TCONS_00027598 (transcript) - C. hemisphaerica

Overview
NameTCONS_00027598
Unique NameTCONS_00027598
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2319

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00027598 ID=TCONS_00027598|Name=TCONS_00027598|organism=Clytia hemisphaerica|type=transcript|length=2319bp
AACTTATGGTGGGccttctttttgtgctttggttttacAACGTCACCGTT
ATTTGTACCGTTTGAGCACTGATACATGTTGAAAGCTCATCGGAAGTCGA
AGGACAAACAAAATACAAACCTTCGTTTGAGGGCAAGTAGTTAACCTCCG
CCCAGTCAAGTCAAGCTACCAGTATTCAAGTGTCCTATCTCCTCTACATC
AGATCCACCCTGACCACCCGCTAGGTAACCTCCGGAACATACCATCTTGG
AAGCGAATCGGATCCAGGTTCCCTTCAAATCCACCGAAAAATAGCAGCGG
ACTTCCCTCTCATCACTTGGCATTATGTTTTGATCTAATCTTTCATTCGA
AACTTTAAAGAACGCTAATGGTGAAAGTGGAGCTACAAATGGTACTCAAA
GACGTGTATATTTTCAATGTCTTATCACCAATGACTTACACCGATTTGAG
ATACAATCATAGNTGTATATTTTCAATGTCTTATCACCAATGACTTGCAC
CGAATTGAGATACAATCAGAGacgtttcgaatgttttcgaACTCATCAAT
AATGAATTCTAATGGAAAGCCTTGATCAGAAAGTATTGACGCGTTCACCA
TACATTGATTTAACATCACAATCATATTGACCAAGGCGCACCTGATGCTT
TCAACGAATGGAAGTCTTCATTCACAACATCCGCTATCGTGCGTTAAAGA
AATGTTTGGGGACGTTTCGAAACAGAATTTTAGTTGCGTCCAAAGAAATA
CCAGCCGGGATGTTATTCTCAATGGGATGAATTTGGTGACATGCAAAATG
TTTTTGCAGCTGTTCGCGAAAGACAACCTGAACAAGAATACACAGACAGT
CAAAGAGAAAAGAAGATTGTCCTTAAATATCTCTTTTTCAGCAGGTCAGG
GGAACGCGATGACGGACCAGTCCGAAATATTGCGAAAAATAAAGTAAACG
AGTCTGGTAGATTGACCGAAAGATTCTAATGTCAGACGAAACGAACTAAA
AGCGTCGCAGCGTCCTCTGCCAATCATCTGTTTTATATTTTGAGTAAATA
AATATCTACGCTCATGGTATCATACATGAAGTTTAGAGCTCGATGGTTAC
ATACGGCTGACGGTATTTATCAGAGTGATTCAAAATCGATAAGCGGCATA
TAACCCAAAGCAATCGTCAAGCTGTAATGTGGGATGTTCTTCCTCGATCT
TGGAATAATCTCTAACAGGATACGAATTTGTGGCATGGAGCATCCCCAAT
ATTTTGGCTTCAACAACCTGAATTTGATTGGTGGATGAGAAAAGCTATAA
TAATGGAATTGTTTTGACATAGCTGATGCAGTTACTTGCTTGGTGATTGT
TGCGAACCATTGATGTATTTATAAGAGTATTCAATGCAATCGTTGAGATA
TGGTATGATATGCTGATGGATGGATTATCTAGAAGTGATTTCTTTGGTTG
AATATAGCAGTGTATTCATTGATTTGAAAGATGGCCTCTTTTTTAGCCCA
GTCATCAACCGTGGCCAATGTTGCTTGACCTGTGTTTCAAATCAGATCGT
TCATTTCTTGGAATGAAAAATCGTCATTTGAAGAGCGATTGTTAAATGAA
ATTGTCTCGATATCAATTCTGTAATATTGGTTACCAAATCTCTAGTTCTT
TTTGCCTATTGATTAAACTACTTTGGGTTAACTTATTAGAGTTCGAAATG
AATAGTTTACCTTTTCCTTCTAATCAATGATTTGTGTAGAATTTAAACAC
CCAAACAAGCCTACATTCAACTCACTAGGATTTTGTTGTGGTTTCAGTTT
GTCCCAAGCTTTCAAACCTTATTTGTGTGAAAGGAGACATATTTTCAAAG
AGTTTACTTTAATCATTTATCACAAATAGTGTTTTTACCAGTGTAAATAA
TTATTTGTGGCCTGAAAGGGACTTTTCTTTTGGACTTTTCACTGCNGCAA
ATAGTGTTTTAACCAGTGTAAATAATTATTTGTGGCCTGAAAGGGACTTT
TCTTAAAATCGAACTTCTTTTTGGACACTGCCAGGAAATTCGAGTTTCAT
TTTGTGATAGTATAACTAAATTCTAGATGAAGTTTTTCTTTGTCAGGATT
GATTTTTATCAGCGTCTTACAACACTAAAGAGCATTTTAgtaaggctgga
cttaaaaaattgttggtttgccgtcacccgaccgaccctaccttAAAACC
TGCCtacccaaaaaaatttattgccattttaaagaagaattttttttttt
cttcaaaaacttcaaacaatcaaatcaaaactctTATCTTGtctgtctca
agcataagaatcgtgaATT
Run BLAST on NCBI

transcript from alignment at sc0000636:76832..102100+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00027598 ID=TCONS_00027598|Name=TCONS_00027598|organism=Clytia hemisphaerica|type=transcript|length=25269bp|location=Sequence derived from alignment at sc0000636:76832..102100+ (Clytia hemisphaerica)
AACTTATGGTGGGccttctttttgtgctttggttttacAGTAGGTcactt
ttttggtttttcttaaagatatatcatagtaattggttatcaaagtaatc
aataacaatcaaaataCTTTAACGGTTATTGAGTCCTCGAAGgtttgtta
agaaagtgattgaAGACTCCAGCCCTGGCaattcaagtttttttatgGCT
AAATTTGCTGTTTGCCTGACGTTACACTCCTGCGCAAAATTTGCCTTCCC
CATTTTTTTTGCCGACACAAACACACTATAATCAATTTGCGTCAGCTTTT
