TCONS_00027321 (transcript) - C. hemisphaerica

Overview
NameTCONS_00027321
Unique NameTCONS_00027321
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1553

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00027321 ID=TCONS_00027321|Name=TCONS_00027321|organism=Clytia hemisphaerica|type=transcript|length=1553bp
AACAAGTTAATTACACCTGATGCTGACTATAACCCACCCATAGTAAATTA
AATTCTCTATCTTGTCTCGAGATTATAAAGTTGAATATTTCTTCATTTTA
TCAAAGATTCTCCGACCTAacggtcgaaggatgatgatgatcaaagattc
attgtttttatatttNGAAGCTCTCGCCGAACTTTTAACTGTCAGCCAAA
TTCAGGACCAGTTCATTGAGATTGGAGGTGCCCGAACACTTTGCGCATTG
TTGCATAGCAACAGTCAACGTTTAATGAATGAAGCAGTCATGGCAATCTC
TTACATTGTTGCTGATAGTGATACCAACAAGCATGCGTTGGTCGCTGAAG
ATGGtttgtATGATTTGGCAAGTGCTGCAAGAAAAGCGCCTTCGCAAGCC
GGTCAAATTATTGCTGGAATATATTTGGAGTTATCTTTTAACCCTGAAAT
ACGCGCCCAACTTGCATCCGATTCTACTTCAGCTTCTGCACTGATCCATT
TGATCAAATCAAAAGACGATGAAACAAAAAGACTTGGCCTACAAACATTG
GAATTGCTCGCCATCGAGAATCCTGAATTTGTTGTGACAAGGGATGATTT
GTTGACCTATTTGATTGAAGTTCCATTCAACTCAGCAGATGACCAACTAT
GTCTCCTATCTGGAAAGATTTTACTCTATTACGCAGAGACACCTGAGACA
TGTGATCAGCTGATTGCCCAATCTGGTTTCAAGGACGGTTTGCTGCAACT
AGCCTATAATCCAGACCCTGTCCTTCAAAGTGTTGTTGCCAAAATCATTC
TTGCTACATTGGAAAATTGTGAGAACAGACAAGACGTTTTAGCTGTTGGC
ATCATAGAAGTATTGGCATATCTCCATGACAACTGCTTAGACCGTGAAGC
TTGGGAAATGGCAGAGAAAGCTATAGATACGTTGCATGGATACACAATGA
AAATCAAGAAGAATGGTTCTCTTTCTGATAAGCCTGGATCTTCGGATGGC
TCCAGTTCTTCTGGAGGACCTCCAAGTACGCTTGATTCCACTGATAAAAA
GAAATTATGAGACTCTCATCCTCCGTTTTCTGATGAGATATATTGACATG
TTAGTCAGTGTTATTTTCCACCATAATGAGTGTTTAGAAATTTACGCAAT
GATTGAACCTGGTTGAACCTTTGGTCTCAACCCTTGGTGTAAACCACTTA
TAATATAATTggccattatgatttttggacctacctggaggtcctataaa
ttaacctctgtccgttcgtccgtccgttcgtccgttcgtccgttcgtccg
tccgtctgttaccagcttttctcaggattggctcattagttttttctgat
ttttggcacaatgatgcaaaatggcaatgcccaaaatgtgacggagcccg
attttcgaaaaaaaatcatttccggccaaaattgccggaaatatgccgga
aaaacctgttttttggcattttctcaagatttcatcattagatttttctg
attttttgcacaaagatgcgtattagcaatgcccaaaacttggccgagtc
cga
Run BLAST on NCBI

protein sequence of TCONS_00027321-protein

>TCONS_00027321-protein ID=TCONS_00027321-protein|Name=TCONS_00027321-protein|organism=Clytia hemisphaerica|type=polypeptide|length=309bp
MMMIKDSLFLYXEALAELLTVSQIQDQFIEIGGARTLCALLHSNSQRLMN
EAVMAISYIVADSDTNKHALVAEDGLYDLASAARKAPSQAGQIIAGIYLE
LSFNPEIRAQLASDSTSASALIHLIKSKDDETKRLGLQTLELLAIENPEF
VVTRDDLLTYLIEVPFNSADDQLCLLSGKILLYYAETPETCDQLIAQSGF
KDGLLQLAYNPDPVLQSVVAKIILATLENCENRQDVLAVGIIEVLAYLHD
NCLDREAWEMAEKAIDTLHGYTMKIKKNGSLSDKPGSSDGSSSSGGPPST
LDSTDKKKL
Run BLAST on NCBI

