TCONS_00027611 (transcript) - C. hemisphaerica

Overview
NameTCONS_00027611
Unique NameTCONS_00027611
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length3907

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00027611 ID=TCONS_00027611|Name=TCONS_00027611|organism=Clytia hemisphaerica|type=transcript|length=3907bp
cgagagtcgtcgtcggtccgccgtccctcgagagtcgtcgtcggtctgcc
gtccttcgagagtcgtcgttggtccgccgtccCTCGAGAGTCTTCGTTGG
TCCGCCGTCCCTCGAGAGTCGTCCGGTGAAGTTTTATGGTTTTTTCAGAG
GCTAAATGAGTCTTACAAGCTAGTTTATCACACTTTTTTCTTTCGAATCT
GAGCAACCACGAGGAGACAAAAATGGACAGACAGAAACTGCTAGAAAATT
TGCTCACTATTGAGGAAAAGATTTTGTTGGTGAAGCAGCAACTAGGAGCA
TCTACTGGAGCATCAACACTAACATCATTAAACACAACCAGTACCCTCTC
ATCTCTGCCACTATCATCAGGAGCAACAACTTCTTCACCATTCAACGCAG
TCAATAATGCATCTGCCCTTACACAAGCATCAGCTGGAGCATCAACACTT
GGACTTTTTAACACGGCCAATAGCAATACTGGTTATGTGCATCAACTAGA
ATCATCTGGATCATCAACACTTGGATCATACAATACTATCAGTACTCTAT
CTCCTATCCCACTGTATGACCATAGCATTGCGAAAGAACAAGTAGACAAT
CAAATGGGtattttgttTCCCCAAACAAacggaagaaaaagaaaagcaag
TAGTCTCAAGAATCCTTTTATGAAGGACACCTTTACAAGAGACTTCTGTT
GTCTCCCTTTCGTGAACTCAGCAACAACACCATCCAGTCAAATGGTATTA
ACCCTGGAATATGCCGGTTTGGGTAGGAAAAAGATCACATTTTCAAATGG
AAGCACACACACTGAGGTAGTTTCACAAATATATTCTACTTACCCTCGGC
TGAAAAATGTTGGAATGTTCACACTACATAAAGCAAAACATGGAGGGAAT
GGTCAACCCATAGAGGACATCACTTTAGGATCTTACGATGTTGACTCACT
TCGGAAGCGATTTAAAACAAAGTCGTTAATTTACCTGAGGCCTCTACAAA
AGAATTTGGACTTGACAATGATGGATGGAAGTGAGgcaaacaaagaaaat
caaaacattaaaggGGCGGCAACAACAACATGCTTCCGATGCAAAAAAAT
GATTCCTTTGAGAAGATTTTTAGAACATCAAAGTTCTTGCAAAAAGACTA
CTGCTACAATGGTGAATTATACAGCTGCTACAGCTACATCCCCTGCTGTA
ACACCAATCGCTATGAACAATGCCAGCATTAAGGACACTCTGGATGGTGA
TATCATCTGCTCGATATGCAAAAAAGGCATTTACATTCCAATAACAAAAG
TCACCACATGTGATTGCAATTACCACTACAGTTGCGTAGAAGGAGAATTG
ATGGACACAGACTCGTTCGAATGCCCAGGGTGTGGTTTAATGGTGTCAAG
GGTTCCTGAAGAAACCCTTCCGGTATTTCCTTTAAGAATTAACAAGGACG
ATACATTCACTCAAACCAAGGACACATTCATTGAAACTCTTATGAATGAA
TTGTGTGACCTGAACAGCGTCGATCCGATAgaaattttaaagtttcttcA
GCTGAAGCTTGTGAAAGGAAGAGAATTACATATTCCAGATATGACAGTCT
ATGTACCAAAAGAGGATGAATCAGTTAACACAATTGCTGTTGACAGGGGT
GCTATCATTGAATCTACATTCCTTGAGTTTGAAAGTATTGAGGACTTCGC
TGTCACCTTTGAAATTGACTTTATAGGAGAGTCAGCGAAGGATAATGGGG
GTGTCAGAATGGAATGGATTGGCATTATTAACCGTGCAATCTATGAAAAG
TATTTTGAAAAGGGACTAAGAACTACTTTAACCAAGGATTACTATTTTGT
TGGTGCTATGGCTGGTATAAGCATTATACAAGGTGGAATTGTACCAAAGT
TTTTTAGTGAAGAACAACTAAGCTTCCTTTTCGATGAAACAAATGAAGAT
ATTGTTGGACCTATGAAGGAGGTTATCAAAGGGTTACAAAATTTCCATTT
ACAAACAGTTTTTCAGCGCTTTCCAATAATCAAGCACCTTTTTCGGAAAA
GCCAATCCAAACTGAGCCCGAAATTCTTGTTGAACAAAATCACTGTCAAT
TTCAAACCTGAAGGATCTTCGTGGCTCCCGCGTGAAAAGAAAATGTACTC
ATATTTTGTGAGATATCTCAGAGAGGTTGCTTCTGGCAGGCGTGGAAATC
ATCTTTCCCTGCAAAATATATTGCGATTTATCACGGGCTGCCCTGAGGTA
CCTGAATTGGGGTTTAGTGTCCCGCTGGCTATGAAGTTTGTCAAGTCAAC
AGTAACCTATGTTATCAAACCTGCAATTTCAAACAAGGATGAGGTTGAAC
CAAAAGAAGTAGCTAAGGAAGGCGAAGAGGAAAAAACGAGTGACAATgca
aaaaaagaagatgaagaagttAAGGTGAAGGTAGTTGACTATCTCCCGAA
AGCACACATTTGTTCGAATGAAATAGAATTACCGATTGGTACTTTAGTAG
