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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00027371 ID=TCONS_00027371|Name=TCONS_00027371|organism=Clytia hemisphaerica|type=transcript|length=1555bp
GTACAAGGTTGTCAGACCAGAAAAGTGATCTAAAAAACTTAAATTACGAT
AATTACAAGGATTTAAAGACTTTGATTTTTGGAAAGGGTCAATTGATTTT
AAGTCGAAAATAGTACCACCGCGTGGAAAAGAAAGGGATTGTTTTGGATA
GTTTTAGTTAGAAATGATGCTTTACCTTTCAAGAGGGAAATTATCAATTT
TGATTGGATGTTGCTGTTTGTTTCAGATGATCGAAAGCTATTGGTGGAGC
CTTGGTCAAATTCAAGTCAACAACATACCACAACATCTTCTCATCAATTC
GTACAGATTAACACGTCAGCAAAAACTCATCAtagaaaccacacccaaat
tATTGGAATCAGTCAGTAGAGGTGCTTCTTTGGCTACACAAGAATGTCGA
CGACAATTTCAATATAGAAAATGGAATTGCCCAATACATACCTCACAGTC
AGTGTTTGGAAGGATATTGAAAAAAGCATGTAGAGAAACAGCGTTTATCT
ACGCCATCACGTCAGCCGGTGCCACATATGCGTTAACTGAAAACTGCGCT
AAAGGTCTAATTAAAGATTGCTCGTGTCGTCAAGGCAACAGTATTCCTCA
ACCCAAACTCCTTAATCCACATTTACCTCCAAAGCAACAAGAACTTATTT
ACGAAGGTTGTCATGACAATATTCAATATGGCTACCAGCGTGGTAAAGCG
TTCGTAGATGCAACAGAAGGAAGTCGTGATTTTCATGCCTTTGTTAATCT
TCACAACAACGAGGCTGGAAGACAGGCTGTTATCGACTCTATGGTTATTC
AGTGTAAATGTCACGGAGTATCTGGGAATTGTAATGTCAAGACATGCCGC
AAAGCATTACCCAAATTCTCAGAGGTCGGCAAGCGCCTTATCACACAGTA
TGATACAGCTGCTAAAGTTCAAGCGGCCCAAATATTGAGCACGCGGCGTA
TTGGAAAATCAGCTCGAGTATTAGGTGACGAAATTAGCATACCACGTTCG
AAAAGTGATATTTTTCGACAGCCACAGAAACAAGATTTAATTTTTATAGA
AGATTCACCTAATTTTTGTGTTAAGAATGTAGAACATGGTTCAATGGGGA
CTCAAGGACGATATTGTAATTCTTCATTACGTGCTAAAGGAACTCAAGGT
TGCGATGTCTTGTGTTGTGGCAGACAGTTTGTAAAAGAGAAATTAACAGG
TCCTGAGAAATGTAATTGTAAATTTATCTGGTGCTGTGAAGTAACTTGTG
AACAATGCATTGTAACGAGGGAATACAGTAAATGTAGATAATCTTTAGAC
CaatgttcattaaaaaaaacctgACAAAATTTTTACAACATAGTTTTATA
TGATAATTTTATATGattttagaaagaaagaaagttttATTGTAGTTGTT
TAATCTCATGCTAAGAATTTCAATGCGAAAAGGGTAAGAATTAAACGACG
TTccttttgatagaaattatatgcAATACTATAGTTTTATCATATTATAG
CTGCCGGGGACATGCGATCGGTGTATAATAAATAACGGACCATGTCAGAC
AAACC Run BLAST on NCBI protein sequence of WntX2 >TCONS_00027371-protein ID=TCONS_00027371-protein|Name=WntX2|organism=Clytia hemisphaerica|type=polypeptide|length=375bp
MMLYLSRGKLSILIGCCCLFQMIESYWWSLGQIQVNNIPQHLLINSYRLT
RQQKLIIETTPKLLESVSRGASLATQECRRQFQYRKWNCPIHTSQSVFGR
ILKKACRETAFIYAITSAGATYALTENCAKGLIKDCSCRQGNSIPQPKLL
NPHLPPKQQELIYEGCHDNIQYGYQRGKAFVDATEGSRDFHAFVNLHNNE
AGRQAVIDSMVIQCKCHGVSGNCNVKTCRKALPKFSEVGKRLITQYDTAA
KVQAAQILSTRRIGKSARVLGDEISIPRSKSDIFRQPQKQDLIFIEDSPN
FCVKNVEHGSMGTQGRYCNSSLRAKGTQGCDVLCCGRQFVKEKLTGPEKC
