TCONS_00027619 (transcript) - C. hemisphaerica

Overview
NameTCONS_00027619
Unique NameTCONS_00027619
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2169

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00027619 ID=TCONS_00027619|Name=TCONS_00027619|organism=Clytia hemisphaerica|type=transcript|length=2169bp
aacgattttaaaaacagTTTAATGATGAGTTTGAATGTTTTACCAaccga
aattttgaaaatggtgaTATCGTATCTTGGTAAAAGAGACGCCAAAAGCT
TGGCTGTTGCTTCAAGAAAATTGCGTGAAATAGCGTTGGAAAAGATATGG
TCAAAACCGATCTACCAGAAATCGAAAGGATTGAGGTTTTTGAAGATGAT
TTCGCGTTTCCCGATTGATCAAATTCGTGTCAAAGATTTTCGATGCAAGA
TGGAGGAAGTCATTGAAACCGTATCATCTTTAAAACGTTTGAACTTAGAT
TTGAGTTCTAAGTGTGTCTTTAGGACTCCTTTGGACTTGATACGTTTCAA
ATTCCCAATAGTCGCTCATACCAAGGCTTTGAAGATTGACTCGGAGAGTA
AATTTGGTCTGCTTCTTGTTGCCCTGGAGACTGGGTTTGTTAAGGAATTA
ATTGTCGATCATCACAGTAAAAATCTTCGTTGGTCACCTGAGCTCCTTAA
AATGCTGGTCAGTAAAGTATACATTTCAGAAATCTCAGTCAATGCTCTCC
GATTCACGGATGAGAATGTTGAGGAATTTTGTCAGATTTTCTTATCTCTC
AGAAACTGTCAGGTATTTTTTCCTGAAGAAAAAGCATGGGAACAAGACCG
AATAGATGAGGAAGATTTGACACCGTCAAGGttagtaaaatcgaaaaaag
atCGCACTAAAAACAAATTTACTATCAATGATATCGAAACATTTGCAAGA
TATGATGTTAAGATTTCTTCCATGGCAGGTAGCAATAACATGTTAAACTT
GGATTTGAAGTACAATAAAGACATTTCAAAGCTATTGAAATTTGTACCAG
TTCTGAAACGGTTGCAATATTTACAATCTTTTAAACTGCGAGAAGATGGA
GAACCATTTAAATGGGATCTCTCAAAATTTGACCAATTGTCTGACTTGCC
CATCCGTAGAATCAGAACAAATATGTTAATCATCAGTAAAGAGAATGTTG
GCAACATCGTGGACACACTCTCCAAGATGAAATCATTGCAGCATCTACAT
ATTCTATGGAATCGCTTTAAATTGACACCGGAAGAATTTGCACTTTTTCA
AACCCTACCTGTAAAGATTGTTAATTTGACAGCTTTGGATTTGATGAAAG
AAAATGTCCCGAAATTTCGACAAATAATGAATgagatgaaaattgaaaaa
atcaactcCTCATTGCCAGTGAAAAAGAGGAATAAATTAGGAATTCGGTT
CCGTCAATTTGGACCTGGTGCGATGTTTTGGTCCATTTAAGCGAGGGATC
AATAAAGTTTTGTTATTTTGAGAGTCGGTCTCTTGTTGTCTGGGTAGTCT
ATactccattgagtttcaagcccgaagggctagaggcaaaactttaaccc
ttctcaggcaagagaaattgaagtcacttatttcccatccaaaacacgca
tagaacgcgccgtaatcacgacgacggattgtatctagcggttcctttgt
tttggaggactacatatttaaaatctagcgatagattttagtttcagccc
ggtgtttgtgtaaaaacttcgcgtgggcgttctggatgggaaataggtgg
ttttatttcccatccaggagtttcgcctctagcccttcgggcttgaaact
caatggtataCCCCATCCACTTAATaagtaaaatcttttttcaactATCA
AAAACTACAGTATAAAAGCACCGTTATCCGGATGATACTGTGCGTGGGCT
AAAATTCTTGAAATCAATGaaacaaaaggaaaaaagactttttgttGTTC
TGAGTCAGCGCTTTGGGAATCTGCGATAGCAGATTTATAAACTAGATGTG
TGAAAAATCATTACCCAGATGATGTCTTTGGATTTGGTCGTGTTTGTCAT
