TCONS_00027678 (transcript) - C. hemisphaerica

Overview
NameTCONS_00027678
Unique NameTCONS_00027678
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1585

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00027678 ID=TCONS_00027678|Name=TCONS_00027678|organism=Clytia hemisphaerica|type=transcript|length=1585bp
TTTAGATacgattaaaataaaaaagttaaaatagaaaataatgtCATATG
AGAGATTTGACAGTGGAACACAAAACTCAAACATGCAACAAGGTTTTCAA
CATCAAAACACAACAATGGTCGTTGCTGCTGGAGGAGCACAACCAGCTCC
TATAATTGTTGCACAACAACCTTACAATCGTTTTGCTGCCAAAGCTCCTG
CAACTAGAAAAATAGGTTATTGGATTCTATTGAATGGCATGATCACTCTT
GTTCTTGGAGTTGTCATGATAGCAGCAACACTTGATTATTGGACTTCCTT
CATTGCTAGTGGTATATGGACAGGAGTATTTGTGATCATCGCTGGATCAC
TTTGTATTGGTGCTGGTGCCAATGAAAACAATACTTGCTTACGAATTGGT
GCACTGGTGATGAATATCATTGGAATGCTCGCTACCCTAAGTTCTTGTCT
TTTGATGTTTGTCGGATTCGGACTGGGAATGGGATGCGATCGTAGACGAT
GTTACACAAATTATGATGGACGATGGGTTTGCAGCAGAAGTAGTTGCGGC
CGCCATTTTGACGACACTAAAGAAGGCAGTTACATCTCACTTGCTGTAGC
TCTCTTAAATGTTATTGTTTTTGTATTGATGTTGATTGCTTCTGTTTATG
CTGGCTGTGGTTGCTGTTGTCGCCGTAATGGTAACTCAACGCAATCCCAA
GGTAACATCGTAATGGCTCCTACCCAACAGTCTTATGGTGGCCCAGTCGT
GGTTTCCAGCAATCAAGCCTACTCACACCAAGCATACTCGCAACCGCAAT
CTCACACTGGTCAGCCACAGCAATACAGTCAAGCAGCAATGCCATCAGCT
AGTGGTGGTCAAGTCACATATGGTAATGATTATCAGCAACAACCAAGACA
AGAAGAACAAAAATTTATGCCTCCTCAAGATGTACCTCCAGCATATTCAA
GAAACTAACCACAATTCGATGAATGGAAACCGTGTTTTttagccagaaac
agctattttgtccagtttttgcgctttttgaagctcaatatctcgagtta
ggtactgaaatcacctatacttgcaatatatctctaatcttcattttttg
agaGCGTTCCAAAAAtttacaacaggtctccgttttctcgaactaaaatt
ttcattaatttttaaccctatgatttttgcctgagaccgtcatatttgtc
cgaaaatcacaccaaagtgtccgaaaaaaaattggaaacatcgtaatttc
gattcccttaccccttagctttccaaaaatgtataacaagtgctttgatc
aaaacatttgagcgattttacaaaatgccctctactaataCCCCGATCAG
AGAAAGAcaagaatttgtttttttctattctTCATCCACGAGAGCCTTCC
CCTTCTTACCAACTGGCAGACATCAAATTGGGCAAGAGGTTTGTAAACCT
AGGCTGGGTAAATAGTAAATAGAAATTGAAATATGTAGTAAGTagtgttt
tattttttagccATATACtattctttgaaaattattgaaattaatTGTCA
GTGCGACTAAGCAGACGTTCTTAAATAAATCGTGA
Run BLAST on NCBI

transcript from alignment at sc0000639:104401..117022+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00027678 ID=TCONS_00027678|Name=TCONS_00027678|organism=Clytia hemisphaerica|type=transcript|length=12622bp|location=Sequence derived from alignment at sc0000639:104401..117022+ (Clytia hemisphaerica)
