TCONS_00027600 (transcript) - C. hemisphaerica

Overview
NameTCONS_00027600
Unique NameTCONS_00027600
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1982

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00027600 ID=TCONS_00027600|Name=TCONS_00027600|organism=Clytia hemisphaerica|type=transcript|length=1982bp
CCNCTCTCATCACTTGGCATTATGTTTTGATCTAATCTTTCATTCGAAAC
TTTAAAGAACGCTAATGGTGAAAGTGGAGCTACAAATGGTACTCAAAGAC
GTGTATATTTTCAATGTCTTATCACCAATGACTTACACCGATTTGAGATA
CAATCATAGNTGTATATTTTCAATGTCTTATCACCAATGACTTGCACCGA
ATTGAGATACAATCAGAGacgtttcgaatgttttcgaACTCATCAATAAT
GAATTCTAATGGAAAGCCTTGATCAGAAAGTATTGACGCGTTCACCATAC
ATTGATTTAACATCACAATCATATTGACCAAGGCGCACCTGATGCTTTCA
ACGAATGGAAGTCTTCATTCACAACATCCGCTATCGTGCGTTAAAGAAAT
GTTTGGGGACGTTTCGAAACAGAATTTTAGTTGCGTCCAAAGAAATACCA
GCCGGGATGTTATTCTCAATGGGATGAATTTGGTGACAACCTGAACAAGA
ATACACAGACAGTCAAAGAGAAAAGAAGATTGTCCTTAAATATCTCTTTT
TCAGCAGGTCAGGGGAACGCGATGACGGACCAGTCCGAAATATTGCGAAA
AATAAAGTAAACGAGTCTGGTAGATTGACCGAAAGATTCTAATGTCAGAC
GAAACGAACTAAAAGCGTCGCAGCGTCCTCTGCCAATCATCTGTTTTATA
TTTTGAGTAAATAAATATCTACGCTCATGGTATCATACATGAAGTTTAGA
GCTCGATGGTTACATACGGCTGACGGTATTTATCAGAGTGATTCAAAATC
GATAAGCGGCATATAACCCAAAGCAATCGTCAAGCTGTAATGTGGGATGT
TCTTCCTCGATCTTGGAATAATCTCTAACAGGATACGAATTTGTGGCATG
GAGCATCCCCAATATTTTGGCTTCAACAACCTGAATTTGATTGGTGGATG
AGAAAAGCTATAATAATGGAATTGTTTTGACATAGCTGATGCAGTTACTT
GCTTGGTGATTGTTGCGAACCATTGATGTATTTATAAGAGTATTCAATGC
AATCGTTGAGATATGGTATGATATGCTGATGGATGGATTATCTAGAAGTG
ATTTCTTTGGTTGAATATAGCAGTGTATTCATTGATTTGAAAGATGGCCT
CTTTTTTAGCCCAGTCATCAACCGTGGCCAATGTTGCTTGACCTGTGTTT
CAAATCAGATCGTTCATTTCTTGGAATGAAAAATCGTCATTTGAAGAGCG
ATTGTTAAATGAAATTGTCTCGATATCAATTCTGTAATATTGGTTACCAA
ATCTCTAGTTCTTTTTGCCTATTGATTAAACTACTTTGGGTTAACTTATT
AGAGTTCGAAATGAATAGTTTACCTTTTCCTTCTAATCAATGATTTGTGT
AGAATTTAAACACCCAAACAAGCCTACATTCAACTCACTAGGATTTTGTT
GTGGTTTCAGTTTGTCCCAAGCTTTCAAACCTTATTTGTGTGAAAGGAGA
CATATTTTCAAAGAGTTTACTTTAATCATTTATCACAAATAGTGTTTTTA
CCAGTGTAAATAATTATTTGTGGCCTGAAAGGGACTTTTCTTTTGGACTT
TTCACTGCNGCAAATAGTGTTTTAACCAGTGTAAATAATTATTTGTGGCC
TGAAAGGGACTTTTCTTAAAATCGAACTTCTTTTTGGACACTGCCAGGAA
ATTCGAGTTTCATTTTGTGATAGTATAACTAAATTCTAGATGAAGTTTTT
CTTTGTCAGGATTGATTTTTATCAGCGTCTTACAACACTAAAGAGCATTT
TAgtaaggctggacttaaaaaattgttggtttgccgtcacccgaccgacc
ctaccttAAAACCTGCCtacccaaaaaaatttattgccattttaaagaag
aatttttttttttcttcaaaaacttcaaacaatcaaatcaaaactctTAT
CTTGtctgtctcaagcataagaatcgtgaATT
Run BLAST on NCBI