GCCTCAGCATTTGTCGTATGCCAATTGCCAGGACTggactcacaattttt
ttgaaattttggtactcgaATCGAAATTCGATTGTTATATGTTAATTGAT
AAATAGTCGTCAAACTACTTAGATCATTGTCAATTACTTCAATAATCAAA
TTTATtctatacctgtaggcaaaaacagccgtCTGATAATCTATTATCAC
ATGgctatttttttattcaatttttttttgaaaatgtcatgGATTTTTGC
ATGTTTTATTGCTCTTGCtagaaaagaaacttttaaaatagttctattGC
CAATTTTACTTTACATTTTTAATGACTAAAACtgtaaaagtaattaaaaa
gttgataaagagaaaaatttcgaaCATTCGATTTTGTGAGcactttttat
tttgtaaaaaatgttttcaagtttttcttttgtttttgcctTTAGGTTTG
CCTTGGTGATGATATTCAACTCGGCTTTGCCTCTTTGAATATTCATCACC
TCgagttaataaatctcaataaccaacttttacctattgaatatctgctt
gttatcgattagtaccgtctgggaTTGTCATCTTACTGCTTATTTGTGTT
TGGAGAATTGAGGAGAAAAATGCTTTGATAAAGGTTTATATGAAACACTG
GATATTCTTTGTAAAACGTGGtatttttcaatcatttatGTGTCTTTCAA
GTTACGCCACGTTTCAGTTTGTTGTCAAAGTACTTTTGTTCGAGATTTGA
GAAGAAAAAGCTTTGTTGATAAAAAGAAtgatgagtttttttttttcaaa
agttttttttaattgatttctTTCAATCAATAAAACGAGTTCTCACTTAG
TAGTGAGTAATACAGTGTAATACTTGTAAAGAGTGTAATACTGCAAAATT
GATTTCTAGTTTTGTGCTTGTTAACTTATCTCTAGTATGTCGCCTTTATC
ATTTATAGAAAACAAGTAACAGAgacccggaaaacccgagttattttccc
gagttatttttccgagttactgaaaacccgagttatgacgtcattttcag
aaaattacgacGTCACACTCAAAtttataactcggtttttttttccctcc
attaaattttcgagttatttcatgaatgttaactcggttttttatcCTTc
cgttaaattttcgagttatttcaagaattttaactctgtttttttttctt
cctttaaattttcgagttatttccagattttgactcggtttttttttctt
ccattaatttttcgagttatttttcaagatttttaactcggttttttccc
ttcttttaagatttcgagttatttctcttcctttaaattttcgagttaat
tttcctttctttaaattttcgagtttaGAGATTTTAAACTagaatttaaa
aactttaaactttaaactttagaATTAAAAACTTGTCCCCAGTACCTTAG
CTGTAACAAAATACTTTTAAGAGGCTTTGGGGTCTGGTATCTACATCTAA
GTTCCAATCGAATCTAATTAACCTTTGAAAGAACGGTTTCCTGTTTTCGA
TTTTAATATacgtaaaaattgaaaaagattggaaagagaaaaaaaaaaac
ttttgaaacctgTCAGTGCAAAAGAACGTTTagacaaaatttcattattt
ttatcacTTGGGTTTTTATTCATCCAATTACCCAACTAAattaaaaacgt
aaaaatcacGAAAACGGACACACCCAGAGATATTATTGTTTGGAATTGGA
TTTTTCACTCCCTTGTTGTTTTATGTTGTTaaagaaactttgaaataaaa
agtgagAAATTGAAAGTGGTCCACCATGCAATAAAAATGGCATCAATTCG
CTAAAGCGTAAAGCGCTAAAATTTCTCCGaattatttaaaatttgaaaat
aactcgaaaatttaaaggaagagaaataactcgaaatcttAAAAGAAGGG
AAAAAAACCGAGTTGATTGATACATCGAGAAGGAACAGAGAagtaaataa
tttcaatttgaagataattattttttggggaattaaAGGGGAAGGCTCCG
CTTACGCTTTTCTAAAATCATATAAGTAACACTATAGATGCCAGGAANNN
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NNNNNNNNNNNNNNNNTCTGGTGAACGCATACGACTGACAGGGTGTAACG
GGCGTTTACTAGGGCGCCGGCAAAGACTCTCTTTTCAATTAACCTGAGTT
ATGAATAACTCcatttaaaaatcttgaaaaataacttaaaatattaatgg
aagcaaaaaaaaccgagttaaaatctggaaataactcgaaaatttaaagg
aagaataaaaaaccgagttaaaattcttgaaataactcgaaaatttaacg
gaaggaaaaaaaaccaagttaaaattcatgaaattactcgaaaatttaat
ggaaggaaaaaaaaccgagttataaatttgagtgtgacgtcataattttc
tgaaaatgacgtcataactcgggttttcagtaactcggaaaaataactcg
ggaaaataactcgggttttccgggtcTCTGTTACTTGTTTTCTATAAATG
ATANAGTAactcggaaaaataactcgagaaaaataattcgggttttccgg
gcctccaAGTAACAAAGCTACTTTGATTTTGACCATGActtctctttctt
tctaaaaagttgaaactttttctattttggtctCTGGACCAATATTTGAT
ACTGTGAAACACCTTGAAGATCCAACCAAAACAATGAGTTAGGCTGGAAA
ACTTggaaataaaacaaacaatgtCGTATAACATATTTTTCTGTTAGCTT
TTAACTTGAAAAGCATTTTCACAGAAAATAACTTCGACGCGTTCTTTCGA
TGATACAAAATACATCCATGCTTGAGACATCTGTTTAAGTTTTCACTTAT
GTCATTGAAGCTGATAGAAATCGTTTCATCCAGCCACTGACTTatcgaac
taaaacattgaaTCATCATTGAACTTCCCACGAACTTTGAACATTTGATA
CAAACTCTATAAACATTTCATCACTTATTTGCTCTTGAAAAGTAAAAAGA
CTTCATCTAAAAGATACAGCAAAAAAGTACAGCAGAACTTTTCCAAAGTA
CTCCATGCCAGTACGGTTAAGTTTTCGAGATCGCTGAGACAAATAGCCTT