ACGAACTTCCTACAATGGAAAGATTAATTAAATTTTACGATTATGCTTTT
TCAAATACATACTTGGGTAATATTTAGACCTCATTAAGTATAGGaccatt
tttatcattttcttttataGCTGTAGGTTATTTTTGTCGGGGACcaattt
ttgcacgaaagttTTTTAAACTTACCCCTGTTAGTTTTTATTAATACATA
TCTTGGTAGATTTATTAAAAATGCAAGAATATCTTTTATTTTAATTCTCC
GTTTTTAATGGTTTTACTATGTAcaaaatattttagttttttgtcaTCTT
AATCAAGATGTTTTACCCTAGTTATacatgttttagttttttttttatta
ttagttttggacctaccgggaggtcctatTTAACCTTTGCTCGTTCGCCT
GtgaccaacttttctcgagttATTTCTGTTTTTTGacacaaaggtgcaaa
atgtcatgtccaaaatgtgacagaaccagttttttctgaaattttactCA
GATGTGTATTAGCAATGCTTGCAAAATCTGATTTTTGggggaaaaaattt
aaaaaaagattttaaatagAGCATACAATACAGGGTTTGGATTTCTGAAA
AACATGTTTTACCGGTCCAAgatgccggaaaaccgtttttcttctgtcat
tttgttgaaatttcatcagtttctgattttctttaaaatgtgacggagtt
gGAATTTTTGTCCGATCGATGTTATTTTTACGGTTTTAAATTGGACTTAT
TTGTTAGGTTTATTTGTTATATTTATTAAATTGACCGATGTTAAGCACTT
TTAATTTCCACTTTTTCTAATTCATGAATCCGGATATCCTCTGAAATAGC
CAAAGTTTTCCTTCTCCTTTTGTTCATTAGCTCGTTCGTTCTTTCTTTAG
GATCTTTTCCACTATCTCTAAACTGTTTTCACATCTCCTTTTGTCTAACT
CGAATCATCAGATAGTTCCAATCGGCATCCcagcttttgattttttcccc
gcgtagtattttttatttctacttTTTCGTCTCGTTAACCAAGTCTTTTT
ACTCGCAGTttgtatttcttattttttttgctgtacTTTTTTACGACGTA
GTATTTTCAACACgtttattttatctattttaagCCAAGTCCTTAATATT
TGTGGGGTCTCCTATCCAGGAAGTAtttgaatagacgatatcggctttcc
gaattctccccgaatgattacccatgatgcattgcgcaaaaagattcacg
gacaatattgacttactgaatttttttgcgcaatgcatcatgggtaatca
ttcggggagaatttcgttaagccgatatcgtctattagaaACTGGGCTAT
AacatttttaacattagtttcCTTGTACATATTTGATACATTTTTGATAA
AAGAGAA
Run BLAST on NCBI

transcript from alignment at sc0000636:114698..131315-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00027611 ID=TCONS_00027611|Name=TCONS_00027611|organism=Clytia hemisphaerica|type=transcript|length=16618bp|location=Sequence derived from alignment at sc0000636:114698..131315- (Clytia hemisphaerica)
CGAGAGTCGTCGTCGGTCCGCCGTCCCTCGAGAGTCGTCGTCGGTCTGCC
GTCCTTCGAGAGTCGTCGTTGGTCCGCCGTCCCTCGAGAGTCTTCGTTGG
TCCGCCGTCCCTCGAGAGTCGTCCGGTGAAGTTTTATGGTTTTTTCAGAG
GCTAAATGAGTCTTACAAGCTAGTTTATCACACTTTTTTCTTTCGAATCT
GAGCAACCACGAGGAGACAAAAATGGACAGACAGAAACTGCTAGAAAATT
TGCTCACTATTGAGGAAAAGATTTTGTTGGTGAAGCAGCAACTAGGGTAA
ATAATAGAAAATCATTATGGTTTGATTGAGTTCTGGCCCAAAATTTGAAA
TTTTTTCCAATCTTCCATGTAGTAGATAGTAGTATGATGGGATGGGGGGT
ACCATTTTTACTTTCATTTTCCACCCAGGACGTTTTTATTCCAAACCCCT
GAATTTGTCTGTAACAGGGGGCGGACGACACAAGATTTCTGAGGGCAAAA
GTTTTCACCAATTCAAAATTTCCAAGGCGAGAGAAGTAAATGTATGAATT
TCCAAGGCAATTGAATCAAAAAAGGTAAAAAAGAGTAGAATTTCAAAAGT
ACATGGATTTTCACCAGAATTTCCGACCACCCACTGGTAAAGAAAAATTA
CTTCAGAGGCTAGAAAATTAAAAAATGCACACGTCGTCCAACAGAGGAGA
GGGGTAACAAAGATTTTCTGGAATAGCCCATTTACAGGTACCAAGGGTAT
AGAGGGGGTTACTGTAATTCAGTCCCTTCATTGCCTTCATTTCAACAGCA
CATCTGATCTCTTTGACAACAAATTTGTTTTCGTGTATTTTTTAATACGC
CGTTCATTAAGTCAAATCAAATGACTTTAGAGGTTCGGTGAAATGGTGAA
ACATTCTCACATGTTTTGTCAGATAGTTCCAAGTTAGAGCAGTTGACGGT
ATCTTGTATGTATTTCTATATTTCTAAGGTACAAAATCTTTTTATTATCT
ATTAATTATACTTATACAATCCAGACCACAAATCTGAAGCACCTGAATTA