TTTAGATacgattaaaataaaaaagttaaaatagaaaataatgtCATATG
AGAGATTTGACAGTGGAACACAAAACTCAAACATGCAACAAGGTTTTCAA
CATCAAAACACAACAATGGTCGTTGCTGCTGGAGGAGCACAACCAGCTCC
TATAATTGTTGCACAACAACCTTACAATCGTTTTGCTGCCAAAGCTCCTG
CAACTAGAAAAATAGGTATGATTTTATATATTCAATGTCTATAATATAca
cgaaatttatttttttttaattaattttctcGTGGTCTTATCTAGGCCCG
GCAAACGAAATAATACATGGCCTCCGGCGTGCGAATCGAATTGAGGAGGC
CAATTGAATCTGTCGCCCACCATGATTGGgtgacgaagaaaattttcgac
ttttcacccttatttcacccctctaaacggtagatataagattttttaaa
gtaaagaaaattacTTAGCAAAATGTTGAGGGGGGGGGCGCATGGTGACG
GGGGCCATGTAATAAGACACAAAAAAATTACGATTTGCTGGTAGAAAGAT
TTGGTTCGACGCCTATATCAATGCTAATCAATACTGGGCTTACTATGAAA
TAGCCGGTCTAGAATCTAGAATTTTCCAGCAAGCCTATCAAAAACAAGAC
AAAACTCCTGggtaaggaaaattatttatcAGAAGGTCAGATTGACGGAG
TGTTTAACTGATAGAAAACCACTATGCCACAATTATCTGAGATTTTAGTC
TTTCAGCACTCTTGGACTTTCATAAGGAATAAAAGATCCCCACTTTATAT
ATGTATCtggataaattttcttttcagttgATAAcccaggcccggcggaa
gcggggaaGCCGGGAAGACTTCAGCCTCCCTAATTTTGatcaaatgagat
tttttcttctcaaattcctagcaaatCTTATCTCAAgctccccactttta
cggttgttccaccGAGCCTGTTACCCATTAAGTGCCACTCATAGCATTTT
GAGACCACTCATCTTTTTTGATTATCTACCGACCGGTCAGGATCTAGGAG
CGCTGCAAGAGTCAAGATTTAGAATTTAGAATCAAAAGaatatttgaaaa
cttaaaagtTACGGAGCGAATGGTCATTTCAAATTCAATGGGTataaatt
gcactccaaaatgTGCAGTAAAAATGTGAAGCTTTTAAACTAACTTACAT
TTTTCTATACAAGACTTGCGTATATAGAGCACTGAAGATGATTTTTATTC
CAAAAGCTTTTGCTCAATTAAAATAagactttgttgtttttttcttttaa
tgaaCATTATATTCTATTATATTCCAAGGTTATTGGATTCTATTGAATGG
CATGATCACTCTTGTTCTTGGAGTTGTCATGATAGCAGCAACACTTGATT
ATTGGACTTCCTTCATTGCTAGTGGTATATGGACAGGTATGCTAGACGAA
TCCCCCCAAAGGGATTCAAAATTCACGCAATCATGCAAATTTCTTTTCAG
ATGTCATGCCATATTGTTCGGAAATTCACGCCATCATGCCACGTAAAACC
ATCCATTATGCCATCATACCAAGCACTGGGGGAAGGGACTCCTACTACAC
CAGGCCGAATAAAATCCTAAATTTAATGATTCTCAACATTTGTACTTGAC
AGGGTCGTCTTTTGGTTagtttggacaattttcagggtggaaattggCAA
GGCAAGTTTTTCAACAATTTCTCTGCATTTCGTCATTTTTGCTACTTTTC
AAGGTGAAAATGAGAATTTCTTTTCGCTTTTCCTTCCGAAAGGGTCCcta
atttaccaaacattcatatctgacagggtcaacttttcaaattccagtgg
cacgtccccgtcgggcATCAGGGTCAGTGCCCCCTGCCAATTCGATTGAT
ACGTGCATATGTGTATTATAATAAAGGGAAAACAAGACATATTTCAGTAT
TTTCCTTCCTCAGGAGTATTTGTGATCATCGCTGGAACACTTTGTATTGG
TGCTGGTGCCAATGAAAACAATACTTGTTTAAGAGTTGGTGCACTGGTGA
TGAATATTATTGGAATGCTTGCCACATTCAGCTCTGGTGTGATGATGTTC
