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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00027586 ID=TCONS_00027586|Name=TCONS_00027586|organism=Clytia hemisphaerica|type=transcript|length=1218bp
CCCGtatgtgtgctatttcaggccttaaaatagtttctttttattttcaa
attccagcaaaatataattttcttaTTCTAAGTTTCAAAGGGTGGATAGA
CCACCACACAGGAAAAATGTAGACAAAACCTCGTGTAAAGAATGTTTGTT
ATCTTAGAAATTACAATGCCATAGTTAATATAAACAATAAAAAAAATGCA
ATAAAAAAGAGCACAATGTAGgtatacaaaaattaaaatatagaCTTAGA
TTATAATTTCAGATTATTTtaataaggcgaaaataaaagtttttccggaa
accggccgggtgaaaataaaaatttttctgacccggccgcagactatggg
ttcatctatatggtttatcataaagaaaatcaagttgaccgttcaagctt
tcaaacgtcgtttggttagatattcccgcttgtaaatcaagtttttttca
actctttgtacataaaagttatctttaaagttctatttcaatgatcttaa
gttatcaaaaatagcgaaaaaaaattttccggccggccgcatgagagctt
ttttccttcacccgcattcaggaaacactacatttttttatttttgcctt
attATACACTTTTAATAAGCCTCGGACAAAATTATGAGTCTCATTTTGCT
TACAAAACCTCTCCTtctcaaaatttataattttacttGCTTTAGAATTT
CTAATATTCATCAAAAAGCAATTGCATATAATAAAACTGATTCCTATatc
ttaatcaacaaaaattaATTAGACAGAAGTCAGttaatcaaaaattattt
gGTGATCCAAACCGAGTCGCCAACTTTGCCAGTGTTAAGTTTCACGAATT
CGAACCAAAGATGAGTGGAATTTGTTACCGAGAACCGACCGTAACCAAAA
TCAGCGTCACGCACCTTAGACCATTCCTTTGTGAACCATTTATTGATCTC
CAAGTTCACACCTCCTGTACCGACCACCAAATGAGTTATCCCGTCCTCCC
GGCATTCGTTGCGATATANCCTCCTGTACCGACCACCAAATGAGTTATCC
CGTCCTCCCGGCATTCGTTGCGATATACTTTACACGTTCGTTCGTAAATG
TGATAGTGAGCCCAAAGACCGACATCCACTTGGTATTTGTATAACAAATC
TTCCAGATATTGTTGTTGACCAAGTATGGTAGTCCAATCTGGtcctacaa
aagaaaaaacactttaGC Run BLAST on NCBI transcript from alignment at sc0000635:4845..6062 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00027586 ID=TCONS_00027586|Name=TCONS_00027586|organism=Clytia hemisphaerica|type=transcript|length=1218bp|location=Sequence derived from alignment at sc0000635:4845..6062 (Clytia hemisphaerica)
GCtaaagtgttttttcttttgtaggaCCAGATTGGACTACCATACTTGGT
CAACAACAATATCTGGAAGATTTGTTATACAAATACCAAGTGGATGTCGG
TCTTTGGGCTCACTATCACATTTACGAACGAACGTGTAAAGTATATCGCA
ACGAATGCCGGGAGGACGGGATAACTCATTTGGTGGTCGGTACAGGAGGN
TATATCGCAACGAATGCCGGGAGGACGGGATAACTCATTTGGTGGTCGGT
ACAGGAGGTGTGAACTTGGAGATCAATAAATGGTTCACAAAGGAATGGTC
TAAGGTGCGTGACGCTGATTTTGGTTACGGTCGGTTCTCGGTAACAAATT
CCACTCATCTTTGGTTCGAATTCGTGAAACTTAACACTGGCAAAGTTGGC
GACTCGGTTTGGATCACcaaataatttttgattaaCTGACTTCTGTCTAA
TtaatttttgttgattaagatATAGGAATCAGTTTTATTATATGCAATTG
CTTTTTGATGAATATTAGAAATTCTAAAGCaagtaaaattataaattttg
agaAGGAGAGGTTTTGTAAGCAAAATGAGACTCATAATTTTGTCCGAGGC
TTATTAAAAGTGTATaataaggcaaaaataaaaaaatgtagtgtttcctg
aatgcgggtgaaggaaaaaagctctcatgcggccggccggaaaatttttt
ttcgctatttttgataacttaagatcattgaaatagaactttaaagataa
cttttatgtacaaagagttgaaaaaaacttgatttacaagcgggaatatc
taaccaaacgacgtttgaaagcttgaacggtcaacttgattttctttatg
ataaaccatatagatgaacccatagtctgcggccgggtcagaaaaatttt
tattttcacccggccggtttccggaaaaacttttattttcgccttattaA
AATAATCTGAAATTATAATCTAAGtctatattttaatttttgtatacCTA
CATTGTGCTCTTTTTTATTGCATTTTTTTTATTGTTTATATTAACTATGG
CATTGTAATTTCTAAGATAACAAACATTCTTTACACGAGGTTTTGTCTAC
ATTTTTCCTGTGTGGTGGTCTATCCACCCTTTGAAACTTAGAAtaagaaa
attatattttgctggaatttgaaaataaaaagaaactattttaaggcctg
aaatagcacacataCGGG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00027586-exon-sc0000635-1491911889:4845..6062 | TCONS_00027586-exon-sc0000635-1491911889:4845..6062 | Clytia hemisphaerica | exon |
| TCONS_00027586-exon-sc0000635-1510915933:4845..6062 | TCONS_00027586-exon-sc0000635-1510915933:4845..6062 | Clytia hemisphaerica | exon |
| TCONS_00027586-exon-sc0000635-1575043694:4845..6062 | TCONS_00027586-exon-sc0000635-1575043694:4845..6062 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000635 | supercontig | sc0000635:4845..6062 . |
Blast
The following BLAST results are available for this feature:
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