CAAGAACTCCTTTCTGCAATGATAGCAAAAATTGATAGTATTAATGATTG
TACACCTGACACATACATCCTTNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNCCAGCCACTGCTCCCTGCCTATCTCCCTTACAGGATGGCTG
ACTCGAATTCAATTGTTGAAATGGTCAAACACCGGACCCCACGGGTTGAG
TGAGCAGAGACTTTGCTGAAACACATCAAAGGTAATCAAAGGTAGGTACT
TTTTCAGGGTAAAGTTTGATCAAAGGAATAAGCATATAAAAAATGAAACT
TGGCAAAAAGATTCCTTTTGTGGCCCTTAGTTAGATTATTCTTANTAAAA
AATGAAACTTGGCAAAAAGATTCCTTCTGTGGCCCTTAGTTAGATTATTC
TTACTTGTCAATTGCTTATTTTGAAACTTTTTACTTATTAATTTTGTATG
TCCAAAATCAAGAAACGGGTCTTTACCCTGAGTATAATATGGATAGTAAA
AGGATTCTGTCTGTCTGTACCTTGGAAATATGGAAATAATTGATCAATTA
ATCTGTCTTGTATTTAGAGCATCTACTGGAGCATCAACACTAACATCATT
AAACACAACCAGTACCCTCTCATCTCTGCCACTGTGAGTCACTACATGGT
CTCTTTTTTCAATTTCAGAGAGGTCACACTCAGCTGGTAACAAAACACCC
TGATTGATTTCATACCTTGGGAGTGGTAGAAAGTATCTACTAGGGGAGGG
GGCTGGATGATTCTAGGGGGTTTCCAAACCTCTTCCCTTCCTAGGGGAGG
GGGTCTCAAAAAATCTTCAGGGGGTCCAATGTTTCTTTCAACTATATAGA
TTTTAAATGTACCAGCAACTGCTACCGTAACTTGCCTTTTTATTATTTGA
GTACGAATATGTCAATATACCGTAAGTTGGTCTAACATCCCTCGTCTAAT
TCTGACACCTTTCTTTAGAGACTGGAATAATATGAACGTTTGAATCACTG
ATTGAAAAAGGATTATTCCTCTCTGACCACTAAGCAAAGAAAAATAGTTT
TGATCTTTTTATCAATTTCAGCTGATAAAAGGGTGTCGAAATTAGACAAG
GGATGTCGAAATTAGACCAAGTTACGGTAGGGCTGTAGAAATGGGTCGTT
ATCATTGAATAACTAAGTTTTCCTTCATATCATACTTCCTTACTGATATA
GCTCAAATAAACACCCCTCCTAGATGGGAGGCGTTTTTTCGAAGGGCAAC
AACAGGAGACCCGGAATCTTCGAGTTAGAAAACTCTTAAGTTAGCAATTT
TTGAGCTAGCTAAATTATTTATGACGTCATAAAAGTGCAATTTATGACGT
CACTCGACTCTAACTTGATTTTCAAGGATTTTTGCGTTAGAATTAACTGG
AATCTTATTTTGCGCAAAACCTTTTTCCAGTTAAAGCTAACTCACAATTT
ATTTTTTGTTCACTAGTTTTCGAGTTAGCTATCTTGGATTTTTTTAGAAA
AAGTTAACTTTTTTTATGTGTAAAAAAATCTAAGTTTCGAATGTGAATTC
AATTCATTTGTAAATATACAAAATTCAAAAGTTTTTATTTCTATTCGAAT
TTGAATGTTTTTTTGAAAATCCAATATCAAATATCCTCCCTCTACAGTAT
GTAGATACTTTTTGACCACTCCCTTGTATAACTTCTGACTTTTTTGTATT
TAAATTGCCTGAAATACTACTTATTTTTGTATTATAGTTTTTAAATTTGG
AAGTGTGTACATGAGCTAAACCCCCTTTTTGACTTCCCTAGGACTTGCTG
ACCTATATTAAAAAAGGGCTATATAGCATCGATATTGTGTAGCCTATTAT
GGACACTCTGAATCTAGAAAAATTTAATCTTATCTCTTCAGATCATCAGG
AGCAACAACTTCTTCACCATTCAACGCAGTCAATAATGCATCTGCCCTTA
CACAGTGAGTTGACAACTTAAATCTTATGATTTACACAACTGTTAATCAG
ACGAAAACATCTTGGCATGTGTCTATGCCTTGATTATTATGGTTCTACTG
AGATGAATTTTGCTACGATTAAAACTGTATATGATTAGTAATCATAAACC
TTAGACCTCAACCATTGCTTCTCTAATCTCAGAATTATCCTGATGATTAT
TTCTTTCAGAGCATCAGCTGGAGCATCAACACTTGGACTTTTTAACACGG
CCAATAGCAATACTGGTTATGTGCATCAACTGTGAGTTATACTTTATGGA
ATAAGATTAGATAACTTTTAAAAAACTCTTCTGATTTCTTCAGATTGGAG
AAGATATATGTAAATAATTTAACAATTACCAAAATTATTCCAAAACAAAA
ATGGCTACAGTCTCCGAAGTTTGGGGTAACTACCAAAGCAAATGTAGAGG
CTATCTATAGGATTTCAGGGGGACCTATTATTTCAGGGAGAACCTAGATT
TTTAGGTAGTACTTAAGCCTTGATAGGTAATAAGTCTGATCTGGCAACCA
ATGACTTATTTTTTTAAAGCAAATTGGGGCTGTCTCAGCCCCAAAAGCAG
CCCAAAAAATGGGCAGGTATAAAACGCCTACTACCTACTACTTATTAATT
ACTACCTATTACTTACTACCTACTAGAATATATTTTGAGGACCAGAGCAC
TCCTCNTATTACTTACTACCTATTACTTACTACCTACTAGAATATATTTT
GAGGACCAGAGCACTCCTCCTTTGTTTCTAAAAATGAAAATTAGCTTTCC
CGCTTTCTTTTGTTTATTTATTTTTCTCTTTGGCTCTATGTTAAAAAAGA
