TCONS_00027554 (transcript) - C. hemisphaerica

Overview
NameTCONS_00027554
Unique NameTCONS_00027554
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1533

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00027554 ID=TCONS_00027554|Name=TCONS_00027554|organism=Clytia hemisphaerica|type=transcript|length=1533bp
TTAGCTCTTGAGATggtaattcaaaaagaaatttcatttgtattcaaaat
attgtttgtAGTTGGTGGTTCTGGGGGTGCTTTGCATTTTGGATACAACG
AATCAAATTCCTCCAGAAGTTTAAACTCATCATATTGTTTGGTGCTGACA
TCACCACTAATTTGAACATCCATCACATACAGTCAATCTATGACTTGTTT
TTCCTCAGCACAGTTGCATATTGGACATCTTGGatccatttttcttttca
gttttgtGGTTACCGCGTTTTAGACAGaaaaaaaaaacaggaatgACAGg
aatgaaaaaattcaaaggggCAGCTTTGAACTTGAATACTGTTCAGGAAG
ATCTTGTGGCTGGACCACCATATCCTGACGGCAAAGGTAAAGATGGATTG
GATTTGAAACTTGGTGATTTGAATTTGGAAGATGTTAACGAGGATCAGAA
ATCAAGGCTAGAAGAATTTTTAAGAGACAAACAGAAAATTGGGTCAGAAA
TTAAAGATGGAGACTTTGAAAGAATGGAAGAACTTGGTGCAGGGAATGGC
GGCGTTGTTATGAAAATGAAACATATACCAACTAATCTTATAATGGCTAG
GAAGTTGATACGACTGGAAATCAAACCAGCCATTAGAAATCAAATTATGA
GAGAGCTGAAAGTATTACATGAATGTAATTCACCCTACATAGTTGGTTTT
TACGGTGCATTCCAAAATGATGGAGAAATATCACTTTGTATGGAATATAT
GGATGGTGGTTCTCTAGATGTTGTCGTAAAGAAAGCTGAAAGAATACCTG
AAAAGATTTTAGGCGTTGTCACTTATTGTgTGCTGAAAGGGCTAGCCTAC
CTACGTGAAAAACACTCCATTATACACAGAGACGTGAAACCATCGAACAT
ATTGGTAAACACGAGAGGTGAAATCAAATTGTGTGATTTTGGTGTTAGTG
GTCAACTAATCGATTCAATGGCAAACTCGTTTGTTGGTACTCGTTCATAC
ATGTCGCCTGAACGATTACAGGGAACAAAATATTCCGTCCGCTCAGATTT
ATGGAGCCTGGGACTCAGTCTAGTGGAATTAGCCATCGGCCGTTACCCAA
TTCCATGCATGACTTCAGATGATATTACAAAAATACTGCGTGGTGACGCC
AAAGGGGGCGTTGTGGTCCCACCCGGTGCGGCCGCCCCAGCTGGCGTGGA
AATAAAGGCGATGGCAATCTTTGAGCTTTTAGATTATATTGTAAATGAGG
AACCACCCACACTACCGAAATCCTATTTCTCAAACGAATTTTGCGACTTT
ATTAACTTATGCTTAAAGAAGAATCCGAATGATCGAGCCGACTTGAAAGA
TTtaatgGAACATCAATGGGTTAAAGGAGCTGAAGAACAGATAGATGAAA
TAGATTTCGCCGGATGGGTCCAACGCCTCGATGACCCTGGACGACCTACC
AATGTGTAACAAGCTTTCACCAACAATTATATTTGCTGAGTAATCAACAA
TCGAACAAAATGGTATAAAGTCTTCATGTGTAG
Run BLAST on NCBI

transcript from alignment at sc0000632:137271..147307-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00027554 ID=TCONS_00027554|Name=TCONS_00027554|organism=Clytia hemisphaerica|type=transcript|length=10037bp|location=Sequence derived from alignment at sc0000632:137271..147307- (Clytia hemisphaerica)
TTAGCTCTTGAGATGGTAATTCAAAAAGAAATTTCATTTGTATTCAAAAT
ATTGTTTGTAGTTGGTGGTTCTGGGGGTGCTTTGCATTTTGGATACAACG
AATCAAATTCCTCCAGAAGTTTAAACTCATCATATTGTTTGGTGCTGACA
TCACCACTAATTTGAACATCCATCACATACAGTCAATCTATGACTTGTTT