ATTGGGTTCGCGTAAGTCTTTTTAATATCGGTGGTCTTGCAACCAGAAGA
AATCAAGATAAACTgcttttttttaagaagtcCGTGTCTTTTTCGTCAAT
TAATcccgagaaaaaaaaatccaagaccGTTAATTTTAACATCAGCGAGT
TTATggatgtgtgtttttctgcgacggagacagTTAGCTTCTGATTTGAC
TACATCCTGAATGGcagaggacgacggtaaataaGTACTTTTAGCGTCCT
CGATTTGGCGGGTCAAAAATGCGAGTTAATCCAAATCTCTTCGATCACTC
GGCCTTCCTTAAAAGTACACATTCATAAACTCGCTATCTAATATTATATT
GTCGATATTTTACGCATAGCTCAGTAATCTTGGACATCTAGACAGTCTta
cgattgttttcacggggtccactgCCTGTTGGcttggctatctatgaact
gaacagaaCTTGGGAAGGGGAGAGGATTCGAACCTAGAGCCCCTGAGTAA
TGGCAAtgacgccttagaccactcggccatctcTCCGCAAAGACATGACA
TTGTCTGAGATAAAATCGAAAGGCTTAATCAACTTTTCGTGATTCGATTA
TAATTTGTACTCCAGAGTTGGTATCAACTGTGATCATACACGATGTTACA
CAGGATATGATGGCAGATGGGTTTGCTACAACGATTGTTTTTGGGGAGAT
GCTAAAAATGCTAGCTACCTCTCACTTGCAGTAGCCGTTATGAATTCGAT
CGCTTTCATACTGATGTTGGTTGCATCGGTTTACACTGGGTGTGGTTGTT
GTTGCCAAGGCAACCCGTATCCATATCAAGGTAGGGTGTTGGATCTTATC
AGAAACCTCTTTTCTAGAAAcgaattgaaatttttatcatatgttaaaat
tttaacaaaaatacttTTCTTAAAATGGAAGAAGCCCGGGTTACCCCATT
ATGAaatttgaacttgtattcacacACCAATGCTGGTGTTTGCCACATCA
TATTCCGATATCCAAAAAGCCTTACAACAAGCAAAATTCCACCGCATAGA
ATTTCAAACTCTTCTGCAGCGGTGATGCAACGCTAATATAGGTCCCGGCG
TGTTCCGTTGAAGTGAGGGGAAGAAATTGGGGGAAATTTTTCGACTGCCA
TAGCTAAGCGATGAAGAAAATTTTGCGCTTTTTATACCTTGTAACACCAT
AAAACGCTCTTTTATGAGATAAAAACATAGTTTTAAGGTTTTTGACTTGA
ATTATGCATCAACTATTTTTATACAGGTGCTGTTATGATGGCCCCTACTC
AACAAGCTTATGGTGGCCCAGTTGTGGTATCCAGCAACCAAACGTACTCC
CAACAGCAAGCGTTCTCACAACACCAAGCATACTCTCAACCGCAACCTTA
CACTGCTCAGTCACAGCAATACAGCCAAGCAGCGATGCCAACAGCTAGTG
GTGGTCAAGTCAAATATGGTAATGATTATCAGCAACAACCAAGACAAGAT
GAACAAAAAGTTATGCCTCCTCAAGAAGCCCCACCAGAATATTCAAGAAA
CTAACGAATGTTATTCCGTCCATGGGTCATTTGAAGTCTTTCTTTGTAGT
ACTTTTACgaaagaaattattttgaattgcAGCTAAATCCCGAGAAGACG
CAATGGACTTAgattattttctgaaaatctcGACCTAACCCCGGTTCGAA
CCAGCAAAGTAAGCTTATCAGTGATACAACCCAACACACTAACCACAAGG
TTGCCAAGACGCTGAACATTTCCTTAACTTGAGCAAATTCATAAAGTGAC
ATATGTAGTATATAATGGGTAACCAGACCTCACGAGTTAGTCTAACTGTT
ATGATCGCAAATCCTCCAAATGAGCCCCACTCATCCTTGGAGGGTAAACC
ACCGACCAGGTATGGGGGTCACTTTTGTTTACCAGGTTGGGCAGCCTCCG
TGCTCTATATAGGCCATGCGCGCCCTGCGCGTGATACTTGTGTCTTCTCG
GGGTTTAGTCGCTTCTATTATTTTGTTGTAgaagccatatttaaaaatca
gaaaaatgatTATTAGAATGAATAATGACCTAATATAATAATGTATGTAA
ATCTACAATCACGgtaaaaatatattgagaatttagcttattacctcttt