transcript from alignment at sc0000616:142217..147973+

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00027321 ID=TCONS_00027321|Name=TCONS_00027321|organism=Clytia hemisphaerica|type=transcript|length=5757bp|location=Sequence derived from alignment at sc0000616:142217..147973+ (Clytia hemisphaerica)
AACAAGTTAATTACACCTGATGCTGACTATAACCCACCCATAGTAAATTA
AATTCTCTATCTTGTCTCGAGATTATAAAGTTGAATATTTCTTCATTTTA
TCAAAGATTCTCCGACCTAacggtcgaaggatgatgatgatcaaagattc
attgtttttatatttNGAAGCTCTCGCCGAACTTTTAACTGTCAGCCAAA
TTCAGGTATGTAAACTCTTAGTGGATCCTTCCAATTATTGAAAGCAACGC
CTTTGTACTTGTCACTTGAACCAATCCTTATCTGCCAACTGATGAGAAAG
AAAGATCATAATGTTGGCTTTACGGAATATATTCTCTGTTTAGGACCAGT
TCATTGAGATTGGAGGTGCCCGAACACTTTGCGCATTGTTGCATAGCAAC
AGTCAACGTTTAATGAATGAAGCAGTCATGGCAATCTCTTACATTGTTGC
TGATAGTGATACCAACAAGCATGCGTTGGTCGCTGAAGATGGGTAAGGGA
TGGAATAAAGTCTTGAAAACTGCTTGATCATTAGCTGTCATTAGAGATAC
TATGAGATTTTCTCTATCAAATTTAGATAGAAACTATAATCTTTCAGATA
TAAGATTAATCtttcaaattcttaaaaataaaaataaactaagaaaagaa
atcagttgttatctttgttttttattcagtttgtATGATTTGGCAAGTGC
TGCAAGAAAAGGTAATTTTACCTTTTTGGGTAGGTATTCTTCTGTGTTTA
ATTGTAAGGGGGATCACTTTGCagtttttcggaaaaaatcccCAATAGCA
TTTTTCTTTCCACAAAAgagccaaaaccttcattttccttggggtTTGTG
AGAAAATTACCCCAAAATCTTTTAATATTGACCCCCTCCCcgttttatgg
attttctcccACCTTATTCCACCCACCCCTacaattagtactagtaataa
catggtttagagggtgatttgggattaataaccccgaggttcattgaaaa
catttcaaaatagccagaacgtagtgagggctattttgaagtgttttcaa
tgaaacgagggaTTATTAATCCgaaatcacccgagaataccatgttattc
ctcgttaattatatggtcaaaaaaagaattgaagaacactcaacactcgc
tattcttttcgaaacttataaaaacattcgagactataaaaaaacattcg
actgacactcttattttgattggcttaaaaatttcgtacgatattttgtt
aaccaatcaaaatatcgtacgatacttttctttcaNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNggggggagagggggtttagcaaaagcgtacatta
TGAACGACAAGAAGCACGAATCCGTCAGTGGAGGCCAGCAGCCTAGATAG
CATTCGGATGGACATACATCCGAATCAATCTCAGATTCACAGGgaggggg
gcagctgggcaaaaggaccgacgggtatgtgcgggacctgagggtacctt
ttccaatatgtttaaaatgcactgtaagggtcggaaaaactagagatgca
ctgtaagggtagaaatttcagaaaattcttggaaaatctagatattttga
ccaaaaatgctagaattttgaccatttcttgcacgaaagggatcgaaaat
ttgggggaaaatgcactctaagggtatgattttcactgatttttgctgca
ctgtaagggtgcaattttaNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTGGTCTAGT
GTATAAAAAAGGTTCCATgaagaaattaaaataaataagaaaaaactctT
CCTGTAAAAAAGGTTTGTACGCCACGTAGCaaatttctttacttttctCA
TCGCTATCTTTTCGTTGCTTTTATAGCGCCTTCGCAAGCCGGTCAAATTA
TTGCTGGAATATATTTGGAGTTATCTTTTAACCCTGAAATACGCGCCCAA
CTTGCATCCGATTCTACTTCAGGTATGTACTATAAAAGGGTCGTGTGTAA