NCKFIWCCEVTCEQCIVTREYSKCR Run BLAST on NCBI transcript from alignment at sc0000619:176576..184550- Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00027371 ID=TCONS_00027371|Name=TCONS_00027371|organism=Clytia hemisphaerica|type=transcript|length=7975bp|location=Sequence derived from alignment at sc0000619:176576..184550- (Clytia hemisphaerica)
GTACAAGGTTGTCAGACCAGAAAAGTGATCTAAAAAACTTAAATTACGAT
AATTACAAGGATTTAAAGACTTTGATTTTTGGAAAGGGTCAATTGATTTT
AAGTCGAAAATAGTACCACCGCGTGGAAAAGAAAGGGATTGTTTTGGATA
GTTTTAGTTAGAAATGATGCTTTACCTTTCAAGAGGGAAATTATCAATTT
TGATTGGATGTTGCTGTTTGTTTCAGATGATCGAAAGCTATTGGTGGTAA
GGTCCTTCATATCACGTGCCCCACCCCGTTGTAACTCCTATTCACATTAC
AAAGACCCGCTTCACCATTGGGGAAAATCTAATTTTACTTCGAAAGAAAT
TAGCAATATCAATAAAAACAATACCTAGTATCAAACGCCTCCCTCCTCCC
TAAACTCTTTTGACCCTCGATGTGTCACTGGACTTCCTTCAGATATCCAA
ATACTTCCCGTGACACTGGATATGATGTAAAAGTTTGAGGGTCCAATTCT
ACGGGTCTTACCAATCGCTCTGATTGATGCTCAGCAATTGAAGTAGCTTG
GATATCCAGACTGCAATTGAAAAGGTTCAGCGCTGGGGACAACTGCTATC
GAAAAATAAGCCTTATTTTAGTCAATTTGCAATCGCATAAAAGTAAATTA
CTTTCCTTGCTAACTACCTTAAGGGGACTTATTTTGGCGAATTTGGAAAA
TTTAGAATTTGCCAAAATAAGTTCTCGCCAAAATTAAATTTTCTGGTATT
CAATAGATTTACACTGTCATTCGCCAAAATTAGTTCCCGCCAAAATTGTT
AGGATTTTTGCCGCTCGTAAAAATTAGTTCCCGCCAAAATAAGTTCCCTT
AAGGCAGTTGGGCAGGCACTCTACGAAAAAGATTGTATCAGTTTTCATGT
TAGCCTTGTTTGATGTTGTTAACAAAATCCCTATTGTCTCCTTGAAGAAG
ATTGAATGAGGAAGGAAGGCTATCTTAGTTGCTTCAAGTAATGTTGCGAT
GAGATGCACTGCGGTCATCTGAGTTACAGACGTAACGGTCTTGAAAAAAT
GTTTATCCGGTTCGAGCTATCATTTAAATCTTGTTAGTATTCTACTAATG
TTATTAAAAGGATCCATACATTTCATGATAAAATTGTTTTATTTTCCTTT
CCTTTACCTAGCACGACACAATCTCTTTCCCAGTGCATGGTCGGTTTTTT
ATGCTTACTATAGCGCCAGATTCTCCGACGTTCACCAGTAAATAAAATAG
AACCTTGAACACACGGGTACGAGGTTGCGCCATAACATTAAATACTTAGG
CTACACTCAAATATTCTGAAACAAAAGGGTTTCACCGAAAGGTGTGCTGA
CATAAAGTTCCAAGTTTTTGTAATGCAGCAAAAGGTTCTATTTTCAAAAG
TGACAAATCAAAATCTGACATTGAATTACCTTGTCGGCCCCCTTACGCCT
GCCCGTATTATTAACAATTTTCTATTTGGAATATCTGGGCTAATCTAAGT
AATTGAATTATGTAAAAAATGGCAAAAGATAAACGTTTATGAAAATTCAC
TATAGTACTTTCAGTTCTTTCAGACCATTTTTTTGCAACACAACTATCTG
TAACAAAATTTGAGGCTAAAATTACACCATAATTTGGGCCCGTGTAAAAA
GGCCGATAAAGTAGTTGGCAAAATGACAAAAATGATGAATCATCAAAAAA
GGAAGAGTGGGAACGATAAAAAATGGGGAAGTAGACGTGATGACGTTTTT
CACAACTGTCTTAAAGTCACATCAATTTAATCTCATCAAGGTTAGGGTGT
AACATGATGGGATACTAGTATGTAAAGGAATAGACAATTTCTAGCTGAGG
TAGTATGAATTCTGAGGTCTTTCCTTTAACGAGTTGCCGACAAAAAAGAG
CAAAAAGTCACACTCCAACGATAGAACTCTCGACCGATAAAGCATAGATA
AAAAAATAGGCAAAAGATGCTAAAAGACAGAAAATTTGAAGACATTTTTG
AATTCGTCTTGGGAGTGGATAGGGAATGCTTTGATGTTAACCTGGTGTTA
ATTGGTTAGTCAGTGTTTTGTCTGGATTTCATATTTTGCGTCTTCTCACT