transcript from alignment at sc0000636:89388..102100+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00027600 ID=TCONS_00027600|Name=TCONS_00027600|organism=Clytia hemisphaerica|type=transcript|length=12713bp|location=Sequence derived from alignment at sc0000636:89388..102100+ (Clytia hemisphaerica)
CCNCTCTCATCACTTGGCATTATGTTTTGGTAAGTATTTGATATCAACTT
TATCCGGATTAGATGAATCGAGAAATCATTCTCTTGGCATTGGCTCGTCC
AACCCTCTCTCTGTGACCCGGTAATTATTCCCGTCCACGCATACCTTACT
GAATCGACGAGAGTTTCCGGTTAACCCTGTTACAGTgacactgagacagg
ggtgtacagaTATCGATAAAATCAGCGTGTTAACGATGAGACAAGGATAA
ATAGTGTTGGTTTATATTTGTCTCATCACTAACACGCTGATTTTATCGAT
AtctgtacacccctgtctcaatgaccATTCGAACATTTCCCCTATCATTT
TTACTTGATGAAAGTTTTTGGACTCCCTTGTCTAAGTGACACGATGAGAA
TTCCAATTCAACCTTGTCTTGCGACCCACTGATTATTTCCATATGTCCCT
GCTTCGATATCAAATattaaacaaagaaatatcGTTTAAAAAGCATAACT
AAAAATACACTATGTAAATTTTCAGTATATTTTCACTTTCATCTTTTATT
CCCTTCAGATCTAATCTTTCATTCGAAACTTTAAAGAACGCTAATGGTGA
AAGTGGAGCTACAAATGGTACTCAAAGACGTGTATATTTTCAATGTCTTA
TCACCAATGACTTACACCGATTTGAGATACAATCATAGNTGTATATTTTC
AATGTCTTATCACCAATGACTTGCACCGAATTGAGATACAATCAGAGacg
tttcgaatgttttcgagtaagtttttttgtttaaacCAGTACCGGTGTTT
TTGTAAGGAGGCCAACAAGGTGCTGCATATTTCTTGTACGTTGTTTGGAC
AAGCGTTGGGTAGcttttttctgattattttgaaataaagcaTGGCATGA
CCTATTTCTTGGTATGCCGAGATAATATTACACTCCTCCTTATAAATTCT
GAGTCTCCTGCATATCCATAACGAATGTGTTAGGGTTGAGATTATTCTTA
CCGTCTCAGGGATCTTAAGATATAATTCAAAAAGATAACTCTTTGGGCTC
AAAAGACAAAGTTGTTCCTTAAACGAGACAGAGATTGATTCACAGTGCCC
TTTTTTATTTCAGACTCATCAATAATGAATTCTAATGGAAAGCCTTGATC
AGAAAGTATTGACGCGTTCACCATACATTGATTTAACATCACAATCATAT
TGACCAAGGCGCACCTGATGCTTTCAACGAATGGAAGTCTTCATTCACAA
CATCCGCTATCGTGCGTTAAAGAAATGTTTGGGGACGTTTCGAAACAGAA
TTTTAGTTGCGTCCAAAGAAATACCAGGTAAATAAAACAGTTATagacac
cctcttctcacaaactttttcagccagtgggggtaaaattaaTAGACTGA
AACTCGAAGGGGACTGATATTCCTATGTTTTTTATAGAATTTGAATTGCA
TTATTTTCAAGCCATAAAATTTAGTCGGGATGgaaaaaaatagcataata
ttttgcagtgagaatttacttatctgattattttcagcggaaCAAAAATT
AAGAGTACAATTTTGCActagggacgatatttttgccaatCTTTCCGCAG
TGGAGAAGGGAGAACTTATGTGTGTtgcttaagagccattttcttaGGGA
TATGGACAACGTCAGGAAGAAATTTCCTcagaattgcttcattttcaaat
attttgttcaaaacCCATGATTGATgcaacctgtcaaaattttgaatgtt
tgaaaTTCATATCAGATAGTTGGAATTCGGTTTAggtctttcttttttct
ttttgatagaaTATGGAACTACTATTTGATACTTGGTGAAAATTTGAGTC
CTGAAAACCATTCTGTCGCAACGAATTCAacatattcttttatcattagc
tGAGTTTTTGTCACTTATTTTCCGTTTGCATGAGCCCTAAAAAATCGACT
gttccccaattttcaaatcgcttcagggcgtcttggaataatggccgttc
atcaacaaaatttcgaggattccttaaaacaactcttttggaaattgatt
tttgtaaaaaacaaaatcaaaaacaaggcgttttttagccatttgaaaaa
gtcaaaatcaaaattttctactcTTACTACTCTTTATTTCTACATTTGGA