AAGAACCTTTTAATTGATAGAGGAACACTCATAGTATTATCATAATATAT
TGTTTATGACATAAAAGAGATGAGAAGTAAATAGAACGTCCATTCAAAAT
AGTCTTGTTGGGGGTGAGAGACAAAGTTTTTTTGAAAAAAAAGTATTCTC
GGCCATGTGATTTTTTTGTTTGATATTTGCCTCGATTATTCAATAATATG
GATAGCACCCCCAATCAAAATAAATCACTACGGAGAAGTTCGATAAAATG
GTCTGCAAAATTATCTGAAAAACAATCATAGTAACAAGAGAGAAAGTGAA
AGTAAGCATGAGAAAAGAAAAAAAAGGAAGAAAGCATTTTGGACTTGAAA
ACATGATGATATATCTCTAATAATGGTTATTTTACCAAGTTAAGTCCTGA
TTTCGAACCCTGTGAGTTATATATCCTTCTAAAAATGAAATTTTCTTTAT
TTTAAGACATATTGTAGTAGGTAGTAAGTAATAGGTAGTAGGTAATAAGT
AGTAGGTAGTAGGCGTTTTGTACCTGCCCCCCAAAAAATACCAACCCTGA
AGCCTGGAGCAACATTTTTCCTACTAGAATGATTTTGATACTAGCTAAAT
AAGCCTTTCAAATCCTTGAGAAAACATTTAATGAAAAGATAAGTAAATCG
ACTATGAACACATGTACCTTTTTCTATCATCTTTTTAAGGACAATCATAT
GGCAATAACATAAAAGGCGCAAAGCATGTCTGAGACGAGTAAATGTAGCT
TGAAATTGACTAAGGTCTATGAAAGCACTTTAATTACAACCTTTTAACAA
TTATTGTTATGATTTTATATTCTTTCAGAGAATCATCTGGATCATCAACA
CTTGGATCATACAATACTATCAGTACTCTATCTCCTATCCCACTGTAAGC
AATTTTTCATAGCAGCAAATTTTGACAAAAATTTACCCTTGACCTGCCTT
AAACAAGAAAAGTTCTCCTAAAAATTTACTATTTTTTACAGTTAACTCTT
GGGATACAAGACAGCCAAATGTGGGTGCAAAATTGGGTGATCAATGTTTT
TAGCCAACCTATTAAAGGATCCTCATGCAGGAATTTAGTTCTTCCAGGCT
TGTAATTTATCAGTGATTGATTATTGTTTGTAAATATTTCAGGTATGACC
ATAGCATTGCGAAAGAACAAGTAGACAATCAAATGGGGTATTCTTTTAAA
TGATTTACGTTTCAGACTTATATTGTTTTGTTTTGTTAATGTACTGTATT
GGTCTAAAATACCTCAATGTCAGAAATTTCTTCGTCCAGAAAATTTTGTG
ACTCACTTCAAATTTCATTTATTTAAATTGCAATTACAATTGAATTTCCG
AATTTAGGCAAGATTTATTTATTTCACGAGAATCAATTTGCATGCAAGAT
TTTAATTAATAAAACACTAGTAAAAAAAGCTTAAAGCCTACTTTTGTGTC
TTTACTGTATAGGCAAAAGTTTACCTAAGACTGATCTCTGAAAACTGTGT
CTTTATAAATTAATACATTTTCAGGAATCAACCTAAACAACTTTTTTAGG
AATGTAAATTTCCCAAAGTTGAGGGTCATTAGCAAAAATTAGGAGTTTTC
TGGGCGCAGAAATTTCTGACACTAAAGTAGACTAAAAATATTTTCAGACA
TCCCCAACCTTAATTCAGATATTTTTATGCAAACACATTATAATTTTTTC
TATTGAATTGCTCTATTCTGTAGGATGCATGATAATGTAATTATCGCAAA
ATTATAACTTTCATGTAATGTAATCCAAAAAACTTGAACACTGTTTTGGG
GATCTGCCAATCGAAGAAGTAATTTTTTTTTAATTTTAGTATTTTGTTTC
CCCAAACAAACGGAAGAAAAAGAAAAGCAAGTAGTCTCAAGAATCCTTTT
ATGAAGGACACCTTTACAAGAGACTTCTGTTGTCTCCCTTTCGTGAACTC
AGCAACAACACCATCCAGTCAAATGGTATTAACCCTGGAATATGCCGGTT
TGGGTAGGAAAAAGATCACATTTTCAAATGGAAGCACACACACTGAGGTA
GTTTCACAAATATATTCTACTTACCCTCGGCTGAAAAATGTTGGAATGTT
CACACTACATAAAGCAAAACATGGAGGGAATGGTCAACCCATAGAGGACA
TCACTTTAGGATCTTACGATGTTGACTCACTTCGGAAGCGATTTAAAACA
AAGTCGTTAATTTACCTGAGGCCTCTACAAAAGAATTTGGACTTGACAAT
GATGGATGGAAGTGAGGTTAGCTGGAAATATTTATTACAAATTCAAGAAC
TTTTTCTTTATTCTTCATCTGATTTTGCCCCTTTTTGATGTATGTGAGAA
GATTAAAAATTTCAATTTTGGCGGAAGGACCATTTTTTTAAATTTTGACT
TGGGAACTTAATTTATATCAAGGTGATCCGAACAAGACCTTGTTGTTTTA
AAGCAATAAAATTAGCAAACCTTCTTTAACCATACTTCATTTTGCAAACT
ATATTTTCAAGCTTTTCAAAATTTCAAATTTGATTTAAGGCATTTTTATG
TTAATAATTGGTCAGCCTAAGCTGAGCATTCAAATAGGTAAAATTCAGTT
CCATAAGACGGTAAAAAAAAAATCCGATTTCCCGATCTCAGTTTGATTTT
AAAACTTTCTTCCGATCGGGTTAACTTTTTGGGTACTTTTAGCGTGCGTT
GTTTTTACAGATCATAATCATAATGTGGTGTTTCAAGATGGCGGCTCAAG
CGGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNACTCTGTTTCAGTACATCTCTTACATCTGTTAACCCACTTATTAAAG
CTATCTAGCTAAGCTCTATTGGCTGACCTTCCAGCCTCGGCTGGTTTATT
TTCATATTGGGAACTGCAAAATCATCAAATAGTTGGGGAAGCAAATAAGA
GGGGGGGGGCAAAAAATTTTGAAATGTGTTGGAGGTAAAAATGAGAGGGG
GTCCCCCTATCTTCAGGATCACTACTACTTAATTAGAATGACTCCCTAAA
GTTTTACCCTACTACCTTCAACTGCTTTAACTTGGGACTTTTTGGTAAAA
CATGGGATGGCAATTCGGCCACCATTTCACCGAACCTCCAAAGTCATTTT
TTTATGTTAATGAAAAGCCTATTAAAAAATACAAGATTTCTCTTTTGCAC
CGAGTAGGTTTTTAAATTGAAATATGAAAAAAATCGGTAGTGGAACACAC
GCAAATGTCTGGAACAAAGAAGACCATATTAGTGGTGAAAAGATAGAGTG
TTTGACGTCACTTGCGCGGCAAGTTACACATTTTGTTAATCCCATCAGGC
AATAGGCGGTTAGGCGGCTGGTGTTCTCTAATTCTCCAATTGGCGTCCAG
TCATTTTGAATGAAAACAAAAAAGTTCAAAAGGGCGCGCTATCAGTGAAA
GTTATTGTGACGTGTTATGACAGAAAGTATGATTGATAAACTTGTTGGAG
TTATCAAAACAAATTTGTTGTCAAAAAGATTTAACAGTGAGTGAAAGTAC
AGGCCAGAATATCAACAGTCCCATGTTTCGACCAATCGTCCCAGGTTAGA
GCAGTTGACAGTAACAGAATAAATTTTAGATGTCATCCAACTTAAGCGTG
AAATTCCACTGTTTTTACAGGCAAACAAAGAAAATCAAAACATTAAAGGG
GCGGCAACAACAACATGCTTCCGATGCAAAAAAATGATTCCTTTGAGAAG
ATTTTTAGAACATCAAAGTTCTTGCAAGTAAGTCATCATATTTTACATTT
TAATGGGTCGGGTAATACTAAAATATGCAATCCCATAAATGGCAGAAGTT
TTTCTTGTGTCACGTGGTATTTTACTGCCAAACCTAAACATGTTATATAT
TGTTGGATTACAAATTTAATGCTGATTAAAAAAAGTCATAACTATGGTCT
AATCTAAAATTTTAATTTCTGGAGATAAGAATCACTTTCAATTTCTAATT
TTCACCTTCGATTTCAAAACTTTGAAATAGATCGTCAAAAAATCTCAATA
CTGAATGTTTCACAAGGTTGCCTATTTTGTAACTTTTTTTTAGAAAGACT
ACTGCTACAATGGTGAATTATACAGCTGCTACAGCTACATCCCCTGTGGT
GATGCCAATCTCTATGAACAATGCAGAGTAAGTTTATTTCTCTTTTGTCA
ACAATTAATATGATAAAAAAGGGTGTGTTGATGGTGTAGATTCTATTATT
TCTGAACTCAGGAAACATACCTCACAAGGATGGGAAATAGTAATGCCCCA
AATGTAAATGTATCCAGATTTTTAGAAACTATTTTTTCATAATTATAAAA
ATGTCTAAAATCTTTGAAAAAAAAATTTTTTTTTCAAGTTGTTCTCTCCA
GTGACATGCAATATATCTATAATAGTGTACACTAACAGTCTTATTTGTTG
ATTCTTAAATAACTAGGCAACATTACTAGGGTGATAATTTATGAGATACT
GCAAACAATTTCGGGGAAAATTTTGGAGACTCAATTTGATTTTTTCTGAT
TCCCTACAAAAAGTTCTTGAAATCCACTGTAAATCAGCTTTCTAATGTAC
TTGAATAAAAATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNACACTGTATCTTCAAAACTACTTGAGATATCAAGGTGAAATTTTC
AGGGTCTTATTTTCTTGTGTGATAGATCATTTGGTCTAAATTTCAGCAAA
ATCCAAGAGGGCGAGGTATCACACCCTGAAGACTCTTAAAAAAAATGGCT
CTTAACTTGGCGGATGGTCGAAAAAGTTTTTTCAGATGGAATTTAATTTG
GCGGTTAACTTGAAAAATTATATTTTGCGGGAATTTAATTTGGCGGATGA
AGGACATTTTTGTTCAAAAAACACAATTAAAAAAGGAACAACCTGTTTTA
AAGCCTGAAATAGCACACATTTGGGGGAATAAATAGAACAATTTAAATTT
GGCGGGAATTTAATTTTGGCGGATGACGGAATAAATTAAATTTGACAGGA
ACTTAATTTAGCGGATTTCGACCAAATCCGCCAAATTAAGTTCCCGCCAA
AATTTCTTCCTTTAAGGTAAATGTTTCACAAGGTTGCCTATTTTATAACG
TTCTTTTTTAGAAACACTTCCGCTACAATGGTAAATTATACAGCTGCTAC
AGCTACATCCCCTGCTGTAACACCAATCGCTATGAACAATGCCAGGTAAG
TTCATTTCTCCTTGTCAACCAGTGTCAACAATTAATTTTAGGGTTTGTTG
TCGTGCTCCTTTAAACTTTGATAGAAATGAAATCACAAACAATAAAGAAC
AATTCATTTGTCAGTTTTTTTAAACTCATATTCTATAATCTGTGAAACTC
GAATAACACATTTTTTTGCTTAAATTTCTTCCAGCATTAAGGACACTCTG
GATGGTGATATCATCTGCTCGATATGCAAAAAAGGCATTTACATTCCAAT
AACAAAAGTCACCACATGTGATTGCAATTACCACTACAGTTGCGTAGAAG
GAGAATTGATGGACACAGACTCGTTCGAATGCCCAGGGTGTGGTTTAATG
