TCONS_00027660 (transcript) - C. hemisphaerica

Overview
NameTCONS_00027660
Unique NameTCONS_00027660
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1882

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00027660 ID=TCONS_00027660|Name=TCONS_00027660|organism=Clytia hemisphaerica|type=transcript|length=1882bp
GATTTTATAAGATATGGAGTCATCTCAGGAAACTTATGACCGTTTGTACT
TAAAAAACTCCGTCAGTCGACGATGTCGCTGTGGCGATAAAATCGAAACA
TGTCGAAGCGGATATTGTTCTGACATCTACAAAACAGAGCAATCAAACGG
GATAGTCCGATGCACGGGCTGTAATGAAATACTGTTCGGTTCAGTATTGA
TGTCAGGTACGCCGAGCAGATGTGGAAAGTGCCATCAATACCCGTACGAT
CCATGTCCGAATGATGATGAACTCAGAGTTGAAATTTTAGCTCATAGAAC
TCAAGAAGGATTGCGCCGTCTTTATCAACCAAAGATTTGTTGTTTCAATG
TTAAATTTTCAGAAGAGGTATTAGTATTTAGTCTCCAGCAAGAAATCAAA
GAATATACCGACATACCGTGCTCAAACCAACTTCTTTTTGACCCGTACAC
CGAGGTACCAGAGCCTTTTTATGACACCAATTTAATGAAACCTATATTAA
AAACGAGATATATAATTGAACAAAGAGATGTTTTTATTCCAGGAGAAGAT
AATTTTGAACAGCAGAAAACCATTAAAGTGCTCCAATTAAATTTAGCAGT
ACTCGACAATGATCAGTTAGAAGCACCAGTTAGAAATATCAGTAAAATGA
AAAACCTATCCATCTGGAAACGTTTGACAGTTAAAGCTTTCGGCTCACAT
AAAGTACTACCAGTTTTCATGTGCCAAAACTTTAATAAAGCTCGTCTTAA
TCATTTAATacatgaaaaatggaaaatcccAATCTCAGAACAAATTTTAA
TTGCTATGGGAAAAGAAGTAAAGCCTAGCGACGTCTTTAGCGACAATGTG
GTCATTTATTTGGCAGTTACCGATAGGTTTAAAGATAACTTGTTCACCCT
TCGGCTCGGTATCAAGAAATTTGATGTGTTCACATTAAAGTTTTTAACGA
GAGAGGAAGATTTGAGTACACACCAATTTAAATTTGTAAAAGACGTCAAA
AGATATATACACCAAAAGTACAAAATCAGACCGGATGATCAAACACTGGT
TTTCAGAAACCGACAGCTTAAAGTAGACCAACCTTTATTCGATCTTCATA
TAGAAGAAAACTCTATGAAGCCTATAGCTTTGAATGTGATTGTTGTTGAA
GAAAGTTTCATCTTAAAAGTATTCCAAAATATGATCGCGTATGAAGATAC
ATTCACTGTTCTAGTAAAAAATTCTTATACAATTTCAACAATCAAAAGAT
GTATTGAAGCTAGAACAGGGGTCCCGTTTAAATACAGACAACTTTATATT
GGTACAACAGTACTGGATGATGATGAGAAAACTCTTCAAGATTACATGTT
TACTCTAGAGTGGCCTTAtctcaaaaatttcttatttgatACAGAATGGC
CTGATCTTGTTCTCAAACAAAAGTTAATGATACGACTTCATTTCGTAGAT
GCCGATGAAAAGGTGGAATATTCTGAgattattgacaaaaattgcCCGAA
AACAGTCAAAGATTTGACCAAAGAAATTCTGCAATTGCACAGTTTAAAGA
AATGTCAACTGCTCGAAATCAGGGATGAAAACGAGGTCAAGATTGATCTA
AAGACACGTGATTTGCTAGTGACAGTCAACGAGTTAagtttgtttataaa
taaagatgctGCTTGCACTTGCAGATTGATGTAAATGACCTTGACTTTTC
