TCONS_00027018 (transcript) - C. hemisphaerica

Overview
NameTCONS_00027018
Unique NameTCONS_00027018
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2650

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00027018 ID=TCONS_00027018|Name=TCONS_00027018|organism=Clytia hemisphaerica|type=transcript|length=2650bp
TGACTACCTATTGTACAAAGGtctttataaatatatttttgatccAAACA
AGGTGTAAAATAAGGCTTTTAGAGGGAGACAAGTAAATTTAAATCAAGAT
TCCGATAACACTGTTTTTAAAAGCCCACTTATTATTTGAATATTACTGTT
GCTGGAATTTTTGATTTCATGGACACTATGCCTTGCTTAATTTTGGTGAC
TTCACTTCTGATTTTCACGGTTAGCACAAAGACTATCATGTTACCTTTCC
AAGATTTCGAGGAGTCGATACAGCAACACGAGAAATTTCAAGACAAACCA
GAAGATGCGATGAAAAATTTGAACGGAAAACTACCTTTTGGGGAACTCGA
TGCAGTGATAAATGACAAAATCTTAGATAAGAGGGAATCAAAAGAACCTT
TCAAAGATACACCAGATAACATTCATATCTCTCCCAATGACCTTCGAATC
AAGACTCACAACAAGTCGAAAAGAGAACCCGAGCTTGGCTTGGCCTCTGA
CGATGACCGAAATGGTTTAGAATTCCAAAGGAAATCGAACAGCAAGAACA
ACAATGAAGAAATTAAGCGTCAAATTCCCGAAGATATCAAACTCAAGAAG
AGATTTGAGGAGCTGAGCAGAAAAACCAAGGCTGTTGATCCGTTCGCCGA
AGATATGGAAGTAGAAAAGAGACACAATTGTTGGAGACGTCACTGGCAAT
GTTGGGTGCCATCAAAGAAGTGTAGAAACAACTACGAATGTAAATGTTGT
GATCACCAGTGCATTGAAGaaaataaaatctacCATCATCGATAAAGTTT
CAATTATGTTTGGGTTTGCAAAGATTAACTATCTATTGATCAATATCTTA
CTGGTCAATCTGCCAATATCATACATATCGAGTTCACGCAACGGAGAATC
TAGACTAGTGGAGGATCTTTTTCGTAACTATAACAAGGAAGCCAGACCTG
TACTCAACGATTCAACAATACTTACCCTCAATCTTGGTATAGCTCTCCAT
CAACTAATCGAAGTGaaagaaaaacaagaataCTTTGCAATCAGTTTATT
CGTTCGTCAACTATGGACGGATGAGAACTTGGTATGGGATCCAGCCAATT
ACAGTGGTGTTGAAACCATCAATGTATCACCAAGACAAGTCTGGTTACCA
GACCTGGTATTGTACAATAAtGTTGACGAAGACAAATCATTTGGTGGCAG
TTTAGATCAGCTGAACAATCGAGTCATCGTTAGGAATGATGGTTCCATTA
AATGGCTGACACCTGCCATCTTCCGTGCAAAATGTGGAATGAATGTCGAA
TTTTTCCCTTTCGATACACAAATTTGTACGCTAAAGTTTGGTAGTTGGAC
TTATAATGGTTTTCAAATTGATCTAAAAAATTTGACTCGTGATGTTGATT
TTGCCTCTTATTCCAAGCATTCAGAATGGCTTATCACCGACGGATACTTA
CGTCGAAACGTAGTGACGTATACGTGTTGTCCGGAACCTTTTCCCGACGT
AACTGTAACCTTAACATTGAAACGAAGATCATTATTTTATCTGATGAATC
TCATCTTCCCGATGGTTGTAATCAGCATGTTGACAATGTTATCTTTTTAT
CTGCCAGCTGAATCAGGTGAACGAATCGCACTTGCTATTACCTTACTGCT
CGCCATGACTGTTTTCATGTTGATCGTCGGTGAGATCATACCTCCAACAT
CTGACAGTGTTCCTCTTGTCGCCACCTTTTTCAGTGCTGTCATGTTGGAA
ATGGTTCTTATGGTTGTCATACTATGTTATGTTCTAAAATTCCATTTCAA
GACCAAGGAAGATGAGATGCCACGCTGGATGAGACGTCTGGTCTATGATA
ACTTGTCCTACAGTTTGGGAATTCGNCACGCTGGATGAGACGCCTGATCC
TTGATAACTTGTCCTACAGTTTGGGAATTCGTCCTCgatcaaaaaagaaa
gaaaaaacagaGGAAACCTTAGGAGATAAAGTGAAAACAGTCCTTGAGTT
GAAATCGATTAATAGGACAAATGGGATCGGTACCGTAACTGTAGTCCAAA
ATGGTGTCCTTACAAAACATGGcggcgatataaacaaaacatttgAGAAT
TGCTTTATGCATCAAAATGTTGATTCAATGAAAGATTCTGATGATAACAG
TACAAGATATTTGGGTCAAAAGTTGGATATTTTCCTGGAGAAGCTATTGT
TAGATGAAGAAGATGCCAAAGCAAAGGAAGAATGGCGAATATGTGCAATG
ACCATCGACAGGTTGTCATTATACATGTTCGGAATCATTTTCGTGGTCAC
CTCATTGAGTATCTTTCTCAAAGCACCTGAGTACGTCGCTTGAAAGTTGG
GACAGTATATCAAAGATGTAGAatgagcttttccagaaaaaaaccgtata
ccccctttTGATGAGGTTCAAACTTTTGTGAATGCTGAAATCTCTTGGAA
TTTTTGGTAATTTGAGGCTTAAACCTTTCTggagttttaaatttttgaag
agTTACCCTCATGGAGTTCCGGCTTAATTGACAGATTTTTATATGTCCCT
ATATGGAATTCCGGCACACGACAAAACCTAACCCCTTGAGACGGAGCTGG