TACCATGGTCTTTATAACGTCTATATTTTGAAACTTGGGAAAAGTTTATC
AATTCGCCATAGATACCTTCATATTAGACTGAACTTCATTCAgcaatatt
ttttattgaacaTTTGTTAGGTGAGACAAGGGTATTTTTTTGTTGCTGCT
TATTATAATTTACGAATTCTGCAGTACGTGATTTTGATTCTTTGTTTCTT
GACTTGATATTTAAAGCTTCTGCACTGATCCATTTGATCAAATCAAAAGA
CGATGAAACAAAAAGACTTGGCCTACAAACATTGGAATTGCTCGCCATCG
AGAATCCTGAATTTGTTGTGACAAGGGTATGTTTTTTTTACTGACTTTGC
ACGTCATTTTAGCtgaggaatttttcaaaattaagtcccATGAATCCAGT
TAGAACATTCAGCAAAGTACTAAAAAAGATACTTTCTTGACAGAGGACTT
ACAAAGTATATCCTGTAGAAAATTGCCGGTCGTCAAAAATCGGTATCAGT
GTCTGAGAAAAAAGGAAGCTTGTCTCCAGCTCTAGGGAATTGTTTCCTTA
TTTCGATATTGTGTAATGTACGAACTGTTAGCACACTTTTTGGATAGCCC
TCAACTTAGCTGTGTGGTAGTATCTAGATgatcattttctatttttttct
ccCTGGTGTAGGATGATTTGTTGACCTATTTGATTGAAGTTCCATTCAAC
TCAGCAGATGACCAACTATGTCTCCTATCTGGAAAGATTTTACTCTATTA
CGCAGAGACACCTGAGGTATGGAGTTGTTTCTCTTACAGGAACTGttaaa
ttaatgtttttttttttatttgtaggGTAGGAATTCCTTTCTGTGaaact
ctttttttatataagaaatattGGGAAGGTCAACCGCGTCATTCATTAAG
TCCATGGAAAAGAATGATTACATCTCCTAATGTACCTTTAAGTATCTTTT
TATGCGTAATTGTAGGAAGTCGGTATCTACGGAGATTTATTCCTTAAAAC
AGGGGTTCTTAATTAGTTGGCTTTTAGGAAAACGacgattttggacaaaa
aatcgtAAAACAGGGAGGGTCATGAAAAATTAGAGTTGATATTTTGATCC
CCTATGATTAGCTGTAGAAGAGTAAACAACTAAATAGACTTTGGGTCGCA
GGTTTTGTAATACTTATTTCACTTTTACAGACATGTGATCAGCTGATTGC
CCAATCTGGTTTCAAGGACGGTTTGCTGCAACTAGCCTATAATCCAGACC
CTGTCCTTCAAAGTGTTGTTGCCAAAATCATTCTTGCTACATTGGAAAAT
TGTGAGAACAGGTAAACaccttgtctgtacacaaacccagtatctacggc
ttattTCAAGATTCATTGccgtactacgaagcgataaacgtgagatacac
tctggtacagagtagtaAACACTAGGTTTTGTTGCTTCAATTATGAATTA
TGTACTAAAACTTTCTAGCGTGActacaaaatttgaaatcaaatcaatga
agagcaaaatttggaaaatattatTCTTCTTTTCTTTACTAAACCCATTC
CCTAATTCCGATTATGACCTCGATCAATTCATCCCCTTACCCGTTGTGAG
cccctcccactggaaaaattggccaaaatatcgtttttgagcccactgaa
aataatcaaaataaacaaatagcaaaaaaatattgtgctattttttaccc
ccactggctgaaaaaaatcatacccCGTCCgtgagaagggagtgttttAA
CCAATTCTAAATTCTTTCTTCTTTGTATACAGACAAGACGTTTTAGCTGT
TGGCATCATAGAAGTATTGGCATATCTCCATGACAACTGCTTAGACCGTG
AAGCTTGGGAAATGGCAGAGAAAGCTATAGATACGTTGCATGGATACACA
ATGAAAATCAAGAAGAATGGTTCTCTTTCTGATAAGCCTGGATCTTCGGA
TGGCTCCAGTTCTTCTGGAGGACCTCCAAGTACGCTTGATTCCACTGATA
AAAAGAAATTATGAGACTCTCATCCTCCGTTTTCTGATGAGATATATTGA
CATGTTAGTCAGTGTTATTTTCCACCATAATGAGTGTTTAGAAATTTACG
CAATGATTGAACCTGGTTGAACCTTTGGTCTCAACCCTTGGTGTAAACCA
CTTATAATATAATTggccattatgatttttggacctacctggaggtccta
taaattaacctctgtccgttcgtccgtccgttcgtccgttcgtccgttcg
tccgtccgtctgttaccagcttttctcaggattggctcattagttttttc
tgatttttggcacaatgatgcaaaatggcaatgcccaaaatgtgacggag
cccgattttcgaaaaaaaatcatttccggccaaaattgccggaaatatgc
