TCONS_00027369 (transcript) - C. hemisphaerica

Overview
NameTCONS_00027369
Unique NameTCONS_00027369
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1433

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00027369 ID=TCONS_00027369|Name=TCONS_00027369|organism=Clytia hemisphaerica|type=transcript|length=1433bp
gagaaaatatttgtttctttgAGTTATGAATATTAGAATTTCAACATTCG
TGCCCCGAGGTTCATGGTCCGAAAACGTGAATTTTGTTGATACTGTAAAG
TTACAAAACCAGGCCTGGCAGTGAAACATCGACGAAATGGCTGCAAGAAT
TTTGAATTCACTTGGTGCTGTTGGTGTTGGATTGGCAGTTACTGGAGGGA
TCATAAATAGTGCACTATATAACGTTGATGGTGGCCATCGAGCTGTCATA
TTTGATAGATTTCGGGGAGTCATTCCAGATGTATCTGGAGAAGGTACACA
TTTCTTGATACCTTGGGTTCAAAGGCCCATTATATTTGATATTCGCAGCA
GACCACGAAATGTTGCTGTCATCACTGGTAGTAAAGATCTTCAAAATGTT
AACATCACACTAAGGATATTGTTCAGACCCATTGCTTCTGAACTACCCAA
GATGTACATGAGCCTTGGAGAGGATTACGATGAGCGTGTCCTCCCCTCTA
TCACCACTGAAGTTTTAAAAGCTGTTGTTGCCCAATATGACGCTAGTGAG
TTGATCACTCAGAGAGATATGGTTTCTCATTCAGTACAAGAGGCACTAGT
TGAGAGAGCTGGCTCATTTGGAATCGAATTAGATGATATTTCTTTGACCC
ACTTGACTTTTGGACGTGAATTTACTGAAGCTGTTGAGTTGAAACAAGTT
GCTCAACAGGAAGCTGAACGTGCCAGATTTTTAGTCGAAAGGGCTGAACA
ACAAAAGAAAGCAGCTATTGTGTCGGCAGAAGGAGATGCCATTGGTGCAC
AATTATTATCAGATGCTTTcaaaaaagctggtaacagtTTGATCGAGCTT
CGTAAAATTGAAGCAGGTGAAGAAATTGCACAGAACATGGCTGGTAACAA
AAATGTTATTTATCTCCCAGAAGGACAAGGTGTTTTGATGAATATGCCAT
CGCACTAAGAAATGGATTCAATTTAATCTCTTGTTTGAACCACAAGAAAA
CATTCAGCCTAGATCCACCGAAAACCTCATTCATTCAAGCAATTACAGAG
AACATAACATTCTATGCATTTGAAAACTGTTCTTTAATAAATATGACATG
CTGTCTGAGAAGGATAatggaaaatatgtttttaaacttttacatATAAA
ACAGAAATACACAGAGAAGATTTATAGTCTTTTAGAACCCCATTAACTTT
AACTCTTGAGTCAAACATTAGAAGCGTATCCTATATTATCTATATGCCCC
TGGAATTGTCCTAAATTCTCGACTCTCAAGGTTTCTCTTTTAAAATTGAA
TCATTTAAAAAATCTTCTCTTGAAAGATTCAGatgtttattttataaaat
agtattcttttcttataattttttattgctAGCTATCTGTAAAgtttaaa
agaaatataaatGTCACTGCCTAATGGTTTTTT
Run BLAST on NCBI

protein sequence of TCONS_00027369-protein

>TCONS_00027369-protein ID=TCONS_00027369-protein|Name=TCONS_00027369-protein|organism=Clytia hemisphaerica|type=polypeptide|length=273bp
MAARILNSLGAVGVGLAVTGGIINSALYNVDGGHRAVIFDRFRGVIPDVS
GEGTHFLIPWVQRPIIFDIRSRPRNVAVITGSKDLQNVNITLRILFRPIA
SELPKMYMSLGEDYDERVLPSITTEVLKAVVAQYDASELITQRDMVSHSV
QEALVERAGSFGIELDDISLTHLTFGREFTEAVELKQVAQQEAERARFLV
ERAEQQKKAAIVSAEGDAIGAQLLSDAFKKAGNSLIELRKIEAGEEIAQN
MAGNKNVIYLPEGQGVLMNMPSH
Run BLAST on NCBI

transcript from alignment at sc0000619:144240..155903-

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00027369 ID=TCONS_00027369|Name=TCONS_00027369|organism=Clytia hemisphaerica|type=transcript|length=11664bp|location=Sequence derived from alignment at sc0000619:144240..155903- (Clytia hemisphaerica)
GAGAAAATATTTGTTTCTTTGAGTTATGAATATTAGAATTTCAACATTCG
TGCCCCGAGGTTCATGGTCCGAAAACGTGAATTTTGTTGATACTGTAAAG
TTACAAAACCAGGCCTGGCAGTGAAACATCGACGAAATGGCTGCAAGAAT
TTTGAATTCACTTGGTGCTGTTGGTGTTGGATTGGCAGTTACTGGAGGGA
TCATAAATAGTGCACTATATAACGGTAATTTCCTTATTTTCTCAAATATT
CTTTGATCACTTCTCATTAAACATTACAGTGTTGCTGCTGCATAAAAAAA
GGGAGTCAGGGTTCCCCAAGAGCAGTTTCGGCAGTTTGCATGAAGTGATG
AAGTACAGTCAGGACTTCCTTTCACTTCCTCAATATTACGCCCACAGTCA
GTTAGGGCTTCCTTGGTCTTTTTCTGACATTAAGTTCTTTTTGGGCGAGG
ACAAGTAGGACCTCCCGGTGCTCCGAAAATGTCCGGAGCAGTTTTTTTCG
TGCTCTGGAACACTGGAAGATTCCGAAGCACGTCCGGTGTTCCAGAGCAA
GATATCTGCAATATAATTACGATACCGCTCGCTGTGCTAATCATGGGAAA
ACTAACTGCACACATGCATATTAAAAAAAAATCAGCCGACTCATTCATGG
AAGTGAAACCTCACGTTTTTTTATTCTTTCAATATTTCGACCACCAGTGA
TGCTTTTGAATGTATATAATGTGTTTTTTTAGAACGTGTTAAAAATCACT