GTTACTAGTTAGCAATGCTAAACCAAAATAGAAACTCGGacttttgaaaa
tgataatATGTAcgtttttatttgttaaaaaatctgaaaatctttttagC
GAGACATATACCTTGAAAACGGCTCTGGtcaaaacatttttggaaatttg
tagcATCTAATGAAACTTGTAATAACTTTGCA
Run BLAST on NCBI

protein sequence of TCONS_00027660-protein

>TCONS_00027660-protein ID=TCONS_00027660-protein|Name=TCONS_00027660-protein|organism=Clytia hemisphaerica|type=polypeptide|length=556bp
MESSQETYDRLYLKNSVSRRCRCGDKIETCRSGYCSDIYKTEQSNGIVRC
TGCNEILFGSVLMSGTPSRCGKCHQYPYDPCPNDDELRVEILAHRTQEGL
RRLYQPKICCFNVKFSEEVLVFSLQQEIKEYTDIPCSNQLLFDPYTEVPE
PFYDTNLMKPILKTRYIIEQRDVFIPGEDNFEQQKTIKVLQLNLAVLDND
QLEAPVRNISKMKNLSIWKRLTVKAFGSHKVLPVFMCQNFNKARLNHLIH
EKWKIPISEQILIAMGKEVKPSDVFSDNVVIYLAVTDRFKDNLFTLRLGI
KKFDVFTLKFLTREEDLSTHQFKFVKDVKRYIHQKYKIRPDDQTLVFRNR
QLKVDQPLFDLHIEENSMKPIALNVIVVEESFILKVFQNMIAYEDTFTVL
VKNSYTISTIKRCIEARTGVPFKYRQLYIGTTVLDDDEKTLQDYMFTLEW
PYLKNFLFDTEWPDLVLKQKLMIRLHFVDADEKVEYSEIIDKNCPKTVKD
LTKEILQLHSLKKCQLLEIRDENEVKIDLKTRDLLVTVNELSLFINKDAA
CTCRLM
Run BLAST on NCBI

transcript from alignment at sc0000638:118813..126687-

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00027660 ID=TCONS_00027660|Name=TCONS_00027660|organism=Clytia hemisphaerica|type=transcript|length=7875bp|location=Sequence derived from alignment at sc0000638:118813..126687- (Clytia hemisphaerica)
GATTTTATAAGATATGGAGTCATCTCAGGAAACTTATGACCGTTTGTACT TAAAAAACTCCGTCAGTCGACGATGTCGCTGTGGCGATAAAATCGAAACA TGTCGAAGCGGATATTGTTCTGACATCTACAAAACAGAGCAATCAAACGG GATAGTCCGATGCACGGGCTGTAATGAAATACTGTTCGGTTCAGTATTGA TGTCAGGTACGCCGAGCAGATGTGGAAAGTGCCATCAATACCCGTACGAT CCATGTCCGAATGATGATGAACTCAGAGTTGAAATTTTAGCTCATAGAAC TCAAGAAGGATTGCGCCGTCTTTATCAACCAAAGATTTGTTGTTTCAATG TTAAATTTTCAGAAGAGGTATTAGTATTTAGTCTCCAGCAAGAAATCAAA GAATATACCGACATACCGTGCTCAAACCAACTTCTTTTTGACCCGTACAC CGAGGTACCAGAGCCTTTTTATGACACCAATTTAATGAAACCTATATTAA AAACGAGATATATAATTGAACAAAGAGATGTTTTTATTCCAGGAGAAGAT AATTTTGAACAGCAGAAAACCATTAAAGTGCTCCAATTAAATTTAGCAGT ACTCGACAATGATCAGTTAGAAGCACCAGTTAGAAATATCAGTAAAATGA AAAACCTATCCATCTGGAAACGTTTGACAGTTAAAGCTTTCGGCTCACAT AAAGTACTACCAGTTTTCATGTGCCAAAACTTTAATAAAGCTCGTCTTAA