tttcgaaatttggagttcacttttgggctaattgaaaaatttattcgagt
atttcaattcggaaggggtttatagacttctatgctatattctgagccct
attgcaccatttttggacttttaGTTCCTCAGATCTTAAGGTaataagtc
ttaagtctagcgatAAAACTCAAAggtaaaactctacccttccaacctaa
tttagagcgcttccaaatcgtttgtggttataagatttcgtaggaatttc
acttttttctcaattattacgaccatgattgtaataCACACCTACTTCCC
ACAGACAAGGTAGGAACTTTTCAGCCAGTAGGGGTTAAAAATAATGGATT
GAAACCCGATGGAGATTgttattcccatatttttaaaGCTGGcaatttga
attctattgtttatttCAGCAAATTCagtaatgattaaaaaatagcATAG
CATTTTGctgtgaggatttgtttatttgattaccTTCAGCGGGAACAAAA
AATGGAGTACATTTTTACTTGGAACGATATTTTATTCAATCCCCCCCAGT
GAGAGGGGGTCCCACTGGGAATGCGAGAAGGGGGTTTGTACTTGATTAAG
TGCTTGAAATTTAAGATATTCTATTTTATGTTTAACATTTATAAATTAGG
GATGCAacgattgtaaaaatttgtttcatCTTTCACATaaactagaaaag
aaaagattttctttagaaaatgTCTTCTgggttgaaaaaaattattatta
gcTCTTGTCAAGGATTAACCCAAAATTTAAAATCGACGATATTTTTTCAT
CTGTACAaggcaaaaacgtgaaaatttatggaaaagtttcaaattaaata
aaaatattttttctcaatatCAAGCTAATTCAACTTATACTTTTTACTTA
AGTTACCGATGCATGCCCTATCagaatgatacaaaatagcttAGTAAAGG
ACTAGTAACGAGTTATGGTTCTTTTGTTAACGGCTACGCTTTTCTTAAGT
GGTTTGTTTATAGTAATTGGACACCAGAGTCAACATTTTTTCCCTTTTCA
CATTAATTCAGACAGCTTACTGTAAATGTAATTGGAATGGTTCAAGGTTG
CATAGACgagataaattttatttttggttcGTTTGCGCATTTTGGAGGAT
TTTGTAGGAAGATTTTATTTGGAAGATAATTGAAAAAGATTAACtgataa
aaaatatgtttttcggGTTTAGATTACTAGATCATAAGGTACTTCAGTTT
AATATCAATGAGAAAACATTTTCACTGTAGTGAAAACTTCCAAAAACCTA
TAAATGAGCTTTTGTCTGTCTTTGAAATTGTAATCAAGAATATATAGCAG
TTGCTAATTAATGTTTGCAAGTGTTTAGGGTTCaatattaaaattaaaaa
ctgaaaaacataTTCATGTGTAAATGTCATTGAAAGTAATTACTATTCAT
TTGAAAACGAGACCCGCAATGCTGTTGATTTATCTTGAGAAGTATGTAGA
ATTCTGATTTTCTTTAAGTGTTAGAAAAAAGCCATGTCCTACCATAGATT
TGACACTAGTGAAACACAAAGTGTTCCCATGCACCATGGAGTACAACATC
AAAACACAACAATGGTCGTTGCTGCTGGAGGAGCACAACCAGTCCCTATC
ATTGTTGCACAACAACCTTACAATCGTTTTGCTGCCAAAGCTCCGGCAAC
TAAGAAACTAGGTATTTATCAACCTGATCCTAGTGTATcctaggctttat
ttacgttactgacgGACGCCATAGAGAACACCCTGTTGTTTGCTTTTTTC
GTAATATCGTAGATCTTTTTGCTTTTATCTGGTTAATGACTTGAAAAAGT
TGACTTATGTATTATACGTTTAACTCGTAGTTTTGGTATGTAAATGTCCT
GggatttatctttttttctgacgttaccCTTTTATTCAAATtgatatttc
acaaaaattaagcATTAACTGACTTACTGGCAGCTCATTTTAGGGTCATT
AAAAAACTTGTAGGTACTTGGATATTGATATTTCGCAAAAACTCGTAATT
ATTTTTCGTAGGAATATGGATTCTAATGAATGGAATTGTTACTTTCATTT
TTGGCATTGCCATGATATCGGCAATTGATTATTGGACTTCGTACACTGCT