ACATCCCCAGAAGACGGTATACGGTTTGTATTCTCTGGAAAAACCCAAGC
Run BLAST on NCBI

protein sequence of TCONS_00027018-protein

>TCONS_00027018-protein ID=TCONS_00027018-protein|Name=TCONS_00027018-protein|organism=Clytia hemisphaerica|type=polypeptide|length=360bp
MFGFAKINYLLINILLVNLPISYISSSRNGESRLVEDLFRNYNKEARPVL
NDSTILTLNLGIALHQLIEVKEKQEYFAISLFVRQLWTDENLVWDPANYS
GVETINVSPRQVWLPDLVLYNNVDEDKSFGGSLDQLNNRVIVRNDGSIKW
LTPAIFRAKCGMNVEFFPFDTQICTLKFGSWTYNGFQIDLKNLTRDVDFA
SYSKHSEWLITDGYLRRNVVTYTCCPEPFPDVTVTLTLKRRSLFYLMNLI
FPMVVISMLTMLSFYLPAESGERIALAITLLLAMTVFMLIVGEIIPPTSD
SVPLVATFFSAVMLEMVLMVVILCYVLKFHFKTKEDEMPRWMRRLVYDNL
SYSLGIXHAG
Run BLAST on NCBI

transcript from alignment at sc0000600:66525..79761-

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00027018 ID=TCONS_00027018|Name=TCONS_00027018|organism=Clytia hemisphaerica|type=transcript|length=13237bp|location=Sequence derived from alignment at sc0000600:66525..79761- (Clytia hemisphaerica)
TGACTACCTATTGTACAAAGGTCTTTATAAATATATTTTTGATCCAAACA
AGGTGTAAAATAAGGCTTTTAGAGGGAGACAAGTAAATTTAAATCAAGAT
TCCGATAACACTGTTTTTAAAAGCCCACTTATTATTTGAATATTACTGTT
GCTGGAATTTTTGATTTCATGGACACTATGCCTTGCTTAATTTTGGTGAC
TTCACTTCTGATTTTCACGGTAAGAACAGATCGATTAAATTTGTTAGGTT
TTGCAAAAAGACTTTTACCCTTATTTTAAATACGACCCCTTGTACGTATA
TAATTGATCATTATCAAAACAAAATTAATCTTGATTCTTCTTTTTTGATT
TCTGGTACTATTGAGATATTTGGAAGAATTTAACTTCTGAAGTTAAAATA
AAAAATTAGTTTTAAGTAAGAAATTTTGTCGTTTTGACGAGTTCAATTAG
ATGGATGACCAAAAAAAGGTTAGATTTGGAGGAAAGTAAGGAAACTTTCT
TACCATCAATTCAAAAGAAACTTGCTTAGCTTTGAGGAATCTATGAAACA
TTTTTATTTTGCGAACGGTGAAGAAAAAGAATGATGCTGGAAATATAATT
TGGTATATTTCAGTCGGTACAACATTTGCCTTACAATCTAAGGGGTTGTG
TGTTCGATCCCCGGTCACCGCCAATTCAGCGGATGAGTAGCTTAGATTGG
GTAATCTGAGGTCTAGCGCAAATAGAAAAGGGGATAGACTCACTCCCAGC
TCTGCCGACAGCCACCATATTAATATACTTACTTTACTTACTTATTGGTA
TTTAGGTTAGCACAAAGACTATCATGTTACCTTTCCAAGATTTCGAGGAG
TCGATACAGCAACACGAGAAATTTCAAGACAAACCAGAAGATGCGATGAA
AAATTTGAACGGAAAACTACCTTTTGGGGAACTCGATGCAGTGATAAATG
ACAAAATCTTAGATAAGAGGGAATCAAAAGAACCTTTCAAAGATACACCA
GATAACATTCATATCTCTCCCAATGACCTTCGAATCAAGACTCACAACAA
GTCGAAAAGAGAACCCGAGCTTGGCTTGGCCTCTGACGATGACCGAAATG
GTTTAGAATTCCAAAGGAAATCGAACAGCAAGAACAACAATGAAGAAATT
AAGCGTCAAATTCCCGAAGATATCAAACTCAAGAAGAGATTTGAGGAGCT
GAGCAGAAAAACCAAGGCTGTTGATCCGTTCGCCGAAGATATGGAAGTAG
AAAAGAGACACAATTGTTGGAGACGTCACTGGCAATGTTGGGTGCCATCA
AAGAAGTGTAGAAACAACTACGAATGTAAATGTTGTGATCACCAGTGCAT
TGAAGGTATTTGTTGGTTTTCTTACCAGCATTCGCACAACTCCTGGTGGA
AGAAAAGTGAATGAGAGTGGTACATCAAAAGTTGTTCCAATACAATATTT
TTTGTATGTTATTAAATGTTAGATACTCGGGATACTGGAAGTTGTTTTAA
AACTTTGAGTTGATATAAGCCGATAAGATACGAAGAATAAAAGTGTTTTA
TTAAAAAAATCAGTGTCTAGTGGAGTCTCCGTAATACGCATGGGGAACAC
AAATTTATTCGAGTTAATAAGGAAATTTCGAGTTATGGAGTAAAGTTTAT
AAGGCATTATTAACTGAAAGGGAACATAAAACTTTTTCGAGTTAAAGAGG
CATTCGAGTTGTAGAGGTTCGAATTAGGGAGGCTACTAGCAACATTCGCA
TTCGCTTATAACTATTTCAAGACTTAAGTTTTTCCTTCTAGCCCATAAAT
CAAAAGTCTTTTGATCAAAAGGTGGACACTATAATCCGATTCCCAATGGT
GTCTCTTAATTAGAGATTCCACCGTATTTGTACAAATTTTTGCATAAAGC
ATTCTTCTGTGTTTTTTCGAACACCCAAAGTTGGATTTAGAGGAAGAGTT
TTATTCGAACACCACCTTCTCACAGACCCACTGGGACCTCTTCCCACTGG