TCATTTAATACATGAAAAATGGAAAATCCCAATCTCAGAACAAATTTTAA TTGCTATGGGAAAAGAAGTAAAGCCTAGCGACGTCTTTAGCGACAATGTG GTCATTTATTTGGCAGTTACCGATAGGTTTAAAGATAACTTGTTCACCCT TCGGCTCGGTATCAAGAAATTTGATGTGTTCACATTAAAGTTTTTAACGA GAGAGGAAGATTTGAGTACACACCAATTTAAATTTGTAAAAGACGTCAAA AGATATATACACCAAAAGTACAAAATCAGACCGGATGATCAAACACTGGT TTTCAGAAACCGACAGCTTAAAGTAGACCAACCTTTATTCGATCTTCATA TAGAAGAAAACTCTATGAAGCCTATAGCTTTGAATGTGATTGTTGTTGAA GAAAGTTTCATCTTAAAAGTATTCCAAAATATGATCGCGTATGAAGATAC ATTCACTGTTCTAGTAAAAAATTCTTATACAATTTCAACAATCAAAAGAT GTATTGAAGCTAGAACAGGGGTCCCGTTTAAATACAGACAACTTTATATT GGTACAACAGTACTGGATGATGATGAGAAAACTCTTCAAGATTACATGTT TACTCTAGAGTGGCCTTATCTCAAAAATTTCTTATTTGATACAGAATGGC CTGATCTTGTTCTCAAACAAAAGTTAATGATACGACTTCATTTCGTAGAT GCCGATGAAAAGGTGGAATATTCTGAGATTATTGACAAAAATTGCCCGAA AACAGTCAAAGATTTGACCAAAGAAATTCTGCAATTGCACAGTTTAAAGA AATGTCAACTGCTCGAAATCAGGGATGAAAACGAGGTCAAGATTGATCTA AAGACATGTGATTTGCTAGTGACGGTCAATGAGTTAAGTTTGTTTATAAA TAAATATGCTGCTTGCACTTGCAGATTGATGTAAATGACCTTGACTTTTC GTTACTAGTTAGCGATGCTAAACCCAAAATAAAAACTCGGACTTTTGAAA AGGATACTATCTACGTTTTTATTTGTTAAAAAATCTGAAAATCTTTTTTG CGAGAATTATACAGTTTTGGAAATTTGTAGCATCTAATGAAACTTGTAAT AACTTGTAATAGAACGCATACAAAACAACTATGTAATAGAAACTTTTTTA AATCAAATTTCCACATACAATTACAAGCACAAGTTGAGTATTTGAGTTAT TTTTTTCTAGTTTTACTATTAAAATTATTGTTAAATTATTCCAACATTAA ATAAATAGATATTCATATCCATCCTTAACCCTATTTTTATCGGGGGGGGG GGGGGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTACTT TTTTGTGCAGGCATATCATAAAATCCAGCTAAAACCCTGTAAAATCCAAA AATCTTAAATTTAGCATAACTTTTGATCTAGGCATCCAACTGAAATCAAA TTTTGACAGGTTTTAGGTATCAATGATAAATTTTAAAATTATTTTAAAAA TTTTCAAAAACTGCTGACATCATCAAAAATGACGTCATTGTTTTTTGAAA AAATTTACTCAATTTCTGCATGGATTTTAAGCCTCGATTTTATTAGTATG TTAAAAACCGGCAAATCTATTAAAGATATTCTTTTTGGCTTTTAGAAATT TAAAACAGAATTGAAAAATCTCCATTCGTTCAACTTTAATTACTATTTTA TTGAATAGTACTTTTTCATTGGTCAGCGATAATTGTGAAACTTTGTGATA ACATCATCATCCTTATGATGACGTCATCAACCCAAATTTTTTTCTATGAA CTCTTTTTATAGCAGAGAACATTTGTGCCAATTTTCAAGTCCATACCTTC TCTAGATCAAAAGTTATGCAAGGCTGGTGGAAAACACCCCCCTTTAGAAT ACAAAATCCGAAAAAGCCTGATAATAATAGGGTTAACGGTCCATGGAAAA GGTTGTCGCCCCTTATATGTTAGATGCATGCATCTATTGGATGGTAATAT