TCONS_00027617 (transcript) - C. hemisphaerica

Overview
NameTCONS_00027617
Unique NameTCONS_00027617
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length208

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00027617 ID=TCONS_00027617|Name=TCONS_00027617|organism=Clytia hemisphaerica|type=transcript|length=208bp
AACAATCAAGTAATATCTGTTCATCTTTGAGGTTGAAATTTGTGCTTGGT
CAGCATTTTCCAAAGTGTCATTTTTCGAACACACTTTCCTTCGATTGTTG
TTTTGATCCAACTGTACTGTTCGACCCATTTTATGAGCGGTAGTATCGAG
CTTCAATTAGTTTAACCACTGATGAAATGAAATCATGAGAACTTCCAGCG
CAAAAATG
Run BLAST on NCBI

transcript from alignment at sc0000636:166492..166769-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00027617 ID=TCONS_00027617|Name=TCONS_00027617|organism=Clytia hemisphaerica|type=transcript|length=278bp|location=Sequence derived from alignment at sc0000636:166492..166769- (Clytia hemisphaerica)
AACAATCAAGTAATATCTGTTCATCTTTGAGGTAGATGTTTGTGCTTGGT
CAACATTTTCCAAAGTGTCATTTTTNCATGTAATATCTGTTCATCTTTGA
GGTTGAAATTTGTGCTTGGTCAGCATTTTCCAAAGTGTCATTTTTCGAAC
ACACTTTCCTTCGATTGTTGTTTTGATCCAACTGTACTGTTCGACCCATT
TTATGAGCGGTAGTATCGAGCTTCAATTAGTTTAACCACTGATGAAATGA
AATCATGAGAACTTCCAGCGCAAAAATG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_015576XLOC_015576Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00027617-exon-sc0000636-1575043694:166739..166769TCONS_00027617-exon-sc0000636-1575043694:166739..166769Clytia hemisphaericaexon
TCONS_00027617-exon-sc0000636-1575043694:166492..166668TCONS_00027617-exon-sc0000636-1575043694:166492..166668Clytia hemisphaericaexon
TCONS_00027617-exon-sc0000636-1510915933:166739..166769TCONS_00027617-exon-sc0000636-1510915933:166739..166769Clytia hemisphaericaexon
TCONS_00027617-exon-sc0000636-1510915933:166492..166668TCONS_00027617-exon-sc0000636-1510915933:166492..166668Clytia hemisphaericaexon
TCONS_00027617-exon-sc0000636-1491911889:166739..166769TCONS_00027617-exon-sc0000636-1491911889:166739..166769Clytia hemisphaericaexon
TCONS_00027617-exon-sc0000636-1491911889:166492..166668TCONS_00027617-exon-sc0000636-1491911889:166492..166668Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000636supercontigsc0000636:166492..166769 -
Expression
No biomaterial libraries express this feature.
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00027617 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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