TCONS_00027020 (transcript) - C. hemisphaerica

Overview
NameTCONS_00027020
Unique NameTCONS_00027020
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length3155

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00027020 ID=TCONS_00027020|Name=TCONS_00027020|organism=Clytia hemisphaerica|type=transcript|length=3155bp
AGATGagatacaaaaatatcaaagcaAAATTATGACCGTTGATAAATCTT
TCGAAATTGAAGCATTAGTTTGTTTCTTGGtttggtttgaaaaaaatatc
ttcGATATAACATTACACTACTTTGTATGAAATATTGTATCGGTATACCT
TGGTTATAAATTTCTGGAACAAGGGAAGCTTTTTTGTGATTGATAAAACT
AAGTAAAAACATTTTGGCactacttttgaagaataaatcGTTTTCTAAAG
TAGACAGGCATACATAATATGGTTATTGCCACAAAGAGAAAGATCACCAA
GATATTCCTCATATTTTTGGTCTGTGTTATCGCACTGAATATTTTTTACT
ACGATTACCAAATATGCAGGAAAGCTCAATCGTCGTCCAATAGTATCTTC
TGTCTGGTGGTATCAAGATATGTCAAAGTACGAAGTCAAGGACTTGGCAA
TGCTTTAAATGTAACTGGTATTGTAAACAATATCCGAAAACCAGTTAAAG
ATTACTTGAAAACACAACACCTTGATTTAATCTTGAAAAAGGAGATCTTA
AATGGATCTTTAGAGTCACCAAAAGTCTCAACATTGAGTCCCACAATGGG
AGTAAAAACTATTACTAAAGACACAAGGCAGGCTGAAAAATTAACACCTA
AAAATGAAGCAAGAACAGAGAAGGAAGTTGAAACAGATCTTAAGAATACC
TCACCAGTGATGACAACCACCTCAACGACAACTACGACCAGCCCAACGAC
GACAACAACGACTAACCCAcccacaacaacgaccaccccacTCACAAAAA
CGACCACTTCAacgacaacaacgaccaccccaccaacaacaacgaccacc
caacccacaacaacgaccacccaacccacaacaacgaccactccacCAAC
CACAACAACGACCCTCGCGATAACATTATCAACTGAACAACTTACAACTC
CAACCATAAACAACACTTTAAAATGTCGTATCCCAAAACTGGATCCTTTC
CATCGTGAAGTCATGCCATACGTCCGTTGGAACTGGATTAATGATACTTG
CAAAATAAAGCAGGAGAAAAGCAGAGTTGAGAATGGAAAATTGATTGTGA
ATCTAGAAAATGTTGTTGAAGTCAATTTGAACTATATCATACGTGTAGAC
GATTACGCAAACAAATTGGAGAAGCATCTCATTTATAACAAGAATGTCAG
TAATAATGTAAAAGagcTTTCATACAAACTCGAGCATGATTTTATGAAAG
TTGACATCAGAGAAGCTAATAAAAAACCCATATCCGAATACCACATGTAT
CCGGTTAAAAAACCAAATCCAGAAGGACCAGAATTCCGGAAATATGATCC
CGGTAAAAGTCAATTCAATATCATGATGATTATGTTGGATTCAGTATCTC
ACGCATGCGCGCAACGTTATATACCGAAAACGTACAAATTTCTTCAGAAC
AACCCTTATACTACGATTATGGAgGGTCACACGATTGTTGGTGATGCTAC
CACACCTCAACTATGTGCAACGTTCTTCGGCGATCAACCAGAAAATTTGA
AACCAGAAGGACGCCGAGGATTCCGAGGAGCTGAGACTATCGACAAATGG
CCATCCCTACTCAAAGATTTGGTGAAAGATGGATATGCTACTATGCATTC
TGAAGATGAGCCATTTATTAATTCGTTTAATTTTCGTTTACATGGTTTTA
AGAAGCAACCGACTTTGAAGTATCTTCGGCCGTGGTGGAGGGAGTCAAAT
GATTTGCGAAAAATTAAATATTGGCGTTCAAACTCTTGCCCAATAAACTT
TGCGATGGATTATACTAAAAACTTCTATAAAGAGTACTCAGAAGAGTTAA
GTGCAGTATTTTTAATGAACTCTGCTCTCACTCATAATGAACCGGAGCGT
GTTCAAATGCTTGATAATGGCTTTATAAAATTCTTTCAATATTTAAATGA
ATCGAAAAGATTGGAATCTACTGCCGTTATTTTCTTCGGCGATCATGGTA
TGAGAGAAGGTGGGTTTAGGTCCACTATACAAGGCAAGCTTGAAGAACGT
CTGCCTTTTATGACCATTACTCTACCACCAATCTTCTACCAAAGACATCC