AAAAATTGGCCAAAACATCGTCCCCGGTGGAAAATTATCCTTCAATTTTT
TTCCCCACTGAAAGTAATCATAAGAAAAACAATCCTCACTGCAAAATATT
TATCATTTTTCTAATCCCCAGTGAATTTTCTTACTCCAAAGTAAAAGAAT
TGAACTCCTCAGCCATAAAAAATATGGGGAATATCAATCCCCATCGAGTT
TTAGTCCGTTATTTTTATCCCCACTGGCTGAAAAAATCATACTGAGTTTT
TGAGAAGGGCGTGTATTTGAAAATGTTGAATTTTAACATTACATTATGAG
GATTATAATTTGGTTCAAGTTTTTTAACCTAGCCAGTAGGATAGTACGAG
GGGAGTATACAATTGTTCTAATAAAAGCCACATAGTTTATGAAACAAGTA
AAATTAAATCTTGTGTTGTATGAGAGACAAGTTTTGAACTATTTGAAATT
ATACACCTGCATCTCACAGACCCACTGGAACCACTTACCACTGGAAAAAT
TGGCCAAAATATCGTCTCCAGTGGAAAATTATACTCCAATTCTCGTCCCC
ACTGAAAATAATCAAATCAACCAATCAATCCTCTTTGCAAAATATTTACT
ATTTTTGCCATCCCCACTAAACTTTCTGACTTGAAAATAAAAGAATTAAA
ATTCCCAACCATAAAGAAGGGATTTAATCCGTTATTTTTACCCCCACCGG
CTGAAAACCCCCACCGGGTCTGTGAGAAGGGGGTGTGAGTATGAAATACT
TCTTCTGTAAGAATCAAAAACTATTTCTACTTTTTACATCCCTGTGTAAC
AGACCCGGTGAGACCCGCTGGAAAGTTTAGTCAAATTTCGTCCCTGGTGC
TGAAAATAAGTTCCCTACAATTTCAACCTGACTGGAAATCTGACATTGTT
TTCATCGGTTCAAAATTCAAAAAATTCAATAGAAAAAATTGCTCTCCATA
GCAATCCCAACTGGATTTTTTGAACTGAAAACAATAGAATTTTGATACCC
AGTGGGATTTCGAAAGAAATATTCATCCCTACTGTGGAAAGTTCTACTGG
AAGGACTGCGAGCATGCTGCAGGACAGGGCTTATGATCAATATCTTCGGT
ATTGTATTGAACAGTAGCGTAGACAAGAGGGGCGCAAAATTTGTGTAGGA
GAGCAGATTTTTATGTCGTAGTAATTATCTATTCATGATGTATAAAGACA
ACTACAGTGTTATAAAAATCTGCTCCCCTGTACAAATTTTACGCCTCTTG
TCTACGTTACTGTATGAAATTTGAGTCTCAAATTAAGTGCTCAATTTATT
TTTATGTTTTATGATAAAAACTGACTTTTTGGTCTTCATAAAATTGTTTT
TACTGAGACTTTTACCAATTGATAAATAAATTCTTTCTGAAAGTGCTTTT
AAATAAATCTTTGTAATAGCCAAGATAACCATGGTTGTAATGGAAGATAT
CTAACACCAAGAAAAAAGCTCAATAAGTCAGTTTCGATGAGAGATTATGG
GAGACTTATGCCAAAACACCTTTTTAGGTTTCCTTATCCATGTTTTGTAG
TACTTAGGATTATCTTTTGTGTTTTGAGGCTTTATAAGGAGGTTAATAAA
AACTGATAAAACGATTCACAGCGGCTAGATCACACATTAGATATATCTGT
TCCCCCCCAAGGTATTTCCTATTTTTCCTCTTTTTTAGTCCCGCTAAAGG
TACGAGGGTCGAAAGTCGGGTGGCACACCCCCGTCATCTCGCAACCCTAG
TACCCTCTTTCAGACAATATGCGAATGCGTCCGCTCTTAAAAAGCATTCT
TTGTGGACATTAACAGAACCAATATATCATCCTCGGCATCACAGACTCCT
TGAGATCTTCCACCACTAGGAAAATCTAACTTCAATCTAAGTCACATTTG
AAGAAAATTCAGACATATTAGAAATAAAGTAAAAAGTCATATAGAGGGAA
CAAATTTTAGTACAAACTAAACCCCGTAGCAATAATCGTTTTATCATGTA
GCGCCTATACTACTGTATTACACGCATTATAAACGACTCTAGTCTAAAGA
AAAGTAGAATTCACTGTACAAAATTTTAAAAACCACAAATAATTTTTAAG
TGGGTCCTGAGATCCTAAGGTCTCAATAAGCCTTGATAAGTTCATCTTCG
AGAATATAAAGTTTTAATTCTGAATTTCGACATCAAAAGACTTGAGACCT
TAGGATCCCAAAACTTTAGGATCTCCGGATCCAAAAGATCAAAAATGTTC
TGAAACTATAGCCTTGTAGCCACTGAATCCCTTCCAAATTGAAATATCTT
AGTGAAATAAGATTAGAATGCCGAAATCCCAATTCTCCTCCCAACTTAAA
ATCCTGAATAACGACAAAATACCCAATCTGCCAATTGTGAAGGGTTTTGA
TTATTAACACCCCTATCTCTGGCCTGGGATTTTTTTATAATTTCNATTTT
GATTATTAACACTTATTAACACACTATCTCTGGGATTTTTTTATAATTTC
ACCGGGGAGTCAATTCTCTTTAGATTGGGAAAAACCTGGGAACGGAATTT
TAAGTAGGGAAATACATTTTCTCACAAAGAGAAATTTAAGCTATTTTTTG
CTTTGGGAGCAACTATTTTGCTGTTATCTTTCACCAGGTAGGCCTTCATT
GCATTACTGAGCAAATAGCTTTCATAGGGTCAACGAGAAAGGGGTTTCTG
ACGATGACTGGCCTCTCTTTTACAGAAGATACCCAGTCCTGTATTTAGTG
GTCTCAGGAATCGTCTCGTTAAAACTCATCTTCGCTATGGTTTATACTGT
CTGCCAGCGTGCAATCAAAAGAGACACACAGTTTTTGAATCAAGTGTTTT
AATCTGGCCATTAAACAGCCGTGGCACGTGTCCAAAGTCATGGACTAAAT
CCTCAGCCGGGATTTTGTACTTGGTAAAAAATGGTACTTGGAACCTTTTC