AGCCTGACTGGAATTTAGCTATTGCAATGGACTTTACAATTATGATGGCT
TTTTCTCATGGAAATGTAAAGGCGTGATTCCCACAGTAGTAAACTTAACC
TCAATTTGCTTTCCGATAATACAACGTCCAGTGGAGTAGTAAATTCTACA
GTGGAGTAGTAAATTCTACAGGTTGAAAAGTCTGCAATAGCATCCCAGCT
GACACACAACGTTCTTTTAACGTTTATCCAACGTTCACAACGTCCATATA
ACGTTAGATGAACGTTAAAACAACGTTGTGTGCCAGCTGGGATACCGTGG
TGAATCTAAGATTACCGAGTTTATGTATCGGGGGATATCGAAGGTGACGG
TAAGTGGGATCGATACAAAACAAAGTCGATAGTTGATGTACGGCTCTTTA
TCGCCTTTGCTCACCTAAACAGACGACGGTATTTCGGTGTTTTTACCGTC
GTCAAGCAAAGTGGACGGTGATTTTCGAGACATGTTAATTTTGCTTTATA
CCGTCCCCTCATATCTCAAATACATAAACTCGCTAATAACAACAAACCTG
CACAAATTTATTAGTTTGTGTGACTTTTAATCCCATCCTCCTTTGCGTTA
ATTGTTCTTGACCTTTACTGTAGGATGGCTTATCTTTCAGCTGTTATCCT
CGGAAACACCGGCAAAAACAATATTTCTGCTGCTTACAAATGCGTGTACA
GCATCCTTAGAGGCCTCCTGAAGTTACTTTTTTTTACCTACTCATAATCT
TGGTCTTTTACTTTGTAAAGTGGCGATAAGAAAGTTTTGTCAGAAATGAG
AAAGTTAAGTAGCAAGTTCACGAATTTTCACTTTTGAGGACGACAGAGTG
ACTGAATCGATTCGAAACAAACCACAGTTTTGGCCCGCAAAATTGAGGAC
GGTAAAAGTGATGTACCATCGTTCTCAGTCAATCAGGGTATAGACAAATT
AGAAGCTAACCGAACAAGTTTCTTCCAGTGGTGTGAATACCTTTTTTCTA
GTAGGGGGATTGGTGCTAAGTCGAAAAATACAAAGCGTGACCTTAACTAT
TTTAAAAAATTACCTTGACGTCAAAAAATACTTAATTTGCGAGGGAAAAG
TGCCTCTTAAACATGTCTATTTGTGAGTTAAGTCCAAATTTTCTTCATCG
ATTGGACTTGAGTGTTTACTACACGCCTAGACATTTTTAATCTGAAATAT
CCTTTGTAATGTTGGAAAAACAACATAAAAGGATAATTTGTAAACAGGAG
CTTTATAGCTTTTCCATTGAATTTTCTGTCATGGCATTTAAGGAATCGTC
TTTTCAGAGTCATTACTGAAAAGGTGATTCCTTCAAGTTCAACTTTGACA
GATCAAACAATGAAAAGCATGGAATTTCTCAAAAACTGCANNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGTCATCATTA
GGCGTTTGACAAACCGAACAATTGCGCGGAACAATAGAATTGAAAAGAAT
ACTGCAAGCAATTACAAATGCCAGGCTGGTCTAAACGCAGCCAATCAGGG
CATAATCATTACTCTCGATGTGTTTGTACGAGTTTCAATCCCATCAACCT
TTGCGTTAATCTCTTTTTCACGTTAATTGCATCATTTGACAAAAGATATA
TAACACTTTGCACGTTTCTTTAATTGAGCCGCATTGAATTGTGGGATTGC
AACTCGTACAAATGTCAAAAAAAGTGAAATGAAATAATTATGACGTATGC
GTTGCGGAGCGCTATTCTATCCCGGCGATCTCTGAACAAGAGCTGAAAAA
AAATCCCTGTGGAGAAAGGTTTTTGAGACGATATTTTTTGAATGTTGGAC
AGTTTTCATTGAAATTCCCTCAATGGGCATAAATTTCAGAATTCTAGCTA
ACAACACTCTTTTTCCTTTATAAGAACAATTTAATAAGAGTAATGAGGGG
GCAATGAGGCTCAAAATCGCTAAAAAAAAGAATGGGATTGCTCAACTTTA
AGCAAGTTAAGGGTAAAACTTTGGTATCCTAAAATATCTTAATTTAATTA
TAATAAGAACAGGATAAGAACAATTTAAATCTCAAAGTGCCAAAAAAATA
AGAACAGGCCAAGCTTCATCAAAAGCTTACTGGTTCTTACGAGACAAAAA
GTGTAACTAACAACTCTGTCTCTTTTCAGGAGCCTTGGTCAAATTCAAGT
CAACAACATACCACAACATCTTCTCATCAATTCGTACAGATTAACACGTC
AGCAAAAACTCATCATAGAAACCACACCCAAATTATTGGAATCAGTCAGT
AGAGGTGCTTCTTTGGCTACACAAGAATGTCGACGACAATTTCAATATAG