CCAAGTAGTGATCCGGGGGGGCACTCAAATGGTCCGACCTATGGCATGTG CCGCCCTTAAGGGTAGGTTTTTCGAGACCCTAGAAATGCACTGTAAAGGG CATAGTTTTGAAAAAATGCCCTACAAGGGTTTTCTTTTAGCTGGATACAC TGTAAGGGTGTGTTTAGGATTGCTGAGTTGCAAGTCTAACAGTAAAAATC TGATATATCTTTATAGTTTTGACTCTTGCCTCGGGTGAAAAATGCTTATA ATGACACGAAATTTTGAATTGGGAATATCTTTCCAATATTTCTCTGAGAA CAGCTGAGATTGACATGTAGGATGTGAGTCTCATAGCTCCACTGTGGTGG ATTTTTTCAGGTTGAAGTTTAGAAATTTCTGGTGTCAAATATTTAATTTC TTATACATAGCATCTTTTTGCATCTTCCTTGCATTTTAAAACGGCATAAC GACGCATAATTAGGAATTAACTAGATGAGTTTGACTATCAAAGGAGAACT TAAAAGCTTGTTTAGGAATTAGGTGATTGTATTTTGATGAGAAATGCAAT TAAAATGCTACGAAGATTCATGTTAATGGTGGAAGGAGGGTGAACAATAA TGCCATTACTGCGGACAAGGATTGTACATGAGAAATTGGCAGAAATCAGC AAGTTGTTTTTCCAGTGTCTATAATAATTCCTTGATAAAGGGACGGTTCT AAAAATATAGGGTCCTTTAAATACCTCAAATATAAGGTATCGTGCCGAAC TGACGACAGCCGTTTGTTTATGAGAGAAAGGGGGCTTTCACAACTAGCTG TTTGAAAATTGAAAAACAAAGGAGTGCACAGGCAAAGGAAAAACAAGCTG TCAATTTCATGGAAAGTTTATATTAAATGATATTTTTAAATGTGAAAAAA CAAACGAACACTATTGTGCTTTAACAAAATACATCAATTTTTGTGCTTTT CAACGTCATTAAAGAGGCCCCCCAGCAGACCCTCAATTCACGCAATCACG CAATTTTTTTTCGAAATTCACGCATTCACGCAAATTTTCCTCGAGTTTCA TGCAATAACCCGATTTTTCAGGAAATCAGAAATTTTTTGGGAAACATTGG ATAATCGGGAAAACTGCACATGATCGGTGGAAAAAAGAGAAAATTCACGT ATTCAAGCACAAAATAGCCCAGATTCACGCATTCACGCAATTAAAAAGTG AATTTTCACGTTCACGCTAGTTTTTTCAATTCACGCATTCACGCATTTTT TTCCCAATTTTCATTTTCACTCATCTTCACTCCATTTATTTAAAATTATT TAAAATTATCACTCCTTAGGAAAGGCCACTGTCTCTCTCGATTAAAACAT CACACAAATTTATTACTCAATACCACCTTATCAATCTTATCTAAGTTTAT CTTTCCAATCACCCTTTGATCAAATATCCACCTTTTACACATTTAGCCAC CACAAATACATAAATGAAAATAGCTTTCGGACTTTGGCAAAGTCAAAAAA ACTCTCTACACCACACCTCACTTCACGATTTGTTTTATGGCTCACAGGAA GTACTCCGCCTAAGATGTCCTCATTGACGTCTTAACCCTTTTCCAAAATT TTTTCCAGGCTATATCCCATCCCCTTCCTTAAAGTGTAGCTTTTTTCTTA AGGGTCTACGCTTTACTTTTGCTTTGATCATGTGTTATGTACTGACTAAT AATGATTCATCACTTTTAGTTTTGTATTGTTTGTGACGTCATTCCCCTAT CATTCTAATTTCAATGTTCGTCTCATTTATCCATGTTCATTATGCCACAT TATGCTTAGAGCAGTTAAATTGATTTACTTTAAGCGAGACAATAATTTCA CAGCTGTTTTAAAACGCATGCGTAAACATTTTGTTTTTTACTAAAACGAT TTTGATAGTAAAATCAGTAGTGCCTCGAATTGAATTTGCATGACCTGTAA GACAAAACAACGATAAAGTAGCTTTTAAAGAGGTAAGGTTCACTCGACCA