TTTAACACATCTTTTAGAAGTAATTTTGACCTTCATCAAGTGTTTTCAAA
CAACCATTATATACACTTTTATCTCAAAAGACTGGGCAAGAAAATTGGAA
TAGTACTGAAATGATTAACTTCACAACATTATCAAAAAGAGCTTTGTGAT
GGTTGATGAATTAATCCTGATTGCCTGACATCGCTGGCTCTACCCTTGCG
TAAAATGGCAGTCAAAATGTTGTTAAACTGTGAGGGTAAGATATTAATTA
ACGAGAGGTAAATTCTAGTCATTTAAGAATTGAACGAACAAAATGATCAG
TCCACAAGAAACTACAAGAAATGATAGCAGAAGAACCACTTcctcttttt
cattcttctttcaCTCTGGTCTGCAAAATATTCATCGTTCGAAACTCTGT
GTTAGGgataattttattattttagtaccatgtgtactaaaataccaaaa
agggtggtcccttaaagaaatatttgaaaaatcttagtattttgttcgtt
ctaaaatcagccaaaatggagcatttttttaacaatcttggaaaaaattt
gattttttttttcaggaattttcgaaaaaattcttcagaaatctttcaga
atttttcaaattttttaaatagttcATGGCTTATAAGCAGGTCCTAGGTC
CCCCCTAAgaatttaggtgccccctaggaTTTAGGTGGCCCCTATTAGAA
AAATATTCTAGGTGGCccctaaaagttcaaaaatcgaaaaaagctaaaaa
ttgaaatcgtAGATATACTTTTAGAAAAACTTCCTTTTTTGTCAAGTGTA
ATTAAATACAACAGTTTTAAAAATAGCTACTTAAaggcaaacaaaagaaa
ataaagtttaTCACTAAAGTTCATTATGTAAAACATTAGGTCCCCCCTAG
CTCAGTAGGTGGCCCCTGGCCAAAGACTATTTGTAGGTACCAGTTGCCCT
GAGACCTTTTAACCCCCCCCCTGCGAGCAGGGGGGGGGTGAAGCCATGta
gttttaaaaaatattttcatgtacagtttagcacagtttagtaataaaat
tgtattattttgcagattgatgtgctaaattcgactaggtttaTAAAAAT
GAtcccattttggtaaatttaaacccgtaaaagggcaaaaaatgggtggt
atctatgttaaattgcccaaaataattttagtacatgtgtactaaaataa
cattttcgaaaaataggtgggggtatgtcaaaaattagcgaaaatccttt
tagtactcatgtatgtcttacattttagtactgacccccctgTTTAAAAC
ATGGATCATAAAATTTTGTCCTTTGAAAACAAACGGGTTATAATCAAGGA
GACAAACTTAATTGAAGACGGTATGAAAGGCATAATAATTTCAATAGCCC
ACCACCTTTCAGCACAAcagttttgaattgttttgatcTCAAAGGTTTGT
TAGTATTATATATTTCAACCCTGAAGCTCCAGACTACCTAAGGGGCCTAA
AATGGCACTtataatctgtttttttttgtgatgaAATTGCCCAGATTTGT
TgttcaaaataattcaaataatTAGAATATATCTCAAAATTTTCTGTAGG
AAAGTTTatgaaaaaaacgaaaatttgaaTATTCCAATTTCTAAATCATT
ATGACTGCACGAGTTAACATTTTTGAGATTTCGCATATGAATCATTTCTA
GTTATATGGTTACACGTttgcaaagttaaaaaaaaatcgaatgaatAGTT
TTTGAGATATGACATTTTCGTGACCAAACCCAGGCTAGCAAAATCGACCC
CTAAAAGACCCCCTGTAAAACCTGAAAACCACCGATTTAGCCCGTAAACC
ATCTGGTTTCATAAATACTATTATGTTAAGGCACCAAAAAATCAATATGG
CGTATTTTCTACCAAAAGGTGGCGCGATGCTGAGTCATTGCTTGGTCTAA
TAGACTAGTAGCTGATTTTAGATCTTTAGGCTTGAACTGAGAGAATTAAC
AAACAGGNTGTGGCGCGACGCTGAGTCATTGCTTGGTCTAATAGACTAGT
AGCTGATTTTAGATCTTTAGGCTTGAACTGAGAGAATTAACAAACTGGAG
GCTTATTGTATGCAGTGTTCgaaaaaactcaatttctcGGCCAAAGTTAC
GTAGGGGAATGTCAATGAACTGCGACAGTGACCCGACGACCAGAAAACAG
CCCTTTCGAAATAAGTAAAGACAAGATATTTTTCCATACATAATGTCCTT
ACAAATTATTGCTTTTGATTGGTTTTTTGAAACTCGTAgatcgaaaataa
attttgtctTCTTTTCCCTTTGCAGACGTCACCGTTATTTGTACCGTTTG
AGCACTGATACATGTTGAAAGCTCATCGGAAGTCGAAGGACAAACAAAAT
ACAAACCTTCGTTTGAGGGCAAGTAGTTAACCTCCGCCCAGTCAAGTCAA
GCTACCAGTATTCAAGTGTCCTATCTCCTCTACATCAGATCCACCCTGAC
CACCCGCTAGGTAACCTCCGGAACATACCATCTTGGAAGCGAATCGGATC
CAGGTTCCCTTCAAATCCACCGAAAAATAGCAGCGGACTTCCCTCTCATC
ACTTGGCATTATGTTTTGGTAAGTATTTGATATCAACTTTATCCGGATTA
GATGAATCGAGAAATCATTCTCTTGGCATTGGCTCCCCCCACCCCCTCTC
CGTGACCCNCTCTCATCACTTGGCATTATGTTTTGGTAAGTATTTGATAT
CAACTTTATCCGGATTAGATGAATCGAGAAATCATTCTCTTGGCATTGGC
TCGTCCAACCCTCTCTCTGTGACCCGGTAATTATTCCCGTCCACGCATAC
CTTACTGAATCGACGAGAGTTTCCGGTTAACCCTGTTACAGTgacactga
gacaggggtgtacagaTATCGATAAAATCAGCGTGTTAACGATGAGACAA
GGATAAATAGTGTTGGTTTATATTTGTCTCATCACTAACACGCTGATTTT
ATCGATAtctgtacacccctgtctcaatgaccATTCGAACATTTCCCCTA
TCATTTTTACTTGATGAAAGTTTTTGGACTCCCTTGTCTAAGTGACACGA
TGAGAATTCCAATTCAACCTTGTCTTGCGACCCACTGATTATTTCCATAT
GTCCCTGCTTCGATATCAAATattaaacaaagaaatatcGTTTAAAAAGC
ATAACTAAAAATACACTATGTAAATTTTCAGTATATTTTCACTTTCATCT