cggaaaaacctgttttttggcattttctcaagatttcatcattagatttt
tctgattttttgcacaaagatgcgtattagcaatgcccaaaacttggccg
agtccga

Coding sequence (CDS) from alignment at sc0000616:142217..147973+

>TCONS_00027321 ID=TCONS_00027321|Name=TCONS_00027321|organism=Clytia hemisphaerica|type=CDS|length=7440bp|location=Sequence derived from alignment at sc0000616:142217..147973+ (Clytia hemisphaerica)
atgatgatgatcaaagattcattgtttttatatttNGAAGCTCTCGCCGA
ACTTTTAACTGTCAGCCAAATTCAGGACCAGTTCATTGAGATTGGAGGTG
CCCGAACACTTTGCGCATTGTTGCATAGCAACAGTCAACGTTTAATGAAT
GAAGCAGTCATGGCAATCTCTTACATTGTTGCTGATAGTGATACCAACAA
GCATGCGTTGGTCGCTGAAGATGGtttgtATGATTTGGCAAGTGCTGCAA
GAAAAGCGCCTTCGCAAGCCGGTCAAATTATTGCTGGAATATATTTGGAG
TTATCTTTTAACCCTGAAATACGCGCCCAACTTGCATCCGATTCTACTTC
AGCTTCTGCACTGATCCATTTGATCAAATCAAAAGACGATGAAACAAAAA
GACTTGGCCTACAAACATTGGAATTGCTCGCCATCGAGAATCCTGAATTT
GTTGTGACAAGGGATGATTTGTTGACCTATTTGATTGAAGTTCCATTCAA
CTCAGCAGATGACCAACTATGTCTCCTATCTGGAAAGATTTTACTCTATT
ACGCAGAGACACCTGAGACATGTGATCAGCTGATTGCCCAATCTGGTTTC
AAGGACGGTTTGCTGCAACTAGCCTATAATCCAGACCCTGTCCTTCAAAG
TGTTGTTGCCAAAATCATTCTTGCTACATTGGAAAATTGTGAGAACAGAC
AAGACGTTTTAGCTGTTGGCATCATAGAAGTATTGGCATATCTCCATGAC
AACTGCTTAGACCGTGAAGCTTGGGAAATGGCAGAGAAAGCTATAGATAC
GTTGCATGGATACACAATGAAAATCAAGAAGAATGGTTCTCTTTCTGATA
AGCCTGGATCTTCGGATGGCTCCAGTTCTTCTGGAGGACCTCCAAGTACG
CTTGATTCCACTGATAAAAAGAAATTATGAatgatgatgatcaaagattc
attgtttttatatttNGAAGCTCTCGCCGAACTTTTAACTGTCAGCCAAA
TTCAGGACCAGTTCATTGAGATTGGAGGTGCCCGAACACTTTGCGCATTG
TTGCATAGCAACAGTCAACGTTTAATGAATGAAGCAGTCATGGCAATCTC
TTACATTGTTGCTGATAGTGATACCAACAAGCATGCGTTGGTCGCTGAAG
ATGGtttgtATGATTTGGCAAGTGCTGCAAGAAAAGCGCCTTCGCAAGCC
GGTCAAATTATTGCTGGAATATATTTGGAGTTATCTTTTAACCCTGAAAT
ACGCGCCCAACTTGCATCCGATTCTACTTCAGCTTCTGCACTGATCCATT
TGATCAAATCAAAAGACGATGAAACAAAAAGACTTGGCCTACAAACATTG
GAATTGCTCGCCATCGAGAATCCTGAATTTGTTGTGACAAGGGATGATTT
GTTGACCTATTTGATTGAAGTTCCATTCAACTCAGCAGATGACCAACTAT
GTCTCCTATCTGGAAAGATTTTACTCTATTACGCAGAGACACCTGAGACA
TGTGATCAGCTGATTGCCCAATCTGGTTTCAAGGACGGTTTGCTGCAACT
AGCCTATAATCCAGACCCTGTCCTTCAAAGTGTTGTTGCCAAAATCATTC
TTGCTACATTGGAAAATTGTGAGAACAGACAAGACGTTTTAGCTGTTGGC
ATCATAGAAGTATTGGCATATCTCCATGACAACTGCTTAGACCGTGAAGC
TTGGGAAATGGCAGAGAAAGCTATAGATACGTTGCATGGATACACAATGA
AAATCAAGAAGAATGGTTCTCTTTCTGATAAGCCTGGATCTTCGGATGGC
TCCAGTTCTTCTGGAGGACCTCCAAGTACGCTTGATTCCACTGATAAAAA
GAAATTATGAatgatgatgatcaaagattcattgtttttatatttNGAAG
CTCTCGCCGAACTTTTAACTGTCAGCCAAATTCAGGACCAGTTCATTGAG
ATTGGAGGTGCCCGAACACTTTGCGCATTGTTGCATAGCAACAGTCAACG
TTTAATGAATGAAGCAGTCATGGCAATCTCTTACATTGTTGCTGATAGTG
