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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00027823 ID=TCONS_00027823|Name=TCONS_00027823|organism=Clytia hemisphaerica|type=transcript|length=976bp
tgaattttgcaaattttctataaaatcGTAACTTtgtccgccattatgaa
ttCCAATATGGCTGAAGATgacctaaaaactggttttctgtaaagttttc
cacccaaagttttattttcatttagttTTGAGGTTTTTACACCCCTCAGC
AGTGCACAATGAAGACATTTTTCTGGCCTTAAATGGCCAGATCTTAGCTG
AGCCATGTTTCTTAATCTTTTCTCTAAACAAAAGGCCGATCTAGACCGGT
CCATATCGGCCAAATTCGGCCAAGTCCGGTCTGTTCcggtctgaaaaaaa
aacaggcaaATCTTTTTCGTATGAcggtatttttttgtttacaatttcga
gtgcctaaaaactttcgaatctttttgtaaagtgTTCAAATGAACTCCAG
AGAacgttcaaatgttttgaaaagtctcttactctaaaatcaaaacaaaa
gcaaaaggaaAAGTACCACAACAGAAGCAAGAAGGTGGAagtatttttat
gttttcactAGAGTGAAAACCGtcacgaaaataatttttcatgagcTAAA
GGATTAGATTATAAATTATCAAGATAAGTGTATTATTCGAATATCAGCAA
AGGAAAAGGCAAGTAACAGTTTCTTTTTAAGAGATTAAGCTGTCGTTAGT
CAAAAGGTCGAAACAACCAATATTGTTCCTTTTGGTTTTGGTGTTACTTT
ACTAGCTGTGTATGAAAtacgaagaaaaatattgacatgcAAGTTATAAC
AGGGGAGACATAATGTAAATGAAACAGGGATGTCTAAATAAACTAACGAA
GGGACACAGTGCAATTCTATTCCAAGGAGGATTTCTAATAATCTTTTCTA
AATGGTTCATAAGAGCGAGTGAGACAAGGTTATGAAATACAGGGGAGTAT
GTCATTTACGACGAAAAAactgtttgaaaacaattttgcttaTAATCAGT
AATTTGGCTTCCGTAAAACGTTCTGG Run BLAST on NCBI transcript from alignment at sc0000646:113968..114943 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00027823 ID=TCONS_00027823|Name=TCONS_00027823|organism=Clytia hemisphaerica|type=transcript|length=976bp|location=Sequence derived from alignment at sc0000646:113968..114943 (Clytia hemisphaerica)
CCAGAACGTTTTACGGAAGCCAAATTACTGATTAtaagcaaaattgtttt
caaacagtTTTTTCGTCGTAAATGACATACTCCCCTGTATTTCATAACCT
TGTCTCACTCGCTCTTATGAACCATTTAGAAAAGATTATTAGAAATCCTC
CTTGGAATAGAATTGCACTGTGTCCCTTCGTTAGTTTATTTAGACATCCC
TGTTTCATTTACATTATGTCTCCCCTGTTATAACTTgcatgtcaatattt
ttcttcgtaTTTCATACACAGCTAGTAAAGTAACACCAAAACCAAAAGGA
ACAATATTGGTTGTTTCGACCTTTTGACTAACGACAGCTTAATCTCTTAA
AAAGAAACTGTTACTTGCCTTTTCCTTTGCTGATATTCGAATAATACACT
TATCTTGATAATTTATAATCTAATCCTTTAgctcatgaaaaattattttc
gtgaCGGTTTTCACTCTagtgaaaacataaaaatactTCCACCTTCTTGC
TTCTGTTGTGGTACTTttccttttgcttttgttttgattttagagtaaga
gacttttcaaaacatttgaacgtTCTCTGGAGTTCATTTGAAcactttac
aaaaagattcgaaagtttttaggcactcgaaattgtaaacaaaaaaatac
cgTCATACGAAAAAGATttgcctgtttttttttcagaccgGAACAGACCG
GACTTGGCCGAATTTGGCCGATATGGACCGGTCTAGATCGGCCTTTTGTT
TAGAGAAAAGATTAAGAAACATGGCTCAGCTAAGATCTGGCCATTTAAGG
CCAGAAAAATGTCTTCATTGTGCACTGCTGAGGGGTGTAAAAACCTCAAa
actaaatgaaaataaaactttgggtggaaaactttacagaaaaccagttt
ttaggtcATCTTCAGCCATATTGGaattcataatggcggacaAAGTTACg
attttatagaaaatttgcaaaattca
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00027823-exon-sc0000646-1491911889:113968..114943 | TCONS_00027823-exon-sc0000646-1491911889:113968..114943 | Clytia hemisphaerica | exon |
| TCONS_00027823-exon-sc0000646-1510915933:113968..114943 | TCONS_00027823-exon-sc0000646-1510915933:113968..114943 | Clytia hemisphaerica | exon |
| TCONS_00027823-exon-sc0000646-1575043694:113968..114943 | TCONS_00027823-exon-sc0000646-1575043694:113968..114943 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000646 | supercontig | sc0000646:113968..114943 . |
Blast
The following BLAST results are available for this feature:
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