CTTTGTAAATACATTCGTGTTTTTGTACTTATTtattaaaatgaagaaat
gCTTATGAAGCGTAATGTTTTCTCAAGGACacttgtacagggtgtcccta
attaaagtatcgagtttgaacatgcgattgagtagaaaagtttgtgtgtg
tgttatcgctaaaatataagaacgttctccatcacacaggtttattacaa
aaggtagttacaatgtataaattaatcgtaatgacaaagaaaaaagaggg
agagcttaaaatacaattt
Run BLAST on NCBI

protein sequence of TCONS_00027619-protein

>TCONS_00027619-protein ID=TCONS_00027619-protein|Name=TCONS_00027619-protein|organism=Clytia hemisphaerica|type=polypeptide|length=429bp
NDFKNSLMMSLNVLPTEILKMVISYLGKRDAKSLAVASRKLREIALEKIW
SKPIYQKSKGLRFLKMISRFPIDQIRVKDFRCKMEEVIETVSSLKRLNLD
LSSKCVFRTPLDLIRFKFPIVAHTKALKIDSESKFGLLLVALETGFVKEL
IVDHHSKNLRWSPELLKMLVSKVYISEISVNALRFTDENVEEFCQIFLSL
RNCQVFFPEEKAWEQDRIDEEDLTPSRLVKSKKDRTKNKFTINDIETFAR
YDVKISSMAGSNNMLNLDLKYNKDISKLLKFVPVLKRLQYLQSFKLREDG
EPFKWDLSKFDQLSDLPIRRIRTNMLIISKENVGNIVDTLSKMKSLQHLH
ILWNRFKLTPEEFALFQTLPVKIVNLTALDLMKENVPKFRQIMNEMKIEK
INSSLPVKKRNKLGIRFRQFGPGAMFWSI
Run BLAST on NCBI

transcript from alignment at sc0000636:183882..190522-

Legend: exonCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00027619 ID=TCONS_00027619|Name=TCONS_00027619|organism=Clytia hemisphaerica|type=transcript|length=6641bp|location=Sequence derived from alignment at sc0000636:183882..190522- (Clytia hemisphaerica)
AACGGTACGTAAAATGTTACAATTGAAGCATTTGTTGGAAAACGGCAAGC
AAAACAAAGTGTATGGACTTTACTATTATAAAAATTAATTTTTAAATATT
GCAAATTTTTGCATGATCTTGTATCAAAACTTCTGTCAGTCTTGGACTTA
GCGTCATTTTGACGGTTGTCGTGAGAAAAATTGATATGCGAGGGACCCCT
AGTTCTCCCAGCTGTCCAAACACGTATGTAAATTTGAGTCATTCTAGTGT
GGTCGTGTTACAAAAGTACAGGCTGTTTGTAGGTAAAAAATAATATATAG
CTGAAACTTTCTCCAGACCTTCTCTATAGGATGCTTATGCCTCAGGAAAA
AATCCCCTAAAATCCCACTGGTGGAACATCCCTTTTTNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNATGC
AATTTTTGGTCAATTTTAGACCAAAATGTGGCGAAAAGTGGAACTTGCGC
ATGAAATATCTCGAGTTAGGTAATGAAATCGGCCATACCCGTTTAAAGGT
CTTCTGTATTGTTTTTTGAGAGCTTTCGAATGGTATACCTGATATTGTCT
GAAAATGAGTTTGAAATTTTCAAAACATTTCGCCCTTAGGGTTTTGCCTG
GGGAAAAAAGAAATTGCCCATCAAAAAGGGAATGTTCCACCAGTGGGATT
CTAGGGGATTTTTTTCCTGAGGCATAAGCATCCTATAGAGAAGGTCTGGA
GAAAATTTCAGCTATATATTATTTTTTTCCTGTAAATTATGCTAAAAAAC
GACCCCACTATTCTGTCGACAAGTAGAAATACCCTGTTTTCTTAGAAAGA
TGAAATGAAAAGTTTTCAAACTGTGCCAAATTATTATTTGGCCTCTTTTG
TATCTTGAAATTAACTTTTCATAGAATATTATTATAAAGCTCTCATATAT
GGGTTATCTATTTTGATCTTGGAATTTCGTCTTCATTTGGTAATTTTTTT