AGTGGCCTATGGTCAGGTACGTTAAACAAtagctctcaaaaaatttttgt
caacaaCTTGATATTGAAATCAGTGAGTTTTGTTGAATTGTACGAGGTCC
CTTTTACGGGCAGAATTGATGTTGCACTTTTTGTCATCTCAaaaatgaag
tcgttgcattgtttTTCGCGCGAGTTCTATTTTCTGCCAGTCAAATTGTg
tcacgcattcgaaagattcgaaaatgttgcaatcaaaacattgaattcat
ttgtgagtttggttttgagaagaaaacattttctaaaacttaaacctaaa
atattgtgatcttattcatattttgaaaagactttgagaaacagaaagtt
ataaaatttattacatTGAGGTTGTAAGGGGTATGTATGTATGGAAagaa
atggaatgctttgtttgcttcagttttcactaCAGACTTTCCTCACTTTC
CTcccttcgaaattcagttttcgatgggagcctttatttatctaaacttt
gtttttattaatggtGATTCATTTTTGGACATCAAAAACTCCCAATGATA
ACCAGTAAGTTTTATTTGTTTTGGAGGTAAAAAATGCTAAAGAGAATGAG
TAGATATGTGTCGAAATTGCGCTTCCATTGAAACGTGACATTGAcgtttg
aaaaaagatataacttcaaggcaaaaaaatctattaaaattggattacaa
cctgtacttttttatatatcattttttagcattttgtaTCCTCTTTCACT
TGCGATGGGTGGGAAAGTTGTCTAAATATACTTAAATCTCTGTCATCATT
TTTGTCAttatagtgaggtctgttagcacaaaaatacttcagatggtgac
aaaagcatgaaatttggcacagatgatccttagagggtctaaaacttaat
tttaaacagtaacaaaTTTtcccacctggccacctgccagatgacgtcat
caggtggctgggcaaaaaataattttttgaaaatattcaaaatctgatga
tTTCAGCGGAAAGAACATGAAATactgatgaaaattgaggtataaaacat
gccttgaaaatcttcctatcaaaagttacgaaGGTTggaagttttgtgat
gacgtcatcatcacaagcctttccaggcaaaacctaaaaatcctgtaata
acggaactagttAACCAAATTTGgagttttatacatgaatccatgtcaGA
AATCGAAGTTCCTtctgatgcttgggtctaaacGACATATCGTCTAAAAC
GACATAAgaaggcttaaaacatccaaaaaaattagctgTGTTGTACACTG
TGTTCCTAAAGGGAGGAAGCTGCCTTGATTTGCCTTGTCAAAATCCAAGT
TTTAatactatactatactatactacTGTAGAATTTAAAGCTtctaattc
aatttgaaaatcagaatcagaaaaagaaatgaattttgatatgaattcat
gtttaaaacataaaatttggtcaatttgttccaaaattacgaggttttta
agttttgccttgAAAGGCTTGTGAttacgtcatcacaaaactttcaacct
ccataacttttgataggaagattttcaaggcatgttttatacctcaattt
ttatcagcatttcatgctctttctgCTGANNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNtacaattatacaccg
accagatcaggttttatgacttttttgtgcaggcatataataaaatccag
ctaaaaccctgtaaaatcccaaaatcttaaattttgcataacttttgatc
taggcatccaattgacttcaaactttgacaggttttaggtatcaatgata
gattttgaaaaatattttaaaaattttcaaaaactgctgacgtcatcata
aatgacgtcatttttttttgaaaaaatttactcattttctgcattgattt
taagcctcgattttattagtatattaaaaaccggcaaatatgttaaagat
attctttttggcttttagaaattcaaaacagaattgaaaaatctccattc
gttcaactttaattgctattttattgaatagtactttttcattggtcagc
gataattgtgaaactttgtgatgacgtcatcacctttatgatgacgtcat