GGAAAAGATCAAAGGATAGCGGAGAAATCTAGGGGGATAAAGAATGCCCT
TTTCTACTTTCGTCTAGAAAGCTAAAGAAAAGGGAGCACTTTGGATCACC
CTCGCCTGCAGTCGCAAACTTAATTTAAGGGTCATGTGATTATTCTAATA
AGTACAATTCTACTTTTTTATAAAATCTTAATATTTTCTATCCAGCCGAC
AAAAAAGTGTGAAGTTTGCATGCGGGGCAAGTTCTACTTTCTTATTATTT
TCATATTAAAATATGATAAGAAAGAATTTTTTTACTAAAGATTACATTAT
GATAATACCCACTGTTTTAAATTCTTAATGTTTATGAAAAATATTTTCAA
ATAAAATTCAATATTTTCCTCAATTTTTTGCAAAATTTTAAACAGTCAAA
GCTTTCTCTTTTCTCTGAATATAAGCTGTTTTACCAGGCTAGGTGGTAAA
TTCCAGACAACGCACAACGGATGTAAAATTCAAATTTCATATTCTGAATG
TAATAAGTGAAATTTTTTATTGAACTTTAAATGAGGAAATAGTAAAACAC
ATGTCTTATTCATCTTCTTTAAGGCATCAAGGCAGAACATCTTCCGGGAC
TTCCGAAAGTTAACTCTTTCTAGTGGAAAACTAAAATTTTTGGGATTTTT
TTCAAAGGCACGGTAGGTTCTTCTTCAAATACAATTTTCTCGATTTTGCC
TACGAACCTGAAGCTAATTTCAAGATCAGCACTTTTTTGAATTAGGTCCT
CCAACTAAAATTACCGGCAGCCGAAAGAATTGTTTATAAATGAAGGCATT
TTAGATGGGCTTTACCGATAGAGAGTGAAGGAATGGACGAATTTAGATAT
TTAGTTGTATACAGTATACATCAAATACACCTCCCAGCTGGCACACAACG
TTGTTTTAACGTTCAAATAACGTTATATGGACGTTGTGAATGTCACATGG
ACGTTGTTTTGACGTTGTGCACCGTCAGGGCTTACATATATAATGGTGGT
AACGTTTTATTTTGGTGAACATGCTTCATATATTTTCGGGTACATTTTAT
CGTTGTTGACCAATTAAAGATGCCAATTTCAAAGTTAATGTCCAAGGAAA
CCTAAGATTTTCCTATTTGGCTGACCATACATTTTACCTTCATACCTTCT
TCACTATGTAAAAAGGGTCAATCTGAAATTCAAGATTAGCTTAATATAAA
ATTGCTAAGTTTTCTCAGACACTAATTTTGAGATTTGCCCTTTTGATTTG
TCAACGACGTTATACATTACTCAAGTTTGACCCTATGAGATATGTGGGCT
ACAATTTAAAGATATTCTTTGTTTTTTCTTTTGTATAAGAATGCTGTGTA
AGCAAAAATGGTAAATGTGAGTGGATTTCCAAATTTAGTATGACTGGGAT
TGTTTCCAAATGTGGGGATTTATTTTACCTATTGAAATCACGATTTGTTT
AAGATTTCAATTTTTTCCAGACTTTTTAAACATGGTCATGGTATACAATT
TTAACTTTTGTTTGTGGTTCCGCATAAGATAATTGTGCTATCTTAGAAAA
ATATGCGAACACCCCTGTCTCACAGCCCCGGCGAAACATTTCCCCCACAG
CGGGGATAAAAATTTCTATTGAAATCTTAATGGGGATAAGAATTCTATTG
TTCAAAGATTAAAAAATCCAGTGGGATAGTTTTGTAGTGCAATTTTTAAA
CATTGAATTCGAATGGGGTGAAATTCTAGTCAATTTCCCAGTGGGGCTGA
AATTCTAGGGTATTTTTCCCACCGGGGACGAACTTTTTGCTAAACTTTCC
AGTGGGACTGGGGTCCCAGCGAGTCTGTGACACAGGGGTGTATACGATGA
GGAAAAAATTAAAAGGGAAAGTATTTTGATCCAACTTTAATACTTTCTGG
ACCTTTCATTAAATAGTCTGAAGCTTAGGAACATTAAGGCTATTACTTTG
GAGTAAAATCCTTTATCCAATGGCTTATGGGATCATATAACCCTCATCCT
GAGGAATATGAGAGAAGGGGGCAGATTGTGAGGCCAGATAAAGAGATATG
GGGATGAAAAAATATTAAATTTTTTTACGGTTCTTTATTAAGAAATTTCT
ATGATGATTGAAACTATATTCAATTAGGACCCGTCTGTTAAACTAAACTT
TTAGTTATTAGGAAACTAAAAGACATTACTCAAAAGAACCTTTAGAGATC
TTATTTAAGGTTTCTAATGTTTTGAAATTTTTATTTGGCTTTTTGTGTTG
TTGTTGTTTGCGCGAGGTTGAATACTAACAATTTGAAGATCAACGTGGAA
AAAATATTTTTTTTGAGGAAATATAATATAACACTTATTTATGAATTTTA
CCTATTTCTTTTTGTACGTGAGAAAATGCGATAGATAATTTGAGTAACTT
TTGTTGTTTTTGGTCTTGTTTTTATACCAAAACAACGGATGTCTAGGATG
AGAGATTGGTATTTAACAATATTCTTAATATTCTAAGGGCGTTGAACAGT
ATGGTTTAAAATTTCTTCGGGTTTTATGAATTAATTCTTTGTTGATTTTA
AATGACTTTGCAGCGAAAAGTTTGACTTCCCGTAAGCGATTAGTCTTTTT
AACAACAATGTACTCCCCTGTCTCCGGAGTTAGTAGATAGGTTGTTTCGA
TCTTTTTATAAGGACTAATAAATTATGTTGATAGTCGGCTATTCTTTTTT
TTTTCGGTTATTAGAGCCCAAAAAATATTCTAAGACTGACTAAACTAAAA
CTGTTGATTTTATCTGAACAATTAAATTGTTTGCTCCCTTCATTTGAATA
GTGTTTTCAAAGACATTGTTTCGCTCCCCCTCCCCTCTGCGGACCTTCAA
TTCAGGCAATCACGCAATGTTTTTTCGAAATTTACGCAACTTTTGATCAC