CGTTTCAGATTTTAAAAACATTTTAATGATGAGTTTGAATGTTTTACCGA
CCGAACTTTTGAAAATGGTGATATCGTATCTCGGTAAAAGAGACGCCAAA
AGCTTGGCTGTTGCTTCAAGAAAAATGCGTGAAATAGCGTTGGAAAAGAT
ATGGTCAAAACCGATCTACCAGAAATCGAAAGGATTGAGGTTTTTGAAGA
TGATTTCGCGTTTCCCGATTGATCAAATTCGTGTCAAAGATTTTCGATGC
AAGATGGAGGAAGTCATTGAAACCGTATCATCTTTAAAACGTTTGAACTT
AGATTTGAGTTCTAAGTGTGTCTTTAGGACTCCTTTGGACTTGATACGTT
TCAAATTCCCAATAGTCGCTCATACCAAGGCTTTGAAGATTGACTCGGAG
AGTAAATTTGGTCTGCTTCTTGTTGCCCTGGAGACTGGGTTTGTTAAGGA
NATATTCTTAATTTTTTGGCCATTTTCATCATGGACATTCTTATAAAGTG
TATTCTTATAAAAAAAAAAGCGTGTATATTTTATAATCATTTTACAACGC
TGAAGTGCAGAATTTCAACTGCGTGTATACTTTTGAATCACTTAATAATT
GTTATAATTTTTTATTTATGACTTGAAATGGCACAATAGGTATATCAAAG
TTTGAATTGACTCTCTCGAAAATAATTCGAAATTTCTAAGTCAAAATTTA
GAAATATTAGTCGGAGTTTTGACAAGCTGACGATGATTTTGCCTCTGCAA
TCTTTGTTGTGATATTGATGATTAACTTGAGAAGAGTAGAAGGGGGGGGT
TTCAGGGAGTACTCGATTCCGCAATTCCGCCAATTTTTTCTTCCAATTTC
CGTCAAACCGTCTAAAGATGAACCGATTTTTGTCAAAAATTCCACGAATT
TTGAATATTTTTTGCCAATTCCGAAATTCTGCAACACTTTTTGCTAAATT
CCTTTTTTTCCGCACTAAAATTGTCAAAATTTCCGTCTCCATCGGAGAAC
CCAATTTCCGTAATTTAGTCTAATTTTTCGTCAACTTCCGCCACTTCGTC
CGTCTGACGCTCTTAAAGTCTATTTCAAATTAGCTGGCAGTGTTTTTTCA
AACCTCAATAACTTTTGATAGAATTTGAATTAAATAGCAATTTTGTGCTC
GTTAAAGAGACAAACAGGAGTGGAATAAGTCAACCAGGGCAAAGTTTTAA
GCTGTATTTTGTGATAAAATGAATATTCTTTTAATTTTTTTGCGCATTTA
TGACGTTCTAAGATTGAAGAGTTTCTGATACAAAAATGAAGATCATAGCA
TTATTCTACAAGAATTTGATTTTCTTCTTCTTCATTTTTCATCTTCGTTT
TTCCATTTTTTGAACTTTTTCTTTTTTAATAATATTCCACTCCGGATTAT
CTTTTTAACGAGCACAAAACCGATAACTAATTCAAATTCTATCAAAAGTA
ATTGAGGTTTGAAAAAACAATGCCAGCTAATTTGAAATAGACTTTAGAAA
GGTGTTCCCAAGAGGTATAACATCAAAGTTTATTTCTTTCTTTTTATGTT
TTTAACGAGGCAGCAACGAAGCTAGCAGAGCTTTTTCTACAATGGTTCAT
GGTTTATGTCATTTCAAATCATTTTTGTTCAGATTGGAATGAATATATGA
TATACGGTATGTTAACACAGAGTGTCTTGAAATTTGTTCTTCATTTGGTA
ATTTTTTTCGTTTCAGATTTTAAAAAGATTTTAATGATGAGTTTGAATGT
TTTACCGACCGAACTTTTGAAAATGGTGATATCGTATCTCGGTAAAAGAG
ACGCCAAAAGTTTAGCTGTTACTTCAAAAAGAATGTATATTTTTCATAAA
ATTAAAGTGCTCTAAATATCTTTTCAACGGTACGTAAAATGTTCCAATTG
AAGCATTTGTTGGAAAACGGCAAGCAAAACAAAGTGTATGGACTTAACTA
TATAAAAATTAATTTTTAAATATTGCAAGATTTTTAAATATTGCATGATC
TTGTATCAAAACTTCTGTCAGTCTTGGACTTAGCGTCATTTTGACGGTTG
TCGTGGGAAAAATCTATTATGCGAGGGGCCCCTAGTTCTCCCAGCTGTCC
AAACACGTATGTAAATTTGAGTCTTCTGTCGACAAGTAGAAATGCCCTGT
TTTCTTAGAAAGCTGATGAAATCAAAAGTTTTCAAATTGTGCCAAATTAT
TGTTTGGCCCCTTTTGTATCTTGAAATTAAGTTTTCATAGAATATTATTA