TGCTCCAGAAGCACTGGAAGAGCTCCAGAACTTTCCAAAGAGGAAAATAG
TGTTTTTTTTAGTTGCTCTGGAAGTTTCCAGAGTGCCGGGAGGGTCTTGG
ACGAGTTCTGGACAATAAAAAGTTATGGTTTGACAGTATTTTACAGCCAC
TAGAAAGTAAAAACACAAAATAGTTTAGAAACAAGTACATAACCAGACGG
TGTCAATCGAACGAATCGAACGCCGAATCAATCGAATGCAATTGAACGCA
ATCGAATAATTGCAATTCGATTGTCGAATGTAATTNNATTTGCTGTTCGA
TTGCTTCGATTACGTTCGATTGTATTCGATTACGTTCGATTGTATTCGAT
TACGTTCGATTGTATTCGATTACGTTCGATTGTATTCGATCACGTTCGAT
TGTATTCGATTGTACAGTATTGGATTTTATTAGCTTTGGTATGGTACTTC
AAGCACTCGGCCGCCCACACTAAAGAGCTCTACTCTAACAGAGTGATCCA
ATTTAATTTAATCGCAATCAAACTCATCAAACATAATCGTAATCGAACGA
AATCGAAGATTATTCCAATGTAATTGACAATCAATCGCACCAATCGAACA
TAGTCAACTATCAATCGAACCAATCTAACCTTACTCGAACGCAATCGAAC
ACAATCGAATATTACCCAGGAATCGGCCGTNTAACCTTACTCGAACGCAA
TCGAACACAATCGAATATTACCCAGGAATCGGCCGTTCGATTGAGATTCG
ATTACGTTCGACAATCGAATCGCAATTATTCAATTACGTTCGATTGGTTC
GATTGCGATTTTTGTTCGAAGTTGTTCGATTGACACCGTCTGGACATAAA
GGCAAAATTGGCAAAAGCTTAAATACAAAATTACTGTTGATAGGGTGCGC
ACTCGTTGGGATTTTTTGCGGGGAACGAGGGAGAATTTACCAAAATGAAC
TTCAATGCATTAGTAGTTACCTTTAAATAGTCCAAATTTGTTCATTCTTT
TATTTAAATCAATCAGGAATTATCAAGAAAACAAGTAAAAAAACTCCATC
CAGGTATCTATTTTCTTTCCAAAGATATTGATGTTTTTTGACGTCAAGGT
GAAAACACGACTTAGCGCTGACCACTGCACCAGAAAATTCTTGACGCACA
TGGAAACAAATGGCTGTTGCTATTGAGCTGGTTCATCTTTTCAATTGCGG
TCTTTTTTATAAACACAGAGTAAGATTAGGCTACAATCTATCACATTGCG
TTTTATTTAAAAATCTACAGGCAAAACTTCCCACACCCCGCCACGCTGAA
GGCTAGATTTCATCCGCCATTTTTGGTGTGATTGTGGTGCTTCCAAAAAT
TATTTCTTGCTGGCGTGGTGTAAGGAGGCGATTCTTTGAAAAGGTGATTT
TTTGTGTTGAAAATGGAATAACTTTGGGAATACTTAACCAATTATAATAA
ATGACCCCTCATTTTTCTCACAAAGGTAAGGACTTTCAAATAAAATTAGT
TTGGTTTTTAAAAATTGAGAGGAAAAATTTTGGCCTGTCCACCCTATTGT
TGACAAAATCACAAGAATACAGGTTAAATGCAGAAAATAGTAAATATCTA
ACTGGAAATTAAAGAAGAAACTAACTAAAATATGAAATACTTACAAAATT
CATCACATAATATCTCTACAAAATATATCTCGCCACAAACAAATGCACGA
TATGCAAACGATCCAAAATGAATTTCACGACTGTTCATAGTGAAATAACA
AACCTGCAAAAACAGGAATCAACACTCTAAATTTTGCTTAACGCTCAGAG
CGCGCCGATGAGCAATTTTTTCCTCAATAATTTTTCCTATCGGTCATTCA
GTGATTCAGGGGTATTGGGTCATTACCAGTTAGGGTTAGGGTTTGAGCTC
GAGAGTCATAACAAAGGAGCACTTGTACCTAGTGACTAAACCTAGGGCTG
CATAGCAGCCCTTTTAGGTACACCNACTCGTACCTAGTGACTAAACCTAG
GGCTGCGTAGCAGCCCTTTTAGGTACACTGATAGGGCTGGATACTTCACC
TATATTATAGAGATTTGCCAGTTCTGTTTAATTTGTTACGAATTGCGGAA
GTTTAAAAAGTTCAAAAATAGCACAGTAATAAAAAGTGTTAAAAATAGTA
CACTAATAGTGGAAGCACAATTAGGAGGGTCACATGAGAAAGGTGTTCAA
AAGCTGAAGGAGAGCACATACTAGAATTGAGGTTAACAAGAGTCCAGCTG
GTCGCTAGAGGATAATGTAGCAAAAATAAACATAAGTATGAGCATAGACT
CAGTGGAAGAACAGGCGCAGATTTAAGTGTACGTACTAGAATATTTAGCT
ATAAATAGAATTTTTGAATTCTTTTTCAGTTTTCAAATTTGCAGTTCTAA
TTGGTAATTTGTTCCATATTTTGATGGTAGTTGGAAAGAATGAGTTTGAA
TAGCATTTAATCCTGCCCTGAATGGGCTGATATTTCACATTTTTACAACG
CTGGCTAGCTGGGTGGATGCTGCTGTCAATGGATTTGTTTCCTGACAAAA
TATCAAATAACATTTTCAATTTCGATTTGGATCTCCTTGTTTCCAGTGTT
TCGAGTTTAAGTGATTTTCTCGGTAAGGGATTGGTTATCAGTTTGATCCC
ATACAGTGTTGGCATATTCCACCATTGGTCTGATAAAAGTTTTATAACAC
TTCAGACGTGTTTCTTTGTCTGCCATTGATAGGTTCCTCTGAAAGAATAT
TCGGGTGTCATTTGCTTTTGAGGTGGCAAGATCAATGTGATTCTTCCAAG
AGATATTATTCGAGATTACGACACCGAGATATTTAGCTTTATTAACAGTT
TTAAGCTGTTGACCATGGATTTCATAGGTTTTATCATGAATTTTTTGTTT
GTTGGTGACTCTAAGGTTAACCCTTTAACTGCCGTTCGTACTTTTTAAGG
TTCAACCTATTTGCCACGGGAAAAAAAGAAGGTTCAACCTATTTGCCAGA
TGTCGGCATATGCCGACATGGGCAAAAGGTAGCGATTTTGACTTCATTTT
CTGAATAATATATTTAAGTATCAGCCAAGGACTATAATTTTGAGTTGAAC
ATTGTTGTATAGTTATTTTTCAACATAAGCTTTTAACTATTATCTTTTTT
CATTTCAAACCATCTAATACAAAATCTTTGTAGAAGTGTTAAATTTTGCG
GCAAAGGAATGGAAAGTGCCCATGTCGGCATATGCTGACATCAGCAAAGA
AATCGAAAGTACCCATGTCGGCATGCCGACATCGGCAGTTAAAGGGTTAA
AGCATTTGTCTGGGTGAAACTCCATGGCCCATTTGTTTTCCCATTTTACC