TTTTACTCGACTTTATAATTTCGTATACCTGCTCTATTCTTGCTCTATTT TATCAGAGACAGTTCTCCATCACAGGGTGTAAAGTAATAAGCCATCGACC TTGCCCTTCTACGACTAAACGAAAAAATGGACAAAGTGAAAATTATTTTC TTAGTGAACACTGCAAAACAAAAGGTTCTTTCTCCGATGATTTTGTCGGA AATAAGCGTTCGCCAACAGTGTGTTTGAAACACGCTGACCTAGTTTTTAA TCATGGGAGCAAATTAAGAAACATTTTACAGTCTAATTAATTTTATTAAT CTTCTCATTCTGTTGCTGTTGCCTACAGTGCTGTATACTTCTGCAATAAT ATGTTGTCTTAAGTAAGCAGTCATAATAGACTTAAATCACATAAATCTTA CTCCTATTATGTGACGTTGATTTATAATGAACCATCCATTTAACGTGGGC ATCTTTTTATATCTCTGTGAATCAGTCATACGATATAATAATTTTGTCCC CCTTTTAGTGATTTTATATTTCCGTATTTCAAAGGGCTTTCCATCAAACA GAAGCTTCTTGTATCGTATTGATGTTTTTATTAAATTCGCTAACAAGCTA ATTTTTCTTTTTTCGATCATGACTTTGGTACGTTTTCAACAATTGGATGA ACCGCGTTTTTAGAAAGAATCACAATACACGGTTGCTTCAGTTTTTCAAT TGAGTCATCTATATTCAATATAAGACACTATTTATTCTGTGACCACGTTG ATTGAAACAATTCCCGATTGTTTTATTATCTTATCATATCGTGATTTCTC CAGCAAAATGACATTGAAAGAATAGCAGAAATCGATCTCCAGTCAGCGTG ATAACGAAACTATTATGTGATTTTATAAGATATGGAATCATCTCTTGAAA CTTATGACCGTTTGTACTTAAAAAACTCCGTCAGTCGAAGATGTCGCTGG AGCGGTAAAATCGAAACATGTCCAAGCACTTATTGTCTTGGCATCTACAA AACAGGACAATCAAACAGGATAGTCCGATGCACGGGCTGTAATGAAATAC TGTTCGGTTCAGTATTGATGTCGGATACGCCGAACAGATGTGGGAAGTGC CATCAATACCCGTACGATCCATGTCCGAATGATGATGAACTCAGAGTTGA AATTATAGCTTATAGAAATCAAGAATGGTGTCGTCCTTTTAAACAAAAGA TTTGTTGTTTCAATGTTAAATTTTCAGAAAAGGTGCTAGTGTCAAGTCTC CAGCTAGAAATAGAAGAATATACCGATATACCGTGCTCAGATCAACTTCT TTTTGAACCATACACCAAAGTACCGGAGCCTTTTTACGACACCAATTTAA TGAAACCTATATTAGAAACGAGATATATAATTGAACAAAGAGATGTTTTT ATCCCAGGAGAAGATAATTTTGAACAAAAGAAAACCATTAAAGTGCTCCA ATTACATTTAGCAGTACTCGACAACGATCAGTTAGAAGCACCAGTTAGAA ATACCAGTAAAATGAAACACCTATCCATTTTGAAACGTTTGACAGTTAAA GCTTTCGGCTCACATAAAGTACTACCAGTTTTCATGTGCCAAAACTTTAA TAAAGCTCGTCTTAATTATTTAATTTGTGCGAAATTGAAAATCCCAATCT CAGAACAAATTTTAATTGCTATGGGAAAGGAAGTAAAACCTAGCCACTAC ACCTTTACCGGCAATGCGATCATTTATTTGGCTGTTACCGATAGGTTTGA TAACTTGTTCACCCTTGGGCTCGGTATCAAGAAATTTGATGTATTCACAT TAAAGTTTTTAACGAGAGAGGAAGATTTGAGTACACACCAATTTAAATTT GTAAACGACGTCAAAAGATATATACAACAAAAAGTACAAAATCAGACCGG ATGATCAAACACTGGTTTTCAGAAACCGACAGCTTAAAGTAGATCAACCT TTATTCGATCTTCATATAGAAGAAAACTCTATGAAGCCTATAGCTTTGAA