAACTTTCCGGAAGACACACTCTACATAGATTTACATCCTGCAC
AATATTGCATTCATCTATTCTTAGAAGCAAGAAgtccaaaaatatatttt
ggtcATATGTTACATTACTAATTAATCAGTTTGATATTGGAGTGTCTATT
TTTAGCTCTCATCATACCTTCAATACAAATTTAGGCATTTACACCAAATT
AGCATGTGTATCatttcatgtatttttgaaggaaaattgtttgtgtattt
taaagggatatttttaaagaaacgATCTGTCTGCATAGTAGAAATGATGT
CCTTTTTCTTAGTCCAATTCTGGTAATTTCATAATATTATCGCTTCTAAA
GGAACTCGAGGCTTACGATTTAAAGTTCaccaccataaattgacgagccA
TTTTTCCTCGCCTCTGTTgatattgacgtcaaaaatgccTTGAGAGTGTT
TATACAACAAAGTACTTGAGTTTTAATTTGAAGTGAGATTTCCAGatgaa
cttcaaaatatgtaaataaaACTTTGGTGGTTTCTTTCAATGAGCACTTA
AAATAGTTTCGATTTGGCAtaacaatgttttgatttgtctCATGTGAGGC
CAGTAGTAAGCTATTTTTAACTTCATTTTGACCagttcagccaaaatttt
caatatgCTTTGTAAAAATGGTGCAAcccatttattaatttttctatAAT
ATCGCAAGCACGTAGCAACCGGAGGGGGGGAGTAGCAAAAGACATTTCCC
TCCACAATAATTCTCCTAAAAGCTGAGGCACTgtgaatttcaaaattatt
gtcCTGTATTGAGTTATACTatcgcaaaattttctggtttTGTAAGGATG
GCTGAGCATTGGAATTAAATTTCAgcagaaattaaatatttcataattct
CTCGTGTTACAATTTGTAATGAGAGATGACTGACNCACCTTTAGCTTAAT
GATAACAGTAAAAATGGTGCAAcccatttattaatttttctatAATATCG
CAAGCACGTAGCAACCGGAGGGGGAGTAGCAAAAGACATTTCCCTCCACA
ATAATTCTCCTAAAAGCTCAGGCACTgtgaatttcaaaattattgtcCTG
TATTGAGTTATACTatcgcaaaattttctggtttTGTAAGGGCGGCTGAG
CATTGGAATTAATCATGTAGTCATCCACATGAATTCCAgcagaaattaaa
tatttcatCATTCTCTCGTGTTACAATTTGTAATGAGAGATGACTGACTC
CATTTGTTAGCCAAAACTCTTCACCCATAATGACTTTGAACTATTAAATA
CACATTAAAATTAATGACCCATAAACCTTCATTAATCATTCTGTCAATTC
TTTTGATTTCACGACGATTTGTTTGTTCCAAATTCAGACATCACTTAAAT
TCGGGAAACCAAAATTAGATTCCGGAAaccaaaaacgggtttgttttgat
tgtcgAATGGTCGTCTCCTATTTTCATAGCTTACACTTGGTGAAAGCAAA
AACCACTAAAAATGATTGATTTTACAGTACATTGACTCGTGGGAAAAGGT
TTGAGTATGCCAAGAAAGCTATTCAAatgtgaagaaattttaaatttcaa
ctaCTCCGGAAATCCTGTTCAGAATTAAGTCCCTCCCATTTAAATTCGAT
AAAATCATATAAACAGTCATGGTTGCTGAAAATAATATGGAAATGGGGTT
AGCTTGATTGGACCCTAATTGACTTTTCAGTTGAAAAAAAGTGTACCAAT
TTTACTAGAGGCAGTACCAAGgcaattgttggtttgccgtcacccgacgc
tagattttggaggtgggtcggttggtcggaattcttttttattttggcca
tttatgaaattttcgtccatggaagggttaacagtttgtttacatttagg
taattctgaataaaaaacaaaaggaatttacgattcttatgcttgagaca
aacagaatacgagttttgattttttattgtttgaagtttttgaaggaaaa
aaaatcttctttaaaatggcaataaaattttttgggtcggcaggtttcga
ggtaggatcggttgggtgacggcaaaccaacaattttttaagtccagccc
aAGCTATGTCAAAACTCGAGAAAATATACATCCCTCAGCATCCCTGTCTA
GTCTTGTGACAGATCATCCATTAGGCGCACACCGCGCTCAGTTCTAGAGG
GAAGTGAATTTTGCTTACAATGCCCTGGTCGTTAATACGTGCCATGCTCG
GAGTAATCAGAATCCGCTAGGAGATAAGTCCCCGTTTAACATCCATCCAA
TGTCAATGACGTTCAAAAAACGTTGCGTTAACATTTTTTTCCAGGCATTC
ACATCATCTGGGACAAATCTTGTATTATATCTTGGCCCACAACATTATAA
