TCONS_00027340 (transcript) - C. hemisphaerica

Overview
NameTCONS_00027340
Unique NameTCONS_00027340
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2761

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00027340 ID=TCONS_00027340|Name=TCONS_00027340|organism=Clytia hemisphaerica|type=transcript|length=2761bp
AAAGATGAAACCATTCCAGTAAATGGAAAAAGACAACCATTCAAGTAACT
GACAATTGTAGTTTAACGGATTTAATATCCCTATCTCAAACTTGAAATAA
AGCTGCtccaaaatttcagacatcTTTTTTCTATCATGAAATATTTActg
tgaagtcaggtaacttgcatcactggagggaaacttgcatagccatcaaa
tgactgaccaatcaaagcagcaaaatttcaaaacaaatgaactgcgcagc
tctgctcgcagctctactctaccatttttgttttgattcaactttgtatt
ttaatgaccagtcaggtcattcatttgagggccatgcatgttagcctcca
ctgatgtaagttacccgatctcacggtacaaCTTGAGTCGCTTGAGCATG
AATCTTTGAAATAGAAGGTTACAAAAACGTGTCATTGTTCAATTTGATAA
CAAGGAATCCTACCTTAAAGACCTCtaaagaatttctcaagaaaTGTACA
TCCATATCAAATCACAGAGACCTCACTTTTTTgtacgaaaaaaaaagaat
atgaaGCTGTATATAGATAATTATTAAACAAATTCGTTTAACTGTAGCAT
ACTGAAACCAACATTGTTATAACATCTTTTTAACATTCTATCTACGTTGa
tctttctattattttcagctctaaaaaagggtgtcagaaAACGCATCTTC
ATATCCttttttacgaaaaaaaaaagaatatgaaGCTGTATATAGATAAT
TATTAAACAAATTCGTTTAACTGTAGCATACTGAAACCAACATCGTTATA
ACATCTTTTTAACATTCTATCTACGTTGatctttctattattttcagctc
taaaaaagggtgtcagaGAACGCATCTTTTGAATAACTACCGTgaaattg
ggtaacttgcatcactgTCTATCtatcaagtttatcaatcatactttctg
tcatactgtcaactgctctaacttgggacaattgacggtcaaaacatggg
actgttgcatatctggtctgtattttcacttactgtaaaatcgaaagaga
aatcgtgtattctttaatacgccgttccttaactcaaatcaaatgacttt
ggaggttcggtgaaatggtggcggAATTGCCGTCctatgttttgtcagat
agtcccaagttggagcagttgacggtagcatgtcacgataactttcactg
atagggcgccctttttaacttttttgttttcattcaaaatgaccggacac
cTTCGCCTATCGCTTGATGGGATTAACGAATGACGAGTGTGTAACTTACC
GCGCGAGTTACTTCACAGACActtgcgtgtgttccactacggatattttt
catatttcgatttaaaagcctacttggtgcaaaagaaaaattgtttattt
tttaatacgccattcattaactcaaatcaaatgacttcccatgttttgtc
agatagtcccaagttagaacaTCACTTGACGttttcatttgTATCACACC
TTTGATGATGATTTGTGGTTATTTATCGTATCTAATGGTCAAACAAAtgg
atgaaaaagaaaagaaaaaaaacaaaaaagCAGTGAAGTCTTCAAACAAA
TTAAAAACCAGAAGAAAAGTTGCAAAAGCTGATTGATGTGTTGGAAAATT
AGGATTATCAATTATGAAGAAGAAGATTATCGAGAAATATTTTAAGACAT
CTTACGAACAAGAATGTCAAAGTCGAGGGTACGAAAAATTGTTAGTTATT
TATACGAATCAAGAACGTTTTAAAAAAATGCAATGATTTCAATATAAATT
ATGCAGGATtacactttttgaaatttatttttgtaaattaaagATAGTAC