AGACTAGGGAGCTGGAGTATTTCTTTTTGTGGTATTGTTCTCGAGAGGGA
GATACCACtctgaaaaaaaactaaattcctGTAAAGAGCCATGTCAACTG
AGTAtctaaaaaccttgaaaagtgccaaagtttttgccaaaaaaccttga
aaaaccacttaaaaacgaccaaaaaaaccttgaaaaccttgaaaatcccg
aaaaaaaatccgtagacaccctgcTACGACATGTTGGTTTTTGGACTTTT
ATATAGTCTTTCAGTGGATATGTTTTTAGTAGTGAAGAAGTGGGTTATGA
TGGCGGCTTAAAAATGACCTTTAGTGTAAAATCTCCATTCTTCCCCAGTC
CATTTCAGCCAAGATCCTCAGTTGTGAGGTGTTTATTAGGTTGTTTTGGA
CTCTCCAGACAGACATACCTTTTGACAGTCGAAAAACTACAAAGATGTCC
ATATGGTCTAGCCTCGTTAGACCTGTAGAAGGCTGAGAAAATAGGCTTTT
TAGCTTGCGTAGGATTGCCCTTAGCAATTTTGGTAATCAATCTTGGTAAT
CAATCTTGGTAGCAATCTTGGAGATTACAAACCACCGTACGAAATTGTAC
CGATTTTTTGAATGGCCACCCTGATTTGTGTTGTTTACTATGTCTTTGCT
TTTCATGTAACTAAAGTAACGATTTGCTACCAATCATTTACACCTGTTCC
TATTTTATTTTAATCATGGTAGCCGGGATGTTATTCTCAATGGGATGAAT
TTGGTGACATGCAAAATGTTTTTGCAGCTGTTCGCGAAAGACAACCTGAA
CAAGAATACACAGACAGTCAAAGAGAAAAGAAGATTGTCCTTAAATATCT
CTTTTTCAGCAGGTGAGATGAGGTTTTTGCTTCAATTGATGGGTACACTC
ATCAGAACATTTGAAAATGTTCACcttcttttgataaaaatgtgCATTAT
TTGGTCCCAaattgcatttttctaaaatgtacCACAACAAGCTAATTAGA
GAGGGTGCTTAAAAAATTGACTTGATACGCAACCGTTCCTCAATTACATA
TTTTAAACACTTTGTAGGTTTAGGATTTTGTTAGCTTCgataaagatttt
aaaacacAGAGACGAAGTTAGATCATCCATTAATGACGAAAACAATAGCG
TCATCCTTCCAGctgcggctttcttatacttttTGGTATCTTTGTAACCC
TTAGATAGATTCTTGAGGTTtgaccaatgaagtaaaagcccgaaaggcta
gaagtGAATCTCCTACGTAGGATTTGAAGCTGCTAAACCCTACCTAAGCT
GCGCGGCCTTGAGCATGACCCGGTGTAGCGGATTATTTTAACTCCCtgta
aatgttgacccccccccccagttaaTATAAACTAGGAAATAATGACTCCC
CTAGAGTAGAAATTTCCTGGGAAATATTGACTCccttagtaaataatgac
tccccTTAAAAAAGCTGAGGGAGTCAAGATAAACTAGTTTatcatgaccc
cccccccaaagtAGTCATTGTTTGTTCACACTACTTTACTATATATATCC
ATACATAAGGACCCTTTAGCATTCGTATTTGAATATCTTTGCAAAATATT
CTTCCTTCGCCTTTCTAATAGATCTTCCAGGTATCATTTTAAGGTcctta
aagaaaaacttttgtaCGTTCCTTTGTTTTATAGCCGTGTGATCTGTTTG
TTACAGTTTTTACCAAAGttgtctttttatttatacaGTACGTTCAGGAG
AAATTAGTCCTCTGTTTTAAAAGTGCCATAGCCTTcgatagaaaaattaa
tttctcaTAAATTTTATACCGTTAGAAAGGAAATCTTCCCATCCATTCAA
AAGTACAAAGACTTTGCTCAAAAAGATttctaaaacttaaaaatcaagtt
tttaacTAATAACGATAAATTAACTTGACTTATCAAAAGAAAACCGGTTT
GAcaacttttaaaagattttagttttagatttttaaaaaatcagttAAAA
ATTTTTACATTGCGATTTTTATACCATTGTAACCCTCGTAAAATTCCGCA
TCGAACCATGTAAAACTTTTCATAATAGCACAATTATTTAAAACTCTTTA
TTTATTAGCACAATACATGAAAAGGTTATAAGCATAATTTCTTATGTAAA
ATGAtagatagacaaaagatttaatTGATGATTACGGAGCCACTGAACTG
TAGCATTGCTTAAATCGATGTTGtgaagctttttttataaaacttatATT
TTTAGAAAGCCTGATAAATGCTCCATCTCACTGTggaagaatttttaaaa
ttggcCGAAAATTCGAAAAGCTATACCACTTCAAAGACGGAGGACTAATT
TTTTTATGGACGTATTGTATATAACTTTCATCACATTGGGAttactgtaa