TTTATTCCCTTCAGATCTAATCTTTCATTCGAAACTTTAAAGAACGCTAA
TGGTGAAAGTGGAGCTACAAATGGTACTCAAAGACGTGTATATTTTCAAT
GTCTTATCACCAATGACTTACACCGATTTGAGATACAATCATAGNTGTAT
ATTTTCAATGTCTTATCACCAATGACTTGCACCGAATTGAGATACAATCA
GAGacgtttcgaatgttttcgagtaagtttttttgtttaaacCAGTACCG
GTGTTTTTGTAAGGAGGCCAACAAGGTGCTGCATATTTCTTGTACGTTGT
TTGGACAAGCGTTGGGTAGcttttttctgattattttgaaataaagcaTG
GCATGACCTATTTCTTGGTATGCCGAGATAATATTACACTCCTCCTTATA
AATTCTGAGTCTCCTGCATATCCATAACGAATGTGTTAGGGTTGAGATTA
TTCTTACCGTCTCAGGGATCTTAAGATATAATTCAAAAAGATAACTCTTT
GGGCTCAAAAGACAAAGTTGTTCCTTAAACGAGACAGAGATTGATTCACA
GTGCCCTTTTTTATTTCAGACTCATCAATAATGAATTCTAATGGAAAGCC
TTGATCAGAAAGTATTGACGCGTTCACCATACATTGATTTAACATCACAA
TCATATTGACCAAGGCGCACCTGATGCTTTCAACGAATGGAAGTCTTCAT
TCACAACATCCGCTATCGTGCGTTAAAGAAATGTTTGGGGACGTTTCGAA
ACAGAATTTTAGTTGCGTCCAAAGAAATACCAGGTAAATAAAACAGTTAT
agacaccctcttctcacaaactttttcagccagtgggggtaaaattaaTA
GACTGAAACTCGAAGGGGACTGATATTCCTATGTTTTTTATAGAATTTGA
ATTGCATTATTTTCAAGCCATAAAATTTAGTCGGGATGgaaaaaaatagc
ataatattttgcagtgagaatttacttatctgattattttcagcggaaCA
AAAATTAAGAGTACAATTTTGCActagggacgatatttttgccaatCTTT
CCGCAGTGGAGAAGGGAGAACTTATGTGTGTtgcttaagagccattttct
taGGGATATGGACAACGTCAGGAAGAAATTTCCTcagaattgcttcattt
tcaaatattttgttcaaaacCCATGATTGATgcaacctgtcaaaattttg
aatgtttgaaaTTCATATCAGATAGTTGGAATTCGGTTTAggtctttctt
ttttctttttgatagaaTATGGAACTACTATTTGATACTTGGTGAAAATT
TGAGTCCTGAAAACCATTCTGTCGCAACGAATTCAacatattcttttatc
attagctGAGTTTTTGTCACTTATTTTCCGTTTGCATGAGCCCTAAAAAA
TCGACTgttccccaattttcaaatcgcttcagggcgtcttggaataatgg
ccgttcatcaacaaaatttcgaggattccttaaaacaactcttttggaaa
ttgatttttgtaaaaaacaaaatcaaaaacaaggcgttttttagccattt
gaaaaagtcaaaatcaaaattttctactcTTACTACTCTTTATTTCTACA
TTTGGAAGACTAGGGAGCTGGAGTATTTCTTTTTGTGGTATTGTTCTCGA
GAGGGAGATACCACtctgaaaaaaaactaaattcctGTAAAGAGCCATGT
CAACTGAGTAtctaaaaaccttgaaaagtgccaaagtttttgccaaaaaa
ccttgaaaaaccacttaaaaacgaccaaaaaaaccttgaaaaccttgaaa
atcccgaaaaaaaatccgtagacaccctgcTACGACATGTTGGTTTTTGG
ACTTTTATATAGTCTTTCAGTGGATATGTTTTTAGTAGTGAAGAAGTGGG
TTATGATGGCGGCTTAAAAATGACCTTTAGTGTAAAATCTCCATTCTTCC
CCAGTCCATTTCAGCCAAGATCCTCAGTTGTGAGGTGTTTATTAGGTTGT
TTTGGACTCTCCAGACAGACATACCTTTTGACAGTCGAAAAACTACAAAG
ATGTCCATATGGTCTAGCCTCGTTAGACCTGTAGAAGGCTGAGAAAATAG
GCTTTTTAGCTTGCGTAGGATTGCCCTTAGCAATTTTGGTAATCAATCTT
GGTAATCAATCTTGGTAGCAATCTTGGAGATTACAAACCACCGTACGAAA
TTGTACCGATTTTTTGAATGGCCACCCTGATTTGTGTTGTTTACTATGTC
TTTGCTTTTCATGTAACTAAAGTAACGATTTGCTACCAATCATTTACACC
TGTTCCTATTTTATTTTAATCATGGTAGCCGGGATGTTATTCTCAATGGG
ATGAATTTGGTGACATGCAAAATGTTTTTGCAGCTGTTCGCGAAAGACAA
CCTGAACAAGAATACACAGACAGTCAAAGAGAAAAGAAGATTGTCCTTAA
ATATCTCTTTTTCAGCAGGTGAGATGAGGTTTTTGCTTCAATTGATGGGT
ACACTCATCAGAACATTTGAAAATGTTCACcttcttttgataaaaatgtg
CATTATTTGGTCCCAaattgcatttttctaaaatgtacCACAACAAGCTA
ATTAGAGAGGGTGCTTAAAAAATTGACTTGATACGCAACCGTTCCTCAAT
TACATATTTTAAACACTTTGTAGGTTTAGGATTTTGTTAGCTTCgataaa
gattttaaaacacAGAGACGAAGTTAGATCATCCATTAATGACGAAAACA
ATAGCGTCATCCTTCCAGctgcggctttcttatacttttTGGTATCTTTG
TAACCCTTAGATAGATTCTTGAGGTTtgaccaatgaagtaaaagcccgaa
aggctagaagtGAATCTCCTACGTAGGATTTGAAGCTGCTAAACCCTACC
TAAGCTGCGCGGCCTTGAGCATGACCCGGTGTAGCGGATTATTTTAACTC
CCtgtaaatgttgacccccccccccagttaaTATAAACTAGGAAATAATG
ACTCCCCTAGAGTAGAAATTTCCTGGGAAATATTGACTCccttagtaaat
aatgactccccTTAAAAAAGCTGAGGGAGTCAAGATAAACTAGTTTatca
tgaccccccccccaaagtAGTCATTGTTTGTTCACACTACTTTACTATAT
ATATCCATACATAAGGACCCTTTAGCATTCGTATTTGAATATCTTTGCAA
AATATTCTTCCTTCGCCTTTCTAATAGATCTTCCAGGTATCATTTTAAGG
