TCONS_00027255 (transcript) - C. hemisphaerica

Overview
NameTCONS_00027255
Unique NameTCONS_00027255
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length119

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00027255 ID=TCONS_00027255|Name=TCONS_00027255|organism=Clytia hemisphaerica|type=transcript|length=119bp
AAgtaaaaaaactcattttggGATTTTAATATTTCATCGTTTTCCAAGCC
AGCCTCTACCGCTTCTTCGGTTTCCACTCCGTCGGTTTCTTAGGTTTCGT
CTCCCTGACAATCGGCGAT
Run BLAST on NCBI

transcript from alignment at sc0000611:162334..162452

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00027255 ID=TCONS_00027255|Name=TCONS_00027255|organism=Clytia hemisphaerica|type=transcript|length=119bp|location=Sequence derived from alignment at sc0000611:162334..162452 (Clytia hemisphaerica)
ATCGCCGATTGTCAGGGAGACGAAACCTAAGAAACCGACGGAGTGGAAAC
CGAAGAAGCGGTAGAGGCTGGCTTGGAAAACGATGAAATATTAAAATCcc
aaaatgagtttttttacTT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_015334XLOC_015334Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00027255-exon-sc0000611-1491911889:162334..162452TCONS_00027255-exon-sc0000611-1491911889:162334..162452Clytia hemisphaericaexon
TCONS_00027255-exon-sc0000611-1510915933:162334..162452TCONS_00027255-exon-sc0000611-1510915933:162334..162452Clytia hemisphaericaexon
TCONS_00027255-exon-sc0000611-1575043694:162334..162452TCONS_00027255-exon-sc0000611-1575043694:162334..162452Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000611supercontigsc0000611:162334..162452 .
Expression
No biomaterial libraries express this feature.
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00027255 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
back to top