caacccaaatttttttctatgaactccttttatggtagaggacctttgtg
caaaatttcaagtccataccttttctagatcaaaagttatgcaaggctgg
tggaaaacaccccaccttgagaatacaaaatccgaaaaagcctgataata
atagggtgaaaccatcaaattttgaatattttcaaaagaataattttttg
tccagccacctgatgacgtcatctggcaggtggccaggtagGAAAATtcg
gtgttactgtttaaaactaagttttagaccctctaaggatcacctgtgcc
aaatttcatgctttaattaccatctgaagtatttttacGTTCTTATATGC
TAACAGGCCTCACTATTAACGTCAGAATTTATCAgcctttttttttttcg
tcagaGTGACAGTGCCTATCTTTAGGACAAAAAAGTCGATGGAAAAAAGG
GCTGGACTTTCTTTCTAGAGGGGTGGGAAGTTGAAAGGTATTAATTTTGT
ATCGTTCCTGCTCTCTTAAAGTTTgtcaaattatcaaaaacatataaaaa
agtaACCTTTACATTATcgcttcaaacttttttacaaacttaCAAATCTA
AGCAAGTTTGGTATTTCTTAAAAGAGGACAGATTCAGtgattcaaaaata
tcaaatttatgtCTTAAAACGTTATACACAGGAAGCAGTGTAATAAACAA
GGGGAGGGAAAAACTAAGAAATTTGCAACTtctaattttttgacgtcaaa
atctaCGCCAAAACCCTGGGGATTTGTTTCATGTCAAAAATTATAACGTC
AATTCTGCGCGATGGTTTACGTGATACGGTGATGGCGTGATTCCAAATTT
TATATGATGGCGTGATCATCGATATTTTTTGAGTGAGAAACCAATTTTAG
CAATTTATGTGATCGCGTTGGGTCTCTATTATCCCCAGAAGGGGTATCCA
GGGCAAATGAATGGCAAGGTTACATGACATTCTCAAGGATGTCTTTTGGG
TCTTTAAAATTAGGATAAGGTTGAGAAAAAGGAATTGTAAATAAGATAGG
ACTGCATAGGAACTTTGGGTTTGTCTTTATCATCGATGTTTTTTCCTTAG
GAGTATTTGTGATCATCGCTGGATCACTTTGTATTGGTGCTGGTGCCAAT
GAAAACAATACTTGCTTACGAATTGGTGCACTGGTGATGAATATCATTGG
AATGCTCGCTACCCTAAGTTCTTGTCTTTTGATGTTTGTCGGATTCGGGt
aaggtttttatttttattaagaAATTTTCTTATTAAGAAACGCAAAGACT
ACTTCAGACTACCTACCTTTGCAAATAAATATCCTACATATTACGTCCGC
AGGTTTTATGTATTTCGAAGAGGGCAAAGTATGCAAATAAACAGGACCCG
TCTGGTTcaatttaaatgaaattttgagagaaaCATGGCTCAAACATCTT
TACTAGATTTAGGTCAATAGAAGCTACAATGCAGGAGGAAATACAAAAAT
TTGGGTATAATTAGGGCAGCATTGACGTCATCACCGATATGAGAATGTGC
AATTATAGATATTGCTAACATGAATCTACTATTACATTTCGAAAGTTATT
TGTAAGATTTGTCCTCTTAGACTGGGAATGGGATGCGATCGTAGACGATG
TTACACAAATTATGATGGACGATGGGTTTGCAGCAGAAGTAGTTGCGGCC
GCCATTTTGACGACACTAAAGAAGGCAGTTACATCTCACTTGCTGTAGCT
CTCTTAAATGTTATTGTTTTTGTATTGATGTTGATTGCTTCTGTTTATGC
TGGCTGTGGTTGCTGTTGTCGCCGTAATGGTAACTCAACGCAATCCCAAG
GTACCgtgttttattattattttgtcgATGGGAACTTCACCAAACAAACT
CGAACCACGTCCCTTAGCTTTTTAATGGTTCTGATAGCGCCAAAAGCCAT
CGGTAAACTCAAAAAGGGGTGACTCTTGGTACAAAATTTTTTCAGCAACC
ACCTTTCtaccagggatatgttatagcggagctggatgaaggacgagaat
tcctttagcggattgcttctttgtattttctattgtaaactgttgataat
agaaatccatctctgtccccttgagtgttctgtttttataagaaaaatga