AGAGTTAGTCAAAAATCTTCAACGAAATTCAAAAGCCTTAACAACGCCTT
ATGATATACATGCAACTCTAAAACATTTGATTCAGTTCACAAGCGGAGAG
ATACCAAAACATAAATTTGGTCGTAGTTTATTTACAAATATTGTATCTTT
GAATCGAGAATGTGGTGAAGCTGGAGTTACACCCTTCTGGTGTGTTTGTA
GGAATTTTGCACCTGTTAAAAACTTGAATGATCCAACTGTTCGAGAAATT
GCCACCGCAATTACAAACAGTATTAACGAGGTAGTCTTCAAGAACGAGAT
TGCTAAGCCACAATGCCAAACGTTATCTTTAGATCAAATTCATAGAGCCA
GTAAGATGATACGAGCTGCCAAAGACGATGGAGCTTTTCAGTCTTACGAG
TTAGTCTTAAAATTGAAACCATGTGGGGGACTTTTTGAGGCAACAGCAGA
ATATGATATTAAAAATAAGAAAGTCAATGTTGGAAAAAACTTTAGTAGAA
TTAATTTATATAGAGATCAACCGAAATGTATTCAACAACAATTTCCGTAT
TTGAGGAAATTTTGCTGTTGTAATGGACAattctaatatttttattttta
ttattttcaaaatatattcgTTTTCAAATATGAGAAACACATATTAATTT
TAACTTAGCTACAAATCTGTTCcagtttataaattttttttttgtaaata
ctcCCTGAGAAATATCAtttcgttaaattcgcgaatatcagatttcaaat
tattttgtaGGAATTAAAATCCATTCACTTTAAATGTGCACTAACCTCTG
GTTAAAATGAACTTTTATCATTTGGAGCtagcatgaacatataaacgact
ggacatccatctcctttgtctttttgtagaaaggactgctagcttcgttg
ccgcctcgttaaaagcataaaatgaaacaatagattttgatgatatacca
cttgggaatacgttgctaacaacgtcaaaacttcgacaaaagtctctgtt
gttctactcttctcaagtcttttatctatatcataacaaagataacagag
gcaaa
Run BLAST on NCBI

protein sequence of TCONS_00027020-protein

>TCONS_00027020-protein ID=TCONS_00027020-protein|Name=TCONS_00027020-protein|organism=Clytia hemisphaerica|type=polypeptide|length=805bp
MVIATKRKITKIFLIFLVCVIALNIFYYDYQICRKAQSSSNSIFCLVVSR
YVKVRSQGLGNALNVTGIVNNIRKPVKDYLKTQHLDLILKKEILNGSLES
PKVSTLSPTMGVKTITKDTRQAEKLTPKNEARTEKEVETDLKNTSPVMTT
TSTTTTTSPTTTTTTNPPTTTTTPLTKTTTSTTTTTTPPTTTTTQPTTTT
TQPTTTTTPPTTTTTLAITLSTEQLTTPTINNTLKCRIPKLDPFHREVMP
YVRWNWINDTCKIKQEKSRVENGKLIVNLENVVEVNLNYIIRVDDYANKL
EKHLIYNKNVSNNVKELSYKLEHDFMKVDIREANKKPISEYHMYPVKKPN
PEGPEFRKYDPGKSQFNIMMIMLDSVSHACAQRYIPKTYKFLQNNPYTTI
MEGHTIVGDATTPQLCATFFGDQPENLKPEGRRGFRGAETIDKWPSLLKD
LVKDGYATMHSEDEPFINSFNFRLHGFKKQPTLKYLRPWWRESNDLRKIK
YWRSNSCPINFAMDYTKNFYKEYSEELSAVFLMNSALTHNEPERVQMLDN
GFIKFFQYLNESKRLESTAVIFFGDHGMREGGFRSTIQGKLEERLPFMTI
TLPPIFYQRHPELVKNLQRNSKALTTPYDIHATLKHLIQFTSGEIPKHKF
GRSLFTNIVSLNRECGEAGVTPFWCVCRNFAPVKNLNDPTVREIATAITN
SINEVVFKNEIAKPQCQTLSLDQIHRASKMIRAAKDDGAFQSYELVLKLK
PCGGLFEATAEYDIKNKKVNVGKNFSRINLYRDQPKCIQQQFPYLRKFCC
CNGQF
Run BLAST on NCBI

transcript from alignment at sc0000600:93375..98293-

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00027020 ID=TCONS_00027020|Name=TCONS_00027020|organism=Clytia hemisphaerica|type=transcript|length=4919bp|location=Sequence derived from alignment at sc0000600:93375..98293- (Clytia hemisphaerica)