AGACAAAAAAGAACAGCCTCCTCGTGAGTTTGTCGACTTTGACAAAGACC
CTGGAAAGGTAAGGTGCTTTGTTTTCCgtaaattaaaatgtttttcaaag
tttatttttaatttctatgCTATTATTAAACGGAATCATTCCCTGGCTGC
AAATTATCAGATATTTCTTGATTTCAAGTTTACATACATACCCAGTGAAG
AAAGAACTTTTACTCTATCTCTCATTGATTCGGGTGGGGTTAGAAAACAG
GACAACATGGGTCACGGCGTTGCGGCGCTCCTAATGCATAACTGTAGAAA
ATAGTCTTTGAAACATTATTgagctttttatatttttcggaCTCTTTGTC
ACCACGTAAATGCAAGTATAGACTTTCGCACTATGGCCATAAGTAGGGCA
GATGGCTGTCTAATCTAAAGATATTGGGGTCGAATATTATGATTATCATT
TATAACAATCTTTCATTTCCATTCATCACGAATGTCTGTCTCTTTGACAT
CAATAAACTAtaaatttagtaaaaattttagtgaaaatttctcTTCCACG
TTTTGAGggattttggtgttttttttctcattaaaTAGAGAGAAAAGAGT
CTGTAGTTATGTTGtaattattttgagcaaaataCAGGCACGTAAATTTA
TCCAcgaactttttgaatttttaagggGAGATCTTTATCACTTGCTCACG
AAGGGAAAGTTCGTTGAGATGGAAAAATTTGTATAAGAAGTGTGGTCGAG
TTTTGTGGTTTTACATGTTATATATCATAAGGTACTGATGATAACATCAG
AATTGGATTTCGTTtcgtttaaaaaaaacttttctcagactttttttctt
caagGAGGTTTAGATAAGCTTTTTTGGACCAAAATAAACTCCATAATACT
CTAAGTTCtacttaaaatttgaaaatttaaaaatctaaaaatttcttttc
aataaattccACATCTAAAAATTTGCTATCATGACAACAGTAATTTCGAT
ATCTGTGATGTTTGGTTCCTTCAGCTCATTACAGCATTTCCCCTTTATAT
CCTAGAATGGCAGAGCTTTTCAATGAATACGTTCTTCTCAGGGGTTTGAA
TGCATTATTTTATGAGACTAAATCTATCAAGGCAGAAAAAACAGAAACAT
TTGGATTGTcgagtttttttttacttttaatgtacaatcaaggtcataat
atttgagaaaaaagggaaatccaccgggaagtttttgaaccacaatcgat
ttgtaagtgctctaaagtaggttggaagggtagagttttaactctgagtt
ttaacatgagacgaTAGACTttagaccttaggatctgaggatccaaaagt
tcaaaaatagtccaataagactcagaatatagcctggaagtctgccaacc
cctcccaaattgaaatattcgattaaattaaaaagatggccaaaaatcga
ctttctcgccagaactttaaatcttgaaaaacgttaaaatagccaaaatt
ctcaatatattatgaccttgattgtacgTACAAATAAAAAGCGAAAGGTT
TGGTCACAAAAAACCTCATAATATTTACatacttttttaaaaaaccCACA
TCATTTAGGTGAGGTTTGTCGAGATTCATTTCATTTCCTTAACCAAACGC
AAAACCGAAAGACGTGGTTAACATGTCGGTAGATCTGGACACTTTGGTCA
CGCACCTTTTAGAAAAGTATATTCTGCTCTCTTGAATGCTATATAGAAAA
AGTATCGCATTAAACTTGTTATTACCATTGATAGCAAATGATATTCTCCC
GTCCTTTACGTTTCTAGATCTAGGAGCGCAGTAACCAGTgcttatttttt
tgggtcgTCCAAATAAAATcgtcaaaatagcaaaaattatttttgatgca
TCCTTTGGAATTGGTgaatatttgaatttgaaattgttgGCAGCATAAAG
TTTACTGAGGGCCTTTGGCGTTACTATAATAACTCGTTGTTTTAAGAAAT
GTGGATTAAGTCCAGTTCAAACCCTAAAACTTCGTTTAACAATAATGGTG
GGTGCTAAGTTCAGCGCAAGGGCCAACAAAAACGAGAAACtgccaacaaa
aacaaaattttactcCGGATATATTACAGGAGACAACGTTAAGATTTATT
TATATGCAACACTCAAGCTTTCTGTCTccaactttttgtttttgttttaa
aatttttggtatGCAGTTCCCAAGTTTTTGACAGCTGAAGTCATTAGTCA
TTGTTTATTGTTTAGACTGTATAACAGAGCTCTTATTTTCCGCTTTTGTT
TCAATGGTTTTAAGATTAGAAATATTTATTATGAGTCctaaaaaatatct
tttgcgttttcaaaaaattacccTTCTGCGAGTTCTCTGTAATTTACATC
GGCGGATCTAAGGgggttcaaaatttatgaccATTATGACGGAGAAAGTT