AAAATGGAATTGCCCAATACATACCTCACAGTCAGTGTTTGGAAGGATAT
TGAAAAAAGGTAAGGGGAGAATTGAAACAACTTCTTCTAGATTTTTCTTA
TTGCTTCCTTTTTCTTGAAGAAGACGCTATCTTGTCACACCCGATGTGAC
CACTAACTTTTATACCCCTGAACCCAAGCCATACCCGCCATCTTTGAACA
GAGCTCAAGTGGTTTCCTAATGGTGGCACTACTCGATGTGGGTCGATTTG
CAATTCGATTAAATTTTCAGTTCAAAAGTTTTTCCCCCAAGACTGGATGA
AAAGATTTTGCTTGGAAATTGAGCCCAGGGTACATAAAAGTCAGTGGATG
GGACCTATCATCCATGGTTAATCGGCCAATAAAGCATCCTAGAAAGGAGT
GTGAACAATTTACAAAGTTGACCGTGATAACTTTGGCGTATGAAATCTAC
TCTCATCAGCAGGAACCTAGGCTACTAAGTGAGAGGTGTCTGTGTCTTTT
CAAAGATCTGTGATTATGATGAATAAGGATAAAAATCAAAAATTTAAAAG
TTTAGAGTCCAGACCTTAGAATCAATTTATAAATTGGGCTAAGATTCAAC
CAACGCTGATGTTCCAAAGACCAATGGATCTAACAATGTGCTAGCCTGTA
TCAAACTCTTCCTCACTATAAAGATAACATGAAGACCACACGCGGAAAAG
GTTTCGATAAATATAGATAATCGTTCAGGAACAGGGTGGTGCAGGCTAGC
CAAGTGATACCCCTGTCTCACAGCCCCGGTGGAACTTTCCCACACGTACA
GTGGAGATTTCGAAATCCAAGTGTGGATTGAAATTATTTTGTTTCAAGCT
TAAAATATCCAGAGGAGACAGTTTTTGAGTACAATTTTTTACATTGAGTT
TCAGATGGGGATGAAAGTAAAGTCTATTTCCCAGTCGGCTGAAACTTCAG
GATATTATTCCCACCGGGGACGAAATTTTGGCTAAATTTTCAAGTGGGGC
TAGGGTCCCAGCGGGTCTGCGGGATAAAGGAGTGTCGAGTGCTTGCTATG
GCAGGGATTGATTTTCTCTGCATCCTTGTTTTCTGACTTGTCTTGTCGTG
AAATCTATTTTATCCTTAAGACAAAAAGGAAGACCGCCAAACTCCAGAGT
CAAGTACCGTAAAGTTTGATTCCTTTAAAAAAGCAATAGACTTGAAATAA
CTGACAACCACACTTAAGGAGGATATAGGCTTCTTTAGGTAGATTAAAGG
ACACCGCGCATTAAATGTCTATATCAAGGTGGTCTAAAATGGTTAATAAA
CAATAAATTGTTTATGTCTGGAAAGATACTATCTTCTTGTGACCCAGCCC
TAGATATTTATAAAAGAAATAGGAAGTAGGGGCCAATCCTTATGATCTTT
ATTGTCTTTCTTGGGAGTTAAATGCATGTGTTTGGCTCGAAAGAAGATAG
GATTTTGAAAAAAGGTGCCTGCGGATTATGCCTGGCAAAGGTTTTGATGA
CCAAAAATCTGATGTTGTAGGGAAAATGAAACACGGAAAGTTCTTTGAAA
GACAGAATAAGATTTCTTATTTTTCATGTCCCCTTATGTCAGAAATAACA
AAAAATTTTCGCCCCAGTACTTTGGTAGTACACGAACATTTATTACACAT
GGCACGTTTCAGCAACTTTTCCTGAATTACCCAATAAATTGAATGTATTT
ATCTCTTATCATTTTAGCATGTAGAGAAACAGCGTTTATCTACGCCATCA
CGTCAGCCGGTGCCACATATGCGTTAACTGAAAACTGCGCTAAAGGTCTA
ATTAAAGATTGCTCGTGTCGTCAAGGCAACAGTATTCCTCAACCCAAACT
CCTTAATCCACATTTACCTCCAAAGCAACAAGAACTTATTTACGAAGGTT
GTCATGACAATATTCAATATGGCTACCAGCGTGGTAAAGCGTTCGTAGAT
GCAACAGAAGGAAGTCGTGATTTTCATGCCTTTGTTAATCTTCACAACAA
CGAGGCTGGAAGACAGGTAAGGTCAACTCCTAATTTTGTAGTTGATATTT
TACGTGAAAAATACTGCACTCAAAGATATCCCGTTCCAGTTGTTGAGGTT
GTTTGGGGGGCGTCACTCTCATTGTGAGAGTCTTTGCCCACTCAAAGATA
TCCCGTTGATTTTAATTCAAAATCAAAATTTTACGTTAACATTTCTATAT
TTTATAGTTTTGATGTTGATAAATTTAAATCCTATTGTTTCCCAACGCGT
TTATAAGCATATGCAGGCTCAGCTTTTGGTATCTAAACAATTTCCTGTAG
ATACTATAGATGCTAGCATTTAATTTTGCTGACACCCAAAACCACCCCCT
TTTGTATTTTATTTTTTACTGATAAATCTCCTACTTTCATTTTAGGCTGT