atatttcttctaAAAGATCACTGTGACAAGCGCATTCTCTCGTTGATTTC
TATTGTCCCctgttttttagattttaaaccTCTTGAGAATTGCTTTAAGA
TGCTAAATTTTGTTAATTCGTTACTTTTCTCGTTCAAGGCtatgaaataa
gaattttttgcagAGCTGATTTTCGTCGTTGACACCCACCCTTTgccgaa
attctttcatttttcaagggACTTTAAGAATTTTCAGAATGTATGGTATT
CCGCAGAACAGATTTTTCACGTAATTGTCGGTAGACACGAAGTTTAAACG
TTTATTCCTCATTCGGTTTCTCGCCAGTATTTTGTAACANNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNACAA
AGAGGGAAGTATACAGTATACAAATTTTGAGCCAAATCTAAAAATTCTTG
AAGGAAATGCTTCCCTCAGATGGAGTATTTCTCTTACGGGGGTCTGATTT
CCTAGGAAATAGCAACTCTAGGGAGTCTTCATTTACTAGCTTATTTTGAG
GTGGGGAGTCACTATTTACTAGTTTATTATAACAGGGGAGTCATTATTTG
GggagttaattttttttgtcacaCCGGCCCGTCGTCAAAGCTAGCGATGT
atatcttaaggcttcacttttccttgcctgggaaaggttaatgattcgct
tctagccctttgggcttttacttcattggGTGTGACATTTTTGTGCTCGA
TATTCAATGTAATCATATTCcgaaattcatatttttctaGGTCAGGGGAA
CGCGATGACGGACCAGTCCGAAATATTGCGAAAAATAAAGTAAACGAGTC
TGGTAGATTGACCGAAAGATTCTAATGGTGAGCTTCGTGTATTGCTTTag
aggattttttttttttttgtgagaTATTATTACCCCTTGATCCAGAGAAA
TGGAAAGGAATAGAAAGAGCGCTTCTCGAAAACTATGGAAAtattgccct
taagggagtttgtttcgggttaatggatttcttttgttgtcgctctAAAA
ACTTTGTATAATTGGCGTAATGTGactaaattcttttgtttcaggtcAAA
TAATGCGAGAACTTTAGGGGCTAATAGTTTGGGACACCTCTTTCTTACCA
AAATACCTATAATTTCTTGCTCAGAATATTCTAGCGATTCTATAATGATA
TAACGGCATCACGACGGCATAATTATAGATAAAAAGATAAAgtgtgagaa
aaaaagaaattaaatctgtttttaatgaatttcttgcAACTTTTCTCGAA
GTAACTTGATATCatcttaatgaaaatttttcagactacGAGTTAGCgta
aaatttgttactggaTACTGAAAAACTCAAGGGTAATGGAtcagaaacaa
aaaataccGATCCTTTTTTATAAACATAGCCATAAGGAAACCAGCACTCT
TCGCATGACGAGCCGCTTTTTTCTGAACCTTTTCTTATTACCTAATTAAA
GCCAAAACAAAGAAGATATCAATCAATCAGTTATCAGAACCCTTTGGAAG
CGCTTTTTCTATTCCTTTCCATTTCTCTAGTTGATATTCCACTCGAGAGA
TCCAAGCTACCATAGTTGTCAAAGTTTGAATCAAAGATATCCCGATACCA
TTTGTTTACTTCTAAGCCTACTCATTTAGTGTGttcaaagaacattttaa
aattgATGTCTTACTGGAATGTTATTCTTATTTGCTGAATGGTCAAATAG
CCATCCatgtttggacattttcttgttgACTTGAACCAAAATACTAGCAT
GTGCTAAACCTTCGCAGAAAAAACAGTACCGTTCGTTACGGTAAGATTTA
GCGGTTACCTGAAAACCTTGGTCATTCCCTTTTTATTCGATGCTGTCGCG
ACCTTTTTAGCGGCAACGGATCCTTAAATCTAATTAGATGTATGCACTTT
ACCCAATTTCTATGACATCATTCTTGCTTTTCCAGTCAGACGAAACGAAC
TAAAAGCGTCGCAGCGTCCTCTGCCAATCATCTGTTTTATATTTTGAGTA
AATAAATATCTACGCTCATGGTATCATACATGAAGTTTAGAGCTCGATGG
TTACATACGGCTGACGGTATTTATCAGGTAAATAACTTTGTGATCATATT
AGATTTCAACAATAACCTACTAACGCGTGGTTACTGGAGAGTGATCAAAT
TGAAAGCCCGACGTTGTCCCCAAGAACCAGTGTAGACTTGAAAGCCCATT
CGGCAGCGCAGTTGAACTACTGTGAggttgatgatgatgaatagTAATCA
ATAATGAATTATGCAAAGGAGGTTGGGACTGAGCCAATACGATGTTGATG
