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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00027651 ID=TCONS_00027651|Name=TCONS_00027651|organism=Clytia hemisphaerica|type=transcript|length=362bp
GTAGATACCCTCGAAAAGGACATCCTCTCTGTCCAGACGGCTATCTTTGC
ATGTCGATATTATCTTGTCAGTATATCAACGGATGGCGGGCCACCACAAA
GAAAGAGATGCACCGCCCCATACCCTGGAACAAGTGCTTGTCCTGAAGGT
TACGAGTGTATGAATAGTTTGAAATGTGATTGTGAATGTCCATACTATCC
ATTCACATTCTGTTGCCCGCCTTCTTTAACAGTACCTTACAACCCATATC
AAATGTCACAACTCCTGGAGAAAGCTGTTACCCATAGCAACAAGACAGGG
GTGACAGGGAAAGGATCGAAAACCGTAGTATCacctcaaaagaaaaagaa
attatcgACTGC Run BLAST on NCBI transcript from alignment at sc0000638:106981..108084+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00027651 ID=TCONS_00027651|Name=TCONS_00027651|organism=Clytia hemisphaerica|type=transcript|length=1104bp|location=Sequence derived from alignment at sc0000638:106981..108084+ (Clytia hemisphaerica)
GTAGATACCCTCGAAAAGGACATCCTCTCTGTCCAGACGGCTATCTTTGC
ATGTCGATATTATCTTGTCAGTGTGAGTGTCCTTCGTATGCACCGAGTTA
TTGCTGTCCTCCCTCCAAAATGGTTTATCCAATCAAAAATGTTAAAGAGC
TACAAGGAGTTTTATTTGAAGCTGCAAAGAATGATCCTATTGAAGGAAAG
AAATTCGGAAAATTGTTGCCAGCCATTATAAGCACAAAGAAGGTAAGAAA
AACATCCTGCGATATCTTAGCCTAGAGTCAACTTCTGGTTGAAATTTGCt
ttctaataatttttgatgacgctgagtccagtgaagtaatCTTAATTGcg
cttaatcgcgccatccagtctataaaaaaaatttaagtggaccccgggct
agcgATATCTTAACTATAAAACGGCCCCCTTTTCACcataaaatttcatg
tttttacttTCCTGAGGGTAGAACCTAAACTCCCTAGGATCATTTGAAAT
CTCCATTAATGCACTGGTAAGCCACAATTTTGTTCCAAATCTTGTTGGCA
GAATATAAATATCCTTCATGTGCATATGTTTCATCTGACCAATACTGTTA
ATCAAGAAACAAAATCTTATGTATCTTTTCTACTGTATACACGCACATTC
AACGTTGTAatatagtataagaaagccgcgacTTTAGATTGAACTAAATT
ATCTGTAGGGATTCGATTAAGACCCTAATCTTTGGTTCCCGCATACGGGG
TTTTCGGATCAAGCGCCCACCGCCCCTGGGCTtatctttttcatctttat
cTCTTCATCATTAGATATCAACGGATGGCGGGCCACCACAAAGAAAGAGA
TGCACCGCCCCATACCCTGGAACAAGTGCTTGTCCTGAAGGTTACGAGTG
TATGAATAGTTTGAAATGTGATTGTGAATGTCCATACTATCCATTCACAT
TCTGTTGCCCGCCTTCTTTAACAGTACCTTACAACCCATATCAAATGTCA
CAACTCCTGGAGAAAGCTGTTACCCATAGCAACAAGACAGGGGTGACAGG
GAAAGGATCGAAAACCGTAGTATCacctcaaaagaaaaagaaattatcgA
CTGC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00027651-exon-sc0000638-1491911889:106981..107052 | TCONS_00027651-exon-sc0000638-1491911889:106981..107052 | Clytia hemisphaerica | exon |
| TCONS_00027651-exon-sc0000638-1510915933:106981..107052 | TCONS_00027651-exon-sc0000638-1510915933:106981..107052 | Clytia hemisphaerica | exon |
| TCONS_00027651-exon-sc0000638-1575043694:106981..107052 | TCONS_00027651-exon-sc0000638-1575043694:106981..107052 | Clytia hemisphaerica | exon |
| TCONS_00027651-exon-sc0000638-1491911889:107795..108084 | TCONS_00027651-exon-sc0000638-1491911889:107795..108084 | Clytia hemisphaerica | exon |
| TCONS_00027651-exon-sc0000638-1510915933:107795..108084 | TCONS_00027651-exon-sc0000638-1510915933:107795..108084 | Clytia hemisphaerica | exon |
| TCONS_00027651-exon-sc0000638-1575043694:107795..108084 | TCONS_00027651-exon-sc0000638-1575043694:107795..108084 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000638 | supercontig | sc0000638:106981..108084 + |
Blast
The following BLAST results are available for this feature:
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