AATTCATCTAGGTCTTTTTGAAGCTTTTTGTAGTCTTCCTGTGTGTGTAT
TGAGCGGTAAAGATATGCATCATCGGCAAACAGCAGTGGCCCAAGGACAG
TTCCTTGGGGGACACCTAAAATGACGTTTGAGTTTTTGGAGGATTTTCCA
CGAACAACAACACATTGGGTGCAATGAGATAGAAAGTCTGTAACCCAAGT
TAGGACGTTGTCATGTACCGTCAACTGCTCCAACTTGATATCTGGCCTGT
ATTTTCACTTACTGTTAAATCTCTTGGACAACAAATTTGTTTTGATAACT
CCACCAAGTTTATCAATCATACTTTCTGTCATAACATGTCGCGATAACTT
TCACTGATAGCACGCCCTTTTTAACTTTTGTTTTCATTCAAAATGACTGG
ACGCCGAATGGAGAATTAGAGAACGCCTGCCGCCTAACCGCCTACCGCCC
AATGGGATTAACAAATAGCGAGTGTGTAACTTGCCGTGCGAGTGACGTCA
AACGCTCCATCGTTTTGCCACTACTTTAGCCTTCTTCGTTCCGGACACTC
GCGCCTGTTCCACTACAAATTGTTTTCTTATTTCAATTTAAAAGCCTACT
CGTCGCAAAAGAGCATGGCTGGAACCCCCCCTGGCCTGAGGTGGGGGGGC
TAAAAGGTCAAGCGAATAAATTTTCAGAAACAAAATCATACATCAAGGAT
ATCTAGAAAAGACTTTATGGCCGGCGACTTTGAACCTTTGAGGTCGGCGA
AAATCGCCGGTCGCCGGCCTCAAACAAACCCCATGCTGTAAGACAGCTGT
TCTCCTCGAGGTGGTTGATGCTGTGGCTATGAACGATGTGTTCTAAAACT
TTGCAGGTGACAGACATCAGGCTAATCGGTCGATAATTTTCTGCTTTGGA
CCTATTTTTGTTTCCTCCTTTGAAGATCGGCCTTCCTTTAGAATACAGGC
TCCGATTCCGTCAGGACCACTAGCTTTAAAGGTATTCAATTCTTTAAGTA
GTTTTATGACTCCGTTTTTGGTAACAATGATATCATTGATCTTTTTTCCT
TTAGGGCCTAACAGTGTTGTGGTTGTACCATCATCTTCTGTGAAGACACT
TGTGAATTGGTTATAAAGAATCTCTGCTAGTTCTTCCTCTTTGGTATGAA
TTTCGTTGATTTCGCCCAAGAGAGGTGATAAACCACAATTGTCTGTTCTT
TTGGATTTCACAAATGAGAAGAATTTCTTGCTATTTTTCTTATAATTGCA
AATGTTTTCTTTGTAGGTGTTGTATACGATTTGGCAGGTCTTTCTTGCAA
ATTTTGCTGCCTCCTGGTATCTTTTCCAGTCTCGATCAAGTTTAGTTCTT
TTGTATACTCGGTATCTTCTTGACTTTTTTTCAAACTGCCTTTTTGCATA
CTACGTTAAAACCAGGGTTGATTGAAACGCTGAGATGTGGTCTTTGTTGG
TACAAACATGTTTGTCCTGCGCATTCGAGATAATTTGCTTGAACGTTTCC
CAACATTTATCAATGTCTGTTTTTAGTGTTTGTTGTGCAGAAGTTTTGTA
TACCTTCAGTGATATCCTTTTGAAGGCCTTCTATATTCACCCGATGCCAG
ACATGGATCTTGCTTTGGATGGGTTTCAATTTTTGGGGATGGCAGAAAAC
ATCAGCAATAACGGCTGTCTCATGGTCACCAAATCCTTCATACGGCTCAC
ATTTGTTAGTAAGACCACGGTCGGTTTGTTAGAATTAGGTTGAGTATGGC
TTTTTTCCAAGTTGTGAAGTCGACAAGCTGATTGAGGTTTAGAACATCGA
AGACTTCAAGGAAATCTTTGTTTAATTGTTTTGAGTATTGGCTTCTGACA
ATAGTGTTAGATTCCCAGTCTATGTCTGGAGGGTTGAAGTCTCCACAAAT
CCAGTGTGGGTTCAGTTGATACTTTTTCACAGTGTAGGAAATATCTTTAA
TGAACTGAGTGTTGTAAGAAGCATCACTTGATGGGGGTTTGTAGCAAGCT
GTGAGAATTACTGGCTTCTCAAAGGATTCTATTTTAATTGATGCGATTTT
AGATTTTTGCTGCGGGAGTTCTTGCACTAGGAGGTTATCTTTGTGGATGA
AGATTACTCCTCCTTTTCCATCTATGTGATCCTTTCGAATGGCAAGGTAA
TGCTTTGGAAGGAATTGAGAGTTACTAATGTTACAAGTCAAGTGAGTTTC
TGAGCCAATGAGAACGTCTATGTCGTTTTCATGTAAATAGTTTCCAAGTA
GAAGTTTTTTGTTCCAGATACTTTGGAGATTGCACACAATGACAAGTAGA
TGGTTGACTTTCTTTTTCTCGGGTGTGATATCATTGGTAGAGGTTGAGCT
GCAGGACGAGATCGAGGTATCGAATAGACTATAATGAGATGTTTAATAAA
GCACAACCTGGACAAAGCCATTCTAAACTCTCCTCTTGGATGTGGCATTG
ATAGATTTAATCATTCATGTTGGTATATTTAAGGTGAAACCACTGGTTAC
AGAGGTCACAAGCGATAGAAGCACCAGAAGATACTGCCTTTTGACATTCA
CCACAGGGATATTTCAACTTCTGGGATGGGCCGGGGTTGCGTTTGACAGT
ACCACTAATGATTGATAGCATCTGCTGTAATATGGCACTTGTTTTCGTCT
TGCATGGGTGGTATCGATTTTCCTGGAAAGTAATAGCGAAGGAAAACAGC
GAGATTTCATTTTTATAGAGGACTTTGCAGCAAAGCAATGAGTTTGCTTG
GTTCAAAGATATCTGACATTTGGTTAGTTGTCAGGATAACATAGCAATGA
GTAACAGTCGTGAGATAATCATTGTTGTAAAGATTAGTTGAGAAAAAGGT
AAATACGATAGAACAAGATCAGACACTTGGTCAGATTTCCTCGTCCAGTT
TGTCAGTTCCAAACCAGGGTGTCTTGATGTAGTGTATTTTATAATTTTTA
GTTTCTTTTCTTTTTAGTTCGCTGAAAAAGATGGTTCCACCCTAGGTTTC
CCAAGGCTTTGCCTTAGACTCAAATTCGGAGTAATTGGTGTTTTTTTAAG
TGATTGACAAGTGATTGACAGGTATAAAATCTCAGTCAGAAATGAAAAAC
TAAGTCTCAGAAAGCCAAAAGAAACAAGGTAAAGTGAAAGATAGGAAAGG
GAAAATAGGTTGTTGTGCTCTGAGCATTCAGCGAAATGTAACATACTTCC
TTGTCCACCATCTTTAATTTTGCAAATGAATCCAGCTAAATTACCGTTCA
CTTTTGATATTGCAGATATTGCACTGTGTCGCAGTTTTGATGCACTGCGT