ATTATGActaattgaactaaaaaagatcatttttatttcatttttatacc
TTTAACCTGTCTCAATTTTTCCATACAAGACTCTTTGAACTTTTAGGTAT
AAGTCATATTcctttttaaaagcattttggATTATGAGCGCCAAGTTGTA
GTGCTAATCTACTTCCTTATTCGATTAAGAATCAGCTACATCTTAATATc
aataaaaattcataaattatgACGACATCATTTCTTAAACTTTGTTTATA
TAGTGTGTGATCGATTTTTCACTAATACTCTATCATGATAAACCCATAAT
ATTTTGATGTGAGAAATATACTAAAAATTTTGCGGTAATCGTGATTAAGT
GGGTAAAAATTCATCTTCTCCAAATACCTCCTGGTGTTCCATTTCACAAT
TGTTTGAAACTACTTTTTGCAGTGATCCATGAAATTTTGCTACCTTCATG
ACCCTTTTTCAATCCTCATTACAATGAAAAGTCTGTCCGAAAAAAGTCCG
ATCAGAATCTTATACAAATTGAAATCATCCTCATAATTCATCTCATTTTA
tgtagaaaaaattatttttgtctaGTAATATTTATAGgtatatgtttttt
ttcgaatgttcttaaagttttaagcttaaaaatattcttaaattatttgt
gcaatttccaaagatattgggtgttttagagtccatgaAAAGTTTAAATG
TTCTTTACTTGCTCTTAAAATTTCGGCCAACTAAGCCTGAAGTACTAAAC
CGGAGAGACTGCAGACTTTACTAAAAACTGAAAATctagttttgaatttt
tatttttcatcaaaatttaactaGTCTGTTATTAGTGCTTGTTATTGTAC
TTTGGACATGGAAAAAGTTTTACACACTTTTAAGTCCCCGAACCTTGTCA
GAATGGAGGCT
Run BLAST on NCBI

transcript from alignment at sc0000616:54487..71317-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00027340 ID=TCONS_00027340|Name=TCONS_00027340|organism=Clytia hemisphaerica|type=transcript|length=16831bp|location=Sequence derived from alignment at sc0000616:54487..71317- (Clytia hemisphaerica)
AAAGATGAAACCATTCCAGTAAATGGAAAAAGACAACCATTCAAGTAACT GACAATTGTAGTTTAACGGATTTAATATCCCTATCTCAAACTTGAAATAA AGCTGCTCCAAAATTTCAGACATCTTTTTTCTATCATGAAATATTTACTG TGAAGTCAGGTAACTTGCATCACTGGAGGGAAACTTGCATAGCCATCAAA TGACTGACCAATCAAAGCAGCAAAATTTCAAAACAAATGAACTGCGCAGC TCTGCTCGCAGCTCTACTCTACCATTTTTGTTTTGATTCAACTTTGTATT TTAATGACCAGTCAGGTCATTCATTTGAGGGCCATGCATGTTAGCCTCCA CTGATGTAAGTTACCCGATCTCACGGTACAACTTGAGTCGCTTGAGCATG AATCTTTGAAATAGAAGGTTACAAAAACGTGTCATTGTTCAATTTGATAA CAAGGAATCCTACCTTAAAGACCTCTAAAGAATTTCTCAAGAAATGTACA TCCATATCAAATCACAGAGACCTCACTTTTTTGTACGAAAAAAAAAGAAT ATGAAGCTGTATATAGATAATTATTAAACAAATTCGTTTAACTGTAGCAT ACTGAAACCAACATTGTTATAACATCTTTTTAACATTCTATCTACGTTGA TCTTTCTATTATTTTCAGCTCTAAAAAAGGGTGTCAGAAAACGCATCTTC ATATCCTTTTTTACGAAAAAAAAAAGAATATGAAGCTGTATATAGATAAT TATTAAACAAATTCGTTTAACTGTAGCATACTGAAACCAACATCGTTATA ACATCTTTTTAACATTCTATCTACGTTGATCTTTCTATTATTTTCAGCTC TAAAAAAGGGTGTCAGAGAACGCATCTTTTGAATAACTACCGTGAAATTG GGTAACTTGCATCACTGTCTATCTATCAAGTTTATCAATCATACTTTCTG