AACTGAAAAATGAATAGACATCAATAGAGTGGGGCTCAGGCCCTCGAGCT
CAGACCTCTGAATAGGGCGAGAGGTTATGAGtgagaaaaggaaagaaatc
agGGACTTGAAAAGGAGAACTTGAAGGAGAAGGACTTGANAAGGAAAGAA
ATCAGAGACTTGAAAAGGAGAACTTGAAGGAgaatagactagtaaaccac
gtcgttgtatttcgctgcagattaaactttcaatgggatctatttttttt
atatgttcactgaatacaacgACTAGTTCCAAAAGGTGCTATTTATTAAA
TAAACGGTGGAGTGCTTTTTCTACCGCGGCGGAGTGCTCACTAAAAACAG
CGCACTCACTCTCACGGAttagaataaaaaagtaaacaaaactcggtact
ttttatgctttattatttttttttatgagactttCTCTTGAAAAACTAAT
TGCTGAACTAAATTAACAGCGTTCATGAAGCCCCTAAAAGGcctaaaata
gtttttttgaaaacttgttttttattttgttaaatgaGAGGTGTTTTATT
TATCATCTTATGTGCAACATTTGGATATACAATTTAATtcactcaaatca
aaacaaactcacatcctgattattttttgactttaatgtattataaaaga
aggtgagtaCAATGGAATATCAGTCAATTtagaagcttttttattttgaa
aaaattgaaagtactTGAAAGTTCTTTCTTCCATAATTCATGCATAAATG
CACCAACAAGATACCAACGACAAGACAAGGAGTTAAATAAAACTAttcac
aaaaagtatgatttgtTTGTCTGAATGAAAAGAATATAAACTGAACTGTA
ACTGCCAGCTAGGTAacccaaaacaaaaatatttaatataaggggaaaat
ctttttcaaaagaaaaagataaacatCTTTTAGAAAAACgacatcaaaaa
tataaaatatcaggCCACTGCAGgcataagaaaactttttttttgtggaa
gctaaaaagaaaaatactttcaaaaaagcaacagcttttacaaaatataa
aattatatGTATTTGTTCATATTGACCTCCAATTTTGCTATAGAAATTAT
ATATAGTATATACCTACAACATAAAATTACTTCCAAAtccaagtagattt
ttttttaaattggcaaaaatccaatcaaaattttcataaattttataagT
ATATAAACAGTaagttttgaaagactttaaCAGTCAGTAACAGTAGGTAT
AAATTTCAGTCTGAACTTGTTCAACAACACCAGGGGACTACAAAAAATTA
CAAGGTAGAAGtctgcccgggggggggcactatgACCTTGAtgaccgacg
gggacgtgccgcgctgtagtttgaaaagtggaccctgtgagatatgaatg
tttggtaaatttgggaccttTCAGAAAGATGAATGATTCGGTCCAAGAAA
ATTTGtgaagtggcaaaaatgacttaaaagtagaagaaaaattcaaatat
tttctaatttccaccctaaAAATTGTCTGAAACGACCAAAAATCGACCCA
GTCAGGTCTactatcttgaaaattagtacaaATTTGGGACCCTATCAGAT
TCTGAAAAAGGGAACCTGATCAGTAGCATGTCCTCATActtaattttgcc
taagtgccccctgGAAGTCTGCCAGTAGTGAAAACCCAAAACATCCTCGT
ACATCTAACATTTAGCGTCAAGGGGAAATCCAGTTAAACGACGGGCATCA
GAAAACCCAGAAAACCAGTAATCTCAATGtaaaatgttgttattttcatt
cACAAATAGAACCAAGATGTGTCTACAGTGGTCAGCTTGTCAGAATATTG
TTTACATAAAAAagcattcaatttttaaattcgaaattaccactttcact
tttcatcatttccacACCAAATATTGCACCACCAAAAATGTTGTATAAAT
ACTATACTTTCCATCTTAATTTTTGAGGATTTCTGTAGCCATTTCGGAGT
TACATTCTCTATGGGATAAGGTTATCAAGTTCAACTTGTGCTGTAGAAAA
AAGCATTGATCTGTTACCCAATGAATGTGAGCATATTAACATGAACATTC
CCTGCAAAAAGTTTATCCTGCATGCAGTCATATAGTCATGGAATCTGTGT
TCAGTTGTGTCATAGTGTCATAATAAATATCTGTAGATATTGCACTTGTA
TATACTATAGATTTACCAACGTAccaagccaacaaaatttcaaagatccC
AGTGTTAAAAGATGTCATGAATGTTTATAACCATACataatcaaaaaatc
tttcaatcacAACAATcacatgaaaaagtgaaagtataATCCATATTTTa
tgagtttgtttgttttttgaatatatcAACGTCCCAACCAAGCCAAAAAC