TGCTGTATTTTGCTTTTTCGTTTGCAATATAGGCGCGCTGATTGGATCAA
AATTTTTGCGCCAAATTTCTCAGTGTTACTATGGAACGGGGTTTATTATT
CTTTTCTTAATCATGTTTCGCGCTGCTAAAAAAACGAAAATATTACAGTT
ATTCAACTGAAGAGAATCTTGTTGAAAACCTTCTGTCAGGTTCATTTCGT
ACGTTTTTTATCACACGGTGAACCCGTTTCCCCAATTTCCCAATAATTAA
AAATTGGAACCTTCCATGGGCGTGATTGGAAACAAATATTGGTATTTTTT
TCTGATTTTTTAGTCTGCATTTTCGTACAGTTGTTGCCATTTTTCTATTT
TCTTTCTTATTGCATTAGCCTTCATGTAGGTAGCCATTCAGCCTGTAGCT
GTTATAATAGAAATTGTAAAATTTTAATGTGTCAGTGTCAAAGGGTGTGT
TAACCCTTTCCGTGCCAAAATTTAATTTATGCTGTTTCACTTCCTTCCAA
CTTTGCTAAGCGTTTTTCTAAAAGGTTTTTAATAAGACCATTCAAGCTGA
TAGGTTTAAAAAACAGCAAGTCATGAATGAATCCTGCTTTTTTTTATCCT
TTGAAAAAGATTTTTACCAATTTTGAGCTAAATTGCTTTATTTTCCCTTC
TCTTTAAAAAACTGAAAGGACAACCATATATGTCAAATGGCGCAGAAAGG
GTTAAAGGGACATATTTTATTTTCTGCCTTTATTATAGATCATTTTCAAT
TCATCAGATATAATAGATGTTAAAAAGTTACAAGTTTATCACATGCTTTA
ATGTCACTACTCAAAATGATTACTCTTTTTAGTTGATGGTGGCCATCGAG
CTGTCATATTTGATAGATTTCGGGGAGTCATTCCAGATGTATCTGGAGAA
GGTACACATTTCTTGATACCTTGGGTTCAAAGGCCCATTATATTTGATAT
TCGCAGCAGACCACGAAATGTTGCTGTCATCACTGGTAGTAAAGGTAAAC
GTTTTAACAAAAATCTGTAATTCTCTCAGATTCTCTAGTTAAAATATTAC
AGTCTGTTTTTACCACAATTTTTAAAAGGCAGCCTTTATTATTAACTGTT
GTTGCTGTTGGAGGTCTATGAATAATTTGTAAGCTTGTGGTGACATCAGA
AGATTGATACATTTCTCCCATATTAACAAAAGCATGAACCCCAAATGAGA
CTTGCATGCTCAATCTTTTTTTTCAAAATCCTAATCCATCCTCAAAATTT
TCTAGAGGTACTTTACAAGCAATTATTACAGTATTTGAAGTTTTCTATGA
ATCTTTCAGATCTTCAAAATGTTAACATCACACTAAGGATATTGTTCAGA
CCCATTGCTTCTGAACTACCCAAGATGTACATGAGCCTTGGAGAGGATTA
CGATGAGCGTGTCCTCCCCTCTATCACCACTGAAGTTTTAAAAGCTGTTG
TTGTAAGTTGAAAATTTTAAAAATCTTTTAATTGGTTCTCTTTATAATAT
CTATATTCTCAAAATTTGTTTTCGTTTAGAGAAGCCTTTAAATGTTTAAA
ATTACAATGAGAAAGTTAATTTTATGGTCATTTAGATATAAATAGTTGAC
AGAATATCTTTGTAAAGACCATATACAACTCTTATGCTAATTATTGTCAT
ATCTTCATTACTATATATGTCTCTTGCTTACAGGCCCAATATGACGCTAG
TGAGTTGATCACTCAGAGAGATATGGTAAGTTTTTAGGGTATTTCCACTA
TGTGATACTAACTGTTATCTTTATAAAATAACAATTCCGACTTGCGACTC
AGCTGGACTCAGCTAAGTTATTATCCATGGATATATTTCTAATAAATGGG
GGTAATATGTTATGATGGTAATAAATATTGTCCAATTTTGAAAGTTACTT
TTCTTCTATTTAGGTTTCTCATTCAGTACAAGAGGCACTAGTTGAGAGAG
CTGGCTCATTTGGAATCGAATTAGATGATATTTCTTTGGTAATTTTTAAA
GCTCTTTTGACCGTACTCTTATTAAAATATGTAAATAATGAGTGGGTGAA
CCTGTATTTTTAAGATATTCAATGTCTGATTTTTCATTTTTGTTTACTGT
TTGGTCTTCCTATATTGAATATCATTGATATCCAAGAATGGATTGCTTTT
TTATTCACCTCTCTTATTTTTTTGCAACTAAAGAACTATCTAAATACACG
GACTCTGTTTTCAGTTTGCAACTTTTAACTCCCTACCCCAGGGTAGAAGA
GGGCACTACTTGTTTCCTGGATTTTTTCCCTTAAGTTTGACCCTATTGAC
AAACAAGAAGTATATTGATCTTTATATCCATTTCATTCCAATATTGTTTT
TAGACCCACTTGACTTTTGGACGTGAATTTACTGAAGCTGTTGAGTTGAA
ACAAGTTGGTAAGGACCTTCAGAAATTTGTTTACAATTTAATAATGAAAT
AAAGAATTTAAGTGTTATTATAGTTTTACTGTTTCTTTAATCCAATTTAT
TTACATTCTTTTTTCTATAGCTCAACAGGAAGCTGAACGTGCCAGATTTT
TAGTCGAAAGGGTAAGTTTTATTTACACTGACTGAAGTTTCTCGTTTGTA
CATTTTAAGGATTTCAAAGCTTCACTTTCGCACATAAAAGAAAGAGACAT
ACCGGGTGCCTCAGAAAAATCTTTGGACGTTTGGCGAGCCACTAAGGCCA
AGCAAAGTCTTTTTTGAACTCAAAACCATTTTTATTAGAAAGAGGATAGT
CTAACTTAAATTTTGCGGTACAACTTTTTAAGTTTGGTCAAGTAGTTGTC
AAGTTATAAGCTTTTGAAGTTAAAATTCACTTTTCGAAAAGTGTGAAAAA
CACGTAATAAAAGGGTATTAAATTAAGCATTTTTAAGCGTNNNNNNNNNN
NNNNNNNAACTGACTATTTACTAAAAACTGACTATGTTGTAAACGAAAAC
TGCTTTTAAAAGTATTTTAACAATTAATTATGTCGTAAAAGTCGTNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGTCCT
CTTTCTAATAAAAGTGGTTTTGAGTCTAAACAAGACTTTGTTCGGCCTCA
GTGGCTCGCCAAACGTCCAAAGTTTTTTCTGAGGCACCCGGTATATTTGC
TCCAATCCTCAAGAAAGGCACAGATACAAACCAGCATTTCTCTAGGTTAA
CTTGGCTCAACTAAGATTAGGAGCTATTCAGTTCAATTAATGTCACATGA
TAATTTTTCTTAAAGGCTGAACAACAAAAGAAAGCAGCTATTGTGTCGGC