TCATACTGTCAACTGCTCTAACTTGGGACAATTGACGGTCAAAACATGGG ACTGTTGCATATCTGGTCTGTATTTTCACTTACTGTAAAATCGAAAGAGA AATCGTGTATTCTTTAATACGCCGTTCCTTAACTCAAATCAAATGACTTT GGAGGTTCGGTGAAATGGTGGCGGAATTGCCGTCCTATGTTTTGTCAGAT AGTCCCAAGTTGGAGCAGTTGACGGTAGCATGTCACGATAACTTTCACTG ATAGGGCGCCCTTTTTAACTTTTTTGTTTTCATTCAAAATGACCGGACAC CTTCGCCTATCGCTTGATGGGATTAACGAATGACGAGTGTGTAACTTACC GCGCGAGTTACTTCACAGACACTTGCGTGTGTTCCACTACGGATATTTTT CATATTTCGATTTAAAAGCCTACTTGGTGCAAAAGAAAAATTGTTTATTT TTTAATACGCCATTCATTAACTCAAATCAAATGACTTCCCATGTTTTGTC AGATAGTCCCAAGTTAGAACATCACTTGACGGTATGGTATATAAAACATT TCCTTTTGCAATCAGCCATGTTTACAAAAATCCTGAATTTCGTGATTTTT TTACTTGGCCTCGTTCAAAATTGGTTTGGTGTTGTTCTAGTACTCCGTTT ACTTTAATTTCTGGACAGTTTAAGGCAGGGGCAGGGATAGTTTGAGAGGA TTCTGCTGCACAAAGGAAATTCTATAGAAGTTTGTTTTTGGTTGTTTTTT TTCAAGTTCAAAGACGTTTGTTCGTGCACTGGGGTCGTTTGTGCATTGGT AACTTGACTCTATTATCTATTATTGCGTATAGGACGGACACGGGCGTTTT GCTAATTTCCGCACGTCTCACAACCAGTCAGGACCTCCTTTCACTTTATC AATATTACTCGAACGGCAGTGCGCGCTAAATTATTTTGGTTTCACTTTCA TTTTCAAGAAAAGGTCTTAGCAACAGAGCGTGCATACATAGCAAGGGGGC TGGGTAGAAAAATCTAAACATAGAATTTANCAGTGTGTGCTAAATTATTT CAAACAAACGTTGTAGCAACAGGGCGTGCGTACATAGCAACGGGGCTGGG TAGAAAAATCTAAACATAGAATTCAAAAAAAATACCGATCACCGTATAGA GCACTAAAAAATACCCCCTTTCTATGTTTAGTTTGTTCTACCTTGGATTA TAACTGAAAATATCTTCAAATAACCTTTGTCCGCTATCAGCCCGCGCCGT AATCTTTGCCCGTTCCAATTCTTAGACAATGAATAAGAGAGGTGCGCTTA GCTAAGCCGTGCTTGCAGGCGATAAATTTATGTTTACTTCTCTTGTATAT CTTAGTGGTATTTATCAAATGAAAAGGATGTTGACAAAATATTGATTATG ACATCATTAAATATGTCAATGCCGATTCAACGCCCGTTAAAGAAAATAAT TTGTAAATAGTCCTTTTTATCGTGAAATTTAGAAATACGAACAAAAAAAG AATTAAATTTAATATTTTTTTCCTATCTAGATTATATTAGCGTTAGAATA CGGTAAATTTTCACGAAAAATATTATGCGATGGCGCAATCGCGCCCACGG GAAAGTTTCAAATTTTTAATTAGCGGGAAATCAGGGAAACCGGTTCACCA CGTGGATAAAAAACGTACGGAATGAAACATGAAAGAAGGTTTTCAACCAG ATTTATTCAGATAAAGCTATAAGATAATAGGTTCATTACTTGTGGATTTT AAGACCTACATAAGCAAAAACGAAAGTTGTTGGGAAGGAAAGAGTAAAAA CGCAAGACAGAAGGCAGTCAAGAACAAGTGCAAATTAGGATACCTTATGC AATTTCTCCTACTTAGGAGAGTATCTTAAATTGGATACAAAAAAGTATCC AAAATAGCAATCAACATCCTAATTACCGTGAGAGGTCCTAAAGCCGACAC CACTGCCTAAATCCGATGGGGTCTTTCAAAGATACAAACTAAAATAAAAA CAAACCTTTCGCTGTGACGCAACGANNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNAGAGATTTGATACACTGAACCAATCGAACCAAATA ACAATAATTGCTTCTTATAACAAAACATATTTTTTTATTGCAATATGCAC AACGTCATAAATGACAACAGTATATAGTAACAGCATCATAAAAAGTAATG