GCAAAGCTTTCCAATTCACGCATCCACGCAAACTTTTTTTAATTTTCTCG
CATTCACGCAAACTGCTTGGGGGGGGGGGGCTTTGATAGATCGGATAAGT
TTCTCGCATTTGCATCGTGTGATTTTGATTTACCCTTAAACTCTGAAAAG
TTTAAATTTACACGCCATTATCTTGACAACGATTGCTCAGGCCAAACTTA
TCAATAATATAATAATAAGACAATAATTCATAATTCAAGATAATTCAGAT
TTTTAGTTAAATCAATGAATGGGAATGTTTTAAATATCGCTGAATCAGCT
TTTGGCTTCAATCAAAATAAACATTTAGGTGATCAAAATTTATTTTTTAT
ATCTGGTTGCTAGAAATTGTTTATTTTTAATGAGAAAATGTTGTATCCAA
GATAGTGAGAAATCTCTGACGAAATTCTTACGGCTTGAAAAGTGAAACAG
TGATGTTCTTTTGTTTTGCTTCTTCTGTGGGTCTGTGAGATAGGGGCGTA
TTTTTGAGTAGAGTCTCAACGGTGCGTATGATCGGCTAGAAAAACAACAT
AAAATAGAATTCTAATAAGTTTCTAATTACTTTCTCGAGTGTATGTCTTT
GCTCAAGGCGCGAGCTCGCTATTCGAGTGTTGACGTTTAGAAACCCTAAA
CTCTACGAATCACAATAAAAAAAAATTTACATTGAAATCCAGAGAGGTGT
CACATAAATATGACGCACGTCACAAGGCGTTATCCTTCTATAAATGATTC
AAAATAAATTTTTCATCATTTGTAAATTTAGTCATCTTTTTTTATTTAGA
AAATAAAATCTACCATCATCGATAAAGTTTCAATTATGTTTGGGTTTGCA
AAGATTAACTATCTATTGATCAATATCTTACTGGTCAATCTGCCAATATC
ATACAGTAAGTGTTAATAATCATATTTGAGAAAGATGTCTTTCATATTGG
AGAGCATTGTGCGAATCTCTAACTATCAAGCACTATCAAGAGTAAAAAAA
TGAGTGCTTGGTGTGTGCGTGTGGCAAAGTATCTTTTTAACAATGTAGAA
ATATCCCTCTAAACGGTTACAAAAACCAACCTGGTATAGGGTCGACTTTT
GGTTATTTCGGACAATTTTCAGTGTGGAAATAAGAATTCCAATTTTTGTC
TACTTTTAGTCAGTTTTTCAGGGTGAAAACTGTAAAATTTGGTGATTTTT
CGTTCTGACAGAGTCCCAAATTTACCAAACAATCATTTCTGACAGGGTCC
ACTCTTCAAACTCTGGCAGGAGATATCCTGTCCAATGTTGGAATCGCATT
CGAAACTTTAATGTTAATTTTATGTTTTTCAGTATCGAGTTCACGCAACG
GAGAATCTAGACTAGTGGAGGATCTTTTTCGTAACTATAACAAGGAAGCC
AGACCTGTACTCAACGATTCAACAATACTTACCCTCAATCTTGGTATAGC
TCTCCATCAACTAATCGAAGTGGTAAGGACATTATATTCTATGAAGTACC
GCAAGTTGGTCTAATGTCAACATCCCTCGTGTAATTCCGCCATTCTTCTT
AGAGATTTAAAGGAAGGTCGGAATCACTGATTGAAAAAAATATGTTTTCC
CCTCTGACCGCTAAATAGAGATAAGCTATTCCGACCTTTTTATTATTCCC
AGGTTTAAGAAGGGTGACGGAATTNGAGAGATTTAAGGGAAGGTCGGAAT
CACTGATTGAAAAAAATATGTTTTCCCCTCTGACCGCTAAATAGAGATAA
GCTATTCCGACCTTTTTATTATTCCCAGGTTTAAGAAGGGTGACGGAATT
AGATGAGAAATGTTATGGTATGCTAGACACTTGACTCAATTTTATCATCA
TTATTGGAAGAAATAAGTAGAAAAATACAAAAAAAATTATAGGACGTTCA
ATTTAACCCCCTTTAACCGCAACCCTTTAGTTTATTGTTAATTGTTCATT
AAAAGAACTACAGTTGACACCCTCTAATTCGATTTTCAGCGGAAATTGGA
TTTCCATCGAGTGCGTTTCGAATAGTAGAGCGTCGTTCAGGAGAATTTAT
TGTTGACTGTGACTTTCAATATTATCGAATAATGAAGTGTATCGAATAGT
AGAATATCGAATTAGAGAGCGTCAACTGTAATTCACAAACAATAACATAC
CGTTCAAATTAACAGCAATTAACATTTGTTGCCAGCTCTCTTCCCAGCTG
ACACACGTCGTTGTTTCAACGTTCATATAACGTTATATGGACGTTGTGAA
CGTTAGATAAACGTTGAAACAACGTTCGTAACAATTTTTAGAAAGAAAAA
CAAGAATACTTTGCAATCAGTTTATTCGTTCGTCAACTATGGACGGATGA
GAACTTGGTATGGGATCCAGCCAATTACAGTGGTGTTGAAACCATCAATG
TATCACCAAGACAAGTCTGGTTACCAGACCTGGTATTGTACAATAAGTAA
GTTTTCGTAGCCTCCAATTGCCGCACGGGCATTTTTTTCCCCGTTTTACC
ACCCTAAAACAACCGTCCCAGTCTTTTTTTCGCACGAATAGACAATAGAA
AAAGTTGTAAAAAAAGGATTGGATCGAGTTTAGGGGGGTAATTAAATGAT
AAAGGAGCACGCTCCTGACCGCACGACTACGGTTGAAAAGGTGTATTACG
TTATGTATAAATTTCCCCACGTGGTCTTGATGTCACAGGACGAATAGGAC
GAGTTTACCAGGGGACATTCAGGTCAAAAGTTCGTGCCTATGAGAAAATT
TATGCAAACAAACCCCCTCCCCAATCCTTATGCAAAGCCCTAGACTCGAT
GTCCCAGGGGATAGGGACAAAAAGTTTCCGAAAGAGGAATGGCGTCAAAA
GGTAGTGTCTATGAGAACATCATTGCAACAAAAAGACCGTAGATTAATAG