AGAAGGAGATGCCATTGGTGCACAATTATTATCAGATGCTTTCAAAAAAG
CTGGTAACAGTTTGATCGAGCTTCGTAAAATTGAAGCAGGTGAAGAAATT
GCACAGAACATGGCTGGTAACAAAAATGTTATTTATCTCCCAGAAGGACA
AGGTGTTTTGATGAATATGCCATCGCACTAAGAAATGGATTCAATTTAAT
CTCTTGTTTGAACCACAAGAAAACATTCAGCCTAGATCCACCGAAAACCT
CATTCATTCAAGCAATTACAGAGAACATAACATTCTATGCATTTGAAAAC
TGTTCTTTAATAAATATGACATGCTGTCTGAGAAGGATAATGGAAAATAT
GTTTTTAAACTTTTACATATAAAACAGAAATACACAGAGAAGATTTATAG
TCTTTTAGAACCCCATTAACTTTAACTCTTGAGTCAAACATTAGAAGCGT
ATCCTATATTATCTATATGCCCCTGGAATTGTCCTAAATTCTCGACTCTC
AAGGTTTCTCTTTTAAAATTGAATCAGTANCGTATCTTTTATTAATTCTC
GACTCTCAAGGTTTCTCTTTTGAATATGAAACAGTTTAAAAAATCTTCTC
TTGAAAGATTCAGATGTTTATTTTATAAAATAGTATTCTTTTCTTATAAT
TTTTTATTGCTAGCTATCTGTAAAGTTTAAAAGAAATATAAATGTCACTG
CCTAATGGTTTTTT

Coding sequence (CDS) from alignment at sc0000619:144240..155903-

>TCONS_00027369 ID=TCONS_00027369|Name=TCONS_00027369|organism=Clytia hemisphaerica|type=CDS|length=6576bp|location=Sequence derived from alignment at sc0000619:144240..155903- (Clytia hemisphaerica)
GCTGAACAACAAAAGAAAGCAGCTATTGTGTCGGCAGAAGGAGATGCCAT
TGGTGCACAATTATTATCAGATGCTTTCAAAAAAGCTGGTAACAGTTTGA
TCGAGCTTCGTAAAATTGAAGCAGGTGAAGAAATTGCACAGAACATGGCT
GGTAACAAAAATGTTATTTATCTCCCAGAAGGACAAGGTGTTTTGATGAA
TATGCCATCGCACTAACTCAACAGGAAGCTGAACGTGCCAGATTTTTAGT
CGAAAGGACCCACTTGACTTTTGGACGTGAATTTACTGAAGCTGTTGAGT
TGAAACAAGTTGGTTTCTCATTCAGTACAAGAGGCACTAGTTGAGAGAGC
TGGCTCATTTGGAATCGAATTAGATGATATTTCTTTGGCCCAATATGACG
CTAGTGAGTTGATCACTCAGAGAGATATGATCTTCAAAATGTTAACATCA
CACTAAGGATATTGTTCAGACCCATTGCTTCTGAACTACCCAAGATGTAC
ATGAGCCTTGGAGAGGATTACGATGAGCGTGTCCTCCCCTCTATCACCAC
TGAAGTTTTAAAAGCTGTTGTTTTGATGGTGGCCATCGAGCTGTCATATT
TGATAGATTTCGGGGAGTCATTCCAGATGTATCTGGAGAAGGTACACATT
TCTTGATACCTTGGGTTCAAAGGCCCATTATATTTGATATTCGCAGCAGA
CCACGAAATGTTGCTGTCATCACTGGTAGTAAAGATGGCTGCAAGAATTT
TGAATTCACTTGGTGCTGTTGGTGTTGGATTGGCAGTTACTGGAGGGATC
ATAAATAGTGCACTATATAACGGCTGAACAACAAAAGAAAGCAGCTATTG
TGTCGGCAGAAGGAGATGCCATTGGTGCACAATTATTATCAGATGCTTTC
AAAAAAGCTGGTAACAGTTTGATCGAGCTTCGTAAAATTGAAGCAGGTGA
AGAAATTGCACAGAACATGGCTGGTAACAAAAATGTTATTTATCTCCCAG
AAGGACAAGGTGTTTTGATGAATATGCCATCGCACTAACTCAACAGGAAG
CTGAACGTGCCAGATTTTTAGTCGAAAGGACCCACTTGACTTTTGGACGT
GAATTTACTGAAGCTGTTGAGTTGAAACAAGTTGGTTTCTCATTCAGTAC
AAGAGGCACTAGTTGAGAGAGCTGGCTCATTTGGAATCGAATTAGATGAT
ATTTCTTTGGCCCAATATGACGCTAGTGAGTTGATCACTCAGAGAGATAT
GATCTTCAAAATGTTAACATCACACTAAGGATATTGTTCAGACCCATTGC
TTCTGAACTACCCAAGATGTACATGAGCCTTGGAGAGGATTACGATGAGC
GTGTCCTCCCCTCTATCACCACTGAAGTTTTAAAAGCTGTTGTTTTGATG
GTGGCCATCGAGCTGTCATATTTGATAGATTTCGGGGAGTCATTCCAGAT
GTATCTGGAGAAGGTACACATTTCTTGATACCTTGGGTTCAAAGGCCCAT
TATATTTGATATTCGCAGCAGACCACGAAATGTTGCTGTCATCACTGGTA
GTAAAGATGGCTGCAAGAATTTTGAATTCACTTGGTGCTGTTGGTGTTGG
ATTGGCAGTTACTGGAGGGATCATAAATAGTGCACTATATAACGGCTGAA
CAACAAAAGAAAGCAGCTATTGTGTCGGCAGAAGGAGATGCCATTGGTGC
ACAATTATTATCAGATGCTTTCAAAAAAGCTGGTAACAGTTTGATCGAGC
TTCGTAAAATTGAAGCAGGTGAAGAAATTGCACAGAACATGGCTGGTAAC
AAAAATGTTATTTATCTCCCAGAAGGACAAGGTGTTTTGATGAATATGCC
ATCGCACTAACTCAACAGGAAGCTGAACGTGCCAGATTTTTAGTCGAAAG
GACCCACTTGACTTTTGGACGTGAATTTACTGAAGCTGTTGAGTTGAAAC
AAGTTGGTTTCTCATTCAGTACAAGAGGCACTAGTTGAGAGAGCTGGCTC
ATTTGGAATCGAATTAGATGATATTTCTTTGGCCCAATATGACGCTAGTG
AGTTGATCACTCAGAGAGATATGATCTTCAAAATGTTAACATCACACTAA
GGATATTGTTCAGACCCATTGCTTCTGAACTACCCAAGATGTACATGAGC
CTTGGAGAGGATTACGATGAGCGTGTCCTCCCCTCTATCACCACTGAAGT
TTTAAAAGCTGTTGTTTTGATGGTGGCCATCGAGCTGTCATATTTGATAG
ATTTCGGGGAGTCATTCCAGATGTATCTGGAGAAGGTACACATTTCTTGA
TACCTTGGGTTCAAAGGCCCATTATATTTGATATTCGCAGCAGACCACGA