TccttaaagaaaaacttttgtaCGTTCCTTTGTTTTATAGCCGTGTGATC
TGTTTGTTACAGTTTTTACCAAAGttgtctttttatttatacaGTACGTT
CAGGAGAAATTAGTCCTCTGTTTTAAAAGTGCCATAGCCTTcgatagaaa
aattaatttctcaTAAATTTTATACCGTTAGAAAGGAAATCTTCCCATCC
ATTCAAAAGTACAAAGACTTTGCTCAAAAAGATttctaaaacttaaaaat
caagtttttaacTAATAACGATAAATTAACTTGACTTATCAAAAGAAAAC
CGGTTTGAcaacttttaaaagattttagttttagatttttaaaaaatcag
ttAAAAATTTTTACATTGCGATTTTTATACCATTGTAACCCTCGTAAAAT
TCCGCATCGAACCATGTAAAACTTTTCATAATAGCACAATTATTTAAAAC
TCTTTATTTATTAGCACAATACATGAAAAGGTTATAAGCATAATTTCTTA
TGTAAAATGAtagatagacaaaagatttaatTGATGATTACGGAGCCACT
GAACTGTAGCATTGCTTAAATCGATGTTGtgaagctttttttataaaact
tatATTTTTAGAAAGCCTGATAAATGCTCCATCTCACTGTggaagaattt
ttaaaattggcCGAAAATTCGAAAAGCTATACCACTTCAAAGACGGAGGA
CTAATTTTTTTATGGACGTATTGTATATAACTTTCATCACATTGGGAtta
ctgtaaatatttcttctaAAAGATCACTGTGACAAGCGCATTCTCTCGTT
GATTTCTATTGTCCCctgttttttagattttaaaccTCTTGAGAATTGCT
TTAAGATGCTAAATTTTGTTAATTCGTTACTTTTCTCGTTCAAGGCtatg
aaataagaattttttgcagAGCTGATTTTCGTCGTTGACACCCACCCTTT
gccgaaattctttcatttttcaagggACTTTAAGAATTTTCAGAATGTAT
GGTATTCCGCAGAACAGATTTTTCACGTAATTGTCGGTAGACACGAAGTT
TAAACGTTTATTCCTCATTCGGTTTCTCGCCAGTATTTTGTAACANNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNACAAAGAGGGAAGTATACAGTATACAAATTTTGAGCCAAATCTAAAAA
TTCTTGAAGGAAATGCTTCCCTCAGATGGAGTATTTCTCTTACGGGGGTC
TGATTTCCTAGGAAATAGCAACTCTAGGGAGTCTTCATTTACTAGCTTAT
TTTGAGGTGGGGAGTCACTATTTACTAGTTTATTATAACAGGGGAGTCAT
TATTTGGggagttaattttttttgtcacaCCGGCCCGTCGTCAAAGCTAG
CGATGTatatcttaaggcttcacttttccttgcctgggaaaggttaatga
ttcgcttctagccctttgggcttttacttcattggGTGTGACATTTTTGT
GCTCGATATTCAATGTAATCATATTCcgaaattcatatttttctaGGTCA
GGGGAACGCGATGACGGACCAGTCCGAAATATTGCGAAAAATAAAGTAAA
CGAGTCTGGTAGATTGACCGAAAGATTCTAATGGTGAGCTTCGTGTATTG
CTTTagaggattttttttttttttgtgagaTATTATTACCCCTTGATCCA
GAGAAATGGAAAGGAATAGAAAGAGCGCTTCTCGAAAACTATGGAAAtat
tgcccttaagggagtttgtttcgggttaatggatttcttttgttgtcgct
ctAAAAACTTTGTATAATTGGCGTAATGTGactaaattcttttgtttcag
gtcAAATAATGCGAGAACTTTAGGGGCTAATAGTTTGGGACACCTCTTTC
TTACCAAAATACCTATAATTTCTTGCTCAGAATATTCTAGCGATTCTATA
ATGATATAACGGCATCACGACGGCATAATTATAGATAAAAAGATAAAgtg
tgagaaaaaaagaaattaaatctgtttttaatgaatttcttgcAACTTTT
CTCGAAGTAACTTGATATCatcttaatgaaaatttttcagactacGAGTT
AGCgtaaaatttgttactggaTACTGAAAAACTCAAGGGTAATGGAtcag
aaacaaaaaataccGATCCTTTTTTATAAACATAGCCATAAGGAAACCAG
CACTCTTCGCATGACGAGCCGCTTTTTTCTGAACCTTTTCTTATTACCTA
ATTAAAGCCAAAACAAAGAAGATATCAATCAATCAGTTATCAGAACCCTT
TGGAAGCGCTTTTTCTATTCCTTTCCATTTCTCTAGTTGATATTCCACTC
GAGAGATCCAAGCTACCATAGTTGTCAAAGTTTGAATCAAAGATATCCCG
ATACCATTTGTTTACTTCTAAGCCTACTCATTTAGTGTGttcaaagaaca
ttttaaaattgATGTCTTACTGGAATGTTATTCTTATTTGCTGAATGGTC
AAATAGCCATCCatgtttggacattttcttgttgACTTGAACCAAAATAC
TAGCATGTGCTAAACCTTCGCAGAAAAAACAGTACCGTTCGTTACGGTAA
GATTTAGCGGTTACCTGAAAACCTTGGTCATTCCCTTTTTATTCGATGCT
GTCGCGACCTTTTTAGCGGCAACGGATCCTTAAATCTAATTAGATGTATG
CACTTTACCCAATTTCTATGACATCATTCTTGCTTTTCCAGTCAGACGAA
ACGAACTAAAAGCGTCGCAGCGTCCTCTGCCAATCATCTGTTTTATATTT
TGAGTAAATAAATATCTACGCTCATGGTATCATACATGAAGTTTAGAGCT
CGATGGTTACATACGGCTGACGGTATTTATCAGGTAAATAACTTTGTGAT
CATATTAGATTTCAACAATAACCTACTAACGCGTGGTTACTGGAGAGTGA
TCAAATTGAAAGCCCGACGTTGTCCCCAAGAACCAGTGTAGACTTGAAAG
CCCATTCGGCAGCGCAGTTGAACTACTGTGAggttgatgatgatgaatag
TAATCAATAATGAATTATGCAAAGGAGGTTGGGACTGAGCCAATACGATG
TTGATGAACTGAAAAATGAATAGACATCAATAGAGTGGGGCTCAGGCCCT
CGAGCTCAGACCTCTGAATAGGGCGAGAGGTTATGAGtgagaaaaggaaa
gaaatcagGGACTTGAAAAGGAGAACTTGAAGGAGAAGGACTTGANAAGG