TTCCTCAGCACAGTTGCATATTGGACATCTTGGATCCATTTTTCTTTTCA
GTTTTGTGGTTACCGCGTTTTAGACAGGTTTCCATTTATTTTTCATTTTT
TCATTTCCCTTATACCTTGAGGAATGAATGGTGTTTTCATAATTGAAGAT
TTTTGAATTTTTCCCTTCAGCATTGTTATAAGCCTGAATTTAAAAAAAAT
GTTGGTTGGTTTGCCAACTGACCCTACCTCCAAACCTTCAAAATTTTCCT
TTTTAATTTTTTAAGAAAAAAAAAACAGGAATGACAGGAATGAAAAAATT
CAAAGGGGCAGCTTTGAACTTGAATACTGTTCAGGAAGATCTTGTGGCTG
GACCACCATAGTAAGTGAATTATCTCCTTTTTAGCATTTATACATTTATT
TACATAAACCTTAAAAATTCTAAGAAATTCTTGACCATAAAAAAGCTTAA
GATATACCTTTCAATCNACATAAACCTTAAAAATTCTAAGAAATTATTGA
CCATAAAAAAGCTTGATATATACCTTTCGATATTGTTTTTTAGTCCTGAC
GGCAAAGGTAAAGATGGATTGGATTTGAAACTTGGTGATTTGAATTTGGA
AGATGTTAACGAGGATCAGAAATCAAGGCTAGAAGAATTTTTAAGAGACA
AACAGAAAATTGGGTCAGAAATTAAAGATGGAGACTTTGAAAGAATGGAA
GAACTTGGTGCAGGGAATGGCGGCGTTGTTATGAAAATGAAACATATACC
AACTAATCTTATAATGGCTAGGAAGGTTTGACTTTTTCTATTTTACAAAA
ATGTATTTTTTGCCAAATTTTTACTTTCGAGAATTAGTGAAAATTCTATT
CTATGGACCAATTTTAGCAGGTGACATTGTAAACCAGTGTGAGACAAGTG
CTGGAACTGTTCAGTTTTGAAAATGAAATCCCTCCAGTTGAGATTTCTAA
CTAGAATTCTCATTGTAGTAATAAGCATTAGAGGAACAATGATATTGCCT
CTTTTCTAATTTTGTATGTTCTCCCAGATTGACCACAATAGTTGACACCT
TAATACAAAAGTAAAAAACAAAAAATTAGCTTCTGAAAAAAAATTAGCTG
CTGAAAAAAAATTTATCCCAATTTTTAAAAGGGGAGTCTAATCTAATCAT
TTTTCTTATTTTTGCTTCAATGTCTTCAGTTGATACGACTGGAAATCAAA
CCAGCCATTAGAAATCAAATTATGAGAGAGCTGAAAGTATTACATGAATG
TAATTCACCCTACATAGTTGGTTTTTACGGTGCATTCCAAAATGATGGAG
AAATATCACTTTGTATGGAATATATGGTTTGTAAAATCTCTAAATGTTTT
TATTGTTCAATACCAATAATGTGCTCGTTTTCCATGTTAGAATAACAGGA
GGGTGTATCACTTTGTATAAAAAGGAAGAAAAGAACCTTCCTTTACTTGC
AAATAAATGATGTATCATTTTTCATAACTTACTGTTTTGCTTGACAGAAG
GGTGTGTACTGATCTTCGTATAATTAAATAATAAGAACAGCATGGTGTTC
TGTTTGTTTTTTACTCATTTCTTCAATTAATTTTTTCCAGGATGGTGGTT
CTCTAGATGTTGTCGTAAAGAAAGCTGAAAGAATACCTGAAAAGATTTTA
GGCGTTGTCACTTATTGTGTAAGTACATGTATAATCTTCCAATCACCTCC
AAGCTTCAGACAAAAAGACTAATCGATGCTAAATTCGACAATTATTTCTT
GAGTTCTTTCAGGAAAGGCAATATTTGAAGTTTCACTTCAAATTAATTTC
CCTATGCCACCAATGGGAAAAAGGATCTAAAATAAAATAATTTTTTTGCC
AACCATAATTGGATAGGAAGTAAATTAGACTTCTGACTCGCATACCATTT
AACAACTCACGTATACTGAGCAACATAAGAGTTGCCTGTTAGAATACCTT
ATTTTGTTTTTTTAACAGGTATTGATTTTTCAGTACACGTTTTTTGGACC
TACCCCGGTGGGGTGGAGGTCCTATAAATTAACCCGTGTTCGTTAGTTAG
TTAGTTAGTTAGTTAGTTAGTTAGTTAGTNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTCCAATAGA
TATATAAATCGAAATTTAAAATTATACATTACTTCCATTAAATTCTAATT
ATTCGTTTTATAAATAGGTAGGTCCATTAAAGTATTACTTGTTTTTAAGA
AACTAGTTTTACCAAGCAGCCTCGATGTTTCTTACATGTTTCTAAACTTT
TTGACATAATCGGCCTATTTTTCATGCAAAGAAAAAAAAACATTTGTTTT
GATTGGAAGGTTCTTTAAAAAAACAAATTAAAAAATGTTATTTTTTCATT