agcagacaaagtattcatgcagtacgtttgcacatattatgctatgatgt
tcccacttttcatcaaaataatatttgtagaagataccccaaaagcttcc
ttgttaaatgaaatctatttttatcagcgtgtgttatgaatttgagaagc
tttcatgatttctctttaaaaatttcggatgtaaatattttgacaaatat
tgtttcgaTTGACTtggaattttttccataatcagacatacggacttgct
atctgaaaatatcagttagaaagtgagacaccccgcggtgtagcgcggta
tttcaaatgaaaaagtactatttataatcttagagaagaaacttctCATA
ACTTtacaatgaaaacaatgtttctcatttttttaaatcgtcattcacca
atgttttacagacccttttgataattaaaagtttttaatcgtgaacgata
aatgcagcagcatttaaaattcatatcaaattttaatgtcagggacagag
ataaaacaaggcttttttaaatgtgcgttatccccTTATACCGAAATCGA
TCTGCTCTTTAGGTTGACAAAACTAATGTATGGTCTTGGAATAATATAGA
ATGTGGCTATTTTGAGCGATTATTGACATAGCAAAAAGCTAAGAGATTTT
CTTTGCTTGATTATCATTATACTTTTACACTAAAACTTTTCTGAATCTTT
CGATGTCATATAACAAGTTCCaaaatgttttagattcttcacactaagat
ttctaaaaaagtggTCCCTCAACCCTACTATCTAGTATAGGAGTTTGTTA
TTGTAAGTTAATGATCAATGGAATAAATTTATATACAGGTAACATCGTAA
TGGCTCCTACCCAACAGTCTTATGGTGGCCCAGTCGTGGTTTCCAGCAAT
CAAGCCTACTCACACCAAGCATACTCGCAACCGCAATCTCACACTGGTCA
GCCACAGCAATACAGTCAAGCAGCAATGCCATCAGCTAGTGGTGGTCAAG
TCACATATGGTAATGATTATCAGCAACAACCAAGACAAGAAGAACAAAAA
TTTATGCCTCCTCAAGATGTACCTCCAGCATATTCAAGAAACTAACCACA
ATTCGATGAATGGAAACCGTGTTTTttagccagaaacagctattttgtcc
agtttttgcgctttttgaagctcaatatctcgagttaggtactgaaatca
cctatacttgcaatatatctctaatcttcattttttgagaGCGTTCCAAA
AAtttacaacaggtctccgttttctcgaactaaaattttcattaattttt
aaccctatgatttttgcctgagaccgtcatatttgtccgaaaatcacacc
aaagtgtccgaaaaaaaattggaaacatcgtaatttcgattcccttaccc
cttagctttccaaaaatgtataacaagtgctttgatcaaaacatttgagc
gattttacaaaatgccctctactaataCCCCGATCAGAGAAAGAcaagaa
tttgtttttttctattctTCATCCACGAGAGCCTTCCCCTTCTTACCAAC
TGGCAGACATCAAATTGGGCAAGAGGTTTGTAAACCTAGGCTGGGTAAAT
AGTAAATAGAAATTGAAATATGTAGTAAGTagtgttttattttttagccA
TATACtattctttgaaaattattgaaattaatTGTCAGTGCGACTAAGCA
GACGTTCTTAAATAAATCGTGA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_015620XLOC_015620Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00027678-exon-sc0000639-1491911889:104401..104615TCONS_00027678-exon-sc0000639-1491911889:104401..104615Clytia hemisphaericaexon
TCONS_00027678-exon-sc0000639-1510915933:104401..104615TCONS_00027678-exon-sc0000639-1510915933:104401..104615Clytia hemisphaericaexon