TGTGATTGTCGTTGAAGAAAGTTTCCTCTTAAAAGTATTCCAAAATATGA TTGCGTATGAAGATACATTCACTGTTCTAGTAAAAAATTCTTATACAATT CCAACAATCAAAAGATGTATTGAAGCTAGAACAGGGGTCCCGTTTAAATA CAGACAACTCTATATTGGTCAAATTGCACAGTATGACGATGAGAAAACTC TCCAAGATTATATGTTTACTCCAGGATGGCCTGATCTTGTTCTCAAACAA AAGTTAATGATACGACTTCATTTCGTAGATACTGGTGAAAAGGTGGAATA TTCTGAGATTATTGACAAAAATTGCCAGAAAACAGTCAAAGATTTGACCA ATGAAATTCTGCAATTGCACGGTTTAAAGAAATGTCAACTGCTCGAAATC AGGGATGAAAACGAGGTCATTATTGATCTAAAGACATGTGATTTGCTAGT GACAGTCAACGAGTTAAGTTTGTTTATAAATAAAGATGCTGCTTGCACTT GCAGATTGATGTAAATGACCTTGACTTTTCGTTACTAGTNCTAAAGACAC GTGATTTGCTAGTGACAGTCAACGAGTTAAGTTTGTTTATAAATAAAGAT GCTGCTTGCACTTGCAGATTGATGTAAATGACCTTGACTTTTCGTTACTA GTTAGCAATGCTAAACCAAAATAGAAACTCGGACTTTTGAAAATGATAAT ATGTACGTTTTTATTTGTTAAAAAATCTGAAAATCTTTTTAGCGAGACAT ATACCTTGAAAACGGCTCTGGTCAAAACATTTTTGGAAATTTGTAGCATC TAATGAAACTTGTAATAACTTTGCA

Coding sequence (CDS) from alignment at sc0000638:118813..126687-

>TCONS_00027660 ID=TCONS_00027660|Name=TCONS_00027660|organism=Clytia hemisphaerica|type=CDS|length=3342bp|location=Sequence derived from alignment at sc0000638:118813..126687- (Clytia hemisphaerica)
ACGTGATTTGCTAGTGACAGTCAACGAGTTAAGTTTGTTTATAAATAAAG
ATGCTGCTTGCACTTGCAGATTGATGTAAATGGAGTCATCTCAGGAAACT
TATGACCGTTTGTACTTAAAAAACTCCGTCAGTCGACGATGTCGCTGTGG
CGATAAAATCGAAACATGTCGAAGCGGATATTGTTCTGACATCTACAAAA
CAGAGCAATCAAACGGGATAGTCCGATGCACGGGCTGTAATGAAATACTG
TTCGGTTCAGTATTGATGTCAGGTACGCCGAGCAGATGTGGAAAGTGCCA
TCAATACCCGTACGATCCATGTCCGAATGATGATGAACTCAGAGTTGAAA
TTTTAGCTCATAGAACTCAAGAAGGATTGCGCCGTCTTTATCAACCAAAG
ATTTGTTGTTTCAATGTTAAATTTTCAGAAGAGGTATTAGTATTTAGTCT
CCAGCAAGAAATCAAAGAATATACCGACATACCGTGCTCAAACCAACTTC
TTTTTGACCCGTACACCGAGGTACCAGAGCCTTTTTATGACACCAATTTA
ATGAAACCTATATTAAAAACGAGATATATAATTGAACAAAGAGATGTTTT
TATTCCAGGAGAAGATAATTTTGAACAGCAGAAAACCATTAAAGTGCTCC
AATTAAATTTAGCAGTACTCGACAATGATCAGTTAGAAGCACCAGTTAGA
AATATCAGTAAAATGAAAAACCTATCCATCTGGAAACGTTTGACAGTTAA
AGCTTTCGGCTCACATAAAGTACTACCAGTTTTCATGTGCCAAAACTTTA
ATAAAGCTCGTCTTAATCATTTAATACATGAAAAATGGAAAATCCCAATC
TCAGAACAAATTTTAATTGCTATGGGAAAAGAAGTAAAGCCTAGCGACGT