AATGAATGAATAAAGTACCTCAGATAGAGAATACCAAGACAGTTTAAATC
TGTGTTTATAAacattaaagcattaaaaatctTCTCTTCTCAGTTTAGCA
AAGAAGTTGGAGAAGTCCTCGCCACGTTTTTCTGTTagtgtttaaatttt
ttttctcatccaTAACTCCGAGAAACTCAAATATTGCGATgagaatagaa
gaaaaaataagccgTGTCCATTCATTTTATCTTCCCTCTTTTTCGAGGGA
ACGTTGCCTGAGATTAGATTGAAGCAAAATCCCGTATTGCACCGTTTGGA
ACTAGTCTGTCTTTCCAATCCACTTTCCCGCAGCAattcctattttttat
aagaactctttattatataaGCACTATTCCTGCGTTCCTGTGTctaagga
aagacagacgcttgctagtctagaAGGAGAAGGACTTGAACAGAGACTAT
CGTTAATTACATGCCAGAGTTACTAATTTATTTGATGTTATTTATGTTAC
GcttatttgatatttattgcTTAATTGGAGAAACAGAATTGATGTTGATT
GAAATCTATTAGCGTACCTTAACTACGTGTCCATAGACTTAGCCCCAATA
AGGATATCCTGATCGAAGGAACAGATAAGTGATCTGCGAGGTCCCCTCAA
TAACTAAAGGGTGACCCCAATCGCCTAACTTCCCTTCGTCACACTACTAA
TGCGAAAGTCGTGAAATTCCACCCTTTTTGTCAAACATCTAAATGCGAGA
TTAAGTTTCAAGGTAACTTCATTTCTCTTCTTTAAAAGgatgtatttttg
aaaatggcaaaaaaatattgaagaataAAATGAAGACTTCCTTAAAATAC
CTGAAGgctgaaaagtttttattttaaatcacctaatctttcttttgata
cagAGTGATTCAAAATCGATAAGCGGCATATAACCCAAAGCAATCGTCAA
GCTGTAATGTGGGATGTTCTTCCTCGATCTTGGAATAATCTCTAACAGGT
TAGATTGGGTTTTATTTGTCTATGGAGCTGCGATTATCCAGTCTCTTGCC
CTCTATCTGTTTTTATATGTTCACTTTAGTACATCTAATAGTATGATGCT
AATGATGTTGGAAGTAAAGAGAAAACAAgcaataccgggtgcgccacaaa
aaagtttctctctttgaatcTGACTTTTTCGAAATCTAAGAATTAAGAAA
CAACAATCCCTATTCcatcagaaagaagaaagataaacttaaattttgat
ggttcatttattaaattcgattcattggatcaaaagttatgctcaattga
ataaaaaagttactttcagaaagtgcccgaaaacgttaaaaatcgaccta
ttaaatttttattttaaaattggcaatcgcaagaggctttacatgattaa
gaccattttttcagtgattaaacacataaattttgaaactgattgaacga
aagggtttaaattgttcattaaaatcattcCAATTTACTTTAACGAAATC
TTCCAcatatttttggttctagactagataaagtctatgtaaggctggat
gtacctcgaaacccatatttgatgtatttttttaaattttaccagatttt
ttggcttttttcaacgaatcttctgccttttattgaaattcaatcttcct
ttaaataacaaaaggtcatttagacagctaattatcatttttaatgactg
aaacgaaagtactgatgcatcatgttattatgcttctgtttaatttgata
ggtcgatttttaacgtttttgagtaccttcagaaagtaacttttttattc
aatatagTATAACTtccgatctaatgaaccgaattcaataaatgacccat
caaaagtTAAGTTTATATATCTTCTTTCCAAttgaataggaatggttctt
ttaaaaattttagatttcgggaaaattagttttaaagagagaaacttttt
tgtggcgcacccggtataattaTAGTCGAAAGCTTTAACAATAACCTTAA
TCAAACGGTCATTACGAAATCCTGTAATTCTCGTTTTATTGAATTCTAAA
GCCATGATGTTTGTTCAATTACCACTCTCGAATTTCTCAATGTGAATGAT
AGTAGAATTGAATCTTCCCTTCAACAAGTCCCACATTGATTTGGTAAATT
GTTCATTCGAGTTTTGTAAGAGGACgttcaaattttaatattctCTCTAT
ATTTTATTCCAGGATACGAATTTGTGGCATGGAGCATCCCCAATATTTTG
GCTTCAACAACCTGAATTTGATTGGTGGATGAGAAAAGCTATAATAATGG
AATTGTTTTGACATAGCTGATGCAGTTACTTGCTTGGTGATTGTTGCGAA
CCATTGATGTATTTATAAGAGTATTCAATGCAATCGTTGAGATATGGTAT