AAAGAAATCAGAGACTTGAAAAGGAGAACTTGAAGGAgaatagactagta
aaccacgtcgttgtatttcgctgcagattaaactttcaatgggatctatt
ttttttatatgttcactgaatacaacgACTAGTTCCAAAAGGTGCTATTT
ATTAAATAAACGGTGGAGTGCTTTTTCTACCGCGGCGGAGTGCTCACTAA
AAACAGCGCACTCACTCTCACGGAttagaataaaaaagtaaacaaaactc
ggtactttttatgctttattatttttttttatgagactttCTCTTGAAAA
ACTAATTGCTGAACTAAATTAACAGCGTTCATGAAGCCCCTAAAAGGcct
aaaatagtttttttgaaaacttgttttttattttgttaaatgaGAGGTGT
TTTATTTATCATCTTATGTGCAACATTTGGATATACAATTTAATtcactc
aaatcaaaacaaactcacatcctgattattttttgactttaatgtattat
aaaagaaggtgagtaCAATGGAATATCAGTCAATTtagaagcttttttat
tttgaaaaaattgaaagtactTGAAAGTTCTTTCTTCCATAATTCATGCA
TAAATGCACCAACAAGATACCAACGACAAGACAAGGAGTTAAATAAAACT
AttcacaaaaagtatgatttgtTTGTCTGAATGAAAAGAATATAAACTGA
ACTGTAACTGCCAGCTAGGTAacccaaaacaaaaatatttaatataaggg
gaaaatctttttcaaaagaaaaagataaacatCTTTTAGAAAAACgacat
caaaaatataaaatatcaggCCACTGCAGgcataagaaaacttttttttt
gtggaagctaaaaagaaaaatactttcaaaaaagcaacagcttttacaaa
atataaaattatatGTATTTGTTCATATTGACCTCCAATTTTGCTATAGA
AATTATATATAGTATATACCTACAACATAAAATTACTTCCAAAtccaagt
agatttttttttaaattggcaaaaatccaatcaaaattttcataaatttt
ataagTATATAAACAGTaagttttgaaagactttaaCAGTCAGTAACAGT
AGGTATAAATTTCAGTCTGAACTTGTTCAACAACACCAGGGGACTACAAA
AAATTACAAGGTAGAAGtctgcccgggggggggcactatgACCTTGAtga
ccgacggggacgtgccgcgctgtagtttgaaaagtggaccctgtgagata
tgaatgtttggtaaatttgggaccttTCAGAAAGATGAATGATTCGGTCC
AAGAAAATTTGtgaagtggcaaaaatgacttaaaagtagaagaaaaattc
aaatattttctaatttccaccctaaAAATTGTCTGAAACGACCAAAAATC
GACCCAGTCAGGTCTactatcttgaaaattagtacaaATTTGGGACCCTA
TCAGATTCTGAAAAAGGGAACCTGATCAGTAGCATGTCCTCATActtaat
tttgcctaagtgccccctgGAAGTCTGCCAGTAGTGAAAACCCAAAACAT
CCTCGTACATCTAACATTTAGCGTCAAGGGGAAATCCAGTTAAACGACGG
GCATCAGAAAACCCAGAAAACCAGTAATCTCAATGtaaaatgttgttatt
ttcattcACAAATAGAACCAAGATGTGTCTACAGTGGTCAGCTTGTCAGA
ATATTGTTTACATAAAAAagcattcaatttttaaattcgaaattaccact
ttcacttttcatcatttccacACCAAATATTGCACCACCAAAAATGTTGT
ATAAATACTATACTTTCCATCTTAATTTTTGAGGATTTCTGTAGCCATTT
CGGAGTTACATTCTCTATGGGATAAGGTTATCAAGTTCAACTTGTGCTGT
AGAAAAAAGCATTGATCTGTTACCCAATGAATGTGAGCATATTAACATGA
ACATTCCCTGCAAAAAGTTTATCCTGCATGCAGTCATATAGTCATGGAAT
CTGTGTTCAGTTGTGTCATAGTGTCATAATAAATATCTGTAGATATTGCA
CTTGTATATACTATAGATTTACCAACGTAccaagccaacaaaatttcaaa
gatccCAGTGTTAAAAGATGTCATGAATGTTTATAACCATACataatcaa
aaaatctttcaatcacAACAATcacatgaaaaagtgaaagtataATCCAT
ATTTTatgagtttgtttgttttttgaatatatcAACGTCCCAACCAAGCC
AAAAACAATGAATGAATAAAGTACCTCAGATAGAGAATACCAAGACAGTT
TAAATCTGTGTTTATAAacattaaagcattaaaaatctTCTCTTCTCAGT
TTAGCAAAGAAGTTGGAGAAGTCCTCGCCACGTTTTTCTGTTagtgttta
aattttttttctcatccaTAACTCCGAGAAACTCAAATATTGCGATgaga
atagaagaaaaaataagccgTGTCCATTCATTTTATCTTCCCTCTTTTTC
GAGGGAACGTTGCCTGAGATTAGATTGAAGCAAAATCCCGTATTGCACCG
TTTGGAACTAGTCTGTCTTTCCAATCCACTTTCCCGCAGCAattcctatt
ttttataagaactctttattatataaGCACTATTCCTGCGTTCCTGTGTc
taaggaaagacagacgcttgctagtctagaAGGAGAAGGACTTGAACAGA
GACTATCGTTAATTACATGCCAGAGTTACTAATTTATTTGATGTTATTTA
TGTTACGcttatttgatatttattgcTTAATTGGAGAAACAGAATTGATG
TTGATTGAAATCTATTAGCGTACCTTAACTACGTGTCCATAGACTTAGCC
CCAATAAGGATATCCTGATCGAAGGAACAGATAAGTGATCTGCGAGGTCC
CCTCAATAACTAAAGGGTGACCCCAATCGCCTAACTTCCCTTCGTCACAC
TACTAATGCGAAAGTCGTGAAATTCCACCCTTTTTGTCAAACATCTAAAT
GCGAGATTAAGTTTCAAGGTAACTTCATTTCTCTTCTTTAAAAGgatgta
tttttgaaaatggcaaaaaaatattgaagaataAAATGAAGACTTCCTTA
AAATACCTGAAGgctgaaaagtttttattttaaatcacctaatctttctt
ttgatacagAGTGATTCAAAATCGATAAGCGGCATATAACCCAAAGCAAT