TCTTTTAGCCATAATCTGTATAAAGGGAATGGGACTCCCGTTATAAATTT
TGAACACCTCTCAGACTCGCTGTTTTAGGAGATCTAGATCTGAATTATCT
TCTCAGTACAGAAAAAAATATACTGGAAATCTActtggtaaaaaaacttt
tacttcaATTCTACGATTGATTCAGTTCACAGTTTTTCCCTCTCAGATGG
ATCTCCGTCCCATTGAAGTACAAGAAGAGGCTTTTCTGCTACGGAATTTA
GCAATCCCCagtaaaatatattgaaaaccCGGGCTAATTTACCTTGTTAG
ACCCATTTTCCATCTGAAATGAAGAACTTAACTTCGGCCACTGTTGTAGT
ATCACTTATTACGTTTCAGGTTCACCTGAAGAGTACGTTCGTTATGAATG
GAGTATGTGTCATTTTCAAAGGGATGATGGACTTGCAACGTTTAGATGGA
ACTGCTTACCTTGAACTTGATAATATACAATCGAAAGTAAGTACAGttgg
cgctctctaattcgatattcaaggggaattggattttcatcgaataaggg
agcttattgaataagggagcttattgaataagggagcgtcgtttatgaga
gtttctcgttgacggggactttaaatttcattgaataagggagcatatcg
aatagtagaacgccgaattagagagcgttaaCTATATAGAAACCTTCAAT
GGCACAGATTATAAAGTACCGTGGGTACCACATGTTGGGCTTGATCCAAT
TTCCTGTAATCTTGATTTTGGATCAAATAGAGGAGGAGGCAGAAATTATC
GAAAATTTACGGGTTTCAGTATTTTAAATTTAACAGTAAGACCATAGATT
CTTCAACTGATTTTGAGATGCATCTGCTATCAATTACCGAAATTTATAAC
GGTACTGCTCAATGTCTGCTCAAAATGGCTGCATCTTCGCTCGTTCAACT
TTAACGGTGGGAAAGAAATGGGTTTATTAATTAAATTTACGATTGACATG
TCCAATTACTTCATCAATAAAATGAGCACATTAACataccaaaatttcaa
gctGTGGCTAGGTTGTAATCGAGTTATCAATTATTTTAGTCGTGTAACAA
CTTTTAACTTGTGTGCTACGTGCTGTTCAGTGACTCATTGCATAGTTTAA
AAAAGGGTGCGCCAGAACTATGAACCAAAGTGAGGTCAATTAATTGGGTG
ACTCGGAATATTGTTCTTGaaatttttgtggtttttcaAGAGTTTTACGC
TCAATTCTTCATTTTATTCATGAATTcgactttttcctttttttttggat
agcttggcccgtaaagcAACAAATTAAATTGCCTTCGCCTAAACGAAgaa
taatattttcttacaaTTAATTTCAGACAGACAGATATCTAAATTGAACT
AGTATTATCATGCANTAATAATATTTTCTTACCATTAATTTCAGACAGAC
AGATATCTAAATTGAACTAGTATTATCATGCAAACACTacatacaatcat
ggtcgaaatagaatgagaattccggttattttaacgtttttcaagattta
aagttctagcgagaaagtcaattttgggctatctctttaacttaattgaa
tatttcaatatgggaggggttggcagacttccaggctatattctgagcct
tattggactatttttgaactttttaagtctagcgttaaaactcatagtta
aaactctacccttcaaacctactttagagcacttacaaatcgattgtggt
ttcaaaacttcccggtggatttccttttttttctcaaatattacgaccat
gattgtagatataCTGCCCTTTTTTACAGTTCGTATTTGGGTCACGTTTT
TTGGAATGTTTTCAAACGAGTAAATGAACTTCTTTTTATTCTCGTGTATT
GTTTCCGAGCCCGTATGCCACTTGAGGGGGAGGGTCAGTATCGGCTGTCA
TGTATCTCAAacataacacccctgtgtcacagacccgctgggaccctcag
ccccactggaaaatttggcaaaaatttcatccccggtggaaaaaatacca
taaaatttcagccccactgagaaattgacttcgATTTTATCCAaattcga
aattcattgtttagaaattgcactccaaaaccatcccaactggatttttt
aacttggaaaaatagaatttccatACACATTGAGACttcaatcgaaattt
ttatccccgctgtaggaaaaaatttcaacggggctgtgagacagggttgt
accATAGTAACTCCAACTTTATTTATAGATCGAAGATAAGATCATGCGAG
ATACGATCGAACAATCGCGATTACGTTTACAAGAGTTCGAGGAGCGACAA
CGAAGAGTGAAACAAGAACCCATGGAGAACCCAGATGTCGTTGATTATCG