CTCAGCCTCAGCATATTTCTTAGGCATTCTTGTTTCTTAAAAGTTTTTTT
CCTAAAAAAATAAAACGTGTAATCCTTCAATAATATTTCATTATTTTGTT
TATTTCAGGTGCTGAAAGGGCTAGCCTACCTACGTGAAAAACACTCCATT
ATACACAGAGGTGAGACTTTCTTCTCAACTTTCGTTGGGTTTAGAATCTG
AGAATGTCTGTGTGTGTCCCATTTGGCTGTGGTCGGATTTGGCTGAAATT
GGGCACACTTGTTTCTTCGGTGAATATCTTGGGGGTAATTTTTAATAGTA
ATGTTTTGCTACAATCTTGCCTATAAATTATTTGTGAAGCTACTGCAGTT
GAACCGTGCATACGTTTGACTATTAATGTCATGGCCTGAAATAATGATTT
CAAGTGAGTTAGACAAGAAAAATTTCCGTTCAGGGTTGCTTTTGCTTGAA
AATTATGATTTTTGGTTCGGGCAAGGAGTAATTTTGATTGTACAATGTCC
TTTGTCAGAATGCAACTTTGTGCGTTTGCTTCCTCATAGTTAAAATTTTT
CTACATGTGTTATAGTAAGAACCAAAGACATAAGATTTTTCTAAATCATT
ATCGAACTGACAGTATTTAGAACTGTAGGCGGCAGCCGTATTTTTTTGTT
TGCTTGAGTATGACTATCAGATTTTTGTACTATAATTTTTTGCTCAGAAT
ATCATGCTCTACCCAATATTATTAATCGTTTCCATGGAATTGGCGTTTGA
AAATCGTCAGCTTTTTTCCCACTTTTTTCCTTTATAGTTGGGCCTGCTGA
CTTTGGCCCATAAAAATTATTGTCAGGCCTTAGCAGTGACCCCTGCAAAA
ATGACTTCAAATACATTCAACTTCGGAGAAAATACATTTGATTGCGCTCT
AGAAAAGATGCCATGGATCCTATTTGGCCTCCTACTATAAAGGGACGGTT
AAACGTCGGATTGTTCTACAATTGGCAATGAGGCCAGAAGCAGATGTGAG
AGGAAAGATCTATCAACAGCCTCCCCACATCCTGAAATGATGTATTTTCC
AAACCAATGCTATTCCAAAGATCCTGTATTGCCAGGGTTTCAGCCTCCCC
CCAGAAATCTAAAGGGCACCTAAGCCAGGTTGGGGTTGGGGGCTAATATT
TTGCAATTCTTTGGGGTTACCTATTCATTGGGGTTAGCTAGCTGTTTTGA
TGGAGGCTCTTGGGGCTGTGTATGTTTTCCAAATTGAATATTTCAAAATT
TTCAAATTATTCAGTTGTTTTACCCCAGCACCCAGTTTCCCCTTCCGATT
CTCTTGTTTCTTTTGTTTTCCATCACGTCATCTTTTGCTATATTTTTCAA
ATGTGATTGTTTTTATTTATAGCCGCCATCTTTATAGCATAAAAACAAAG
CTTTTCTCATGCGAGTGCGCTTCTCGCATCGTGCTAGCATAGAGAAGCTA
AAACCTCCGAATAAGAGTAAGCAAACATGATAGCTAGTTGTTTTTTTGGC
TCTGTTTAACTGTTTAACACTCACACTCATAACTGATTACAATCTTCTGG
TATACAAAAGGTGTCAATTCAAAAAAATTATCGGCTGAATGGGGGTACCT
AACTCAAAGCAATTTCTTAAGGGGCCCTAACTCGTTGGGGGCGCCATGCT
TCAATGATTGCTTTCCCTTTCCATGTATATATAACATGTCATCCAACCCA
AAGTCAGCACTCTTCCAAGAAATTAGTTATTTAAAAATGTTTCTAGTAAC
TTCTTCACCGTAACGAAATCTTTGTATTGTTAAACTCTGTATACATTCTT
TGTATTGTGTCGAGAATAGTTTTCAATTGCTTTTACAGACGTGAAACCAT
CGAACATATTGGTAAACACGAGAGGTGAAATCAAATTGTGTGATTTTGGT
GTTAGTGGTCAACTAATCGATTCAATGGCAAACTCGTTTGTTGGTACTCG
TTCATACATGTCGGTATGTTTCAACATTAATCTCAGTACTCAAAAGTTCT
GCCGTCTCAAAAAGAGATAGAAGAGGCCTTCTCAATCTCATTATGAAGCA
AATTTTTTTGAGATATTCCCCTTTGGTCTATTAATTTTGGTGGGGGTTAA
ATTTGGGGGATTTGATAGCAGTGTGCATATATTTAAAGCGAATCGACTAA
GTCTCCGCCGAAATAAATAGCGTTTCAGTCATCCGCCAAATCAAATTAAG
TACGTGCCAAGCTTGATTAAAGTAGTAACCTGGGCTAATTTTGTTGTCCA
TCTTCTATGCATCACCAAGTACGTTGAATTTTTCAAGACAACCAAAATTC
AAGAATCTCTTCGAATGACCCTTACTGCAAAGTTCAATTTGGGTCCAGAT