AAAAAGTTCAAAACAAAGAAACATAACTCTAAACATTTGGCGTCCATCTA
CCTAGCAAAATCCAGCCTAATCTATCTAATCTAACCTATTACCCTAGGCT
GCAAGCTGCAGTACCGTTCTTCGGGGGGGGGGGGGGGACTTAAGCTAAAA
TGGGTACGGGATGTGCAGCTGGTCAAGGTACCTTTTTCACTTCCATGAGA
CCAAGGTAGGGTCGCAAAAACACAAAAATAGAAAAAATAGTCCCTCATAG
GGTGCTTTTCTGTCGGAACTTGGAAAAAATTTTGGAATTTTAGTCCCATT
ATTCAGGGTCACTTTTTTCAAAAAACGACTCCCACGTAGTTTCCGTTTTT
CAAACATCAGCGCGTCGGTCGGCAAGGGTAGTACCCCCGGTCCGTTTTTA
CTTGTTGTAATGGTATAAAATTTCATAATTTAGTGTTGACGAAGACAAAT
CATTTGGTGGCAGTTTAGATCAGCTGAACAATCGAGTCATCGTTAGGAAT
GATGGTTCCATTAAATGGCTGACACCTGCCATCTTCCGTGCAAAATGTGG
AATGAATGTCGAATTTTTCCCTTTCGATACACAAATTTGTACGCTAAAGT
TTGGTAGTTGGACTTATAATGGTTTTCAAATTGATCTAAAAAATTTGACT
CGTGATGTTGATTTTGGTGAGTTTGAATGTCGCTGTCCGTGATTTTGTAT
GTCCGTCTTTGAAAAATCAGCGCCTTGCCAATTCAAGTTCCTTTTGGAAA
AAAATGTACCCTGTAAAAATCAACCAGGATAATCAATAGCTATGTCGCTT
GGCCTTCATGCCGATTTGACCTCTTGCTTTAATTTCAACTTTCTCATTTC
AGCCTCTTATTCCAAGCATTCAGAATGGCTTATCACCGACGGATACTTAC
GTCGAAACGTAGTGACGTATACGTGTTGTCCGGAACCTTTTCCCGACGTA
ACTGTAACCTTAACATTGAAACGAAGATCATTATTTTATCTGATGAATCT
CATCTTCCCGATGGTTGTAATCAGCATGTTGACAATGTTATCTTTTTATC
TGCCAGCTGAATCAGGTAACTACGATCATGGTCAAAATAAATCGGGATTT
CTGAGTATTTCGTCGTTTTTCAAAATTTCAAGTTTTGCGAGAATCGCAAT
TTCAGCCCTTCCACTTCTTATGTTATTGAGGGGGTTATTTGGGAAGGGTT
TATCGGCTTTCAGGCTTTCTTCTAAGCCTTATTGGACCATTTTTGAATTT
TTAGATCTTAAGATCCCAAGGTCTTATGTCTTAAGTCTCGTGTTAAAACT
CTAATGATACATTAAATTGTAATTCAACCTTTCGTCCTGAGTTATAACCA
AATTTATGAGTATGTATAAATTTGTATAATCAGCAATATATAGTGTTTGA
AGTCTGCAGCTTAGGAACAATTAAACTCATCATTAGTTTATTCATTTTTG
CAGGTGAACGAATCGCACTTGCTATTACCTTACTGCTCGCCATGACTGTT
TTCATGTTGATCGTCGGTGAGATCATACCTCCAACATCTGACAGTGTTCC
TCTTGTCGCCACCTTTTTCAGTGCTGTCATGTTGGAAATGGTTCTTATGG
TTGTCATACTATGTTATGTTCTAAAATTCCATTTCAAGACCAAGGAAGAT
GAGATGCCACGCTGGATGAGACGTCTGGTCTATGATAACTTGTCCTACAG
TTTGGGAATTCGNCACGCTGGATGAGACGCCTGATCCTTGATAACTTGTC
CTACAGTTTGGGAATTCGTCCTCGATCAAAAAAGAAAGAAAAAACAGAGG
AAACCTTAGGAGATAAAGTGAAAACAGTCCTTGAGTTGAAATCGATTAAT
AGGACAAATGGGATCGGTACCGTAACTGTAGTCCAAAATGGTGTCCTTAC
AAAACATGGCGGCGATATAAACAAAACATTTGAGAATTGCTTTATGCATC
AAAATGTTGATTCAATGAAAGATTCTGATGATAACAGTACAAGATATTTG
GGTCAAAAGTTGGATATTTTCCTGGAGAAGCTATTGTTAGATGAAGAAGA
TGCCAAAGCAAAGGAAGAATGGCGAATATGTGCAATGACCATCGACAGGT
TGTCATTATACATGTTCGGAATCATTTTCGTGGTCACCTCATTGAGTATC
TTTCTCAAAGCACCTGAGTACGTCGCTTGAAAGTTGGGACAGTATATCAA
AGATGTAGAATGAGCTTTTCCAGAAAAAAACCGTATACCCCCTTTTGATG
AGGTTCAAACTTTTGTGAATGCTGAAATCTCTTGGAATTTTTGGTAATTT
GAGGCTTAAACCTTTCTGGAGTTTTAAATTTTTGAAGAGTTACCCTCATG
GAGTTCCGGCTTAATTGACAGATTTTTATATGTCCCTATATGGAATTCCG
GCACACGACAAAACCTAACCCCTTGAGACGGAGCTGGACATCCCCAGAAG
ACGGTATACGGTTTGTATTCTCTGGAAAAACCCAAGC

Coding sequence (CDS) from alignment at sc0000600:66525..79761-

>TCONS_00027018 ID=TCONS_00027018|Name=TCONS_00027018|organism=Clytia hemisphaerica|type=CDS|length=6498bp|location=Sequence derived from alignment at sc0000600:66525..79761- (Clytia hemisphaerica)
GTGAACGAATCGCACTTGCTATTACCTTACTGCTCGCCATGACTGTTTTC
ATGTTGATCGTCGGTGAGATCATACCTCCAACATCTGACAGTGTTCCTCT
TGTCGCCACCTTTTTCAGTGCTGTCATGTTGGAAATGGTTCTTATGGTTG
TCATACTATGTTATGTTCTAAAATTCCATTTCAAGACCAAGGAAGATGAG