AGATGAGATACAAAAATATCAAAGCAAAATTATGACCGTTGATAAATCTT TCGAAATTGAAGCATTAGTTTGTTTCTTGGTTTGGTTTGAAAAAAATATC TTCGATATAACATTACACTACTTTGTATGAAATATTGTATCGGTATACCT TGGTTATAAATTTCTGGAACAAGGGAAGCTTTTTTGTGATTGATAAAACT AAGTAAAAACATTTTGGCACTACTTTTGAAGAATAAATCGTTTTCTAAAG TAGACAGGCATACATAATATGGTTATTGCCACAAAGAGAAAGATCACCAA GATATTCCTCATATTTTTGGTCTGTGTTATCGCACTGAATATTTTTTACT ACGATTACCAAATATGCAGGAAAGCTCAATCGTCGTCCAATAGTATCTTC TGTCTGGTGGTATCAAGATATGTCAAAGTACGAAGTCAAGGACTTGGCAA TGCTTTAAATGTAACTGGTATTGTAAACAATATCCGAAAACCAGTTAAAG ATTACTTGAAAACACAACACCTTGATTTAATCTTGAAAAAGGAGATCTTA AATGGATCTTTAGAGTCACCAAAAGTCTCAACATTGAGTCCCACAATGGG AGTAAAAACTATTACTAAAGACACAAGGCAGGCTGAAAAATTAACACCTA AAAATGAAGCAAGAACAGAGAAGGAAGTTGAAACAGATCTTAAGAATACC TCACCAGTGATGACAACCACCTCAACGACAACTACGACCAGCCCAACGAC GACAACAACGACTAACCCACCCACAACAACGACCACCCCACTCACAAAAA CGACCACTTCAACGACAACAACGACCACCCCACCAACAACAACGACCACC CAACCCACAACAACGACCACCCAACCCACAACAACGACCACTCCACCAAC CACAACAACGACCCTCGCGATAACATTATCAACTGAACAACTTACAACTC CAACCATAAACAACACTTTAAAATGTCGTATCCCAAAACTGGATCCTTTC CATCGTGAAGTCATGCCATACGTCCGTTGGAACTGGATTAATGATACTTG CAAAATAAAGCAGGAGAAAAGCAGAGTTGAGAATGGAAAATTGATTGTGA ATCTAGAAAATGTTGTTGAAGTCAATTTGAACTATATCATACGTGTAGAC GATTACGCAAACAAATTGGAGAAGCATCTCATTTATAACAAGAATGTCAG TAATAATGTAAAAGGTATATTTGCAAAATTGAAAACTTTGAAGGCCTAGT AATTGAAATAGTGTCAATCCACCCATCCCAACAAAGGGCCCTAATAGTGT CACAATAGAAATATGAGGTGGGAAAATTACCATGAATTTCATAGAAAACT ACGCTGAAGTCTCAACCCATATAGGAGAGGGTCTATAAAGAGATAGTTCA GTTGTAAACATATTTGTGAAGAAATTCAAAGAATTTCTGTCCAACTATCT TCTTTCAGAAGATTTGGGTGGCAGAGCAGCATATGCATTTCGTCCTTATT AGGATCGTCAGCACTGCATACTACCACTATATATAGTATATATATATATA ATGCGCGAGTGCGACTTTTTGACATCGCGAAAAACGTGATCTTACTTTTA GTATTTCTTATAATTACGATAGCCATTACTGGCATAGGCAGTTTTAGACC CTGTCGAACTTATCAGATGAAGAGATTTGTAATTGTAATTTCATTGTTTT TTAACGAGCGTTGCATATTTCCCACGTACTTGCTCTAGTTTCTGGAATCC GCCAGTGACTGGCACAGTCAGCGGGAAAAACCTCCATGCTTTTGCAGCCA TAACTTGAATTTCCAAAATTACCCAAAATGTGATACTGTACAGTATACTG GTATTTCAAATTTTTTTTTTTAGAGCTTTCATACAAACTCGAGCATGATT TTATGAAAGTTGACATCAGAGAAGCTAATAAAAAACCCATATCCGAATAC CACATGTATCCGGTTAAAAAACCAAATCCAGAAGGACCAGAATTCCGGAA ATATGATCCCGGTAAAAGTCAATTCAATATCATGATGATTATGTTGGATT CAGTATCTCACGCATGCGCGCAACGTTATATACCGAAAACGTACAAATTT CTTCAGAACAACCCTTATACTACGATTATGGAGGTAAGGCGAAAATAAAA AAATGTATTGTTTCCGGAATGCGGGTGAAGGAAAAAAGCTTTCATGCAGC CGGCCGGAAAAATATTATTTTTGCTTTTTTTTTTGATAACTTAAGATCAT TGAAATAGAAATTTAAAGATAACTTTTATGTAGAAACAGTATGAAGTAAG CTCTGAATACTAATGTATCAATACTAACGAACAAAAATTGATTTACACGC GGGAATATCTAACCAAATGGCCTTTGATAGCTTGAACGGTCAACTTGATT TTCTTTATGATGAACCATATAGATGAGAAAGAAATTGAGAAATAGAAAGA AATCCATATTTGTTTCATTCACCAAAAAAGTAAAGATTTATCTTATCTTG