TCONS_00027750 (transcript) - C. hemisphaerica

Overview
NameTCONS_00027750
Unique NameTCONS_00027750
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length186

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00027750 ID=TCONS_00027750|Name=TCONS_00027750|organism=Clytia hemisphaerica|type=transcript|length=186bp
AAAACATTGGTCCAAAAACTGATAATTCCAAGCAAACACCAAAGAAAAAC
ACACCATTTAAGTCCGCAGATTCCTTTGATTCGCCAGGCATGAAAAGACC
GTCAACCAGTTCAGGAGAGACTCCTACGAAATTATTTCGTCCCAAGAAAT
CACTCCCTGCAAGTGATACAATATCAGATACAAAAG
Run BLAST on NCBI

transcript from alignment at sc0000644:4147..4611-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00027750 ID=TCONS_00027750|Name=TCONS_00027750|organism=Clytia hemisphaerica|type=transcript|length=465bp|location=Sequence derived from alignment at sc0000644:4147..4611- (Clytia hemisphaerica)
AAAACATTGGTCCAAAAACTGATAATTCCAAGCAAACACCAAAGAAAAAC
ACACCATTTAAGTCCGGTAAGGATTATTGTTTTGCTTGAAATTTACAATT
ATTCAAATTTCTGTTGGAATTTATAAATTCAACAGAAATTACAGAAGCAT
TTAAGGTTTATCTCTTGATTTTTTTGTCTTTTCGTTTTTGTTTTTTACAC
ACAATTTTGAGTGAATATGTGAAAATGACATCCTAATATCAGTAAAATCA
ATTCTCTTAAAGGTGTGATTATAAAGAGAAGTCAGATTTAGTGAAAAATA
ACTTTACTGGAATTATAAATTTAATCTTAACAAATTTTTATTCAGCAGAT
TCCTTTGATTCGCCAGGCATGAAAAGACCGTCAACCAGTTCAGGAGAGAC
TCCTACGAAATTATTTCGTCCCAAGAAATCACTCCCTGCAAGTGATACAA
TATCAGATACAAAAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_015669XLOC_015669Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00027750-exon-sc0000644-1575043694:4546..4611TCONS_00027750-exon-sc0000644-1575043694:4546..4611Clytia hemisphaericaexon
TCONS_00027750-exon-sc0000644-1575043694:4147..4266TCONS_00027750-exon-sc0000644-1575043694:4147..4266Clytia hemisphaericaexon
TCONS_00027750-exon-sc0000644-1510915933:4546..4611TCONS_00027750-exon-sc0000644-1510915933:4546..4611Clytia hemisphaericaexon
TCONS_00027750-exon-sc0000644-1510915933:4147..4266TCONS_00027750-exon-sc0000644-1510915933:4147..4266Clytia hemisphaericaexon
TCONS_00027750-exon-sc0000644-1491911889:4546..4611TCONS_00027750-exon-sc0000644-1491911889:4546..4611Clytia hemisphaericaexon
TCONS_00027750-exon-sc0000644-1491911889:4147..4266TCONS_00027750-exon-sc0000644-1491911889:4147..4266Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000644supercontigsc0000644:4147..4611 -
Expression
No biomaterial libraries express this feature.
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00027750 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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