TATCGACTCTATGGTTATTCAGTGTAAATGTCACGGAGTATCTGGGAATT
GTAATGTCAAGACATGCCGCAAAGCATTACCCAAATTCTCAGAGGTCGGC
AAGCGCCTTATCACACAGTATGATACAGCTGCTAAAGTTCAAGCGGCCCA
AATATTGAGCACGCGGCGTATTGGAAAATCAGCTCGAGTATTAGGTGACG
AAATTAGCATACCACGTTCGAAAAGTGATATTTTTCGACAGCCACAGAAA
CAAGATTTAATTTTTATAGAAGATTCACCTAATTTTTGTGTTAAGAATGT
AGAACATGGTTCAATGGGGACTCAAGGACGATATTGTAATTCTTCATTAC
GTGCTAAAGGAACTCAAGGTTGCGATGTCTTGTGTTGTGGCAGACAGTTT
GTAAAAGAGAAATTAACAGGTCCTGAGAAATGTAATTGTAAATTTATCTG
GTGCTGTGAAGTAACTTGTGAACAATGCATTGTAACGAGGGAATACAGTA
AATGTAGATAATCTTTAGACCAATGTTCATTAAAAAAAACCTGACAAAAT
TTTTACAACATAGTTTTATATGATAATTTTATATGATTTTAGAAAGAAAG
AAAGTTTTATTGTAGTTGTTTAATCTCATGCTAAGAATTTCAATGCGAAA
AGGGTAAGAATTAAACGACGTTCCTTTTGATAGAAATTATATGCAATACT
ATAGTTTTATCATATTATAGCTGCCGGGGACATGCGATCGGTGTATAATA
AATAACGGACCATGTCAGACAAACC Coding sequence (CDS) from alignment at sc0000619:176576..184550- >TCONS_00027371 ID=TCONS_00027371|Name=TCONS_00027371|organism=Clytia hemisphaerica|type=CDS|length=4512bp|location=Sequence derived from alignment at sc0000619:176576..184550- (Clytia hemisphaerica)
GCTGTTATCGACTCTATGGTTATTCAGTGTAAATGTCACGGAGTATCTGG
GAATTGTAATGTCAAGACATGCCGCAAAGCATTACCCAAATTCTCAGAGG
TCGGCAAGCGCCTTATCACACAGTATGATACAGCTGCTAAAGTTCAAGCG
GCCCAAATATTGAGCACGCGGCGTATTGGAAAATCAGCTCGAGTATTAGG
TGACGAAATTAGCATACCACGTTCGAAAAGTGATATTTTTCGACAGCCAC
AGAAACAAGATTTAATTTTTATAGAAGATTCACCTAATTTTTGTGTTAAG
AATGTAGAACATGGTTCAATGGGGACTCAAGGACGATATTGTAATTCTTC
ATTACGTGCTAAAGGAACTCAAGGTTGCGATGTCTTGTGTTGTGGCAGAC
AGTTTGTAAAAGAGAAATTAACAGGTCCTGAGAAATGTAATTGTAAATTT
ATCTGGTGCTGTGAAGTAACTTGTGAACAATGCATTGTAACGAGGGAATA
CAGTAAATGTAGATAACATGTAGAGAAACAGCGTTTATCTACGCCATCAC
GTCAGCCGGTGCCACATATGCGTTAACTGAAAACTGCGCTAAAGGTCTAA
TTAAAGATTGCTCGTGTCGTCAAGGCAACAGTATTCCTCAACCCAAACTC
CTTAATCCACATTTACCTCCAAAGCAACAAGAACTTATTTACGAAGGTTG
TCATGACAATATTCAATATGGCTACCAGCGTGGTAAAGCGTTCGTAGATG
CAACAGAAGGAAGTCGTGATTTTCATGCCTTTGTTAATCTTCACAACAAC
GAGGCTGGAAGACAGGAGCCTTGGTCAAATTCAAGTCAACAACATACCAC
AACATCTTCTCATCAATTCGTACAGATTAACACGTCAGCAAAAACTCATC
ATAGAAACCACACCCAAATTATTGGAATCAGTCAGTAGAGGTGCTTCTTT
GGCTACACAAGAATGTCGACGACAATTTCAATATAGAAAATGGAATTGCC
CAATACATACCTCACAGTCAGTGTTTGGAAGGATATTGAAAAAAGATGAT
GCTTTACCTTTCAAGAGGGAAATTATCAATTTTGATTGGATGTTGCTGTT
TGTTTCAGATGATCGAAAGCTATTGGTGGCTGTTATCGACTCTATGGTTA
TTCAGTGTAAATGTCACGGAGTATCTGGGAATTGTAATGTCAAGACATGC
CGCAAAGCATTACCCAAATTCTCAGAGGTCGGCAAGCGCCTTATCACACA
GTATGATACAGCTGCTAAAGTTCAAGCGGCCCAAATATTGAGCACGCGGC