ACAATAGTGACATTGTTGAAGTTTGGACTGGTTCGAGAACAAAGGAATTC AAACACCCAGCCATAAAAATATTGGAATATCAATCCCCATCGAGTTTTGG TCCATTACTTTCACCCCCACCGGCTGAAAAAATTCTACCGGGTCTGTGAG AAGGGAGTGTTTTATACCTTTCTATATTAGGTTTCAATTAAAACAGCTTG ATTAAAGTCTCTTTTTGGAACTCACTGCAAATGCCGTATAAAAATATCAC GTCGTACACAAATCCTAAAAAATAGGGTATTAGGAATTTTTGTTAAGGTC CACGACTTGAATTTGAAAGTGGGGGGGAGGCAATGAATATAAGTCTAAGG AGGTGCAACCATGATTTCCTTACTTTGCAAAAACGTGGGGGGGGGGTTAT GGCCCTGGCTCCCCGGTGGCGTGGGCCCTGTTGTTGATTAGAAGATGTTC TTCCATTCATAATTTTTTTTTCATAAGAACAAACTATATAAGAACATAAG GGGCTTCGCTGGCCAAAATATTAAGAACAAGGTAAGACATTAAGTAGAAG GCTTTGTGAACCCTAAAACAACCTTATTTCTTAAGAAAATGGACAAAATT CCTAACAAAATTGTGAAAATAAGAACATATGTTAAGAAAATTTTAAGGCT TAAAACTCCAAAAGTTAAGAACATCCAAAGGCTAAAAGAATTTTGGATGT TGTTATGAGTAAATGTGTAATTCTAATTTTAATTCTAGGGTCACACGATT GTTGGTGATGCTACCACACCTCAACTATGTGCAACGTTCTTCGGCGATCA ACCAGAAAATTTGAAACCAGAAGGACGCCGAGGATTCCGAGGAGCTGAGA CTATCGACAAATGGCCATCCCTACTCAAAGATTTGGTGAAAGATGGATAT GCTACTATGCATTCTGAAGATGAGCCATTTATTAATTCGTTTAATTTTCG TTTACATGGTTTTAAGAAGCAACCGACTTTGAAGTATCTTCGGCCGTGGT GGAGGGAGTCAAATGATTTGCGAAAAATTAAATATTGGCGTTCAAACTCT TGCCCAATAAACTTTGCGATGGATTATACTAAAAACTTCTATAAAGAGTA CTCAGAAGAGTTAAGTGCAGTATTTTTAATGAACTCTGCTCTCACTCATA ATGAACCGGAGCGTGTTCAAATGCTTGATAATGGCTTTATAAAATTCTTT CAATATTTAAATGAATCGAAAAGATTGGAATCTACTGCCGTTATTTTCTT CGGCGATCATGGTATGAGAGAAGGTGGGTTTAGGTCCACTATACAAGGCA AGCTTGAAGAACGTCTGCCTTTTATGACCATTACTCTACCACCAATCTTC TACCAAAGACATCCAGAGTTAGTCAAAAATCTTCAACGAAATTCAAAAGC CTTAACAACGCCTTATGATATACATGCAACTCTAAAACATTTGATTCAGT TCACAAGCGGAGAGATACCAAAACATAAATTTGGTCGTAGTTTATTTACA AATATTGTATCTTTGAATCGAGAATGTGGTGAAGCTGGAGTTACACCCTT CTGGTGTGTTTGTAGGAATTTTGCACCTGTTAAAAACTTGAATGATCCAA CTGTTCGAGAAATTGCCACCGCAATTACAAACAGTATTAACGAGGTAGTC TTCAAGAACGAGATTGCTAAGCCACAATGCCAAACGTTATCTTTAGATCA AATTCATAGAGCCAGTAAGATGATACGAGCTGCCAAAGACGATGGAGCTT TTCAGTCTTACGAGTTAGTCTTAAAATTGAAACCATGTGGGGGACTTTTT GAGGCAACAGCAGAATATGATATTAAAAATAAGAAAGTCAATGTTGGAAA AAACTTTAGTAGAATTAATTTATATAGAGATCAACCGAAATGTATTCAAC AACAATTTCCGTATTTGAGGAAATTTTGCTGTTGTAATGGACAATTCTAA TATTTTTATTTTTATTATTTTCAAAATATATTCGTTTTCAAATATGAGAA ACACATATTAATTTTAACTTAGCTACAAATCTGTTCCAGTTTATAAATTT TTTTTTTGTAAATACTCCCTGAGAAATATCATTTCGTTAAATTCGCGAAT ATCAGATTTCAAATTATTTTGTAGGAATTAAAATCCATTCACTTTAAATG TGCACTAACCTCTGGTTAAAATGAACTTTTATCATTTGGAGCTAGCATGA ACATATAAACGACTGGACATCCATCTCCTTTGTCTTTTTGTAGAAAGGAC TGCTAGCTTCGTTGCCGCCTCGTTAAAAGCATAAAATGAAACAATAGATT TTGATGATATACCACTTGGGAATACGTTGCTAACAACGTCAAAACTTCGA CAAAAGTCTCTGTTGTTCTACTCTTCTCAAGTCTTTTATCTATATCATAA CAAAGATAACAGAGGCAAA

Coding sequence (CDS) from alignment at sc0000600:93375..98293-