AATGTTGCTGTCATCACTGGTAGTAAAGATGGCTGCAAGAATTTTGAATT
CACTTGGTGCTGTTGGTGTTGGATTGGCAGTTACTGGAGGGATCATAAAT
AGTGCACTATATAACGGCTGAACAACAAAAGAAAGCAGCTATTGTGTCGG
CAGAAGGAGATGCCATTGGTGCACAATTATTATCAGATGCTTTCAAAAAA
GCTGGTAACAGTTTGATCGAGCTTCGTAAAATTGAAGCAGGTGAAGAAAT
TGCACAGAACATGGCTGGTAACAAAAATGTTATTTATCTCCCAGAAGGAC
AAGGTGTTTTGATGAATATGCCATCGCACTAACTCAACAGGAAGCTGAAC
GTGCCAGATTTTTAGTCGAAAGGACCCACTTGACTTTTGGACGTGAATTT
ACTGAAGCTGTTGAGTTGAAACAAGTTGGTTTCTCATTCAGTACAAGAGG
CACTAGTTGAGAGAGCTGGCTCATTTGGAATCGAATTAGATGATATTTCT
TTGGCCCAATATGACGCTAGTGAGTTGATCACTCAGAGAGATATGATCTT
CAAAATGTTAACATCACACTAAGGATATTGTTCAGACCCATTGCTTCTGA
ACTACCCAAGATGTACATGAGCCTTGGAGAGGATTACGATGAGCGTGTCC
TCCCCTCTATCACCACTGAAGTTTTAAAAGCTGTTGTTTTGATGGTGGCC
ATCGAGCTGTCATATTTGATAGATTTCGGGGAGTCATTCCAGATGTATCT
GGAGAAGGTACACATTTCTTGATACCTTGGGTTCAAAGGCCCATTATATT
TGATATTCGCAGCAGACCACGAAATGTTGCTGTCATCACTGGTAGTAAAG
ATGGCTGCAAGAATTTTGAATTCACTTGGTGCTGTTGGTGTTGGATTGGC
AGTTACTGGAGGGATCATAAATAGTGCACTATATAACGGCTGAACAACAA
AAGAAAGCAGCTATTGTGTCGGCAGAAGGAGATGCCATTGGTGCACAATT
ATTATCAGATGCTTTCAAAAAAGCTGGTAACAGTTTGATCGAGCTTCGTA
AAATTGAAGCAGGTGAAGAAATTGCACAGAACATGGCTGGTAACAAAAAT
GTTATTTATCTCCCAGAAGGACAAGGTGTTTTGATGAATATGCCATCGCA
CTAACTCAACAGGAAGCTGAACGTGCCAGATTTTTAGTCGAAAGGACCCA
CTTGACTTTTGGACGTGAATTTACTGAAGCTGTTGAGTTGAAACAAGTTG
GTTTCTCATTCAGTACAAGAGGCACTAGTTGAGAGAGCTGGCTCATTTGG
AATCGAATTAGATGATATTTCTTTGGCCCAATATGACGCTAGTGAGTTGA
TCACTCAGAGAGATATGATCTTCAAAATGTTAACATCACACTAAGGATAT
TGTTCAGACCCATTGCTTCTGAACTACCCAAGATGTACATGAGCCTTGGA
GAGGATTACGATGAGCGTGTCCTCCCCTCTATCACCACTGAAGTTTTAAA
AGCTGTTGTTTTGATGGTGGCCATCGAGCTGTCATATTTGATAGATTTCG
GGGAGTCATTCCAGATGTATCTGGAGAAGGTACACATTTCTTGATACCTT
GGGTTCAAAGGCCCATTATATTTGATATTCGCAGCAGACCACGAAATGTT
GCTGTCATCACTGGTAGTAAAGATGGCTGCAAGAATTTTGAATTCACTTG
GTGCTGTTGGTGTTGGATTGGCAGTTACTGGAGGGATCATAAATAGTGCA
CTATATAACGGCTGAACAACAAAAGAAAGCAGCTATTGTGTCGGCAGAAG
GAGATGCCATTGGTGCACAATTATTATCAGATGCTTTCAAAAAAGCTGGT
AACAGTTTGATCGAGCTTCGTAAAATTGAAGCAGGTGAAGAAATTGCACA
GAACATGGCTGGTAACAAAAATGTTATTTATCTCCCAGAAGGACAAGGTG
TTTTGATGAATATGCCATCGCACTAACTCAACAGGAAGCTGAACGTGCCA
GATTTTTAGTCGAAAGGACCCACTTGACTTTTGGACGTGAATTTACTGAA
GCTGTTGAGTTGAAACAAGTTGGTTTCTCATTCAGTACAAGAGGCACTAG
TTGAGAGAGCTGGCTCATTTGGAATCGAATTAGATGATATTTCTTTGGCC
CAATATGACGCTAGTGAGTTGATCACTCAGAGAGATATGATCTTCAAAAT
GTTAACATCACACTAAGGATATTGTTCAGACCCATTGCTTCTGAACTACC
CAAGATGTACATGAGCCTTGGAGAGGATTACGATGAGCGTGTCCTCCCCT
CTATCACCACTGAAGTTTTAAAAGCTGTTGTTTTGATGGTGGCCATCGAG
CTGTCATATTTGATAGATTTCGGGGAGTCATTCCAGATGTATCTGGAGAA
GGTACACATTTCTTGATACCTTGGGTTCAAAGGCCCATTATATTTGATAT
TCGCAGCAGACCACGAAATGTTGCTGTCATCACTGGTAGTAAAGATGGCT
GCAAGAATTTTGAATTCACTTGGTGCTGTTGGTGTTGGATTGGCAGTTAC
TGGAGGGATCATAAATAGTGCACTATATAACGGCTGAACAACAAAAGAAA
GCAGCTATTGTGTCGGCAGAAGGAGATGCCATTGGTGCACAATTATTATC
AGATGCTTTCAAAAAAGCTGGTAACAGTTTGATCGAGCTTCGTAAAATTG
AAGCAGGTGAAGAAATTGCACAGAACATGGCTGGTAACAAAAATGTTATT
TATCTCCCAGAAGGACAAGGTGTTTTGATGAATATGCCATCGCACTAACT
CAACAGGAAGCTGAACGTGCCAGATTTTTAGTCGAAAGGACCCACTTGAC
TTTTGGACGTGAATTTACTGAAGCTGTTGAGTTGAAACAAGTTGGTTTCT
CATTCAGTACAAGAGGCACTAGTTGAGAGAGCTGGCTCATTTGGAATCGA
ATTAGATGATATTTCTTTGGCCCAATATGACGCTAGTGAGTTGATCACTC
AGAGAGATATGATCTTCAAAATGTTAACATCACACTAAGGATATTGTTCA
GACCCATTGCTTCTGAACTACCCAAGATGTACATGAGCCTTGGAGAGGAT
TACGATGAGCGTGTCCTCCCCTCTATCACCACTGAAGTTTTAAAAGCTGT
TGTTTTGATGGTGGCCATCGAGCTGTCATATTTGATAGATTTCGGGGAGT
CATTCCAGATGTATCTGGAGAAGGTACACATTTCTTGATACCTTGGGTTC
AAAGGCCCATTATATTTGATATTCGCAGCAGACCACGAAATGTTGCTGTC