CGTCAAGCTGTAATGTGGGATGTTCTTCCTCGATCTTGGAATAATCTCTA
ACAGGTTAGATTGGGTTTTATTTGTCTATGGAGCTGCGATTATCCAGTCT
CTTGCCCTCTATCTGTTTTTATATGTTCACTTTAGTACATCTAATAGTAT
GATGCTAATGATGTTGGAAGTAAAGAGAAAACAAgcaataccgggtgcgc
cacaaaaaagtttctctctttgaatcTGACTTTTTCGAAATCTAAGAATT
AAGAAACAACAATCCCTATTCcatcagaaagaagaaagataaacttaaat
tttgatggttcatttattaaattcgattcattggatcaaaagttatgctc
aattgaataaaaaagttactttcagaaagtgcccgaaaacgttaaaaatc
gacctattaaatttttattttaaaattggcaatcgcaagaggctttacat
gattaagaccattttttcagtgattaaacacataaattttgaaactgatt
gaacgaaagggtttaaattgttcattaaaatcattcCAATTTACTTTAAC
GAAATCTTCCAcatatttttggttctagactagataaagtctatgtaagg
ctggatgtacctcgaaacccatatttgatgtatttttttaaattttacca
gattttttggcttttttcaacgaatcttctgccttttattgaaattcaat
cttcctttaaataacaaaaggtcatttagacagctaattatcatttttaa
tgactgaaacgaaagtactgatgcatcatgttattatgcttctgtttaat
ttgataggtcgatttttaacgtttttgagtaccttcagaaagtaactttt
ttattcaatatagTATAACTtccgatctaatgaaccgaattcaataaatg
acccatcaaaagtTAAGTTTATATATCTTCTTTCCAAttgaataggaatg
gttcttttaaaaattttagatttcgggaaaattagttttaaagagagaaa
cttttttgtggcgcacccggtataattaTAGTCGAAAGCTTTAACAATAA
CCTTAATCAAACGGTCATTACGAAATCCTGTAATTCTCGTTTTATTGAAT
TCTAAAGCCATGATGTTTGTTCAATTACCACTCTCGAATTTCTCAATGTG
AATGATAGTAGAATTGAATCTTCCCTTCAACAAGTCCCACATTGATTTGG
TAAATTGTTCATTCGAGTTTTGTAAGAGGACgttcaaattttaatattct
CTCTATATTTTATTCCAGGATACGAATTTGTGGCATGGAGCATCCCCAAT
ATTTTGGCTTCAACAACCTGAATTTGATTGGTGGATGAGAAAAGCTATAA
TAATGGAATTGTTTTGACATAGCTGATGCAGTTACTTGCTTGGTGATTGT
TGCGAACCATTGATGTATTTATAAGAGTATTCAATGCAATCGTTGAGATA
TGGTATGATATGCTGATGGATGGATTATCTAGAAGTGATTTCTTTGGTTG
AATATAGCAGTGTATTCATTGATTTGAAAGATGGCCTCTTTTTTAGCCCA
GTCATCAACCGTGGCCAATGTTGCTTGACCTGTGTTTCAAATCAGATCGT
TCATTTCTTGGAATGAAAAATCGTCATTTGAAGAGCGATTGTTAAATGAA
ATTGTCTCGATATCAATTCTGTAATATTGGTTACCAAATCTCTAGTTCTT
TTTGCCTATTGATTAAACTACTTTGGGTTAACTTATTAGAGTTCGAAATG
AATAGTTTACCTTTTCCTTCTAATCAATGATTTGTGTAGAATTTAAACAC
CCAAACAAGCCTACATTCAACTCACTAGGATTTTGTTGTGGTTTCAGTTT
GTCCCAAGCTTTCAAACCTTATTTGTGTGAAAGGAGACATATTTTCAAAG
AGTTTACTTTAATCATTTATCACAAATAGTGTTTTTACCAGTGTAAATAA
TTATTTGTGGCCTGAAAGGGACTTTTCTTTTGGACTTTTCACTGCNGCAA
ATAGTGTTTTAACCAGTGTAAATAATTATTTGTGGCCTGAAAGGGACTTT
TCTTAAAATCGAACTTCTTTTTGGACACTGCCAGGAAATTCGAGTTTCAT
TTTGTGATAGTATAACTAAATTCTAGATGAAGTTTTTCTTTGTCAGGATT
GATTTTTATCAGCGTCTTACAACACTAAAGAGCATTTTAgtaaggctgga
cttaaaaaattgttggtttgccgtcacccgaccgaccctaccttAAAACC
TGCCtacccaaaaaaatttattgccattttaaagaagaattttttttttt
cttcaaaaacttcaaacaatcaaatcaaaactctTATCTTGtctgtctca
agcataagaatcgtgaATT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_015569XLOC_015569Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00027598-exon-sc0000636-1491911889:76832..76870TCONS_00027598-exon-sc0000636-1491911889:76832..76870Clytia hemisphaericaexon
TCONS_00027598-exon-sc0000636-1510915933:76832..76870TCONS_00027598-exon-sc0000636-1510915933:76832..76870Clytia hemisphaericaexon
TCONS_00027598-exon-sc0000636-1575043694:76832..76870TCONS_00027598-exon-sc0000636-1575043694:76832..76870Clytia hemisphaericaexon
TCONS_00027598-exon-sc0000636-1491911889:89007..89299TCONS_00027598-exon-sc0000636-1491911889:89007..89299Clytia hemisphaericaexon
TCONS_00027598-exon-sc0000636-1510915933:89007..89299TCONS_00027598-exon-sc0000636-1510915933:89007..89299Clytia hemisphaericaexon
TCONS_00027598-exon-sc0000636-1575043694:89007..89299TCONS_00027598-exon-sc0000636-1575043694:89007..89299Clytia hemisphaericaexon