ATACCAACAAGCATGCGTTGGTCGCTGAAGATGGtttgtATGATTTGGCA
AGTGCTGCAAGAAAAGCGCCTTCGCAAGCCGGTCAAATTATTGCTGGAAT
ATATTTGGAGTTATCTTTTAACCCTGAAATACGCGCCCAACTTGCATCCG
ATTCTACTTCAGCTTCTGCACTGATCCATTTGATCAAATCAAAAGACGAT
GAAACAAAAAGACTTGGCCTACAAACATTGGAATTGCTCGCCATCGAGAA
TCCTGAATTTGTTGTGACAAGGGATGATTTGTTGACCTATTTGATTGAAG
TTCCATTCAACTCAGCAGATGACCAACTATGTCTCCTATCTGGAAAGATT
TTACTCTATTACGCAGAGACACCTGAGACATGTGATCAGCTGATTGCCCA
ATCTGGTTTCAAGGACGGTTTGCTGCAACTAGCCTATAATCCAGACCCTG
TCCTTCAAAGTGTTGTTGCCAAAATCATTCTTGCTACATTGGAAAATTGT
GAGAACAGACAAGACGTTTTAGCTGTTGGCATCATAGAAGTATTGGCATA
TCTCCATGACAACTGCTTAGACCGTGAAGCTTGGGAAATGGCAGAGAAAG
CTATAGATACGTTGCATGGATACACAATGAAAATCAAGAAGAATGGTTCT
CTTTCTGATAAGCCTGGATCTTCGGATGGCTCCAGTTCTTCTGGAGGACC
TCCAAGTACGCTTGATTCCACTGATAAAAAGAAATTATGAatgatgatga
tcaaagattcattgtttttatatttNGAAGCTCTCGCCGAACTTTTAACT
GTCAGCCAAATTCAGGACCAGTTCATTGAGATTGGAGGTGCCCGAACACT
TTGCGCATTGTTGCATAGCAACAGTCAACGTTTAATGAATGAAGCAGTCA
TGGCAATCTCTTACATTGTTGCTGATAGTGATACCAACAAGCATGCGTTG
GTCGCTGAAGATGGtttgtATGATTTGGCAAGTGCTGCAAGAAAAGCGCC
TTCGCAAGCCGGTCAAATTATTGCTGGAATATATTTGGAGTTATCTTTTA
ACCCTGAAATACGCGCCCAACTTGCATCCGATTCTACTTCAGCTTCTGCA
CTGATCCATTTGATCAAATCAAAAGACGATGAAACAAAAAGACTTGGCCT
ACAAACATTGGAATTGCTCGCCATCGAGAATCCTGAATTTGTTGTGACAA
GGGATGATTTGTTGACCTATTTGATTGAAGTTCCATTCAACTCAGCAGAT
GACCAACTATGTCTCCTATCTGGAAAGATTTTACTCTATTACGCAGAGAC
ACCTGAGACATGTGATCAGCTGATTGCCCAATCTGGTTTCAAGGACGGTT
TGCTGCAACTAGCCTATAATCCAGACCCTGTCCTTCAAAGTGTTGTTGCC
AAAATCATTCTTGCTACATTGGAAAATTGTGAGAACAGACAAGACGTTTT
AGCTGTTGGCATCATAGAAGTATTGGCATATCTCCATGACAACTGCTTAG
ACCGTGAAGCTTGGGAAATGGCAGAGAAAGCTATAGATACGTTGCATGGA
TACACAATGAAAATCAAGAAGAATGGTTCTCTTTCTGATAAGCCTGGATC
TTCGGATGGCTCCAGTTCTTCTGGAGGACCTCCAAGTACGCTTGATTCCA
CTGATAAAAAGAAATTATGAatgatgatgatcaaagattcattgttttta
tatttNGAAGCTCTCGCCGAACTTTTAACTGTCAGCCAAATTCAGGACCA
GTTCATTGAGATTGGAGGTGCCCGAACACTTTGCGCATTGTTGCATAGCA
ACAGTCAACGTTTAATGAATGAAGCAGTCATGGCAATCTCTTACATTGTT
GCTGATAGTGATACCAACAAGCATGCGTTGGTCGCTGAAGATGGtttgtA
TGATTTGGCAAGTGCTGCAAGAAAAGCGCCTTCGCAAGCCGGTCAAATTA
TTGCTGGAATATATTTGGAGTTATCTTTTAACCCTGAAATACGCGCCCAA
CTTGCATCCGATTCTACTTCAGCTTCTGCACTGATCCATTTGATCAAATC
AAAAGACGATGAAACAAAAAGACTTGGCCTACAAACATTGGAATTGCTCG
CCATCGAGAATCCTGAATTTGTTGTGACAAGGGATGATTTGTTGACCTAT
TTGATTGAAGTTCCATTCAACTCAGCAGATGACCAACTATGTCTCCTATC
TGGAAAGATTTTACTCTATTACGCAGAGACACCTGAGACATGTGATCAGC
TGATTGCCCAATCTGGTTTCAAGGACGGTTTGCTGCAACTAGCCTATAAT
CCAGACCCTGTCCTTCAAAGTGTTGTTGCCAAAATCATTCTTGCTACATT