TAAAGCTCTCATATATGGGTTATCTATTTTGATCTTGGAATTTCTTCTTC
ATTTTTTTTTTTTTTTTTCGTTTCAGATTTTAAAAACAGTTTAATGATGA
GTTTGAATGTTTTACCAACCGAAATTTTGAAAATGGTGATATCGTATCTT
GGTAAAAGAGACGCCAAAAGCTTGGCTGTTGCTTCAAGAAAATTGCGTGA
AATAGCGTTGGAAAAGATATGGTCAAAACCGATCTACCAGAAATCGAAAG
GATTGAGGTTTTTGAAGATGATTTCGCGTTTCCCGATTGATCAAATTCGT
GTCAAAGATTTTCGATGCAAGATGGAGGAAGTCATTGAAACCGTATCATC
TTTAAAACGTTTGAACTTAGATTTGAGTTCTAAGTGTGTCTTTAGGACTC
CTTTGGACTTGATACGTTTCAAATTCCCAATAGTCGCTCATACCAAGGCT
TTGAAGATTGACTCGGAGAGTAAATTTGGTCTGCTTCTTGTTGCCCTGGA
GACTGGGTTTGTTAAGGAATTAATTGTCGATCATCACAGTAAAAATCTTC
GTTGGTCACCTGAGCTCCTTAAAATGCTGGTCAGTAAAGTATACATTTCA
GAAATCTCAGTCAATGCTCTCCGATTCACGGATGAGAATGTTGAGGAATT
TTGTCAGATTTTCTTATCTCTCAGAAACTGTCAGGTATTTTTTCCTGAAG
AAAAAGCATGGGAACAAGACCGAATAGATGAGGAAGATTTGACACCGTCA
AGGTTAGTAAAATCGAAAAAAGATCGCACTAAAAACAAATTTACTATCAA
TGATATCGAAACATTTGCAAGATATGATGTTAAGATTTCTTCCATGGCAG
GTAGCAATAACATGTTAAACTTGGATTTGAAGTACAATAAAGACATTTCA
AAGCTATTGAAATTTGTACCAGTTCTGAAACGGTTGCAATATTTACAATC
TTTTAAACTGCGAGAAGATGGAGAACCATTTAAATGGGATCTCTCAAAAT
TTGACCAATTGTCTGACTTGCCCATCCGTAGAATCAGAACAAATATGTTA
ATCATCAGTAAAGAGAATGTTGGCAACATCGTGGACACACTCTCCAAGAT
GAAATCATTGCAGCATCTACATATTCTATGGAATCGCTTTAAATTGACAC
CGGAAGAATTTGCACTTTTTCAAACCCTACCTGTAAAGATTGTTAATTTG
ACAGCTTTGGATTTGATGAAAGAAAATGTCCCGAAATTTCGACAAATAAT
GAATGAGATGAAAATTGAAAAAATCAACTCCTCATTGCCAGTGAAAAAGA
GGAATAAATTAGGAATTCGGTTCCGTCAATTTGGACCTGGTGCGATGTTT
TGGTCCATTTAAGCGAGGGATCAATAAAGTTTTGTTATTTTGAGAGTCGG
TCTCTTGTTGTCTGGGTAGTCTATACTCCATTGAGTTTCAAGCCCGAAGG
GCTAGAGGCAAAACTTTAACCCTTCTCAGGCAAGAGAAATTGAAGTCACT
TATTTCCCATCCAAAACACGCATAGAACGCGCCGTAATCACGACGACGGA
TTGTATCTAGCGGTTCCTTTGTTTTGGAGGACTACATATTTAAAATCTAG
CGATAGATTTTAGTTTCAGCCCGGTGTTTGTGTAAAAACTTCGCGTGGGC
GTTCTGGATGGGAAATAGGTGGTTTTATTTCCCATCCAGGAGTTTCGCCT
CTAGCCCTTCGGGCTTGAAACTCAATGGTATACCCCATCCACTTAATAAG
TAAAATCTTTTTTCAACTATCAAAAACTACAGTATAAAAGCACCGTTATC
CGGATGATACTGTGCGTGGGCTAAAATTCTTGAAATCAATGAAACAAAAG
GAAAAAAGACTTTTTGTTGTTCTGAGTCAGCGCTTTGGGAATCTGCGATA
GCAGATTTATAAACTAGATGTGTGAAAAATCATTACCCAGATGATGTCTT
TGGATTTGGTCGTGTTTGTCATCTTTGTAAATACATTCGTGTTTTTGTAC
TTATTTATTAAAATGAAGAAATGCTTATGAAGCGTAATGTTTTCTCAAGG
ACACTTGTACAGGGTGTCCCTAATTAAAGTATCGAGTTTGAACATGCGAT
TGAGTAGAAAAGTTTGTGTGTGTGTTATCGCTAAAATATAAGAACGTTCT
CCATCACACAGGTTTATTACAAAAGGTAGTTACAATGTATAAATTAATCG
TAATGACAAAGAAAAAAGAGGGAGAGCTTAAAATACAATTT