AGATGTTTTGATTTCCCAAAGCACACGAAAATATAAAAGAGGTCTGTGTA CGAGCGTGGTCATTTTGAAACGTTACGTAATCAAGCCTGGTTTTTATTAC TTTACACTGGCACTTGGCTTGGTTGCGGGCCTTCCGTAAATAAACATCTG GAATTATGGGTGGTAAAGTAAAGAGGGCGTTGATAGTTGCCGCTCATTGA TTCAATGTTTGTTATTCAAATTAAGTGCTACCGCATCCGCCCTTTTTTCA AATTCGCACCATTTTTGCAATTTACCCGTTTGTTTCTTGATGGAAACCAG CCCAAGTTGTTTCGTATTTTTCCCGCACAAGTCATTTTATTACAAAACTG TTCTGTTATCGTTTTAAATATGAGCAACTCTGGGTAAAAGGTAATTATTT TTACAACTCACACTTTTTAATTACATTAATTGACATCTTGACATTACAGC TATCTTGTTAGATGTTTTGTTTCGAGAGTTCTAACATTAGTTCAACTTGG AGAGGGAATGTTTGTAAACATAGAATTTTTTTTCATAACAGTTATTTGGG GGGTCGGAATTAGGCAAGGGTGTCGGCTTTAGGACCTCTCACGGTAGGAT ACTAAAAACCAAAAAACCCGTATTTTCCACCAACCAGAGACATCCGCGCC ATCTTACCACTTCCAAGATGTAAATAATAAGCAAATGAGATTGTGTACTG AATTTCATCGAGTTTGGCTGGCGGAATGCAAAACTATAGCCCAAAACACC ACTCAAATGTGCTAACTAGCATACACGAACGCTTTTTTTGCGAGAAAATC AGACCGTATCGGGCTGTTCCGTAAAAAGAAAAACAAATCTTTAGCTCGTG TTCGCAAAATTTTAGGCTCTGAACGGCAGATTATTAAGGATGTTAATTTT CGAGGAACCCACNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCCCCTCACGCCCCGCCAC ACGGAAGACTAGATTTCATCCGCCATTTTTGGCGCGATTTTGGTGCTTCC GAAAATTATTTCTTGCTGGCGTGGTGTTAGTGAGGCGATTCTTTGAAAAG GTGGTTTTTTTGTGGTTTGAAAATGGAATAACTTTGGAACTACTTAACCA ATTTTAACAAATGACCCCTCATTTTTCTCACAAAGGTAAGGACTTTCAAA TAAAATTAGTTTGGTTTTCAAAATTTGAGGGGAAAATTTTGGCCTGACCA CCCTAATTTAGGATACCTAAATCTCCAAATTAGGATACAACTCTCCTAAG TAGGAGAGATTGCCGACAGGTTTCCTAATTTGCACTTGTTCTTGACTGGA AGGTTTGGATTGGTTGTGTTGATCAGGTATGTTTTTATTCTATCCGAACA AATATATATTTATATTATAAAAAAAGACCAAGGAGACCCTGTGACTGACT GCTCACAACAAGATAGATGGATAGATATATTTTTTCTGTAAATAGTATAT CCTGGAAATGTACATTTAAAAATGAGCTACGTTAAAAAAAAAATTTTCGT TTTTACTGTTGTTGTACAGTGCAGTGCAGTAGGCATGTAAATAAATTCTG CCCTTGAGCTCTTGTCTTGATAATTTCCTTCAAAAAAGAAATCCCAAACA AAAATTGATTTAATTAGGATTTCATTAGCATCATGGATCAAAATATTCAA TAAATTACCTGATATTCAATGTCAATAGAAGTGAATGGTTAAAGCTTCAG GGTGCCTCTAAACTGCTAAATCCAGTATCATTTTTCGCTGTGATTTGTTT ATGATCTCCAGGGGGATGCTCTTATATCGGATGGCCAATAGTCACCTTCA TTTTTTTATTTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNTCGAATTTCAGTCAGGTTTAAAAAAGGGGTACTGTTAC CCATATTATAATAATATTACCCCCGTCTTTTGCCAGTTCGGTATAATATG TTATGAATTACGTGGGTTTGCTGGGCGGCGATGGCTCAACGAATAGAGCG CCGGCTTCCGAATCTGAAGGTCTTTCTTTGGTGGTGGTTCGAATCCCACT CGGTGCGAAAATTAGACTGGTCGAAATTGATGGACAAATGATTGACAGGG ATGAAAACTCAGTCAGAAATGAGAAACTAAGTCTCAGAAACTCAGAAACT CAGACAGTCAGAAAAGAGANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN 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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTAACAAATGACCC CTCATTTTTCTCACAAAGGTAAGGACTTTCAAATAAAATTAGTTTGGTTT TCAAAATTTGAGGGGAAAATTTTGGCCTGACCACCCTAGTATAGACTTAA ACTCATAGTATATCAAGATTACTGGATTTCCAGTGTACGGGCTGATTTTA CTTTTGTTTTGGGTGGTTTCATTTTCGATTTCAAGCCAACATCTTAGCAA CAGGGTGCTCTCCCATAGTTACAGGGGTTTGTGCAAATAAATTCATTTAC GTCAATGAATCTAAAAAAAATTAAAAATATTTGACGTCAATTATTTTGAC TTTTATGACGTTAAATAAGCGCAAAATCCCACTAATAAAATGGGAATAAC TCGCGAAAAAAAGCGAAATTTAAAAAAATGAAAAAATTACCCCTCAGTTT TAACATCAGGAAGGTGTGTGCCAAATTTCAGCTCTGGTAAGCAATCAGTA GAAGAGACCACATTCGTTTTTGTTGCAGATTTCTATAAAAACTTCTCTCA GGGATTACCGTGAAGTCGGGTAACTTGCATCAGTGGAGGGAAACTTGCAT AGCCATCAAATGACTGACCAATCAAAGCAGCAAAATTTCAAAACAAATGA AGTATGCAGCTCCGCTTCGCAGCTCTACTCTACCATTTTGTTTTGATTTA GCTTTGTATTTTAATGACCAGCCAGGTCATTCATTTGAGGGGTATGCATG TTAGCCTCCACTGATGCAAGTTACCTGTTCTCACGGTACTTGTCAATGTA CATTGTACATTAAGTGGATAAATTTTCGCGAGACGAGAATTTAAAGATTT CGCGTGGATTAAATTTCGCGAATCAAGGGTCTTTAGAATTTTCGCGTGGA TTTAATTTCACGAAAATGGTCTTCTTTATTTAATTTCGCGACTATATAAA TTGTTACTAAATTGGACTAAATTTCGCGAAAATGGCCAAAATTCGCAAAA AACCGCGAAAATTAATCCACACAAAAATTTATCCACTTAAGGTACACATG TGTTGTGTCAACTTGTCAGCATTGTATATATTGTTGTAAAGGAAAAGATA AAAGAGGTAAGACTAGCCTAGTTTCTAATCCTGATATAAGAGTTTAAGTT TAGACTGCCTTTCACTTTCATCGTTGTTTCGTCAGCCATCTTTAATTTTG CTATGGCTTGCTTAGTTTACATTTTAAAAATAATGGAGAATTAATTATCT CCGTAATCATAATCAACAGAATAGCGGACTTTGTAGGTTTGGTGAAATGG TGGCCGAATTGCCGTCCCATGTTTTGTCAGATAGTCCCAAGTTGGAGCAG TTGACGGTAAAAATTAATAAGATTTTGATTATAATTTTGATTTAGGTGAA ATTTTAAACACTTTTTTTCTTAAGTTTGATTAGCTACCTCCAAATTTCCT GAATTTCTAGCATTTGAAGTTAAATAACTTTTTCATTTTGGTAATATTAT TAGATTTTAAATATTTTTTGGGTTTGTAGTGTAGCCTGGATACAAACAGT AAGATTTTTCAATAAGAGTTCTGAAAAAATAGTCGTTTGAAAGAACAGAA CTTTGTCACAAAAATTCCTGGAATACACTGTTTAGGAGTCTCCCTATCTC CATTGTGTTCCACCGTGAAAGTGATAGAGGTAAAAATGCGCACTTTAGTA ATGGGGAAGGTTAGAGCAATGCAAACATTGTCAATCTTTTTCTTTCCTTT AAAGAGAATGATTTAGATATTTGAACATGATATCAATGATAATTTTATGG ATCTCTCCTGAAAATTTCCTCTTCTAATTTCGACATCCTTCTTTAGAGAT AGAAATAATAGGAAGGTCAGAGTCAATGATAAACAAGAAATTTTTTCCTC TCTAATCGCCAAGCAAAGAAAAATAGTTTCAATCAGTGATTCAGACCTTC CCGTTATTCCTCTCTCTAAAGAAGGGTGTCGAAATTAGAAGAGGGCTGTG