GGAAAATTGTGAGAACAGACAAGACGTTTTAGCTGTTGGCATCATAGAAG
TATTGGCATATCTCCATGACAACTGCTTAGACCGTGAAGCTTGGGAAATG
GCAGAGAAAGCTATAGATACGTTGCATGGATACACAATGAAAATCAAGAA
GAATGGTTCTCTTTCTGATAAGCCTGGATCTTCGGATGGCTCCAGTTCTT
CTGGAGGACCTCCAAGTACGCTTGATTCCACTGATAAAAAGAAATTATGA
atgatgatgatcaaagattcattgtttttatatttNGAAGCTCTCGCCGA
ACTTTTAACTGTCAGCCAAATTCAGGACCAGTTCATTGAGATTGGAGGTG
CCCGAACACTTTGCGCATTGTTGCATAGCAACAGTCAACGTTTAATGAAT
GAAGCAGTCATGGCAATCTCTTACATTGTTGCTGATAGTGATACCAACAA
GCATGCGTTGGTCGCTGAAGATGGtttgtATGATTTGGCAAGTGCTGCAA
GAAAAGCGCCTTCGCAAGCCGGTCAAATTATTGCTGGAATATATTTGGAG
TTATCTTTTAACCCTGAAATACGCGCCCAACTTGCATCCGATTCTACTTC
AGCTTCTGCACTGATCCATTTGATCAAATCAAAAGACGATGAAACAAAAA
GACTTGGCCTACAAACATTGGAATTGCTCGCCATCGAGAATCCTGAATTT
GTTGTGACAAGGGATGATTTGTTGACCTATTTGATTGAAGTTCCATTCAA
CTCAGCAGATGACCAACTATGTCTCCTATCTGGAAAGATTTTACTCTATT
ACGCAGAGACACCTGAGACATGTGATCAGCTGATTGCCCAATCTGGTTTC
AAGGACGGTTTGCTGCAACTAGCCTATAATCCAGACCCTGTCCTTCAAAG
TGTTGTTGCCAAAATCATTCTTGCTACATTGGAAAATTGTGAGAACAGAC
AAGACGTTTTAGCTGTTGGCATCATAGAAGTATTGGCATATCTCCATGAC
AACTGCTTAGACCGTGAAGCTTGGGAAATGGCAGAGAAAGCTATAGATAC
GTTGCATGGATACACAATGAAAATCAAGAAGAATGGTTCTCTTTCTGATA
AGCCTGGATCTTCGGATGGCTCCAGTTCTTCTGGAGGACCTCCAAGTACG
CTTGATTCCACTGATAAAAAGAAATTATGAatgatgatgatcaaagattc
attgtttttatatttNGAAGCTCTCGCCGAACTTTTAACTGTCAGCCAAA
TTCAGGACCAGTTCATTGAGATTGGAGGTGCCCGAACACTTTGCGCATTG
TTGCATAGCAACAGTCAACGTTTAATGAATGAAGCAGTCATGGCAATCTC
TTACATTGTTGCTGATAGTGATACCAACAAGCATGCGTTGGTCGCTGAAG
ATGGtttgtATGATTTGGCAAGTGCTGCAAGAAAAGCGCCTTCGCAAGCC
GGTCAAATTATTGCTGGAATATATTTGGAGTTATCTTTTAACCCTGAAAT
ACGCGCCCAACTTGCATCCGATTCTACTTCAGCTTCTGCACTGATCCATT
TGATCAAATCAAAAGACGATGAAACAAAAAGACTTGGCCTACAAACATTG
GAATTGCTCGCCATCGAGAATCCTGAATTTGTTGTGACAAGGGATGATTT
GTTGACCTATTTGATTGAAGTTCCATTCAACTCAGCAGATGACCAACTAT
GTCTCCTATCTGGAAAGATTTTACTCTATTACGCAGAGACACCTGAGACA
TGTGATCAGCTGATTGCCCAATCTGGTTTCAAGGACGGTTTGCTGCAACT
AGCCTATAATCCAGACCCTGTCCTTCAAAGTGTTGTTGCCAAAATCATTC
TTGCTACATTGGAAAATTGTGAGAACAGACAAGACGTTTTAGCTGTTGGC
ATCATAGAAGTATTGGCATATCTCCATGACAACTGCTTAGACCGTGAAGC
TTGGGAAATGGCAGAGAAAGCTATAGATACGTTGCATGGATACACAATGA
AAATCAAGAAGAATGGTTCTCTTTCTGATAAGCCTGGATCTTCGGATGGC
TCCAGTTCTTCTGGAGGACCTCCAAGTACGCTTGATTCCACTGATAAAAA
GAAATTATGAatgatgatgatcaaagattcattgtttttatatttNGAAG
CTCTCGCCGAACTTTTAACTGTCAGCCAAATTCAGGACCAGTTCATTGAG
ATTGGAGGTGCCCGAACACTTTGCGCATTGTTGCATAGCAACAGTCAACG
TTTAATGAATGAAGCAGTCATGGCAATCTCTTACATTGTTGCTGATAGTG
ATACCAACAAGCATGCGTTGGTCGCTGAAGATGGtttgtATGATTTGGCA
AGTGCTGCAAGAAAAGCGCCTTCGCAAGCCGGTCAAATTATTGCTGGAAT