ATCACTGGTAGTAAAGATGGCTGCAAGAATTTTGAATTCACTTGGTGCTG
TTGGTGTTGGATTGGCAGTTACTGGAGGGATCATAAATAGTGCACTATAT
AACGGCTGAACAACAAAAGAAAGCAGCTATTGTGTCGGCAGAAGGAGATG
CCATTGGTGCACAATTATTATCAGATGCTTTCAAAAAAGCTGGTAACAGT
TTGATCGAGCTTCGTAAAATTGAAGCAGGTGAAGAAATTGCACAGAACAT
GGCTGGTAACAAAAATGTTATTTATCTCCCAGAAGGACAAGGTGTTTTGA
TGAATATGCCATCGCACTAACTCAACAGGAAGCTGAACGTGCCAGATTTT
TAGTCGAAAGGACCCACTTGACTTTTGGACGTGAATTTACTGAAGCTGTT
GAGTTGAAACAAGTTGGTTTCTCATTCAGTACAAGAGGCACTAGTTGAGA
GAGCTGGCTCATTTGGAATCGAATTAGATGATATTTCTTTGGCCCAATAT
GACGCTAGTGAGTTGATCACTCAGAGAGATATGATCTTCAAAATGTTAAC
ATCACACTAAGGATATTGTTCAGACCCATTGCTTCTGAACTACCCAAGAT
GTACATGAGCCTTGGAGAGGATTACGATGAGCGTGTCCTCCCCTCTATCA
CCACTGAAGTTTTAAAAGCTGTTGTTTTGATGGTGGCCATCGAGCTGTCA
TATTTGATAGATTTCGGGGAGTCATTCCAGATGTATCTGGAGAAGGTACA
CATTTCTTGATACCTTGGGTTCAAAGGCCCATTATATTTGATATTCGCAG
CAGACCACGAAATGTTGCTGTCATCACTGGTAGTAAAGATGGCTGCAAGA
ATTTTGAATTCACTTGGTGCTGTTGGTGTTGGATTGGCAGTTACTGGAGG
GATCATAAATAGTGCACTATATAACG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_015402XLOC_015402Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00027369-exon-sc0000619-1575043694:155680..155903TCONS_00027369-exon-sc0000619-1575043694:155680..155903Clytia hemisphaericaexon
TCONS_00027369-exon-sc0000619-1575043694:147510..147671TCONS_00027369-exon-sc0000619-1575043694:147510..147671Clytia hemisphaericaexon
TCONS_00027369-exon-sc0000619-1575043694:147052..147194TCONS_00027369-exon-sc0000619-1575043694:147052..147194Clytia hemisphaericaexon
TCONS_00027369-exon-sc0000619-1575043694:146779..146820TCONS_00027369-exon-sc0000619-1575043694:146779..146820Clytia hemisphaericaexon
TCONS_00027369-exon-sc0000619-1575043694:146516..146590TCONS_00027369-exon-sc0000619-1575043694:146516..146590Clytia hemisphaericaexon
TCONS_00027369-exon-sc0000619-1575043694:146096..146150TCONS_00027369-exon-sc0000619-1575043694:146096..146150Clytia hemisphaericaexon
TCONS_00027369-exon-sc0000619-1575043694:145943..145983TCONS_00027369-exon-sc0000619-1575043694:145943..145983Clytia hemisphaericaexon
TCONS_00027369-exon-sc0000619-1575043694:144428..144988TCONS_00027369-exon-sc0000619-1575043694:144428..144988Clytia hemisphaericaexon
TCONS_00027369-exon-sc0000619-1575043694:144240..144369TCONS_00027369-exon-sc0000619-1575043694:144240..144369Clytia hemisphaericaexon
TCONS_00027369-exon-sc0000619-1510915933:155680..155903TCONS_00027369-exon-sc0000619-1510915933:155680..155903Clytia hemisphaericaexon
TCONS_00027369-exon-sc0000619-1510915933:147510..147671TCONS_00027369-exon-sc0000619-1510915933:147510..147671Clytia hemisphaericaexon
TCONS_00027369-exon-sc0000619-1510915933:147052..147194TCONS_00027369-exon-sc0000619-1510915933:147052..147194Clytia hemisphaericaexon
TCONS_00027369-exon-sc0000619-1510915933:146779..146820TCONS_00027369-exon-sc0000619-1510915933:146779..146820Clytia hemisphaericaexon
TCONS_00027369-exon-sc0000619-1510915933:146516..146590TCONS_00027369-exon-sc0000619-1510915933:146516..146590Clytia hemisphaericaexon
TCONS_00027369-exon-sc0000619-1510915933:146096..146150TCONS_00027369-exon-sc0000619-1510915933:146096..146150Clytia hemisphaericaexon
TCONS_00027369-exon-sc0000619-1510915933:145943..145983TCONS_00027369-exon-sc0000619-1510915933:145943..145983Clytia hemisphaericaexon
TCONS_00027369-exon-sc0000619-1510915933:144428..144988TCONS_00027369-exon-sc0000619-1510915933:144428..144988Clytia hemisphaericaexon