GACATTAGACCAACTTACGATTATGATTAAAAAGAGTTTTTTACCTACTT TTTTTACTACCTTTTTTTTACGGGAAAGAGCGGTCGCCAAAATCAAAACA GAAAAAACTAACTGTCTGCTAAAATTTAAGTACCCTGCGAGCAGCCAAAA AAAGGAAACCAGAGACATCAGAATCACCCTGTTTGTTTTGGTTTTATCAT TTTTGAGTCATGATTCACTTTAGCTGATTTTTGCTGACATCATCAGAAAA ATTGAAAACATATTTATTAATAGTTAGAAATAACCAAGACAAGACATTTG GCAAAGTTTCATAGTTTTTTGATGAGTACTTTTTGAGATATTGAAATTTT ATAACGTCATCAATTATGATGTCAAAAAATAGGTTTCCCTAAATTCTCGA AATTTTGTTATAACATCGTTAACAGTGATTTTTGAAATCTTCAACATTAT ACGCTTTCTTTGATGTATGACAGTTAGTTGTGATAGCGTCCCACCGAAAT GCGTATCAAAGATTAATGATGTGAAAGTGCTATAGAAAAATAACCCGGTG CTTTTTAATGAAATTAACATTTTCAAAAACTATGAGAAATTGCCTAAAAT TTGAGCCAAGCCAAACTTTAAAACTGATTTGAAGAACAACTTCCCAAGAA AAATATCTACGGGGGAGACGGAACCCACCTAGATCCGTGCACTGCCGGAT AGGCTATTTCCTGGAAATTTAGCTGGACCTCAAACACTGACCCATATTTA CATGTGCAGGATTATTTTTACTATAGCGTATAAATGAAGGCCTTAAATGT CAAAGCGCTGCCTCTCGAGACATCAGTCAGTTCAATTCACAAATTGAATG ACAAAATTTGGTTGGTTGATATTCTGATTTTAAGTTTTCAAGTTTTAATT GATTGTTTTGGGAACTTGAACTTAATTCAGGTAACTCTCATTTGTGTAGA GATGAGTCTCAACTCTCATCTCATTTTCGATTTTCAAAATACATCCTGTA GATGACTGATGTTGTTTTTTCTGAAAGCTTGATTTCCTAGTGTGACTAAC TGTATGAATGATAATAGGTTTTCTTGCCAAACTTATGGCTTATTGGGACA CGCCATCAAATTTTGGAAAGCATTGTTCTTCATAAATGTCTGTTTTAGTT AAAACTTCAAGTTAACATCCTCAATTAAATTAATTGTTAATTTAATAGAT CCAATGACTAGGAAAATAGACTAGTAGAATAGATAAAATGACTCTCAAGA CTTTTCAAGATGCTTTGTATTTAAAAAAGAAGCTCTAGTCATCAATAATT TGATTCGATTTTCAGTTTTCATTTGTATCACACCTTTGATGATGATTTGT GGTTATTTATCGTATCTAATGGTCAAACAAATGGATGAAAAAGAAAAGAA AAAAAACAAAAAAGGTAATTTTTAAGTTATTTTTTTGTTTTGCTAAAGGT TGATTGTGATCAGATCAGATTTGGTGAAAAGTGAAATTGGATCAAAAAAA GAAAACATGTGCATCTCTAACAAAACTAAAAATGTGTAAAATCTGCAAGA TTTCAAAAAAGAGACAATTTAAACAAAATAATGAAATTTGATTTTTCTTT ACAGCAGTGAAGTCTTCAAACAAATTAAAAACCAGAAGAAAAGTTGCAAA AGCTGATTGATGTGTTGGAAAATTAGGTGAATAATTTTTCTTCATTTTAC AGAATTTTATGTTTTTTATATGTTGACCTGATTTATAAAGCATATAGTCA TCATTTTCTTGTACAGTTGTTTTTTGAGGGCTGTTCCTCAACACAACTAT AGAGCTTAAGAGGTAAAAACCATCGCGATCTTATTTCGAGTTAACTTCTG CCAATTGTATTTGAACCAACTGGCTGCAAAGTCTTGGATAAATTTTTCGA AATTTTGNTGCCGGATAGGCTATTTCCTGGAAATTTAGCTGGACCTCAAA CACTGACCCATATTTACATGTGCAGGATTATTTTTACTATAGCGTATAAA CAAGGCCTTAAATGTCAAAGAGCTGCCTCTCGAGACATCAGTCAGTTCAA TTCACGAATTGAATGACAAAATTTGGTTGGTTGATATTCTGATTTTAAGT TTTCAAGTTTTAATTGATTGTTTTGGGAACTTGAACTTAATTCAGGTAAC TCTCATCTGTGTAGAGATGAGTCTCAACTCTCATCTCATTTTCGATTTTC