TTCATGGCAACTCTCTTCCGCTGAGGTATaaccatatatatttgaaaggt
cttacacgttttttataagaacaaactatataagaacatataacTTTGAT
GGCCGAAATGAtaggaacaagttaagaacattttaaggctttgttgactc
taaaacaccaaatttcttaatgttgaaattaagaacattttaaggacatt
tttagacttacaactcaaaaagttaagatcaTCGGAAGGCTTGAAAaact
ttagatgttcttataaaaaaaacgctGCTTAATTATAACAAAAAGGACTC
ATTGGGGTtaaagtttttatcaaaatttggacCTTTACTAAGTAGAGTTT
CTTCTCCTAATTTGAAATTgaagtcaaaatattttatgttctttcTTATC
TTATTGTCTATAATCTTCAGGCACAATATGCGAATCCAGAATACAACATG
GTATTTAACTGAACATTTCACCAAGAGTTTTCATGACCAAACACATTGTA
AACCAGATTGGATGAGAGAATGGAGAGTTAGTTTTCTGGTCTGTGATATT
GCTCTCTGACAATTATCGTTGGCTCCCCTTCAACTAAACTGCTGTAAAGT
ATGCCTTCTGTTGAGACTATTAACAATTTTGGTTGGACTAAAATACACTA
ATAATACAACAATATTATTAAAGAGCACATGAACACTTTTAGTGGCATCA
AAGCTGGCGAGCGCCAAGGAATTGTATTATCTCATATCCACCTTAAATGT
CTGAAGATTTTGGAAAACAATGGACTTGAATAGATTACTGACTGTGTTGT
GTGGTAGTGCCCCTATAGCCACAAGCATAATAAAAGATCTAAGGATTGGG
TTAGCTTTTTTCTACTgtgcattttttcaaacatttgagTAAACGTTCAT
TTTCTTTTACTCTAAGAAGAGATTTTTTTGAGGCTAAATTCTAGACTTGT
CATTTTATGAAGGTATGTTTATTTAAATGAAATAGAAAAGGAATGAAAGC
GGGCTGTACCAGTCAGCTATTATATTGTAGAATTTTATtaaggtgtcaat
ttttttcatactCTGTAAGAGAACGTTAGGgaacaaaattttaaagcaGA
TAAAACATATTTATTTGTATCATAACAGTTTTAAATAAATTAGGACTATG
TATATTTAGGATCAAAcgaatttttttgtcttttttttttagttgtTATC
TTATGGTTTTTTGTCattaaatataatattttaGTCATTTTATATCGCTG
CATTATAACAAACTTCCGACCCTAACCTTACCAACGCCCAAAGTCTGTTA
GTGAATGTCCTAACTACGCATGTGGGAGCCCcccccagtggtttgcgtga
tggcgtgattgggacttttttcttgcgttatagcgtgattagagattttt
tttggcgtgatggcgtgataaagattttggcgtgatgcgtgatagggcaa
acatttgaggcgtgatgcgtgatttggg

Coding sequence (CDS) from alignment at sc0000647:89155..106532+

>TCONS_00027825 ID=TCONS_00027825|Name=TCONS_00027825|organism=Clytia hemisphaerica|type=CDS|length=483bp|location=Sequence derived from alignment at sc0000647:89155..106532+ (Clytia hemisphaerica)
ATGGTTAATAAGAATCAAACAGATCAAAATATAGAGAGTCTACATTTACG
TAAAAAGAGACAATCATGGATAAACGAAGATCTGCATCAACTTCGTCACG
AGGATGTAACAAAACAGTTAGGAGTTTTGTTTGGTGAGGATGAAGCTGAC
CATTTTATGAACCCAAAAGTTCAAGAAGAAtctaaaagtaaaatcaaaat
tgtaGAATCAATGCCTAAAGTTTCCTACCAACAAGGCGCTCACATGTTAT
GGAACCATCTGAGATCAAACTCTGAGAAAAAACTATTACATGAAACTCGC
AATATGAAAACTACAGTTGTTCTCCCATTGAATAACAAAAAGCAACAACA
ACGACTGCATCATGTAGAACAATACCGTCAACGTGTTGAACTGATGCACA
AAATAGCTCAATTGAATGCTGATAAGACCAAACAGCttctaaaaacaatt
aaattgcCAGCTATCGCTCCTGAAGATTANTGA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_015722XLOC_015722Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00027825-exon-sc0000647-1491911889:89155..89199TCONS_00027825-exon-sc0000647-1491911889:89155..89199Clytia hemisphaericaexon