TCONS_00027598-exon-sc0000636-1491911889:89946..90153TCONS_00027598-exon-sc0000636-1491911889:89946..90153Clytia hemisphaericaexon
TCONS_00027598-exon-sc0000636-1510915933:89946..90153TCONS_00027598-exon-sc0000636-1510915933:89946..90153Clytia hemisphaericaexon
TCONS_00027598-exon-sc0000636-1575043694:89946..90153TCONS_00027598-exon-sc0000636-1575043694:89946..90153Clytia hemisphaericaexon
TCONS_00027598-exon-sc0000636-1491911889:90501..90714TCONS_00027598-exon-sc0000636-1491911889:90501..90714Clytia hemisphaericaexon
TCONS_00027598-exon-sc0000636-1510915933:90501..90714TCONS_00027598-exon-sc0000636-1510915933:90501..90714Clytia hemisphaericaexon
TCONS_00027598-exon-sc0000636-1575043694:90501..90714TCONS_00027598-exon-sc0000636-1575043694:90501..90714Clytia hemisphaericaexon
TCONS_00027598-exon-sc0000636-1491911889:92260..92399TCONS_00027598-exon-sc0000636-1491911889:92260..92399Clytia hemisphaericaexon
TCONS_00027598-exon-sc0000636-1510915933:92260..92399TCONS_00027598-exon-sc0000636-1510915933:92260..92399Clytia hemisphaericaexon
TCONS_00027598-exon-sc0000636-1575043694:92260..92399TCONS_00027598-exon-sc0000636-1575043694:92260..92399Clytia hemisphaericaexon
TCONS_00027598-exon-sc0000636-1491911889:94828..94914TCONS_00027598-exon-sc0000636-1491911889:94828..94914Clytia hemisphaericaexon
TCONS_00027598-exon-sc0000636-1510915933:94828..94914TCONS_00027598-exon-sc0000636-1510915933:94828..94914Clytia hemisphaericaexon
TCONS_00027598-exon-sc0000636-1575043694:94828..94914TCONS_00027598-exon-sc0000636-1575043694:94828..94914Clytia hemisphaericaexon
TCONS_00027598-exon-sc0000636-1491911889:96023..96164TCONS_00027598-exon-sc0000636-1491911889:96023..96164Clytia hemisphaericaexon
TCONS_00027598-exon-sc0000636-1510915933:96023..96164TCONS_00027598-exon-sc0000636-1510915933:96023..96164Clytia hemisphaericaexon
TCONS_00027598-exon-sc0000636-1575043694:96023..96164TCONS_00027598-exon-sc0000636-1575043694:96023..96164Clytia hemisphaericaexon
TCONS_00027598-exon-sc0000636-1491911889:99691..99785TCONS_00027598-exon-sc0000636-1491911889:99691..99785Clytia hemisphaericaexon
TCONS_00027598-exon-sc0000636-1510915933:99691..99785TCONS_00027598-exon-sc0000636-1510915933:99691..99785Clytia hemisphaericaexon
TCONS_00027598-exon-sc0000636-1575043694:99691..99785TCONS_00027598-exon-sc0000636-1575043694:99691..99785Clytia hemisphaericaexon
TCONS_00027598-exon-sc0000636-1491911889:101000..102100TCONS_00027598-exon-sc0000636-1491911889:101000..102100Clytia hemisphaericaexon
TCONS_00027598-exon-sc0000636-1510915933:101000..102100TCONS_00027598-exon-sc0000636-1510915933:101000..102100Clytia hemisphaericaexon
TCONS_00027598-exon-sc0000636-1575043694:101000..102100TCONS_00027598-exon-sc0000636-1575043694:101000..102100Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000636supercontigsc0000636:76832..102100 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
3.92026	1.17466	1.22718	0.907416	2.14257	4.0143	5.77843	4.23301	3.58494	0.849429	5.93058	3.63801	5.6611	5.01226	2.60062	3.10327	2.58402	3.2043	0.000679161	2.37751	1.86208	1.36568	3.32605	2.20638	3.05836	3.44525	1.56778	1.75523	0.210255	2.84775
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00027598 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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