CTAGTGTTCGCCCCTCAGTTCTTGTTTAATGTCTTTCGTTTTATGTAAAA
GATTTCTCTTCTTATTTTTCTTAACAGCCTGAACGATTACAGGGAACAAA
ATATTCCGTCCGCTCAGATTTATGGAGCCTGGGACTCAGTCTAGTGGAAT
TAGCCATCGGCCGTTACCCAATTCCATGCATGACTTCAGATGATATTACA
AAAATACTGCGTGGTGACGCCAAAGGGGGCGTTGTGGTCCCACCCGGTGC
GGCCGCCCCAGCTGGCGTGGAAATAAAGGCGATGGCAATCTTTGAGCTTT
TAGATTATATTGTAAATGAGGTAAGATTTGACTTCTTTATAATAACAGGC
TTAGGAAGGAAACTAATTGCGTGCTTATAAAACTGGTTACTTTACCTCGC
CTACCATATTATCAAAATCTAACCTGATAACTTGAGTCCTTTAGTTATTA
ATTTGTTTCCTAGTCTATTTTGGGTAATTGACCTTGGACTCTTGATTTTG
AATGGCCAGTTTTAACTCAGTCTTCTTAAATGATTTCATAAAAATATAAT
TGTATTTACCGGGGGGGGACCCACTAAAAAATTAGAACGTTTCCCGACGT
CGTGCGGCCGAAAAAATGTCCCAAAGTGCTGGGAGTTTCGATATTTTGAA
AATAGATATCCTAACCTAAACTGGTTACTAAACCTAAGTTTTAATATTTG
ACAATTTATGTTTGATTAATACTTTTTCTTGGTTCTTTTAATATCTTTCA
ACGACTTTCTTCGCACCTTACAGGAACCACCCACACTACCGAAATCCTAT
TTCTCAAACGAATTTTGCGACTTTATTAACTTATGGTAAGTAATATTATC
AGCCCGGTCGACCCTGATGCTTTCTTTTTTTATCTATTCGAAATTCTTTA
GATAGTTATTTACTAGGCACTAGTATGGTAATTTCAAAATATTGCACTGG
ATATAAACTCTTGCATAAGCATAAACTCGCTTATTAGCGGCCTAAAGCGT
AATGCTTAAGAAGGAGATCAATGTGCGATTGACCTGGACTATACCGATAG
CAGTTAAGTGAGGCAGCTACCACAACATTAGAAGAATATCAAATTTTAGA
CATGGTGTTCAACAATGTTATAAGTTCTTTCGTCTCAGACGGATTTCTGC
CTCAGTTTCTGTCTCAAAAGAATACATGAATGATTTACCAAAAGTTCGAA
AAACCCTGCTTTGACCACTGGATCAAACTCAAACGTATTTTCTTTTTCTT
TTTTCCATTCAGCTTAAAGAAGAATCCGAATGATCGAGCCGACTTGAAAG
ATTTAATGGTTTGTTTTTTAAGAGAGCGTTCTGCCTTCTCTTGGTTTTCA
GTTTCTTGTTTTTTTGACCAACAGGTTTTGTTATAATTTTGACAGGAGTG
AGTTCACAGCTCAAGTTTGGCTTTAAATGAACTAAATAAATTAGAGAATA
CCTTCAAGTATTTTTGTCTAACTATTTTCCAAAGTCAAGAATTTTATAAA
ATGGGTTCTTACTCGTTCTTATGTTGAAGTTATATTGTTTTCTTACTAAA
AGTCAAAAATTTGTAGCTTGGAAAATAGACAAAAATTATTTGAGGTTTTG
CTCAGAGCATTAGAAGGAATCCACTTAAACCAGCTGATTAACCCTTGTTA
ANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNAGATGAGCAGGAGAAGGTTTGTGCTGCTACTTGTGCAGCTCT
TGTGATCGTTTGTAGTGCTGAACTTTTGAAAAGAAAAGTGAAGAAAAGAG
AAAAAGTTGGCTGAGTGACGGCGGGGGCTTTTATCGAAATTGTTCCTTCT
ACAAGGCATTAGAAAGCGGTAATCTAGGTATTCCCGAGCCAAGATTACTG
CCAAGTTCTAACGATCCCAATTACATCAATCATAAATCAGTACCTGTTTC
CTATGTTTTTGTTGGAGATGAAGCTTTTCCTTTGGGTATTCACTGTCTAA
AACCTTACAGTCAACAAGGCCTTACACTTAGAAGTCGTGTGTTCAACTAT
CGTTTATCTCGTTTCCGGAGAGTTACTGAAAATGCACTTGGCATTTTGGC
AAGTAGATTTTGAATCCTTTTGAACAAAATCCCACTTGATCCTGACAAGG
CTGTAACGATCACACTAGCTTCACTTGCTATTCATAATATACTTATGGAA
ATCTCAAGCGACTCTTATACACCAGAGGGCTTTATCGACGAAGTCGACGA
AGAAACTGGTTAAGTAACTGAAGGAGCATGGCGTGAGCAAAATTTAGCTG
ACTTGGCTTTCCTCGAATTGCAACAAAATCGAGGAAACAATGNTTACCAA