TCONS_00027825-exon-sc0000647-1510915933:89155..89199TCONS_00027825-exon-sc0000647-1510915933:89155..89199Clytia hemisphaericaexon
TCONS_00027825-exon-sc0000647-1575043694:89155..89199TCONS_00027825-exon-sc0000647-1575043694:89155..89199Clytia hemisphaericaexon
TCONS_00027825-exon-sc0000647-1491911889:89489..90087TCONS_00027825-exon-sc0000647-1491911889:89489..90087Clytia hemisphaericaexon
TCONS_00027825-exon-sc0000647-1510915933:89489..90087TCONS_00027825-exon-sc0000647-1510915933:89489..90087Clytia hemisphaericaexon
TCONS_00027825-exon-sc0000647-1575043694:89489..90087TCONS_00027825-exon-sc0000647-1575043694:89489..90087Clytia hemisphaericaexon
TCONS_00027825-exon-sc0000647-1491911889:90331..91465TCONS_00027825-exon-sc0000647-1491911889:90331..91465Clytia hemisphaericaexon
TCONS_00027825-exon-sc0000647-1510915933:90331..91465TCONS_00027825-exon-sc0000647-1510915933:90331..91465Clytia hemisphaericaexon
TCONS_00027825-exon-sc0000647-1575043694:90331..91465TCONS_00027825-exon-sc0000647-1575043694:90331..91465Clytia hemisphaericaexon
TCONS_00027825-exon-sc0000647-1491911889:91792..91924TCONS_00027825-exon-sc0000647-1491911889:91792..91924Clytia hemisphaericaexon
TCONS_00027825-exon-sc0000647-1510915933:91792..91924TCONS_00027825-exon-sc0000647-1510915933:91792..91924Clytia hemisphaericaexon
TCONS_00027825-exon-sc0000647-1575043694:91792..91924TCONS_00027825-exon-sc0000647-1575043694:91792..91924Clytia hemisphaericaexon
TCONS_00027825-exon-sc0000647-1491911889:97465..97551TCONS_00027825-exon-sc0000647-1491911889:97465..97551Clytia hemisphaericaexon
TCONS_00027825-exon-sc0000647-1510915933:97465..97551TCONS_00027825-exon-sc0000647-1510915933:97465..97551Clytia hemisphaericaexon
TCONS_00027825-exon-sc0000647-1575043694:97465..97551TCONS_00027825-exon-sc0000647-1575043694:97465..97551Clytia hemisphaericaexon
TCONS_00027825-exon-sc0000647-1491911889:100149..100262TCONS_00027825-exon-sc0000647-1491911889:100149..100262Clytia hemisphaericaexon
TCONS_00027825-exon-sc0000647-1510915933:100149..100262TCONS_00027825-exon-sc0000647-1510915933:100149..100262Clytia hemisphaericaexon
TCONS_00027825-exon-sc0000647-1575043694:100149..100262TCONS_00027825-exon-sc0000647-1575043694:100149..100262Clytia hemisphaericaexon
TCONS_00027825-exon-sc0000647-1491911889:103024..103140TCONS_00027825-exon-sc0000647-1491911889:103024..103140Clytia hemisphaericaexon