CTTTAGCGACAATGTGGTCATTTATTTGGCAGTTACCGATAGGTTTAAAG
ATAACTTGTTCACCCTTCGGCTCGGTATCAAGAAATTTGATGTGTTCACA
TTAAAGTTTTTAACGAGAGAGGAAGATTTGAGTACACACCAATTTAAATT
TGTAAAAGACGTCAAAAGATATATACACCAAAAGTACAAAATCAGACCGG
ATGATCAAACACTGGTTTTCAGAAACCGACAGCTTAAAGTAGACCAACCT
TTATTCGATCTTCATATAGAAGAAAACTCTATGAAGCCTATAGCTTTGAA
TGTGATTGTTGTTGAAGAAAGTTTCATCTTAAAAGTATTCCAAAATATGA
TCGCGTATGAAGATACATTCACTGTTCTAGTAAAAAATTCTTATACAATT
TCAACAATCAAAAGATGTATTGAAGCTAGAACAGGGGTCCCGTTTAAATA
CAGACAACTTTATATTGGTACAACAGTACTGGATGATGATGAGAAAACTC
TTCAAGATTACATGTTTACTCTAGAGTGGCCTTATCTCAAAAATTTCTTA
TTTGATACAGAATGGCCTGATCTTGTTCTCAAACAAAAGTTAATGATACG
ACTTCATTTCGTAGATGCCGATGAAAAGGTGGAATATTCTGAGATTATTG
ACAAAAATTGCCCGAAAACAGTCAAAGATTTGACCAAAGAAATTCTGCAA
TTGCACAGTTTAAAGAAATGTCAACTGCTCGAAATCAGGGATGAAAACGA
GGTCAAGATTGATCTAAAGACACGTGATTTGCTAGTGACAGTCAACGAGT
TAAGTTTGTTTATAAATAAAGATGCTGCTTGCACTTGCAGATTGATGTAA
ATGGAGTCATCTCAGGAAACTTATGACCGTTTGTACTTAAAAAACTCCGT
CAGTCGACGATGTCGCTGTGGCGATAAAATCGAAACATGTCGAAGCGGAT
ATTGTTCTGACATCTACAAAACAGAGCAATCAAACGGGATAGTCCGATGC
ACGGGCTGTAATGAAATACTGTTCGGTTCAGTATTGATGTCAGGTACGCC
GAGCAGATGTGGAAAGTGCCATCAATACCCGTACGATCCATGTCCGAATG
ATGATGAACTCAGAGTTGAAATTTTAGCTCATAGAACTCAAGAAGGATTG
CGCCGTCTTTATCAACCAAAGATTTGTTGTTTCAATGTTAAATTTTCAGA
AGAGGTATTAGTATTTAGTCTCCAGCAAGAAATCAAAGAATATACCGACA
TACCGTGCTCAAACCAACTTCTTTTTGACCCGTACACCGAGGTACCAGAG
CCTTTTTATGACACCAATTTAATGAAACCTATATTAAAAACGAGATATAT
AATTGAACAAAGAGATGTTTTTATTCCAGGAGAAGATAATTTTGAACAGC
AGAAAACCATTAAAGTGCTCCAATTAAATTTAGCAGTACTCGACAATGAT
CAGTTAGAAGCACCAGTTAGAAATATCAGTAAAATGAAAAACCTATCCAT
CTGGAAACGTTTGACAGTTAAAGCTTTCGGCTCACATAAAGTACTACCAG
TTTTCATGTGCCAAAACTTTAATAAAGCTCGTCTTAATCATTTAATACAT
GAAAAATGGAAAATCCCAATCTCAGAACAAATTTTAATTGCTATGGGAAA
AGAAGTAAAGCCTAGCGACGTCTTTAGCGACAATGTGGTCATTTATTTGG
CAGTTACCGATAGGTTTAAAGATAACTTGTTCACCCTTCGGCTCGGTATC
AAGAAATTTGATGTGTTCACATTAAAGTTTTTAACGAGAGAGGAAGATTT
GAGTACACACCAATTTAAATTTGTAAAAGACGTCAAAAGATATATACACC
AAAAGTACAAAATCAGACCGGATGATCAAACACTGGTTTTCAGAAACCGA
CAGCTTAAAGTAGACCAACCTTTATTCGATCTTCATATAGAAGAAAACTC
TATGAAGCCTATAGCTTTGAATGTGATTGTTGTTGAAGAAAGTTTCATCT