>TCONS_00027020 ID=TCONS_00027020|Name=TCONS_00027020|organism=Clytia hemisphaerica|type=CDS|length=7254bp|location=Sequence derived from alignment at sc0000600:93375..98293- (Clytia hemisphaerica)
GGTCACACGATTGTTGGTGATGCTACCACACCTCAACTATGTGCAACGTT
CTTCGGCGATCAACCAGAAAATTTGAAACCAGAAGGACGCCGAGGATTCC
GAGGAGCTGAGACTATCGACAAATGGCCATCCCTACTCAAAGATTTGGTG
AAAGATGGATATGCTACTATGCATTCTGAAGATGAGCCATTTATTAATTC
GTTTAATTTTCGTTTACATGGTTTTAAGAAGCAACCGACTTTGAAGTATC
TTCGGCCGTGGTGGAGGGAGTCAAATGATTTGCGAAAAATTAAATATTGG
CGTTCAAACTCTTGCCCAATAAACTTTGCGATGGATTATACTAAAAACTT
CTATAAAGAGTACTCAGAAGAGTTAAGTGCAGTATTTTTAATGAACTCTG
CTCTCACTCATAATGAACCGGAGCGTGTTCAAATGCTTGATAATGGCTTT
ATAAAATTCTTTCAATATTTAAATGAATCGAAAAGATTGGAATCTACTGC
CGTTATTTTCTTCGGCGATCATGGTATGAGAGAAGGTGGGTTTAGGTCCA
CTATACAAGGCAAGCTTGAAGAACGTCTGCCTTTTATGACCATTACTCTA
CCACCAATCTTCTACCAAAGACATCCAGAGTTAGTCAAAAATCTTCAACG
AAATTCAAAAGCCTTAACAACGCCTTATGATATACATGCAACTCTAAAAC
ATTTGATTCAGTTCACAAGCGGAGAGATACCAAAACATAAATTTGGTCGT
AGTTTATTTACAAATATTGTATCTTTGAATCGAGAATGTGGTGAAGCTGG
AGTTACACCCTTCTGGTGTGTTTGTAGGAATTTTGCACCTGTTAAAAACT
TGAATGATCCAACTGTTCGAGAAATTGCCACCGCAATTACAAACAGTATT
AACGAGGTAGTCTTCAAGAACGAGATTGCTAAGCCACAATGCCAAACGTT
ATCTTTAGATCAAATTCATAGAGCCAGTAAGATGATACGAGCTGCCAAAG
ACGATGGAGCTTTTCAGTCTTACGAGTTAGTCTTAAAATTGAAACCATGT
GGGGGACTTTTTGAGGCAACAGCAGAATATGATATTAAAAATAAGAAAGT
CAATGTTGGAAAAAACTTTAGTAGAATTAATTTATATAGAGATCAACCGA
AATGTATTCAACAACAATTTCCGTATTTGAGGAAATTTTGCTGTTGTAAT
GGACAATTCTAAAGCTTTCATACAAACTCGAGCATGATTTTATGAAAGTT
GACATCAGAGAAGCTAATAAAAAACCCATATCCGAATACCACATGTATCC
GGTTAAAAAACCAAATCCAGAAGGACCAGAATTCCGGAAATATGATCCCG
GTAAAAGTCAATTCAATATCATGATGATTATGTTGGATTCAGTATCTCAC
GCATGCGCGCAACGTTATATACCGAAAACGTACAAATTTCTTCAGAACAA
CCCTTATACTACGATTATGGAGATGGTTATTGCCACAAAGAGAAAGATCA
CCAAGATATTCCTCATATTTTTGGTCTGTGTTATCGCACTGAATATTTTT
TACTACGATTACCAAATATGCAGGAAAGCTCAATCGTCGTCCAATAGTAT
CTTCTGTCTGGTGGTATCAAGATATGTCAAAGTACGAAGTCAAGGACTTG
GCAATGCTTTAAATGTAACTGGTATTGTAAACAATATCCGAAAACCAGTT
AAAGATTACTTGAAAACACAACACCTTGATTTAATCTTGAAAAAGGAGAT
CTTAAATGGATCTTTAGAGTCACCAAAAGTCTCAACATTGAGTCCCACAA
TGGGAGTAAAAACTATTACTAAAGACACAAGGCAGGCTGAAAAATTAACA
CCTAAAAATGAAGCAAGAACAGAGAAGGAAGTTGAAACAGATCTTAAGAA
TACCTCACCAGTGATGACAACCACCTCAACGACAACTACGACCAGCCCAA
CGACGACAACAACGACTAACCCACCCACAACAACGACCACCCCACTCACA
AAAACGACCACTTCAACGACAACAACGACCACCCCACCAACAACAACGAC
CACCCAACCCACAACAACGACCACCCAACCCACAACAACGACCACTCCAC
CAACCACAACAACGACCCTCGCGATAACATTATCAACTGAACAACTTACA
ACTCCAACCATAAACAACACTTTAAAATGTCGTATCCCAAAACTGGATCC