AAAATACATCCTGTAGATGACTGATGTTGTTTTTTCTGAAAGCTTGATTT CCTAGTGTGACTAACTGTATGAATGATAATAGGTTTTCTTGCCAAACTTA TGGCTTATTGGGACACGCCATCAAATTTTGGAAAGCATTGTTCTTCATAA ATGTCTGTTTTAGTTAAAACTTCAAGTTAACATCCTCAATTAAATTAATT GTTAATTTAATAGATCCAATGACTAGGAAAATAGACTAGTAGAATAGATA AAATGACTCTCAAGACTTTTCAAGATGCTTTGTATTTAAAAAAGAAGCTC TAGTCATCAATAATTTGATTCGATTTTCAGTTTTCATTTGTATCACACCT TTGATGATGATTTGTGGTTATTTATCGTATCTAATGGTCAAACAAATGGA TGAAAAAGAAAAGAAAAAAAACAAAAAAGGTAATTTTTAAGTTATTTTTT TGTTTTGCTAAAGGTTGATTGTGATCAGATCAGATTTGGTGAAAAGTGAA ATCGGATCAAAAAAAGAAAACATGTGCATCTCTAACAAAACTAAAAATGT GTAAAATCTGCAAGATTTCAAAAAAGAGACAATTTAAACAAAATAATGAA ATTTGATTTTTCTTTACAGCAGTGAAGTCTTCAAACAAATTAAAAACCAG AAGAAAAGTTGCAAAAGCTGATTGATGTGTTGGAAAATTAGGTGAATAAT TTTTCTTCATTTTACAGAATTTTATGTTTTTTATATGTTGACCTGATTTA TAAAGCATATAGTCATCATTTTCTTGTACAGTTGTTTTTTGAGGGCTGTT CCTCAACACAACTATAGAGCTTAAGAGGTAAAAACCATCGCGATCTTATT TCGAGTTAACTTCTGCCAATTGTATTTGAACCAACTGGCTGCAAAGTCTT GGATACATTTTTCGAAATTTTGTCCACAGATTTTATGGCCATGTCTCCTG AAGAGTTGACCTGTTGTTGAACCTTTAGCTATGGAATATTTGAGACTTAA AAAACGATACTATAAATTGTAGAGAGACTACAGTAAAATAGTAATACATA TTTTTTCTGTTATTTTCTCAAGGATTATCAATTATGAAGAAGAAGATTAT CGAGAAATATTTTAAGACATCTTACGAACAAGAATGTCAAAGTCGAGGGT ACGAAAAATTGTTAGTTATTTATACGAATCAAGAACGTTTTAAAAAAATG CAATGATTTCAATATAAATTATGCAGGATTACACTTTTTGAAATTTATTT TTGTAAATTAAAGATAGTACATTATGACTAATTGAACTAAAAAAGATCAT TTTTATTTCATTTTTATACCTTTAACCTGTCTCAATTTTTCCATACAAGA CTCTTTGAACTTTTAGGTATAAGTCATATTCCTTTTTAAAAGCATTTTGG ATTATGAGCGCCAAGTTGTAGTGCTAATCTACTTCCTTATTCGATTAAGA ATCAGCTACATCTTAATATCAATAAAAATTCATAAATTATGACGACATCA TTTCTTAAACTTTGTTTATATAGTGTGTGATCGATTTTTCACTAATACTC TATCATGATAAACCCATAATATTTTGATGTGAGAAATATACTAAAAATTT TGCGGTAATCGTGATTAAGTGGGTAAAAATTCATCTTCTCCAAATACCTC CTGGTGTTCCATTTCACAATTGTTTGAAACTACTTTTTGCAGTGATCCAT GAAATTTTGCTACCTTCATGACCCTTTTTCAATCCTCATTACAATGAAAA GTCTGTCCGAAAAAAGTCCGATCAGAATCTTATACAAATTGAAATCATCC TCATAATTCATCTCATTTTATGTAGAAAAAATTATTTTTGTCTAGTAATA TTTATAGGTATATGTTTTTTTTCGAATGTTCTTAAAGTTTTAAGCTTAAA AATATTCTTAAATTATTTGTGCAATTTCCAAAGATATTGGGTGTTTTAGA GTCCATGAAAAGTTTAAATGTTCTTTACTTGCTCTTAAAATTTCGGCCAA CTAAGCCTGAAGTACTAAACCGGAGAGACTGCAGACTTTACTAAAAACTG AAAATCTAGTTTTGAATTTTTATTTTTCATCAAAATTTAACTAGTCTGTT ATTAGTGCTTGTTATTGTACTTTGGACATGGAAAAAGTTTTACACACTTT TAAGTCCCCGAACCTTGTCAGAATGGAGGCT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_015382XLOC_015382Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00027340-exon-sc0000616-1575043694:69837..71317TCONS_00027340-exon-sc0000616-1575043694:69837..71317Clytia hemisphaericaexon