TCONS_00027825-exon-sc0000647-1510915933:103024..103140TCONS_00027825-exon-sc0000647-1510915933:103024..103140Clytia hemisphaericaexon
TCONS_00027825-exon-sc0000647-1575043694:103024..103140TCONS_00027825-exon-sc0000647-1575043694:103024..103140Clytia hemisphaericaexon
TCONS_00027825-exon-sc0000647-1491911889:104933..105079TCONS_00027825-exon-sc0000647-1491911889:104933..105079Clytia hemisphaericaexon
TCONS_00027825-exon-sc0000647-1510915933:104933..105079TCONS_00027825-exon-sc0000647-1510915933:104933..105079Clytia hemisphaericaexon
TCONS_00027825-exon-sc0000647-1575043694:104933..105079TCONS_00027825-exon-sc0000647-1575043694:104933..105079Clytia hemisphaericaexon
TCONS_00027825-exon-sc0000647-1491911889:105475..106532TCONS_00027825-exon-sc0000647-1491911889:105475..106532Clytia hemisphaericaexon
TCONS_00027825-exon-sc0000647-1510915933:105475..106532TCONS_00027825-exon-sc0000647-1510915933:105475..106532Clytia hemisphaericaexon
TCONS_00027825-exon-sc0000647-1575043694:105475..106532TCONS_00027825-exon-sc0000647-1575043694:105475..106532Clytia hemisphaericaexon
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00027825-proteinTCONS_00027825-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000647supercontigsc0000647:89155..106532 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
21.9998	22.6722	9.78997	8.4654	12.7968	9.46403	11.5931	11.5628	6.63648	5.91514	4.65121	4.39029	3.3197	2.96551	4.89935	5.44573	5.91319	7.29243	3.61841	3.47225	5.16193	5.52825	25.4854	21.2071	8.49822	8.47455	3.21044	3.24976	10.2833	12.2818
Blast
[Close]
BLAST of TCONS_00027825 vs. Swiss-Prot (Human)
Match: PEBB (Core-binding factor subunit beta OS=Homo sapiens GN=CBFB PE=1 SV=2)

HSP 1 Score: 128.642 bits (322), Expect = 6.672e-33
Identity = 56/117 (47.86%), Postives = 82/117 (70.09%), Query Frame = 2 
Query: 1913 VRYTGYRDRTHEERIVRFQTECREGRCPVAFTSSGTNLVLYLGPQHYKDKKEQ-PPREFVDFDKDPGKVHLKSTFVMNGVCVIFKGMMDLQRLDGTAYLELDNIQSKIEDKIMRDTI 2260
            ++YTG+RDR HEER  RFQ  CR+GR  +AF ++GTNL L   P  ++ ++ Q P RE+VD +++ GKV+LK+  ++NGVCVI+KG +DLQRLDG   LE D  +++ ED + +   
Sbjct:   27 IKYTGFRDRPHEERQARFQNACRDGRSEIAFVATGTNLSLQFFPASWQGEQRQTPSREYVDLEREAGKVYLKAPMILNGVCVIWKGWIDLQRLDGMGCLEFDEERAQQEDALAQQAF 143
The following BLAST results are available for this feature:
BLAST of TCONS_00027825 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
PEBB6.672e-3347.86Core-binding factor subunit beta OS=Homo sapiens G... [more]
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