TTTCCATCGTGAAGTCATGCCATACGTCCGTTGGAACTGGATTAATGATA
CTTGCAAAATAAAGCAGGAGAAAAGCAGAGTTGAGAATGGAAAATTGATT
GTGAATCTAGAAAATGTTGTTGAAGTCAATTTGAACTATATCATACGTGT
AGACGATTACGCAAACAAATTGGAGAAGCATCTCATTTATAACAAGAATG
TCAGTAATAATGTAAAAGGGTCACACGATTGTTGGTGATGCTACCACACC
TCAACTATGTGCAACGTTCTTCGGCGATCAACCAGAAAATTTGAAACCAG
AAGGACGCCGAGGATTCCGAGGAGCTGAGACTATCGACAAATGGCCATCC
CTACTCAAAGATTTGGTGAAAGATGGATATGCTACTATGCATTCTGAAGA
TGAGCCATTTATTAATTCGTTTAATTTTCGTTTACATGGTTTTAAGAAGC
AACCGACTTTGAAGTATCTTCGGCCGTGGTGGAGGGAGTCAAATGATTTG
CGAAAAATTAAATATTGGCGTTCAAACTCTTGCCCAATAAACTTTGCGAT
GGATTATACTAAAAACTTCTATAAAGAGTACTCAGAAGAGTTAAGTGCAG
TATTTTTAATGAACTCTGCTCTCACTCATAATGAACCGGAGCGTGTTCAA
ATGCTTGATAATGGCTTTATAAAATTCTTTCAATATTTAAATGAATCGAA
AAGATTGGAATCTACTGCCGTTATTTTCTTCGGCGATCATGGTATGAGAG
AAGGTGGGTTTAGGTCCACTATACAAGGCAAGCTTGAAGAACGTCTGCCT
TTTATGACCATTACTCTACCACCAATCTTCTACCAAAGACATCCAGAGTT
AGTCAAAAATCTTCAACGAAATTCAAAAGCCTTAACAACGCCTTATGATA
TACATGCAACTCTAAAACATTTGATTCAGTTCACAAGCGGAGAGATACCA
AAACATAAATTTGGTCGTAGTTTATTTACAAATATTGTATCTTTGAATCG
AGAATGTGGTGAAGCTGGAGTTACACCCTTCTGGTGTGTTTGTAGGAATT
TTGCACCTGTTAAAAACTTGAATGATCCAACTGTTCGAGAAATTGCCACC
GCAATTACAAACAGTATTAACGAGGTAGTCTTCAAGAACGAGATTGCTAA
GCCACAATGCCAAACGTTATCTTTAGATCAAATTCATAGAGCCAGTAAGA
TGATACGAGCTGCCAAAGACGATGGAGCTTTTCAGTCTTACGAGTTAGTC
TTAAAATTGAAACCATGTGGGGGACTTTTTGAGGCAACAGCAGAATATGA
TATTAAAAATAAGAAAGTCAATGTTGGAAAAAACTTTAGTAGAATTAATT
TATATAGAGATCAACCGAAATGTATTCAACAACAATTTCCGTATTTGAGG
AAATTTTGCTGTTGTAATGGACAATTCTAAAGCTTTCATACAAACTCGAG
CATGATTTTATGAAAGTTGACATCAGAGAAGCTAATAAAAAACCCATATC
CGAATACCACATGTATCCGGTTAAAAAACCAAATCCAGAAGGACCAGAAT
TCCGGAAATATGATCCCGGTAAAAGTCAATTCAATATCATGATGATTATG
TTGGATTCAGTATCTCACGCATGCGCGCAACGTTATATACCGAAAACGTA
CAAATTTCTTCAGAACAACCCTTATACTACGATTATGGAGATGGTTATTG
CCACAAAGAGAAAGATCACCAAGATATTCCTCATATTTTTGGTCTGTGTT
ATCGCACTGAATATTTTTTACTACGATTACCAAATATGCAGGAAAGCTCA
ATCGTCGTCCAATAGTATCTTCTGTCTGGTGGTATCAAGATATGTCAAAG
TACGAAGTCAAGGACTTGGCAATGCTTTAAATGTAACTGGTATTGTAAAC
AATATCCGAAAACCAGTTAAAGATTACTTGAAAACACAACACCTTGATTT
AATCTTGAAAAAGGAGATCTTAAATGGATCTTTAGAGTCACCAAAAGTCT
CAACATTGAGTCCCACAATGGGAGTAAAAACTATTACTAAAGACACAAGG
CAGGCTGAAAAATTAACACCTAAAAATGAAGCAAGAACAGAGAAGGAAGT
TGAAACAGATCTTAAGAATACCTCACCAGTGATGACAACCACCTCAACGA
CAACTACGACCAGCCCAACGACGACAACAACGACTAACCCACCCACAACA
ACGACCACCCCACTCACAAAAACGACCACTTCAACGACAACAACGACCAC
CCCACCAACAACAACGACCACCCAACCCACAACAACGACCACCCAACCCA
CAACAACGACCACTCCACCAACCACAACAACGACCCTCGCGATAACATTA
TCAACTGAACAACTTACAACTCCAACCATAAACAACACTTTAAAATGTCG
TATCCCAAAACTGGATCCTTTCCATCGTGAAGTCATGCCATACGTCCGTT