GTATTGGAAAATCAGCTCGAGTATTAGGTGACGAAATTAGCATACCACGT
TCGAAAAGTGATATTTTTCGACAGCCACAGAAACAAGATTTAATTTTTAT
AGAAGATTCACCTAATTTTTGTGTTAAGAATGTAGAACATGGTTCAATGG
GGACTCAAGGACGATATTGTAATTCTTCATTACGTGCTAAAGGAACTCAA
GGTTGCGATGTCTTGTGTTGTGGCAGACAGTTTGTAAAAGAGAAATTAAC
AGGTCCTGAGAAATGTAATTGTAAATTTATCTGGTGCTGTGAAGTAACTT
GTGAACAATGCATTGTAACGAGGGAATACAGTAAATGTAGATAACATGTA
GAGAAACAGCGTTTATCTACGCCATCACGTCAGCCGGTGCCACATATGCG
TTAACTGAAAACTGCGCTAAAGGTCTAATTAAAGATTGCTCGTGTCGTCA
AGGCAACAGTATTCCTCAACCCAAACTCCTTAATCCACATTTACCTCCAA
AGCAACAAGAACTTATTTACGAAGGTTGTCATGACAATATTCAATATGGC
TACCAGCGTGGTAAAGCGTTCGTAGATGCAACAGAAGGAAGTCGTGATTT
TCATGCCTTTGTTAATCTTCACAACAACGAGGCTGGAAGACAGGAGCCTT
GGTCAAATTCAAGTCAACAACATACCACAACATCTTCTCATCAATTCGTA
CAGATTAACACGTCAGCAAAAACTCATCATAGAAACCACACCCAAATTAT
TGGAATCAGTCAGTAGAGGTGCTTCTTTGGCTACACAAGAATGTCGACGA
CAATTTCAATATAGAAAATGGAATTGCCCAATACATACCTCACAGTCAGT
GTTTGGAAGGATATTGAAAAAAGATGATGCTTTACCTTTCAAGAGGGAAA
TTATCAATTTTGATTGGATGTTGCTGTTTGTTTCAGATGATCGAAAGCTA
TTGGTGGCTGTTATCGACTCTATGGTTATTCAGTGTAAATGTCACGGAGT
ATCTGGGAATTGTAATGTCAAGACATGCCGCAAAGCATTACCCAAATTCT
CAGAGGTCGGCAAGCGCCTTATCACACAGTATGATACAGCTGCTAAAGTT
CAAGCGGCCCAAATATTGAGCACGCGGCGTATTGGAAAATCAGCTCGAGT
ATTAGGTGACGAAATTAGCATACCACGTTCGAAAAGTGATATTTTTCGAC
AGCCACAGAAACAAGATTTAATTTTTATAGAAGATTCACCTAATTTTTGT
GTTAAGAATGTAGAACATGGTTCAATGGGGACTCAAGGACGATATTGTAA
TTCTTCATTACGTGCTAAAGGAACTCAAGGTTGCGATGTCTTGTGTTGTG
GCAGACAGTTTGTAAAAGAGAAATTAACAGGTCCTGAGAAATGTAATTGT
AAATTTATCTGGTGCTGTGAAGTAACTTGTGAACAATGCATTGTAACGAG
GGAATACAGTAAATGTAGATAACATGTAGAGAAACAGCGTTTATCTACGC
CATCACGTCAGCCGGTGCCACATATGCGTTAACTGAAAACTGCGCTAAAG
GTCTAATTAAAGATTGCTCGTGTCGTCAAGGCAACAGTATTCCTCAACCC
AAACTCCTTAATCCACATTTACCTCCAAAGCAACAAGAACTTATTTACGA
AGGTTGTCATGACAATATTCAATATGGCTACCAGCGTGGTAAAGCGTTCG
TAGATGCAACAGAAGGAAGTCGTGATTTTCATGCCTTTGTTAATCTTCAC
AACAACGAGGCTGGAAGACAGGAGCCTTGGTCAAATTCAAGTCAACAACA
TACCACAACATCTTCTCATCAATTCGTACAGATTAACACGTCAGCAAAAA
CTCATCATAGAAACCACACCCAAATTATTGGAATCAGTCAGTAGAGGTGC
TTCTTTGGCTACACAAGAATGTCGACGACAATTTCAATATAGAAAATGGA
ATTGCCCAATACATACCTCACAGTCAGTGTTTGGAAGGATATTGAAAAAA
GATGATGCTTTACCTTTCAAGAGGGAAATTATCAATTTTGATTGGATGTT
GCTGTTTGTTTCAGATGATCGAAAGCTATTGGTGGCTGTTATCGACTCTA
TGGTTATTCAGTGTAAATGTCACGGAGTATCTGGGAATTGTAATGTCAAG
ACATGCCGCAAAGCATTACCCAAATTCTCAGAGGTCGGCAAGCGCCTTAT
CACACAGTATGATACAGCTGCTAAAGTTCAAGCGGCCCAAATATTGAGCA
CGCGGCGTATTGGAAAATCAGCTCGAGTATTAGGTGACGAAATTAGCATA
CCACGTTCGAAAAGTGATATTTTTCGACAGCCACAGAAACAAGATTTAAT
TTTTATAGAAGATTCACCTAATTTTTGTGTTAAGAATGTAGAACATGGTT