GTGTCAAGGGTTCCTGAAGAAACCCTTCCGGTATTTCCTTTAAGAATTAA
CAAGGACGATACATTCACTCAAACCAAGGACACATTCATTGAAACTCTTA
TGAATGAATTGTGTGACCTGAACAGCGTCGATCCGATAGAAATTTTAAAG
TTTCTTCAGCTGAAGCTTGTGAAAGGAAGAGAATTACATATTCCAGATAT
GACAGTCTATGTACCAAAAGAGGATGAATCAGTTAACACAATTGCTGTTG
ACAGGGGTGCTATCATTGAATCTACATTCCTTGAGTTTGAAAGTATTGAG
GACTTCGCTGTCACCTTTGAAATTGACTTTATAGGAGAGTCAGCGAAGGA
TAATGGGGGTGTCAGAATGGAATGGATTGGCATTATTAACCGTGCAATCT
ATGAAAAGTATTTTGAAAAGGGACTAAGAACTACTTTAACCAAGGATTAC
TATTTTGTTGGTGCTATGGCTGGTATAAGCATTATACAAGGTGGAATTGT
ACCAAAGTTTTTTAGTGAAGAACAACTAAGCTTCCTTTTCGATGAAACAA
ATGAAGATATTGTTGGACCTATGAAGGAGGTTATCAAAGGGTTACAAAAT
TTCCATTTACAAACAGTTTTTCAGCGCTTTCCAATAATCAAGCACCTTTT
TCGGAAAAGCCAATCCAAACTGAGCCCGAAATTCTTGTTGAACAAAATCA
CTGTCAATTTCAAACCTGAAGGATCTTCGTGGCTCCCGCGTGAAAAGAAA
ATGTACTCATATTTTGTGAGATATCTCAGAGAGGTTGCTTCTGGCAGGCG
TGGAAATCATCTTTCCCTGCAAAATATATTGCGATTTATCACGGGCTGCC
CTGAGGTACCTGAATTGGGGTTTAGTGTCCCGCTGGCTATGAAGTTTGTC
AAGTCAACAGTAACCTATGTTATCAAAGTAAGTGTTGAACAAATGTAAAC
TATGATTATACTTTACTTGAGTCTTTCTTCATTGAAAATGATAGACGGGT
TTTTTTTTTGCTTTACCGTAACTTTTGTTCACGTTTCAGCCTGCAATTTC
AAACAAGGATGAGGTTGAACCAAAAGAAGTAGCTAAGGAAGGCGAAGAGG
AAAAAACGAGTGACGATGTAAAAAAAGAAGACNGCAATTTCAAACAAGGA
TGAGGTTGAACCAAAAGAAGTAGCTAAGGAAGGCGAAGAGGAAAAAACGA
GTGACAATGCAAAAAAAGAAGATGAAGAAGTTAAGGTGAAGGTAGTTGAC
TATCTCCCGAAAGCACACATTTGTTCGAATGAAATAGAATTACCGATTGG
TACTTTAGTAGACGAACTTCCTACAATGGAAAGATTAATTAAATTTTACG
ATTATGCTTTTTCAAATACATACTTGGGTAATATTTAGACCTCATTAAGT
ATAGGACCATTTTTATCATTTTCTTTTATAGCTGTAGGTTATTTTTGTCG
GGGACCAATTTTTGCACGAAAGTTTTTTAAACTTACCCCTGTTAGTTTTT
ATTAATACATATCTTGGTAGATTTATTAAAAATGCAAGAATATCTTTTAT
TTTAATTCTCCGTTTTTAATGGTTTTACTATGTACAAAATATTTTAGTTT
TTTGTCATCTTAATCAAGATGTTTTACCCTAGTTATACATGTTTTAGTTT
TTTTTTTATTATTAGTTTTGGACCTACCGGGAGGTCCTATTTAACCTTTG
CTCGTTCGCCTGTGACCAACTTTTCTCGAGTTATTTCTGTTTTTTGACAC
AAAGGTGCAAAATGTCATGTCCAAAATGTGACAGAACCAGTTTTTTCTGA
AATTTTACTCAGATGTGTATTAGCAATGCTTGCAAAATCTGATTTTTGGG
GGAAAAAATTTAAAAAAAGATTTTAAATAGAGCATACAATACAGGGTTTG
GATTTCTGAAAAACATGTTTTACCGGTCCAAGATGCCGGAAAACCGTTTT
TCTTCTGTCATTTTGTTGAAATTTCATCAGTTTCTGATTTTCTTTAAAAT
GTGACGGAGTTGGAATTTTTGTCCGATCGATGTTATTTTTACGGTTTTAA
ATTGGACTTATTTGTTAGGTTTATTTGTTATATTTATTAAATTGACCGAT
GTTAAGCACTTTTAATTTCCACTTTTTCTAATTCATGAATCCGGATATCC
TCTGAAATAGCCAAAGTTTTCCTTCTCCTTTTGTTCATTAGCTCGTTCGT
TCTTTCTTTAGGATCTTTTCCACTATCTCTAAACTGTTTTCACATCTCCT
TTTGTCTAACTCGAATCATCAGATAGTTCCAATCGGCATCCCAGCTTTTG
ATTTTTTCCCCGCGTAGTATTTTTTATTTCTACTTTTTCGTCTCGTTAAC
CAAGTCTTTTTACTCGCAGTTTGTATTTCTTATTTTTTTTGCTGTACTTT
TTTACGACGTAGTATTTTCAACACGTTTATTTTATCTATTTTAAGCCAAG
TCCTTAATATTTGTGGGGTCTCCTATCCAGGAAGTATTTGAATAGACGAT
ATCGGCTTTCCGAATTCTCCCCGAATGATTACCCATGATGCATTGCGCAA
AAAGATTCACGGACAATATTGACTTACTGAATTTTTTTGCGCAATGCATC
ATGGGTAATCATTCGGGGAGAATTTCGTTAAGCCGATATCGTCTATTAGA
AACTGGGCTATAACATTTTTAACATTAGTTTCCTTGTACATATTTGATAC
ATTTTTGATAAAAGAGAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_015574XLOC_015574Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00027611-exon-sc0000636-1575043694:131020..131315TCONS_00027611-exon-sc0000636-1575043694:131020..131315Clytia hemisphaericaexon
TCONS_00027611-exon-sc0000636-1575043694:127283..127348TCONS_00027611-exon-sc0000636-1575043694:127283..127348Clytia hemisphaericaexon
TCONS_00027611-exon-sc0000636-1575043694:125962..126024TCONS_00027611-exon-sc0000636-1575043694:125962..126024Clytia hemisphaericaexon
TCONS_00027611-exon-sc0000636-1575043694:125685..125756TCONS_00027611-exon-sc0000636-1575043694:125685..125756Clytia hemisphaericaexon
TCONS_00027611-exon-sc0000636-1575043694:124222..124287TCONS_00027611-exon-sc0000636-1575043694:124222..124287Clytia hemisphaericaexon
TCONS_00027611-exon-sc0000636-1575043694:123929..123973TCONS_00027611-exon-sc0000636-1575043694:123929..123973Clytia hemisphaericaexon
TCONS_00027611-exon-sc0000636-1575043694:122850..123276TCONS_00027611-exon-sc0000636-1575043694:122850..123276Clytia hemisphaericaexon
TCONS_00027611-exon-sc0000636-1575043694:119589..119695TCONS_00027611-exon-sc0000636-1575043694:119589..119695Clytia hemisphaericaexon
TCONS_00027611-exon-sc0000636-1575043694:119228..119272TCONS_00027611-exon-sc0000636-1575043694:119228..119272Clytia hemisphaericaexon
TCONS_00027611-exon-sc0000636-1575043694:117771..117809TCONS_00027611-exon-sc0000636-1575043694:117771..117809Clytia hemisphaericaexon
TCONS_00027611-exon-sc0000636-1575043694:116489..117581TCONS_00027611-exon-sc0000636-1575043694:116489..117581Clytia hemisphaericaexon
TCONS_00027611-exon-sc0000636-1575043694:116325..116376TCONS_00027611-exon-sc0000636-1575043694:116325..116376Clytia hemisphaericaexon
TCONS_00027611-exon-sc0000636-1575043694:114698..116233TCONS_00027611-exon-sc0000636-1575043694:114698..116233Clytia hemisphaericaexon
TCONS_00027611-exon-sc0000636-1510915933:131020..131315TCONS_00027611-exon-sc0000636-1510915933:131020..131315Clytia hemisphaericaexon
TCONS_00027611-exon-sc0000636-1510915933:127283..127348TCONS_00027611-exon-sc0000636-1510915933:127283..127348Clytia hemisphaericaexon
TCONS_00027611-exon-sc0000636-1510915933:125962..126024TCONS_00027611-exon-sc0000636-1510915933:125962..126024Clytia hemisphaericaexon
TCONS_00027611-exon-sc0000636-1510915933:125685..125756TCONS_00027611-exon-sc0000636-1510915933:125685..125756Clytia hemisphaericaexon
TCONS_00027611-exon-sc0000636-1510915933:124222..124287TCONS_00027611-exon-sc0000636-1510915933:124222..124287Clytia hemisphaericaexon
TCONS_00027611-exon-sc0000636-1510915933:123929..123973TCONS_00027611-exon-sc0000636-1510915933:123929..123973Clytia hemisphaericaexon
TCONS_00027611-exon-sc0000636-1510915933:122850..123276TCONS_00027611-exon-sc0000636-1510915933:122850..123276Clytia hemisphaericaexon
TCONS_00027611-exon-sc0000636-1510915933:119589..119695TCONS_00027611-exon-sc0000636-1510915933:119589..119695Clytia hemisphaericaexon