ATGCCACGCTGGATGAGACGTCTGGTCTATGATAACTTGTCCTACAGTTT
GGGAATTCGNCACGCTGGATGACCTCTTATTCCAAGCATTCAGAATGGCT
TATCACCGACGGATACTTACGTCGAAACGTAGTGACGTATACGTGTTGTC
CGGAACCTTTTCCCGACGTAACTGTAACCTTAACATTGAAACGAAGATCA
TTATTTTATCTGATGAATCTCATCTTCCCGATGGTTGTAATCAGCATGTT
GACAATGTTATCTTTTTATCTGCCAGCTGAATCAGTGTTGACGAAGACAA
ATCATTTGGTGGCAGTTTAGATCAGCTGAACAATCGAGTCATCGTTAGGA
ATGATGGTTCCATTAAATGGCTGACACCTGCCATCTTCCGTGCAAAATGT
GGAATGAATGTCGAATTTTTCCCTTTCGATACACAAATTTGTACGCTAAA
GTTTGGTAGTTGGACTTATAATGGTTTTCAAATTGATCTAAAAAATTTGA
CTCGTGATGTTGATTTTGAAAGAAAAACAAGAATACTTTGCAATCAGTTT
ATTCGTTCGTCAACTATGGACGGATGAGAACTTGGTATGGGATCCAGCCA
ATTACAGTGGTGTTGAAACCATCAATGTATCACCAAGACAAGTCTGGTTA
CCAGACCTGGTATTGTACAATAATATCGAGTTCACGCAACGGAGAATCTA
GACTAGTGGAGGATCTTTTTCGTAACTATAACAAGGAAGCCAGACCTGTA
CTCAACGATTCAACAATACTTACCCTCAATCTTGGTATAGCTCTCCATCA
ACTAATCGAAGTGATGTTTGGGTTTGCAAAGATTAACTATCTATTGATCA
ATATCTTACTGGTCAATCTGCCAATATCATACAGTGAACGAATCGCACTT
GCTATTACCTTACTGCTCGCCATGACTGTTTTCATGTTGATCGTCGGTGA
GATCATACCTCCAACATCTGACAGTGTTCCTCTTGTCGCCACCTTTTTCA
GTGCTGTCATGTTGGAAATGGTTCTTATGGTTGTCATACTATGTTATGTT
CTAAAATTCCATTTCAAGACCAAGGAAGATGAGATGCCACGCTGGATGAG
ACGTCTGGTCTATGATAACTTGTCCTACAGTTTGGGAATTCGNCACGCTG
GATGACCTCTTATTCCAAGCATTCAGAATGGCTTATCACCGACGGATACT
TACGTCGAAACGTAGTGACGTATACGTGTTGTCCGGAACCTTTTCCCGAC
GTAACTGTAACCTTAACATTGAAACGAAGATCATTATTTTATCTGATGAA
TCTCATCTTCCCGATGGTTGTAATCAGCATGTTGACAATGTTATCTTTTT
ATCTGCCAGCTGAATCAGTGTTGACGAAGACAAATCATTTGGTGGCAGTT
TAGATCAGCTGAACAATCGAGTCATCGTTAGGAATGATGGTTCCATTAAA
TGGCTGACACCTGCCATCTTCCGTGCAAAATGTGGAATGAATGTCGAATT
TTTCCCTTTCGATACACAAATTTGTACGCTAAAGTTTGGTAGTTGGACTT
ATAATGGTTTTCAAATTGATCTAAAAAATTTGACTCGTGATGTTGATTTT
GAAAGAAAAACAAGAATACTTTGCAATCAGTTTATTCGTTCGTCAACTAT
GGACGGATGAGAACTTGGTATGGGATCCAGCCAATTACAGTGGTGTTGAA
ACCATCAATGTATCACCAAGACAAGTCTGGTTACCAGACCTGGTATTGTA
CAATAATATCGAGTTCACGCAACGGAGAATCTAGACTAGTGGAGGATCTT
TTTCGTAACTATAACAAGGAAGCCAGACCTGTACTCAACGATTCAACAAT
ACTTACCCTCAATCTTGGTATAGCTCTCCATCAACTAATCGAAGTGATGT
TTGGGTTTGCAAAGATTAACTATCTATTGATCAATATCTTACTGGTCAAT
CTGCCAATATCATACAGTGAACGAATCGCACTTGCTATTACCTTACTGCT
CGCCATGACTGTTTTCATGTTGATCGTCGGTGAGATCATACCTCCAACAT
CTGACAGTGTTCCTCTTGTCGCCACCTTTTTCAGTGCTGTCATGTTGGAA
ATGGTTCTTATGGTTGTCATACTATGTTATGTTCTAAAATTCCATTTCAA
GACCAAGGAAGATGAGATGCCACGCTGGATGAGACGTCTGGTCTATGATA
ACTTGTCCTACAGTTTGGGAATTCGNCACGCTGGATGACCTCTTATTCCA
AGCATTCAGAATGGCTTATCACCGACGGATACTTACGTCGAAACGTAGTG
ACGTATACGTGTTGTCCGGAACCTTTTCCCGACGTAACTGTAACCTTAAC
ATTGAAACGAAGATCATTATTTTATCTGATGAATCTCATCTTCCCGATGG
TTGTAATCAGCATGTTGACAATGTTATCTTTTTATCTGCCAGCTGAATCA
GTGTTGACGAAGACAAATCATTTGGTGGCAGTTTAGATCAGCTGAACAAT
CGAGTCATCGTTAGGAATGATGGTTCCATTAAATGGCTGACACCTGCCAT
CTTCCGTGCAAAATGTGGAATGAATGTCGAATTTTTCCCTTTCGATACAC
AAATTTGTACGCTAAAGTTTGGTAGTTGGACTTATAATGGTTTTCAAATT
GATCTAAAAAATTTGACTCGTGATGTTGATTTTGAAAGAAAAACAAGAAT
ACTTTGCAATCAGTTTATTCGTTCGTCAACTATGGACGGATGAGAACTTG
GTATGGGATCCAGCCAATTACAGTGGTGTTGAAACCATCAATGTATCACC
AAGACAAGTCTGGTTACCAGACCTGGTATTGTACAATAATATCGAGTTCA
CGCAACGGAGAATCTAGACTAGTGGAGGATCTTTTTCGTAACTATAACAA