GCAGCCTCAATGTTTCTTAAGAAATCGGCCTTTTGAGCCTTAAATGTTTC
TTACATGTTTCTAAACTTTGTCAAGCTTAAAGGACGCATGTCCATAATAC
AATAGTGTAATTGACTAATCTACGGTACTTTCCTATCTTCTATATAGATT
TTTTGACTTTCTCAAGTGTTTCAAACTGTTATGTATGTATATTTCTGGAA
CCTTGATTGGAAAGTTCTTTAAAAAAAACGAATTAAAAATGCTATTTTCT
CATTCTCAGCCTCAGCATGTTTCTTAGATGTTTCTTAGTTTTTAGGCATT
CTGAGCCTCATGTTTCTTAAAAGTGTGTTTCTTAAAAAAAAAAAAACGTG
TAATTCATTATTGCTCCGTGTAAGAGGGCCTTTAAATAAAAAATTGTTTT
AACTTTTTCAGGAACATCAATGGGTTAAAGGAGCTGAAGAACAGATAGAT
GAAATAGATTTCGCCGGATGGGTCCAACGCCTCGATGACCCTGGACGACC
TACCAATGTGTAACAAGCTTTCACCAACAATTATATTTGCTGAGTAATCA
ACAATCGAACAAAATGGTATAAAGTCTTCATGTGTAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_015533XLOC_015533Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00027554-exon-sc0000632-1575043694:147031..147307TCONS_00027554-exon-sc0000632-1575043694:147031..147307Clytia hemisphaericaexon
TCONS_00027554-exon-sc0000632-1575043694:146748..146842TCONS_00027554-exon-sc0000632-1575043694:146748..146842Clytia hemisphaericaexon
TCONS_00027554-exon-sc0000632-1575043694:146333..146564TCONS_00027554-exon-sc0000632-1575043694:146333..146564Clytia hemisphaericaexon
TCONS_00027554-exon-sc0000632-1575043694:145782..145928TCONS_00027554-exon-sc0000632-1575043694:145782..145928Clytia hemisphaericaexon
TCONS_00027554-exon-sc0000632-1575043694:145440..145517TCONS_00027554-exon-sc0000632-1575043694:145440..145517Clytia hemisphaericaexon
TCONS_00027554-exon-sc0000632-1575043694:142898..142949TCONS_00027554-exon-sc0000632-1575043694:142898..142949Clytia hemisphaericaexon
TCONS_00027554-exon-sc0000632-1575043694:141095..141219TCONS_00027554-exon-sc0000632-1575043694:141095..141219Clytia hemisphaericaexon
TCONS_00027554-exon-sc0000632-1575043694:140388..140630TCONS_00027554-exon-sc0000632-1575043694:140388..140630Clytia hemisphaericaexon
TCONS_00027554-exon-sc0000632-1575043694:139873..139934TCONS_00027554-exon-sc0000632-1575043694:139873..139934Clytia hemisphaericaexon
TCONS_00027554-exon-sc0000632-1575043694:139400..139445TCONS_00027554-exon-sc0000632-1575043694:139400..139445Clytia hemisphaericaexon
TCONS_00027554-exon-sc0000632-1575043694:137271..137446TCONS_00027554-exon-sc0000632-1575043694:137271..137446Clytia hemisphaericaexon
TCONS_00027554-exon-sc0000632-1510915933:147031..147307TCONS_00027554-exon-sc0000632-1510915933:147031..147307Clytia hemisphaericaexon
TCONS_00027554-exon-sc0000632-1510915933:146748..146842TCONS_00027554-exon-sc0000632-1510915933:146748..146842Clytia hemisphaericaexon