TAAAAGTATTCCAAAATATGATCGCGTATGAAGATACATTCACTGTTCTA
GTAAAAAATTCTTATACAATTTCAACAATCAAAAGATGTATTGAAGCTAG
AACAGGGGTCCCGTTTAAATACAGACAACTTTATATTGGTACAACAGTAC
TGGATGATGATGAGAAAACTCTTCAAGATTACATGTTTACTCTAGAGTGG
CCTTATCTCAAAAATTTCTTATTTGATACAGAATGGCCTGATCTTGTTCT
CAAACAAAAGTTAATGATACGACTTCATTTCGTAGATGCCGATGAAAAGG
TGGAATATTCTGAGATTATTGACAAAAATTGCCCGAAAACAGTCAAAGAT
TTGACCAAAGAAATTCTGCAATTGCACAGTTTAAAGAAATGTCAACTGCT
CGAAATCAGGGATGAAAACGAGGTCAAGATTGATCTAAAGAC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_015607XLOC_015607Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00027660-proteinTCONS_00027660-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00027660-exon-sc0000638-1575043694:125083..126687TCONS_00027660-exon-sc0000638-1575043694:125083..126687Clytia hemisphaericaexon
TCONS_00027660-exon-sc0000638-1575043694:118813..119089TCONS_00027660-exon-sc0000638-1575043694:118813..119089Clytia hemisphaericaexon
TCONS_00027660-exon-sc0000638-1510915933:125083..126687TCONS_00027660-exon-sc0000638-1510915933:125083..126687Clytia hemisphaericaexon
TCONS_00027660-exon-sc0000638-1510915933:118813..119089TCONS_00027660-exon-sc0000638-1510915933:118813..119089Clytia hemisphaericaexon
TCONS_00027660-exon-sc0000638-1491911889:125083..126687TCONS_00027660-exon-sc0000638-1491911889:125083..126687Clytia hemisphaericaexon
TCONS_00027660-exon-sc0000638-1491911889:118813..119089TCONS_00027660-exon-sc0000638-1491911889:118813..119089Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000638supercontigsc0000638:118813..126687 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.0274116 0.0323346 0 0 0 0.0225982 0.0272637 0.051048 0 0 0 0 5.71959 3.19738 0.0446429 0.190903 0.0194621 0.0484253 5.14305 6.20025 0 0 0 0 0.591655 0.270025 0.0448555 0.0675043 0 0.0239806
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR000626Ubiquitin_dom
IPR029071Ubiquitin-rel_dom
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00027660 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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