GGAACTGGATTAATGATACTTGCAAAATAAAGCAGGAGAAAAGCAGAGTT
GAGAATGGAAAATTGATTGTGAATCTAGAAAATGTTGTTGAAGTCAATTT
GAACTATATCATACGTGTAGACGATTACGCAAACAAATTGGAGAAGCATC
TCATTTATAACAAGAATGTCAGTAATAATGTAAAAGGGTCACACGATTGT
TGGTGATGCTACCACACCTCAACTATGTGCAACGTTCTTCGGCGATCAAC
CAGAAAATTTGAAACCAGAAGGACGCCGAGGATTCCGAGGAGCTGAGACT
ATCGACAAATGGCCATCCCTACTCAAAGATTTGGTGAAAGATGGATATGC
TACTATGCATTCTGAAGATGAGCCATTTATTAATTCGTTTAATTTTCGTT
TACATGGTTTTAAGAAGCAACCGACTTTGAAGTATCTTCGGCCGTGGTGG
AGGGAGTCAAATGATTTGCGAAAAATTAAATATTGGCGTTCAAACTCTTG
CCCAATAAACTTTGCGATGGATTATACTAAAAACTTCTATAAAGAGTACT
CAGAAGAGTTAAGTGCAGTATTTTTAATGAACTCTGCTCTCACTCATAAT
GAACCGGAGCGTGTTCAAATGCTTGATAATGGCTTTATAAAATTCTTTCA
ATATTTAAATGAATCGAAAAGATTGGAATCTACTGCCGTTATTTTCTTCG
GCGATCATGGTATGAGAGAAGGTGGGTTTAGGTCCACTATACAAGGCAAG
CTTGAAGAACGTCTGCCTTTTATGACCATTACTCTACCACCAATCTTCTA
CCAAAGACATCCAGAGTTAGTCAAAAATCTTCAACGAAATTCAAAAGCCT
TAACAACGCCTTATGATATACATGCAACTCTAAAACATTTGATTCAGTTC
ACAAGCGGAGAGATACCAAAACATAAATTTGGTCGTAGTTTATTTACAAA
TATTGTATCTTTGAATCGAGAATGTGGTGAAGCTGGAGTTACACCCTTCT
GGTGTGTTTGTAGGAATTTTGCACCTGTTAAAAACTTGAATGATCCAACT
GTTCGAGAAATTGCCACCGCAATTACAAACAGTATTAACGAGGTAGTCTT
CAAGAACGAGATTGCTAAGCCACAATGCCAAACGTTATCTTTAGATCAAA
TTCATAGAGCCAGTAAGATGATACGAGCTGCCAAAGACGATGGAGCTTTT
CAGTCTTACGAGTTAGTCTTAAAATTGAAACCATGTGGGGGACTTTTTGA
GGCAACAGCAGAATATGATATTAAAAATAAGAAAGTCAATGTTGGAAAAA
ACTTTAGTAGAATTAATTTATATAGAGATCAACCGAAATGTATTCAACAA
CAATTTCCGTATTTGAGGAAATTTTGCTGTTGTAATGGACAATTCTAAAG
CTTTCATACAAACTCGAGCATGATTTTATGAAAGTTGACATCAGAGAAGC
TAATAAAAAACCCATATCCGAATACCACATGTATCCGGTTAAAAAACCAA
ATCCAGAAGGACCAGAATTCCGGAAATATGATCCCGGTAAAAGTCAATTC
AATATCATGATGATTATGTTGGATTCAGTATCTCACGCATGCGCGCAACG
TTATATACCGAAAACGTACAAATTTCTTCAGAACAACCCTTATACTACGA
TTATGGAGATGGTTATTGCCACAAAGAGAAAGATCACCAAGATATTCCTC
ATATTTTTGGTCTGTGTTATCGCACTGAATATTTTTTACTACGATTACCA
AATATGCAGGAAAGCTCAATCGTCGTCCAATAGTATCTTCTGTCTGGTGG
TATCAAGATATGTCAAAGTACGAAGTCAAGGACTTGGCAATGCTTTAAAT
GTAACTGGTATTGTAAACAATATCCGAAAACCAGTTAAAGATTACTTGAA
AACACAACACCTTGATTTAATCTTGAAAAAGGAGATCTTAAATGGATCTT
TAGAGTCACCAAAAGTCTCAACATTGAGTCCCACAATGGGAGTAAAAACT
ATTACTAAAGACACAAGGCAGGCTGAAAAATTAACACCTAAAAATGAAGC
AAGAACAGAGAAGGAAGTTGAAACAGATCTTAAGAATACCTCACCAGTGA
TGACAACCACCTCAACGACAACTACGACCAGCCCAACGACGACAACAACG
ACTAACCCACCCACAACAACGACCACCCCACTCACAAAAACGACCACTTC
AACGACAACAACGACCACCCCACCAACAACAACGACCACCCAACCCACAA
CAACGACCACCCAACCCACAACAACGACCACTCCACCAACCACAACAACG
ACCCTCGCGATAACATTATCAACTGAACAACTTACAACTCCAACCATAAA
CAACACTTTAAAATGTCGTATCCCAAAACTGGATCCTTTCCATCGTGAAG
TCATGCCATACGTCCGTTGGAACTGGATTAATGATACTTGCAAAATAAAG