CAATGGGGACTCAAGGACGATATTGTAATTCTTCATTACGTGCTAAAGGA
ACTCAAGGTTGCGATGTCTTGTGTTGTGGCAGACAGTTTGTAAAAGAGAA
ATTAACAGGTCCTGAGAAATGTAATTGTAAATTTATCTGGTGCTGTGAAG
TAACTTGTGAACAATGCATTGTAACGAGGGAATACAGTAAATGTAGATAA
CATGTAGAGAAACAGCGTTTATCTACGCCATCACGTCAGCCGGTGCCACA
TATGCGTTAACTGAAAACTGCGCTAAAGGTCTAATTAAAGATTGCTCGTG
TCGTCAAGGCAACAGTATTCCTCAACCCAAACTCCTTAATCCACATTTAC
CTCCAAAGCAACAAGAACTTATTTACGAAGGTTGTCATGACAATATTCAA
TATGGCTACCAGCGTGGTAAAGCGTTCGTAGATGCAACAGAAGGAAGTCG
TGATTTTCATGCCTTTGTTAATCTTCACAACAACGAGGCTGGAAGACAGG
AGCCTTGGTCAAATTCAAGTCAACAACATACCACAACATCTTCTCATCAA
TTCGTACAGATTAACACGTCAGCAAAAACTCATCATAGAAACCACACCCA
AATTATTGGAATCAGTCAGTAGAGGTGCTTCTTTGGCTACACAAGAATGT
CGACGACAATTTCAATATAGAAAATGGAATTGCCCAATACATACCTCACA
GTCAGTGTTTGGAAGGATATTGAAAAAAGATGATGCTTTACCTTTCAAGA
GGGAAATTATCAATTTTGATTGGATGTTGCTGTTTGTTTCAGATGATCGA
AAGCTATTGGTG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00027371-exon-sc0000619-1575043694:184305..184550 | TCONS_00027371-exon-sc0000619-1575043694:184305..184550 | Clytia hemisphaerica | exon |
| TCONS_00027371-exon-sc0000619-1575043694:179692..179921 | TCONS_00027371-exon-sc0000619-1575043694:179692..179921 | Clytia hemisphaerica | exon |
| TCONS_00027371-exon-sc0000619-1575043694:177735..178033 | TCONS_00027371-exon-sc0000619-1575043694:177735..178033 | Clytia hemisphaerica | exon |
| TCONS_00027371-exon-sc0000619-1575043694:176576..177355 | TCONS_00027371-exon-sc0000619-1575043694:176576..177355 | Clytia hemisphaerica | exon |
| TCONS_00027371-exon-sc0000619-1510915933:184305..184550 | TCONS_00027371-exon-sc0000619-1510915933:184305..184550 | Clytia hemisphaerica | exon |
| TCONS_00027371-exon-sc0000619-1510915933:179692..179921 | TCONS_00027371-exon-sc0000619-1510915933:179692..179921 | Clytia hemisphaerica | exon |
| TCONS_00027371-exon-sc0000619-1510915933:177735..178033 | TCONS_00027371-exon-sc0000619-1510915933:177735..178033 | Clytia hemisphaerica | exon |
| TCONS_00027371-exon-sc0000619-1510915933:176576..177355 | TCONS_00027371-exon-sc0000619-1510915933:176576..177355 | Clytia hemisphaerica | exon |
| TCONS_00027371-exon-sc0000619-1491911889:184305..184550 | TCONS_00027371-exon-sc0000619-1491911889:184305..184550 | Clytia hemisphaerica | exon |
| TCONS_00027371-exon-sc0000619-1491911889:179692..179921 | TCONS_00027371-exon-sc0000619-1491911889:179692..179921 | Clytia hemisphaerica | exon |