ATATTTGGAGTTATCTTTTAACCCTGAAATACGCGCCCAACTTGCATCCG
ATTCTACTTCAGCTTCTGCACTGATCCATTTGATCAAATCAAAAGACGAT
GAAACAAAAAGACTTGGCCTACAAACATTGGAATTGCTCGCCATCGAGAA
TCCTGAATTTGTTGTGACAAGGGATGATTTGTTGACCTATTTGATTGAAG
TTCCATTCAACTCAGCAGATGACCAACTATGTCTCCTATCTGGAAAGATT
TTACTCTATTACGCAGAGACACCTGAGACATGTGATCAGCTGATTGCCCA
ATCTGGTTTCAAGGACGGTTTGCTGCAACTAGCCTATAATCCAGACCCTG
TCCTTCAAAGTGTTGTTGCCAAAATCATTCTTGCTACATTGGAAAATTGT
GAGAACAGACAAGACGTTTTAGCTGTTGGCATCATAGAAGTATTGGCATA
TCTCCATGACAACTGCTTAGACCGTGAAGCTTGGGAAATGGCAGAGAAAG
CTATAGATACGTTGCATGGATACACAATGAAAATCAAGAAGAATGGTTCT
CTTTCTGATAAGCCTGGATCTTCGGATGGCTCCAGTTCTTCTGGAGGACC
TCCAAGTACGCTTGATTCCACTGATAAAAAGAAATTATGA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_015377XLOC_015377Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00027321-exon-sc0000616-1491911889:142217..142421TCONS_00027321-exon-sc0000616-1491911889:142217..142421Clytia hemisphaericaexon
TCONS_00027321-exon-sc0000616-1510915933:142217..142421TCONS_00027321-exon-sc0000616-1510915933:142217..142421Clytia hemisphaericaexon
TCONS_00027321-exon-sc0000616-1575043694:142217..142421TCONS_00027321-exon-sc0000616-1575043694:142217..142421Clytia hemisphaericaexon
TCONS_00027321-exon-sc0000616-1491911889:142560..142708TCONS_00027321-exon-sc0000616-1491911889:142560..142708Clytia hemisphaericaexon
TCONS_00027321-exon-sc0000616-1510915933:142560..142708TCONS_00027321-exon-sc0000616-1510915933:142560..142708Clytia hemisphaericaexon
TCONS_00027321-exon-sc0000616-1575043694:142560..142708TCONS_00027321-exon-sc0000616-1575043694:142560..142708Clytia hemisphaericaexon
TCONS_00027321-exon-sc0000616-1491911889:142896..142927TCONS_00027321-exon-sc0000616-1491911889:142896..142927Clytia hemisphaericaexon
TCONS_00027321-exon-sc0000616-1510915933:142896..142927TCONS_00027321-exon-sc0000616-1510915933:142896..142927Clytia hemisphaericaexon
TCONS_00027321-exon-sc0000616-1575043694:142896..142927TCONS_00027321-exon-sc0000616-1575043694:142896..142927Clytia hemisphaericaexon
TCONS_00027321-exon-sc0000616-1491911889:145343..145438TCONS_00027321-exon-sc0000616-1491911889:145343..145438Clytia hemisphaericaexon
TCONS_00027321-exon-sc0000616-1510915933:145343..145438TCONS_00027321-exon-sc0000616-1510915933:145343..145438Clytia hemisphaericaexon
TCONS_00027321-exon-sc0000616-1575043694:145343..145438TCONS_00027321-exon-sc0000616-1575043694:145343..145438Clytia hemisphaericaexon