CAGGAGAAAAGCAGAGTTGAGAATGGAAAATTGATTGTGAATCTAGAAAA
TGTTGTTGAAGTCAATTTGAACTATATCATACGTGTAGACGATTACGCAA
ACAAATTGGAGAAGCATCTCATTTATAACAAGAATGTCAGTAATAATGTA
AAAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_015176XLOC_015176Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00027020-proteinTCONS_00027020-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00027020-exon-sc0000600-1575043694:97080..98293TCONS_00027020-exon-sc0000600-1575043694:97080..98293Clytia hemisphaericaexon
TCONS_00027020-exon-sc0000600-1575043694:96161..96420TCONS_00027020-exon-sc0000600-1575043694:96161..96420Clytia hemisphaericaexon
TCONS_00027020-exon-sc0000600-1575043694:93375..95055TCONS_00027020-exon-sc0000600-1575043694:93375..95055Clytia hemisphaericaexon
TCONS_00027020-exon-sc0000600-1510915933:97080..98293TCONS_00027020-exon-sc0000600-1510915933:97080..98293Clytia hemisphaericaexon
TCONS_00027020-exon-sc0000600-1510915933:96161..96420TCONS_00027020-exon-sc0000600-1510915933:96161..96420Clytia hemisphaericaexon
TCONS_00027020-exon-sc0000600-1510915933:93375..95055TCONS_00027020-exon-sc0000600-1510915933:93375..95055Clytia hemisphaericaexon
TCONS_00027020-exon-sc0000600-1491911889:97080..98293TCONS_00027020-exon-sc0000600-1491911889:97080..98293Clytia hemisphaericaexon
TCONS_00027020-exon-sc0000600-1491911889:96161..96420TCONS_00027020-exon-sc0000600-1491911889:96161..96420Clytia hemisphaericaexon
TCONS_00027020-exon-sc0000600-1491911889:93375..95055TCONS_00027020-exon-sc0000600-1491911889:93375..95055Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000600supercontigsc0000600:93375..98293 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0 0.0359397 0.0585081 0.134094 4.92713 5.46003 11.1025 13.3365 6.32136 5.18876 5.75261 6.0477 1.48834 1.23012 0.245594 0.163866 1.1174 1.12935 1.96771 1.88749 1.15554 1.37882 0.508148 0.600702 2.15939 2.66059 0.0348561 0.0763147 0.0157115 0.0324749
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR017849Alkaline_Pase-like_a/b/a
IPR004245DUF229
IPR017850Alkaline_phosphatase_core
Vocabulary: Molecular Function
TermDefinition
GO:0003824catalytic activity
Vocabulary: Biological Process
TermDefinition
GO:0008152metabolic process
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008152 metabolic process
molecular_function GO:0003824 catalytic activity
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00027020 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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