TCONS_00027369-exon-sc0000619-1510915933:144240..144369TCONS_00027369-exon-sc0000619-1510915933:144240..144369Clytia hemisphaericaexon
TCONS_00027369-exon-sc0000619-1491911889:155680..155903TCONS_00027369-exon-sc0000619-1491911889:155680..155903Clytia hemisphaericaexon
TCONS_00027369-exon-sc0000619-1491911889:147510..147671TCONS_00027369-exon-sc0000619-1491911889:147510..147671Clytia hemisphaericaexon
TCONS_00027369-exon-sc0000619-1491911889:147052..147194TCONS_00027369-exon-sc0000619-1491911889:147052..147194Clytia hemisphaericaexon
TCONS_00027369-exon-sc0000619-1491911889:146779..146820TCONS_00027369-exon-sc0000619-1491911889:146779..146820Clytia hemisphaericaexon
TCONS_00027369-exon-sc0000619-1491911889:146516..146590TCONS_00027369-exon-sc0000619-1491911889:146516..146590Clytia hemisphaericaexon
TCONS_00027369-exon-sc0000619-1491911889:146096..146150TCONS_00027369-exon-sc0000619-1491911889:146096..146150Clytia hemisphaericaexon
TCONS_00027369-exon-sc0000619-1491911889:145943..145983TCONS_00027369-exon-sc0000619-1491911889:145943..145983Clytia hemisphaericaexon
TCONS_00027369-exon-sc0000619-1491911889:144428..144988TCONS_00027369-exon-sc0000619-1491911889:144428..144988Clytia hemisphaericaexon
TCONS_00027369-exon-sc0000619-1491911889:144240..144369TCONS_00027369-exon-sc0000619-1491911889:144240..144369Clytia hemisphaericaexon
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00027369-proteinTCONS_00027369-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000619supercontigsc0000619:144240..155903 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
215.726	226.067	236.81	229.156	207.583	160.923	187.284	195.329	210.39	206.119	204.406	210.52	234.557	224.675	232.991	267.989	300.171	305.639	70.7733	79.1133	207.689	215.94	176.449	170.4	141.472	174.028	207.206	163.908	165.787	132.497
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR000163Prohibitin
IPR001107Band_7
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0016020 membrane
Blast
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BLAST of TCONS_00027369 vs. Swiss-Prot (Human)
Match: PHB (Prohibitin OS=Homo sapiens GN=PHB PE=1 SV=1)

HSP 1 Score: 390.963 bits (1003), Expect = 1.735e-133
Identity = 191/271 (70.48%), Postives = 234/271 (86.35%), Query Frame = 2 
Query:  137 MAARILNSXXXXXXXXXXXXXIINSALYNVDGGHRAVIFDRFRGVIPDVSGEGTHFLIPWVQRPIIFDIRSRPRNVAVITGSKDLQNVNITLRILFRPIASELPKMYMSLGEDYDERVLPSITTEVLKAVVAQYDASELITQRDMVSHSVQEALVERAGSFGIELDDISLTHLTFGREFTEAVELKQVAQQEAERARFLVERAEQQKKAAIVSAEGDAIGAQLLSDAFKKAGNSLIELRKIEAGEEIAQNMAGNKNVIYLPEGQGVLMNMP 949
            MAA++  S+G  G+ LAV GG++NSALYNVD GHRAVIFDRFRGV   V GEGTHFLIPWVQ+PIIFD RSRPRNV VITGSKDLQNVNITLRILFRP+AS+LP+++ S+GEDYDERVLPSITTE+LK+VVA++DA ELITQR++VS  V + L ERA +FG+ LDD+SLTHLTFG+EFTEAVE KQVAQQEAERARF+VE+AEQQKKAAI+SAEGD+  A+L++++   AG+ LIELRK+EA E+IA  ++ ++N+ YLP GQ VL+ +P
Sbjct:    1 MAAKVFESIGKFGLALAVAGGVVNSALYNVDAGHRAVIFDRFRGVQDIVVGEGTHFLIPWVQKPIIFDCRSRPRNVPVITGSKDLQNVNITLRILFRPVASQLPRIFTSIGEDYDERVLPSITTEILKSVVARFDAGELITQRELVSRQVSDDLTERAATFGLILDDVSLTHLTFGKEFTEAVEAKQVAQQEAERARFVVEKAEQQKKAAIISAEGDSKAAELIANSLATAGDGLIELRKLEAAEDIAYQLSRSRNITYLPAGQSVLLQLP 271
The following BLAST results are available for this feature:
BLAST of TCONS_00027369 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
PHB1.735e-13370.48Prohibitin OS=Homo sapiens GN=PHB PE=1 SV=1[more]
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