TCONS_00027678-exon-sc0000639-1575043694:104401..104615TCONS_00027678-exon-sc0000639-1575043694:104401..104615Clytia hemisphaericaexon
TCONS_00027678-exon-sc0000639-1491911889:105729..105836TCONS_00027678-exon-sc0000639-1491911889:105729..105836Clytia hemisphaericaexon
TCONS_00027678-exon-sc0000639-1510915933:105729..105836TCONS_00027678-exon-sc0000639-1510915933:105729..105836Clytia hemisphaericaexon
TCONS_00027678-exon-sc0000639-1575043694:105729..105836TCONS_00027678-exon-sc0000639-1575043694:105729..105836Clytia hemisphaericaexon
TCONS_00027678-exon-sc0000639-1491911889:114251..114398TCONS_00027678-exon-sc0000639-1491911889:114251..114398Clytia hemisphaericaexon
TCONS_00027678-exon-sc0000639-1510915933:114251..114398TCONS_00027678-exon-sc0000639-1510915933:114251..114398Clytia hemisphaericaexon
TCONS_00027678-exon-sc0000639-1575043694:114251..114398TCONS_00027678-exon-sc0000639-1575043694:114251..114398Clytia hemisphaericaexon
TCONS_00027678-exon-sc0000639-1491911889:114771..115000TCONS_00027678-exon-sc0000639-1491911889:114771..115000Clytia hemisphaericaexon
TCONS_00027678-exon-sc0000639-1510915933:114771..115000TCONS_00027678-exon-sc0000639-1510915933:114771..115000Clytia hemisphaericaexon
TCONS_00027678-exon-sc0000639-1575043694:114771..115000TCONS_00027678-exon-sc0000639-1575043694:114771..115000Clytia hemisphaericaexon
TCONS_00027678-exon-sc0000639-1491911889:116139..117022TCONS_00027678-exon-sc0000639-1491911889:116139..117022Clytia hemisphaericaexon
TCONS_00027678-exon-sc0000639-1510915933:116139..117022TCONS_00027678-exon-sc0000639-1510915933:116139..117022Clytia hemisphaericaexon
TCONS_00027678-exon-sc0000639-1575043694:116139..117022TCONS_00027678-exon-sc0000639-1575043694:116139..117022Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000639supercontigsc0000639:104401..117022 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
1.3589	1.04903	1.03268	0.0949047	5.32243	3.38997	4.44558	5.24351	1.78482	1.82245	2.13123	1.21284	1.33411	1.19679	0.600572	0.88257	0.23427	0.631816	0.182957	0.188779	0.499203	1.91804	0.179975	1.35587	2.24179	3.67841	1.0525	0.0129882	1.309	0.986526
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00027678 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
back to top