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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00027505 ID=TCONS_00027505|Name=TCONS_00027505|organism=Clytia hemisphaerica|type=transcript|length=243bp
GGAGTGATGGTTCGACAATTATGTAAAATCTACGATGAAAAAGGATGGAc
agtttttcagaaaagattaaaTCCGCTAAAATATCAATTTCACGAAAAAA
CTTGGCAGCAATACACAGAAGGTTTCAAGGAGAGCGATGAGGATTTTTGG
TTGGGATTGACAACTCTCAACCTCATGACGCGATCAAAAGAAAATGAGTT
GACGATTGGTGCTCTGCAAGAAAATGGTGAATGGTGGGGTAAG Run BLAST on NCBI transcript from alignment at sc0000631:98293..99756+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00027505 ID=TCONS_00027505|Name=TCONS_00027505|organism=Clytia hemisphaerica|type=transcript|length=1464bp|location=Sequence derived from alignment at sc0000631:98293..99756+ (Clytia hemisphaerica)
GGAGTGATGGTTCGACAATTATGTAAAATCTACGATGAAAAAGGATGGAc
agtttttcagaaaagattaaaTCCGCTAAAATATCAATTTCACGAAAAAA
CTTGGCAGCAATACACAGAAGGTAAAgatcttttatttatttctaatcTG
TGCTGTAAAAGTTTGAATTAGATTTACGACggttttgatgtgtttttgAT
TGACAACTCCGGtgatttctagattctaggccggcgatggactagcaagc
gtctgtctttccttggacacggAAACACGGGAATATTGCTTATAAAgagt
tcttttgaaaaaatagaaatttccgTCAGAGAGTGGTTTGGAAAGCCATT
ATATTCAGCGAACCAAGTGAAGAGCTCATTGTAAGCGTAAACTGTAGCGA
AATATGACggcgtggtttactagtctatgcCGGCGAATtcgaaaattcga
attagaaagccaagtgtattgattagcgtgAATATAACGTAGAaacaaac
tttcttttaatATTAGAGTGAATTTGTACCCCTGAAATCAGCATTGGGAC
TAATGTTTTCTTCATTCTAAAGAAAGAGAAGGAAGCTTTTAAGCCGGTAC
ATcccaacgttcatctaacgttgtatGAACCTGGTCAGATGGACCTTATT
AATACATCGTTCTGTGTCAGCTGGGTTTCTAAAGGTCAATGTTATAACAT
TTTCCACCATGACTTCATCGATTTCAGTACAGTATACAAATCCGGTGGGA
CCACCTACATAGATACCTACAATCATGgtgaaaatatttgagaaaaaagg
gaaattcccacgaaatcttacaaccacaaacgatttggaagcgctctaaa
ttagctTGGACGGGTGgcgttttaactctgagttttaacgctaagATCAA
GACTAAAAGTCCAAGaaggtccaatagggctcagaatatagcctggaagt
ctataaacgcctcccgaattgaaatattcgaataaatttatcaatttgcc
caaaagcaactttttcgcccgaactttaaattgctgaaaacAAGGAATTA
GCCAAAATTCCCAATAATATATTTTGGCCGAGATTGTACTAGGAAACAGC
CAATAAGACAGGGGTTCGAATCGGAACAACAACGAGTGAAAGTGAAGGAC
TGGTGTCTAACCTTGTCCTTCGAAAGTCGCACGAAGCAGATTATCTGGTG
tcgaaaaaagatttaaaatcgAAATCCTACTTCTTGTTGCATATATGAGC
TTTATTGTAAACCAAGGTTAACTTGCTAAATTCTATTTGCGATGCTTCGA
ACACAATTTCAATTGTTCTCTACTCTATTGTCTTGTTTTAAGGTTTCAAG
GAGAGCGATGAGGATTTTTGGTTGGGATTGACAACTCTCAACCTCATGAC
GCGATCAAAAGAAAATGAGTTGACGATTGGTGCTCTGCAAGAAAATGGTG
AATGGTGGGGTAAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00027505-exon-sc0000631-1491911889:98293..98413 | TCONS_00027505-exon-sc0000631-1491911889:98293..98413 | Clytia hemisphaerica | exon |
| TCONS_00027505-exon-sc0000631-1510915933:98293..98413 | TCONS_00027505-exon-sc0000631-1510915933:98293..98413 | Clytia hemisphaerica | exon |
| TCONS_00027505-exon-sc0000631-1575043694:98293..98413 | TCONS_00027505-exon-sc0000631-1575043694:98293..98413 | Clytia hemisphaerica | exon |
| TCONS_00027505-exon-sc0000631-1491911889:99635..99756 | TCONS_00027505-exon-sc0000631-1491911889:99635..99756 | Clytia hemisphaerica | exon |
| TCONS_00027505-exon-sc0000631-1510915933:99635..99756 | TCONS_00027505-exon-sc0000631-1510915933:99635..99756 | Clytia hemisphaerica | exon |
| TCONS_00027505-exon-sc0000631-1575043694:99635..99756 | TCONS_00027505-exon-sc0000631-1575043694:99635..99756 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000631 | supercontig | sc0000631:98293..99756 + |
Blast
The following BLAST results are available for this feature:
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