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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00027585 ID=TCONS_00027585|Name=TCONS_00027585|organism=Clytia hemisphaerica|type=transcript|length=195bp
GCTAAATCTTTTTCAGTGAAATAAcaatttaaattcaaaagatGGCATCA
GCATTTTTCAGACGCCTTGGAAGCAAAGATTTCTGGTGGAATTACATTTG
CAGTACTTTGCAAACTGGGGCATTCCCttagctgcaatagctgatatGAA
AAAAGACCCAGAAATGATCAGTCCACGGATGACCACAGGTATGTT Run BLAST on NCBI transcript from alignment at sc0000635:186237..187573- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00027585 ID=TCONS_00027585|Name=TCONS_00027585|organism=Clytia hemisphaerica|type=transcript|length=1337bp|location=Sequence derived from alignment at sc0000635:186237..187573- (Clytia hemisphaerica)
GCTAAATCTTTTTCAGTGAAATAACAATTTAAATTCAAAAGATGGCATCA
GCATTTTTCAGACGCCTTGGAAGCAAAGATTTCTGGTGGAATTACATTTG
CAGTACTGTAAGTATCCAAAAGTTATTGGAAAATCATATATACTAGCAAA
GTATATTTGCAAACAAACCAAAACATTCTTATCAACCACTTTTGATATCC
TCCCACCTAAAAAATCTCCGATTTCTTTTAAAATCTTAACAAAATATGTT
TTCTTTTTTTTCAGCATTTTTGGGGACCAGGTAGGTGATATCTTATATCT
TTTTTATCAAAACATTATTGTTTTATAAAATATCCCATCATGGACCATCA
CTTCAGGATTGCTCCCAAAGGGATAGAGAATGGTGTGATATTTCGGGAAA
TTTGCGATCGTTATCCTAATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNATAAAATATCACATCATCCAGTATCCAACCAG
GATTACTCCGGGTAGGATAAAGTTGGTGTGATATTTCTGGACATTTGCGG
TCGTTATCCTAAAACAGCTGTGTAATTTGTAAAATATCAGTGGATGAAAT
TGATAGACCCCTCAAAATGTTTGAAATTATGTATCTTATAATTACTTTGA
AATTATCAATATAAAGAGGCCTCTTCTATTTAAAAGAAGAGCTCCTGAGT
GCAATGAAACTTTTTATTTGATTACATGTTTTTTTTTATAAGCATAACGC
TTATAAGCATATAATGGCTCAGATTTGTAGACTTCCTAAGCATAACATAA
GCATATGTGTCAGCCTGAAATATTTTTTAAGTTGTCATTTTTTATCAGTT
TAAAATGGTTTGTTTGAGGTCAAGTAAAATAAAGACATTCCACGGCTACC
ACTACTCCCAAATCTGAACAAATTTAAACAAATTTTTACAAAATTTCTAA
AATTTCACTAAAACTTGCCTTGGGGTGAATTATCAGCATGGTTCATAAGC
ATATGATAAGCATAATCTATGCCTGGATGCTTTGAGCAACTAATGCATAC
ACGAGCCTGACCAAGGGGCATACACTTTGCTTATAAAAGAAAATATGTAT
TGTTTTAAAAAGGATTATTATTTTGCTGTTTATTGAATGATTGTGAATTT
ATGGAATATTTTAATTATTAAAATTGTTATTTGTCACTTTTTTGTCTAGT
TGCAAACTGGGGCATTCCCTTAGCTGCAATAGCTGATATGAAAAAAGACC
CAGAAATGATCAGTCCACGGATGACCACAGGTATGTT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00027585-exon-sc0000635-1575043694:187467..187573 | TCONS_00027585-exon-sc0000635-1575043694:187467..187573 | Clytia hemisphaerica | exon |
| TCONS_00027585-exon-sc0000635-1575043694:186237..186324 | TCONS_00027585-exon-sc0000635-1575043694:186237..186324 | Clytia hemisphaerica | exon |
| TCONS_00027585-exon-sc0000635-1510915933:187467..187573 | TCONS_00027585-exon-sc0000635-1510915933:187467..187573 | Clytia hemisphaerica | exon |
| TCONS_00027585-exon-sc0000635-1510915933:186237..186324 | TCONS_00027585-exon-sc0000635-1510915933:186237..186324 | Clytia hemisphaerica | exon |
| TCONS_00027585-exon-sc0000635-1491911889:187467..187573 | TCONS_00027585-exon-sc0000635-1491911889:187467..187573 | Clytia hemisphaerica | exon |
| TCONS_00027585-exon-sc0000635-1491911889:186237..186324 | TCONS_00027585-exon-sc0000635-1491911889:186237..186324 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000635 | supercontig | sc0000635:186237..187573 - |
Blast
The following BLAST results are available for this feature:
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