Coding sequence (CDS) from alignment at sc0000636:183882..190522-

>TCONS_00027619 ID=TCONS_00027619|Name=TCONS_00027619|organism=Clytia hemisphaerica|type=CDS|length=2580bp|location=Sequence derived from alignment at sc0000636:183882..190522- (Clytia hemisphaerica)
ATTTTAAAAACAGTTTAATGATGAGTTTGAATGTTTTACCAACCGAAATT
TTGAAAATGGTGATATCGTATCTTGGTAAAAGAGACGCCAAAAGCTTGGC
TGTTGCTTCAAGAAAATTGCGTGAAATAGCGTTGGAAAAGATATGGTCAA
AACCGATCTACCAGAAATCGAAAGGATTGAGGTTTTTGAAGATGATTTCG
CGTTTCCCGATTGATCAAATTCGTGTCAAAGATTTTCGATGCAAGATGGA
GGAAGTCATTGAAACCGTATCATCTTTAAAACGTTTGAACTTAGATTTGA
GTTCTAAGTGTGTCTTTAGGACTCCTTTGGACTTGATACGTTTCAAATTC
CCAATAGTCGCTCATACCAAGGCTTTGAAGATTGACTCGGAGAGTAAATT
TGGTCTGCTTCTTGTTGCCCTGGAGACTGGGTTTGTTAAGGAATTAATTG
TCGATCATCACAGTAAAAATCTTCGTTGGTCACCTGAGCTCCTTAAAATG
CTGGTCAGTAAAGTATACATTTCAGAAATCTCAGTCAATGCTCTCCGATT
CACGGATGAGAATGTTGAGGAATTTTGTCAGATTTTCTTATCTCTCAGAA
ACTGTCAGGTATTTTTTCCTGAAGAAAAAGCATGGGAACAAGACCGAATA
GATGAGGAAGATTTGACACCGTCAAGGTTAGTAAAATCGAAAAAAGATCG
CACTAAAAACAAATTTACTATCAATGATATCGAAACATTTGCAAGATATG
ATGTTAAGATTTCTTCCATGGCAGGTAGCAATAACATGTTAAACTTGGAT
TTGAAGTACAATAAAGACATTTCAAAGCTATTGAAATTTGTACCAGTTCT
GAAACGGTTGCAATATTTACAATCTTTTAAACTGCGAGAAGATGGAGAAC
CATTTAAATGGGATCTCTCAAAATTTGACCAATTGTCTGACTTGCCCATC
CGTAGAATCAGAACAAATATGTTAATCATCAGTAAAGAGAATGTTGGCAA
CATCGTGGACACACTCTCCAAGATGAAATCATTGCAGCATCTACATATTC
TATGGAATCGCTTTAAATTGACACCGGAAGAATTTGCACTTTTTCAAACC
CTACCTGTAAAGATTGTTAATTTGACAGCTTTGGATTTGATGAAAGAAAA
TGTCCCGAAATTTCGACAAATAATGAATGAGATGAAAATTGAAAAAATCA
ACTCCTCATTGCCAGTGAAAAAGAGGAATAAATTAGGAATTCGGTTCCGT
CAATTTGGACCTGGTGCGATGTTTTGGTCCATTTAAAACGATTTTAAAAA
CAGTTTAATGATGAGTTTGAATGTTTTACCAACCGAAATTTTGAAAATGG
TGATATCGTATCTTGGTAAAAGAGACGCCAAAAGCTTGGCTGTTGCTTCA
AGAAAATTGCGTGAAATAGCGTTGGAAAAGATATGGTCAAAACCGATCTA
CCAGAAATCGAAAGGATTGAGGTTTTTGAAGATGATTTCGCGTTTCCCGA
TTGATCAAATTCGTGTCAAAGATTTTCGATGCAAGATGGAGGAAGTCATT
GAAACCGTATCATCTTTAAAACGTTTGAACTTAGATTTGAGTTCTAAGTG
TGTCTTTAGGACTCCTTTGGACTTGATACGTTTCAAATTCCCAATAGTCG
CTCATACCAAGGCTTTGAAGATTGACTCGGAGAGTAAATTTGGTCTGCTT
CTTGTTGCCCTGGAGACTGGGTTTGTTAAGGAATTAATTGTCGATCATCA
CAGTAAAAATCTTCGTTGGTCACCTGAGCTCCTTAAAATGCTGGTCAGTA
AAGTATACATTTCAGAAATCTCAGTCAATGCTCTCCGATTCACGGATGAG
AATGTTGAGGAATTTTGTCAGATTTTCTTATCTCTCAGAAACTGTCAGGT
ATTTTTTCCTGAAGAAAAAGCATGGGAACAAGACCGAATAGATGAGGAAG