GATATGCTGATGGATGGATTATCTAGAAGTGATTTCTTTGGTTGAATATA
GCAGTGTATTCATTGATTTGAAAGATGGCCTCTTTTTTAGCCCAGTCATC
AACCGTGGCCAATGTTGCTTGACCTGTGTTTCAAATCAGATCGTTCATTT
CTTGGAATGAAAAATCGTCATTTGAAGAGCGATTGTTAAATGAAATTGTC
TCGATATCAATTCTGTAATATTGGTTACCAAATCTCTAGTTCTTTTTGCC
TATTGATTAAACTACTTTGGGTTAACTTATTAGAGTTCGAAATGAATAGT
TTACCTTTTCCTTCTAATCAATGATTTGTGTAGAATTTAAACACCCAAAC
AAGCCTACATTCAACTCACTAGGATTTTGTTGTGGTTTCAGTTTGTCCCA
AGCTTTCAAACCTTATTTGTGTGAAAGGAGACATATTTTCAAAGAGTTTA
CTTTAATCATTTATCACAAATAGTGTTTTTACCAGTGTAAATAATTATTT
GTGGCCTGAAAGGGACTTTTCTTTTGGACTTTTCACTGCNGCAAATAGTG
TTTTAACCAGTGTAAATAATTATTTGTGGCCTGAAAGGGACTTTTCTTAA
AATCGAACTTCTTTTTGGACACTGCCAGGAAATTCGAGTTTCATTTTGTG
ATAGTATAACTAAATTCTAGATGAAGTTTTTCTTTGTCAGGATTGATTTT
TATCAGCGTCTTACAACACTAAAGAGCATTTTAgtaaggctggacttaaa
aaattgttggtttgccgtcacccgaccgaccctaccttAAAACCTGCCta
cccaaaaaaatttattgccattttaaagaagaatttttttttttcttcaa
aaacttcaaacaatcaaatcaaaactctTATCTTGtctgtctcaagcata
agaatcgtgaATT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_015569XLOC_015569Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00027600-exon-sc0000636-1491911889:89388..89416TCONS_00027600-exon-sc0000636-1491911889:89388..89416Clytia hemisphaericaexon
TCONS_00027600-exon-sc0000636-1510915933:89388..89416TCONS_00027600-exon-sc0000636-1510915933:89388..89416Clytia hemisphaericaexon
TCONS_00027600-exon-sc0000636-1575043694:89388..89416TCONS_00027600-exon-sc0000636-1575043694:89388..89416Clytia hemisphaericaexon
TCONS_00027600-exon-sc0000636-1491911889:89946..90153TCONS_00027600-exon-sc0000636-1491911889:89946..90153Clytia hemisphaericaexon
TCONS_00027600-exon-sc0000636-1510915933:89946..90153TCONS_00027600-exon-sc0000636-1510915933:89946..90153Clytia hemisphaericaexon
TCONS_00027600-exon-sc0000636-1575043694:89946..90153TCONS_00027600-exon-sc0000636-1575043694:89946..90153Clytia hemisphaericaexon
TCONS_00027600-exon-sc0000636-1491911889:90501..90714TCONS_00027600-exon-sc0000636-1491911889:90501..90714Clytia hemisphaericaexon
TCONS_00027600-exon-sc0000636-1510915933:90501..90714TCONS_00027600-exon-sc0000636-1510915933:90501..90714Clytia hemisphaericaexon
TCONS_00027600-exon-sc0000636-1575043694:90501..90714TCONS_00027600-exon-sc0000636-1575043694:90501..90714Clytia hemisphaericaexon
TCONS_00027600-exon-sc0000636-1491911889:92260..92295TCONS_00027600-exon-sc0000636-1491911889:92260..92295Clytia hemisphaericaexon