TCONS_00027554-exon-sc0000632-1510915933:146333..146564TCONS_00027554-exon-sc0000632-1510915933:146333..146564Clytia hemisphaericaexon
TCONS_00027554-exon-sc0000632-1510915933:145782..145928TCONS_00027554-exon-sc0000632-1510915933:145782..145928Clytia hemisphaericaexon
TCONS_00027554-exon-sc0000632-1510915933:145440..145517TCONS_00027554-exon-sc0000632-1510915933:145440..145517Clytia hemisphaericaexon
TCONS_00027554-exon-sc0000632-1510915933:142898..142949TCONS_00027554-exon-sc0000632-1510915933:142898..142949Clytia hemisphaericaexon
TCONS_00027554-exon-sc0000632-1510915933:141095..141219TCONS_00027554-exon-sc0000632-1510915933:141095..141219Clytia hemisphaericaexon
TCONS_00027554-exon-sc0000632-1510915933:140388..140630TCONS_00027554-exon-sc0000632-1510915933:140388..140630Clytia hemisphaericaexon
TCONS_00027554-exon-sc0000632-1510915933:139873..139934TCONS_00027554-exon-sc0000632-1510915933:139873..139934Clytia hemisphaericaexon
TCONS_00027554-exon-sc0000632-1510915933:139400..139445TCONS_00027554-exon-sc0000632-1510915933:139400..139445Clytia hemisphaericaexon
TCONS_00027554-exon-sc0000632-1510915933:137271..137446TCONS_00027554-exon-sc0000632-1510915933:137271..137446Clytia hemisphaericaexon
TCONS_00027554-exon-sc0000632-1491911889:147031..147307TCONS_00027554-exon-sc0000632-1491911889:147031..147307Clytia hemisphaericaexon
TCONS_00027554-exon-sc0000632-1491911889:146748..146842TCONS_00027554-exon-sc0000632-1491911889:146748..146842Clytia hemisphaericaexon
TCONS_00027554-exon-sc0000632-1491911889:146333..146564TCONS_00027554-exon-sc0000632-1491911889:146333..146564Clytia hemisphaericaexon
TCONS_00027554-exon-sc0000632-1491911889:145782..145928TCONS_00027554-exon-sc0000632-1491911889:145782..145928Clytia hemisphaericaexon
TCONS_00027554-exon-sc0000632-1491911889:145440..145517TCONS_00027554-exon-sc0000632-1491911889:145440..145517Clytia hemisphaericaexon
TCONS_00027554-exon-sc0000632-1491911889:142898..142949TCONS_00027554-exon-sc0000632-1491911889:142898..142949Clytia hemisphaericaexon
TCONS_00027554-exon-sc0000632-1491911889:141095..141219TCONS_00027554-exon-sc0000632-1491911889:141095..141219Clytia hemisphaericaexon
TCONS_00027554-exon-sc0000632-1491911889:140388..140630TCONS_00027554-exon-sc0000632-1491911889:140388..140630Clytia hemisphaericaexon
TCONS_00027554-exon-sc0000632-1491911889:139873..139934TCONS_00027554-exon-sc0000632-1491911889:139873..139934Clytia hemisphaericaexon