TCONS_00027611-exon-sc0000636-1510915933:119228..119272TCONS_00027611-exon-sc0000636-1510915933:119228..119272Clytia hemisphaericaexon
TCONS_00027611-exon-sc0000636-1510915933:117771..117809TCONS_00027611-exon-sc0000636-1510915933:117771..117809Clytia hemisphaericaexon
TCONS_00027611-exon-sc0000636-1510915933:116489..117581TCONS_00027611-exon-sc0000636-1510915933:116489..117581Clytia hemisphaericaexon
TCONS_00027611-exon-sc0000636-1510915933:116325..116376TCONS_00027611-exon-sc0000636-1510915933:116325..116376Clytia hemisphaericaexon
TCONS_00027611-exon-sc0000636-1510915933:114698..116233TCONS_00027611-exon-sc0000636-1510915933:114698..116233Clytia hemisphaericaexon
TCONS_00027611-exon-sc0000636-1491911889:131020..131315TCONS_00027611-exon-sc0000636-1491911889:131020..131315Clytia hemisphaericaexon
TCONS_00027611-exon-sc0000636-1491911889:127283..127348TCONS_00027611-exon-sc0000636-1491911889:127283..127348Clytia hemisphaericaexon
TCONS_00027611-exon-sc0000636-1491911889:125962..126024TCONS_00027611-exon-sc0000636-1491911889:125962..126024Clytia hemisphaericaexon
TCONS_00027611-exon-sc0000636-1491911889:125685..125756TCONS_00027611-exon-sc0000636-1491911889:125685..125756Clytia hemisphaericaexon
TCONS_00027611-exon-sc0000636-1491911889:124222..124287TCONS_00027611-exon-sc0000636-1491911889:124222..124287Clytia hemisphaericaexon
TCONS_00027611-exon-sc0000636-1491911889:123929..123973TCONS_00027611-exon-sc0000636-1491911889:123929..123973Clytia hemisphaericaexon
TCONS_00027611-exon-sc0000636-1491911889:122850..123276TCONS_00027611-exon-sc0000636-1491911889:122850..123276Clytia hemisphaericaexon
TCONS_00027611-exon-sc0000636-1491911889:119589..119695TCONS_00027611-exon-sc0000636-1491911889:119589..119695Clytia hemisphaericaexon
TCONS_00027611-exon-sc0000636-1491911889:119228..119272TCONS_00027611-exon-sc0000636-1491911889:119228..119272Clytia hemisphaericaexon
TCONS_00027611-exon-sc0000636-1491911889:117771..117809TCONS_00027611-exon-sc0000636-1491911889:117771..117809Clytia hemisphaericaexon
TCONS_00027611-exon-sc0000636-1491911889:116489..117581TCONS_00027611-exon-sc0000636-1491911889:116489..117581Clytia hemisphaericaexon
TCONS_00027611-exon-sc0000636-1491911889:116325..116376TCONS_00027611-exon-sc0000636-1491911889:116325..116376Clytia hemisphaericaexon
TCONS_00027611-exon-sc0000636-1491911889:114698..116233TCONS_00027611-exon-sc0000636-1491911889:114698..116233Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000636supercontigsc0000636:114698..131315 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0	0	0	0	0	0	0	0	0	0	0	0	0.0328631	0.0379625	0	0.0386806	0.0497138	0.035549	0	0.0567451	0	0	0.0338865	0	0	0	0	0.0660152	0
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00027611 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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