TCONS_00027340-exon-sc0000616-1575043694:57454..57552TCONS_00027340-exon-sc0000616-1575043694:57454..57552Clytia hemisphaericaexon
TCONS_00027340-exon-sc0000616-1575043694:55977..56048TCONS_00027340-exon-sc0000616-1575043694:55977..56048Clytia hemisphaericaexon
TCONS_00027340-exon-sc0000616-1575043694:54487..55595TCONS_00027340-exon-sc0000616-1575043694:54487..55595Clytia hemisphaericaexon
TCONS_00027340-exon-sc0000616-1510915933:69837..71317TCONS_00027340-exon-sc0000616-1510915933:69837..71317Clytia hemisphaericaexon
TCONS_00027340-exon-sc0000616-1510915933:57454..57552TCONS_00027340-exon-sc0000616-1510915933:57454..57552Clytia hemisphaericaexon
TCONS_00027340-exon-sc0000616-1510915933:55977..56048TCONS_00027340-exon-sc0000616-1510915933:55977..56048Clytia hemisphaericaexon
TCONS_00027340-exon-sc0000616-1510915933:54487..55595TCONS_00027340-exon-sc0000616-1510915933:54487..55595Clytia hemisphaericaexon
TCONS_00027340-exon-sc0000616-1491911889:69837..71317TCONS_00027340-exon-sc0000616-1491911889:69837..71317Clytia hemisphaericaexon
TCONS_00027340-exon-sc0000616-1491911889:57454..57552TCONS_00027340-exon-sc0000616-1491911889:57454..57552Clytia hemisphaericaexon
TCONS_00027340-exon-sc0000616-1491911889:55977..56048TCONS_00027340-exon-sc0000616-1491911889:55977..56048Clytia hemisphaericaexon
TCONS_00027340-exon-sc0000616-1491911889:54487..55595TCONS_00027340-exon-sc0000616-1491911889:54487..55595Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000616supercontigsc0000616:54487..71317 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
7.41971 7.14698 8.80299 11.7103 9.23766 6.5602 6.58701 6.70769 3.63818 3.50984 2.62793 3.87577 2.29287 2.55696 2.17427 2.27114 1.84016 2.21033 2.42936 2.52489 4.40922 4.65666 4.12736 3.07104 2.4006 3.40199 4.92215 5.05972 6.44622 4.98063
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00027340 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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