ATTTGACACCGTCAAGGTTAGTAAAATCGAAAAAAGATCGCACTAAAAAC
AAATTTACTATCAATGATATCGAAACATTTGCAAGATATGATGTTAAGAT
TTCTTCCATGGCAGGTAGCAATAACATGTTAAACTTGGATTTGAAGTACA
ATAAAGACATTTCAAAGCTATTGAAATTTGTACCAGTTCTGAAACGGTTG
CAATATTTACAATCTTTTAAACTGCGAGAAGATGGAGAACCATTTAAATG
GGATCTCTCAAAATTTGACCAATTGTCTGACTTGCCCATCCGTAGAATCA
GAACAAATATGTTAATCATCAGTAAAGAGAATGTTGGCAACATCGTGGAC
ACACTCTCCAAGATGAAATCATTGCAGCATCTACATATTCTATGGAATCG
CTTTAAATTGACACCGGAAGAATTTGCACTTTTTCAAACCCTACCTGTAA
AGATTGTTAATTTGACAGCTTTGGATTTGATGAAAGAAAATGTCCCGAAA
TTTCGACAAATAATGAATGAGATGAAAATTGAAAAAATCAACTCCTCATT
GCCAGTGAAAAAGAGGAATAAATTAGGAATTCGGTTCCGTCAATTTGGAC
CTGGTGCGATGTTTTGGTCCATTTAAAACG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_015577XLOC_015577Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00027619-proteinTCONS_00027619-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00027619-exon-sc0000636-1575043694:190519..190522TCONS_00027619-exon-sc0000636-1575043694:190519..190522Clytia hemisphaericaexon
TCONS_00027619-exon-sc0000636-1575043694:183882..186046TCONS_00027619-exon-sc0000636-1575043694:183882..186046Clytia hemisphaericaexon
TCONS_00027619-exon-sc0000636-1510915933:190519..190522TCONS_00027619-exon-sc0000636-1510915933:190519..190522Clytia hemisphaericaexon
TCONS_00027619-exon-sc0000636-1510915933:183882..186046TCONS_00027619-exon-sc0000636-1510915933:183882..186046Clytia hemisphaericaexon
TCONS_00027619-exon-sc0000636-1491911889:190519..190522TCONS_00027619-exon-sc0000636-1491911889:190519..190522Clytia hemisphaericaexon
TCONS_00027619-exon-sc0000636-1491911889:183882..186046TCONS_00027619-exon-sc0000636-1491911889:183882..186046Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000636supercontigsc0000636:183882..190522 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
3.08834	1.73829	0.14768	0	0.800458	0.330951	0.682675	0.536726	0.58873	0.73737	0.628339	0.378357	0.109583	0.471268	0.321906	0.478051	0.469315	0.427574	0.256083	0.25273	0.389604	0.502493	3.70925	2.45013	0.550476	0.474429	0.365598	0.366571	2.58016	2.18763
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR032675L_dom-like
IPR001810F-box_dom
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00027619 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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