| TCONS_00027371-exon-sc0000619-1491911889:177735..178033 | TCONS_00027371-exon-sc0000619-1491911889:177735..178033 | Clytia hemisphaerica | exon |
| TCONS_00027371-exon-sc0000619-1491911889:176576..177355 | TCONS_00027371-exon-sc0000619-1491911889:176576..177355 | Clytia hemisphaerica | exon |
The following polypeptide feature(s) derives from this transcript:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000619 | supercontig | sc0000619:176576..184550 - |
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0005102 | receptor binding |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0007275 | multicellular organism development |
| GO:0016055 | Wnt signaling pathway |
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0005576 | extracellular region |
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
| Category |
Term Accession |
Term Name |
| biological_process |
GO:0007275 |
multicellular organism development |
| biological_process |
GO:0016055 |
Wnt signaling pathway |
| cellular_component |
GO:0005576 |
extracellular region |
| molecular_function |
GO:0005102 |
receptor binding |
Blast
BLAST of TCONS_00027371 vs. Swiss-Prot (Human)
Match: WNT4 (Protein Wnt-4 OS=Homo sapiens GN=WNT4 PE=1 SV=4) HSP 1 Score: 252.677 bits (644), Expect = 3.198e-78 Identity = 138/362 (38.12%), Postives = 209/362 (57.73%), Query Frame = 2
Query: 218 LFQMIESYWWSLGQIQ-VNNIPQHLLINSYR-LTRQQKLIIETTPKLLESVSRGASLATQECRRQFQYRKWNCPIHTSQSVFGRILKKACRETAFIYAITSAGATYALTENCAKGLIKDCSCRQGNSIPQPKLLNPHLPPKQQELIYEGCHDNIQYGYQRGKAFVDATE---GSRDFHAFVNLHNNEAGRQAVIDSMVIQCKCHGVSGNCNVKTCRKALPKFSEVGKRLITQYDTAAKVQAAQILSTRRIGKSARVLGDEISIPRSKSDIFRQPQKQDLIFIEDSPNFCVKNVEHGSMGTQGRYCNSSLRAKGTQGCDVLCCGRQFVKEKLTGPEKCNCKFIWCCEVTCEQCIVTREYSKCR 1288
+F S W L ++ V +I + + L ++Q + + ++++SV RGA LA +EC+ QF+ R+WNC S VFG+++ + RE AF+YAI+SAG +A+T C+ G ++ C C + P Q + GC DNI YG ++FVD E G+ A +NLHNNEAGR+A++ M ++CKCHGVSG+C VKTC +A+P F +VG L ++D A +V+ RR+G S+R L +PR+ F+ +DL+++E SP+FC +++ G +GT+GR CN + +K GC++LCCGR F ++ E+C+CKF WCC V C QC E CR
Sbjct: 17 VFSAAASNWLYLAKLSSVGSISEEETCEKLKGLIQRQVQMCKRNLEVMDSVRRGAQLAIEECQYQFRNRRWNCSTLDSLPVFGKVVTQGTREAAFVYAISSAGVAFAVTRACSSGELEKCGCDRTVHGVSP-----------QGFQWSGCSDNIAYGVAFSQSFVDVRERSKGASSSRALMNLHNNEAGRKAILTHMRVECKCHGVSGSCEVKTCWRAVPPFRQVGHALKEKFDGATEVEP------RRVG-SSRAL-----VPRNAQ--FKPHTDEDLVYLEPSPDFCEQDMRSGVLGTRGRTCNKT--SKAIDGCELLCCGRGFHTAQVELAERCSCKFHWCCFVKCRQCQRLVELHTCR 351
The following BLAST results are available for this feature:
|