TCONS_00027554-exon-sc0000632-1491911889:139400..139445TCONS_00027554-exon-sc0000632-1491911889:139400..139445Clytia hemisphaericaexon
TCONS_00027554-exon-sc0000632-1491911889:137271..137446TCONS_00027554-exon-sc0000632-1491911889:137271..137446Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000632supercontigsc0000632:137271..147307 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
3.71729	4.26953	5.62322	7.19208	2.54625	4.06969	2.65891	3.51963	4.46699	5.2895	6.07267	4.99147	2.92146	8.56933	4.38837	5.35928	7.23007	6.01607	2.94071	3.96198	4.67658	1.65213	4.73819	6.84195	3.62779	4.15063	4.01698	2.27621	3.0018	3.95033
Blast
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BLAST of TCONS_00027554 vs. Swiss-Prot (Human)
Match: MP2K2 (Dual specificity mitogen-activated protein kinase kinase 2 OS=Homo sapiens GN=MAP2K2 PE=1 SV=1)

HSP 1 Score: 452.981 bits (1164), Expect = 2.028e-155
Identity = 227/355 (63.94%), Postives = 272/355 (76.62%), Query Frame = 2 
Query:  431 DVNEDQKSRLEEFLRDKQKIGSEIKDGDFERMEELGAGNGGVVMKMKHIPTNLIMARKLIRLEIKPAIRNQIMRELKVLHECNSPYIVGFYGAFQNDGEISLCMEYMDGGSLDVVVKKAERIPEKILGVVTYCVLKGLAYLREKHSIIHRDVKPSNILVNTRGEIKLCDFGVSGQLIDSMANSFVGTRSYMSPERLQGTKYSVRSDLWSLGLSLVELAIGRYPIPCMTSDDITKIL------------RGDAKXXXXXXXXXXXXXXXEIKAMAIFELLDYIVNEEPPTLPKSYFSNEFCDFINLCLKKNPNDRADLKDLMEHQWVKGAEEQIDEIDFAGWV---QRLDDPGRPT 1450
            +++E QK RLE FL  K K+G E+KD DFER+ ELGAGNGGVV K++H P+ LIMARKLI LEIKPAIRNQI+REL+VLHECNSPYIVGFYGAF +DGEIS+CME+MDGGSLD V+K+A+RIPE+ILG V+  VL+GLAYLREKH I+HRDVKPSNILVN+RGEIKLCDFGVSGQLIDSMANSFVGTRSYM+PERLQGT YSV+SD+WS+GLSLVELA+GRYPIP   + ++  I                +          +        AMAIFELLDYIVNE PP LP   F+ +F +F+N CL KNP +RADLK L  H ++K +E  ++E+DFAGW+    RL+ PG PT
Sbjct:   45 ELDEQQKKRLEAFLTQKAKVG-ELKDDDFERISELGAGNGGVVTKVQHRPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKEAKRIPEEILGKVSIAVLRGLAYLREKHQIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTRSYMAPERLQGTHYSVQSDIWSMGLSLVELAVGRYPIPPPDAKELEAIFGRPVVDGEEGEPHSISPRPRPPGRPVSGHGMDSRPAMAIFELLDYIVNEPPPKLPNGVFTPDFQEFVNKCLIKNPAERADLKMLTNHTFIKRSE--VEEVDFAGWLCKTLRLNQPGTPT 396
The following BLAST results are available for this feature:
BLAST of TCONS_00027554 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
MP2K22.028e-15563.94Dual specificity mitogen-activated protein kinase ... [more]
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