TCONS_00027321-exon-sc0000616-1491911889:145683..145792TCONS_00027321-exon-sc0000616-1491911889:145683..145792Clytia hemisphaericaexon
TCONS_00027321-exon-sc0000616-1510915933:145683..145792TCONS_00027321-exon-sc0000616-1510915933:145683..145792Clytia hemisphaericaexon
TCONS_00027321-exon-sc0000616-1575043694:145683..145792TCONS_00027321-exon-sc0000616-1575043694:145683..145792Clytia hemisphaericaexon
TCONS_00027321-exon-sc0000616-1491911889:146128..146232TCONS_00027321-exon-sc0000616-1491911889:146128..146232Clytia hemisphaericaexon
TCONS_00027321-exon-sc0000616-1510915933:146128..146232TCONS_00027321-exon-sc0000616-1510915933:146128..146232Clytia hemisphaericaexon
TCONS_00027321-exon-sc0000616-1575043694:146128..146232TCONS_00027321-exon-sc0000616-1575043694:146128..146232Clytia hemisphaericaexon
TCONS_00027321-exon-sc0000616-1491911889:146647..146777TCONS_00027321-exon-sc0000616-1491911889:146647..146777Clytia hemisphaericaexon
TCONS_00027321-exon-sc0000616-1510915933:146647..146777TCONS_00027321-exon-sc0000616-1510915933:146647..146777Clytia hemisphaericaexon
TCONS_00027321-exon-sc0000616-1575043694:146647..146777TCONS_00027321-exon-sc0000616-1575043694:146647..146777Clytia hemisphaericaexon
TCONS_00027321-exon-sc0000616-1491911889:147249..147973TCONS_00027321-exon-sc0000616-1491911889:147249..147973Clytia hemisphaericaexon
TCONS_00027321-exon-sc0000616-1510915933:147249..147973TCONS_00027321-exon-sc0000616-1510915933:147249..147973Clytia hemisphaericaexon
TCONS_00027321-exon-sc0000616-1575043694:147249..147973TCONS_00027321-exon-sc0000616-1575043694:147249..147973Clytia hemisphaericaexon
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00027321-proteinTCONS_00027321-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000616supercontigsc0000616:142217..147973 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
5.36129	5.23842	8.30169	9.93945	47.2928	35.9311	39.9735	37.8515	50.5668	44.3971	41.9774	50.9665	17.7074	17.165	11.1278	10.9914	13.1656	11.9267	41.4346	43.1686	19.3187	18.5488	12.309	13.2042	16.6177	19.1823	14.8672	15.7921	11.3364	9.6837
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR011989ARM-like
IPR016024ARM-type_fold
Vocabulary: Molecular Function
TermDefinition
GO:0005488binding
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005488 binding
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00027321 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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