TCONS_00027600-exon-sc0000636-1510915933:92260..92295TCONS_00027600-exon-sc0000636-1510915933:92260..92295Clytia hemisphaericaexon
TCONS_00027600-exon-sc0000636-1575043694:92260..92295TCONS_00027600-exon-sc0000636-1575043694:92260..92295Clytia hemisphaericaexon
TCONS_00027600-exon-sc0000636-1491911889:92330..92399TCONS_00027600-exon-sc0000636-1491911889:92330..92399Clytia hemisphaericaexon
TCONS_00027600-exon-sc0000636-1510915933:92330..92399TCONS_00027600-exon-sc0000636-1510915933:92330..92399Clytia hemisphaericaexon
TCONS_00027600-exon-sc0000636-1575043694:92330..92399TCONS_00027600-exon-sc0000636-1575043694:92330..92399Clytia hemisphaericaexon
TCONS_00027600-exon-sc0000636-1491911889:94828..94914TCONS_00027600-exon-sc0000636-1491911889:94828..94914Clytia hemisphaericaexon
TCONS_00027600-exon-sc0000636-1510915933:94828..94914TCONS_00027600-exon-sc0000636-1510915933:94828..94914Clytia hemisphaericaexon
TCONS_00027600-exon-sc0000636-1575043694:94828..94914TCONS_00027600-exon-sc0000636-1575043694:94828..94914Clytia hemisphaericaexon
TCONS_00027600-exon-sc0000636-1491911889:96023..96164TCONS_00027600-exon-sc0000636-1491911889:96023..96164Clytia hemisphaericaexon
TCONS_00027600-exon-sc0000636-1510915933:96023..96164TCONS_00027600-exon-sc0000636-1510915933:96023..96164Clytia hemisphaericaexon
TCONS_00027600-exon-sc0000636-1575043694:96023..96164TCONS_00027600-exon-sc0000636-1575043694:96023..96164Clytia hemisphaericaexon
TCONS_00027600-exon-sc0000636-1491911889:99691..99785TCONS_00027600-exon-sc0000636-1491911889:99691..99785Clytia hemisphaericaexon
TCONS_00027600-exon-sc0000636-1510915933:99691..99785TCONS_00027600-exon-sc0000636-1510915933:99691..99785Clytia hemisphaericaexon
TCONS_00027600-exon-sc0000636-1575043694:99691..99785TCONS_00027600-exon-sc0000636-1575043694:99691..99785Clytia hemisphaericaexon
TCONS_00027600-exon-sc0000636-1491911889:101000..102100TCONS_00027600-exon-sc0000636-1491911889:101000..102100Clytia hemisphaericaexon
TCONS_00027600-exon-sc0000636-1510915933:101000..102100TCONS_00027600-exon-sc0000636-1510915933:101000..102100Clytia hemisphaericaexon
TCONS_00027600-exon-sc0000636-1575043694:101000..102100TCONS_00027600-exon-sc0000636-1575043694:101000..102100Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000636supercontigsc0000636:89388..102100 +
Expression
No biomaterial libraries express this feature.
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00027600 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
back to top