GGAAGCCAGACCTGTACTCAACGATTCAACAATACTTACCCTCAATCTTG
GTATAGCTCTCCATCAACTAATCGAAGTGATGTTTGGGTTTGCAAAGATT
AACTATCTATTGATCAATATCTTACTGGTCAATCTGCCAATATCATACAG
TGAACGAATCGCACTTGCTATTACCTTACTGCTCGCCATGACTGTTTTCA
TGTTGATCGTCGGTGAGATCATACCTCCAACATCTGACAGTGTTCCTCTT
GTCGCCACCTTTTTCAGTGCTGTCATGTTGGAAATGGTTCTTATGGTTGT
CATACTATGTTATGTTCTAAAATTCCATTTCAAGACCAAGGAAGATGAGA
TGCCACGCTGGATGAGACGTCTGGTCTATGATAACTTGTCCTACAGTTTG
GGAATTCGNCACGCTGGATGACCTCTTATTCCAAGCATTCAGAATGGCTT
ATCACCGACGGATACTTACGTCGAAACGTAGTGACGTATACGTGTTGTCC
GGAACCTTTTCCCGACGTAACTGTAACCTTAACATTGAAACGAAGATCAT
TATTTTATCTGATGAATCTCATCTTCCCGATGGTTGTAATCAGCATGTTG
ACAATGTTATCTTTTTATCTGCCAGCTGAATCAGTGTTGACGAAGACAAA
TCATTTGGTGGCAGTTTAGATCAGCTGAACAATCGAGTCATCGTTAGGAA
TGATGGTTCCATTAAATGGCTGACACCTGCCATCTTCCGTGCAAAATGTG
GAATGAATGTCGAATTTTTCCCTTTCGATACACAAATTTGTACGCTAAAG
TTTGGTAGTTGGACTTATAATGGTTTTCAAATTGATCTAAAAAATTTGAC
TCGTGATGTTGATTTTGAAAGAAAAACAAGAATACTTTGCAATCAGTTTA
TTCGTTCGTCAACTATGGACGGATGAGAACTTGGTATGGGATCCAGCCAA
TTACAGTGGTGTTGAAACCATCAATGTATCACCAAGACAAGTCTGGTTAC
CAGACCTGGTATTGTACAATAATATCGAGTTCACGCAACGGAGAATCTAG
ACTAGTGGAGGATCTTTTTCGTAACTATAACAAGGAAGCCAGACCTGTAC
TCAACGATTCAACAATACTTACCCTCAATCTTGGTATAGCTCTCCATCAA
CTAATCGAAGTGATGTTTGGGTTTGCAAAGATTAACTATCTATTGATCAA
TATCTTACTGGTCAATCTGCCAATATCATACAGTGAACGAATCGCACTTG
CTATTACCTTACTGCTCGCCATGACTGTTTTCATGTTGATCGTCGGTGAG
ATCATACCTCCAACATCTGACAGTGTTCCTCTTGTCGCCACCTTTTTCAG
TGCTGTCATGTTGGAAATGGTTCTTATGGTTGTCATACTATGTTATGTTC
TAAAATTCCATTTCAAGACCAAGGAAGATGAGATGCCACGCTGGATGAGA
CGTCTGGTCTATGATAACTTGTCCTACAGTTTGGGAATTCGNCACGCTGG
ATGACCTCTTATTCCAAGCATTCAGAATGGCTTATCACCGACGGATACTT
ACGTCGAAACGTAGTGACGTATACGTGTTGTCCGGAACCTTTTCCCGACG
TAACTGTAACCTTAACATTGAAACGAAGATCATTATTTTATCTGATGAAT
CTCATCTTCCCGATGGTTGTAATCAGCATGTTGACAATGTTATCTTTTTA
TCTGCCAGCTGAATCAGTGTTGACGAAGACAAATCATTTGGTGGCAGTTT
AGATCAGCTGAACAATCGAGTCATCGTTAGGAATGATGGTTCCATTAAAT
GGCTGACACCTGCCATCTTCCGTGCAAAATGTGGAATGAATGTCGAATTT
TTCCCTTTCGATACACAAATTTGTACGCTAAAGTTTGGTAGTTGGACTTA
TAATGGTTTTCAAATTGATCTAAAAAATTTGACTCGTGATGTTGATTTTG
AAAGAAAAACAAGAATACTTTGCAATCAGTTTATTCGTTCGTCAACTATG
GACGGATGAGAACTTGGTATGGGATCCAGCCAATTACAGTGGTGTTGAAA
CCATCAATGTATCACCAAGACAAGTCTGGTTACCAGACCTGGTATTGTAC
AATAATATCGAGTTCACGCAACGGAGAATCTAGACTAGTGGAGGATCTTT
TTCGTAACTATAACAAGGAAGCCAGACCTGTACTCAACGATTCAACAATA
CTTACCCTCAATCTTGGTATAGCTCTCCATCAACTAATCGAAGTGATGTT
TGGGTTTGCAAAGATTAACTATCTATTGATCAATATCTTACTGGTCAATC
TGCCAATATCATACAGTGAACGAATCGCACTTGCTATTACCTTACTGCTC
GCCATGACTGTTTTCATGTTGATCGTCGGTGAGATCATACCTCCAACATC
TGACAGTGTTCCTCTTGTCGCCACCTTTTTCAGTGCTGTCATGTTGGAAA
TGGTTCTTATGGTTGTCATACTATGTTATGTTCTAAAATTCCATTTCAAG
ACCAAGGAAGATGAGATGCCACGCTGGATGAGACGTCTGGTCTATGATAA
CTTGTCCTACAGTTTGGGAATTCGNCACGCTGGATGACCTCTTATTCCAA
GCATTCAGAATGGCTTATCACCGACGGATACTTACGTCGAAACGTAGTGA
CGTATACGTGTTGTCCGGAACCTTTTCCCGACGTAACTGTAACCTTAACA
TTGAAACGAAGATCATTATTTTATCTGATGAATCTCATCTTCCCGATGGT
TGTAATCAGCATGTTGACAATGTTATCTTTTTATCTGCCAGCTGAATCAG
TGTTGACGAAGACAAATCATTTGGTGGCAGTTTAGATCAGCTGAACAATC
GAGTCATCGTTAGGAATGATGGTTCCATTAAATGGCTGACACCTGCCATC
TTCCGTGCAAAATGTGGAATGAATGTCGAATTTTTCCCTTTCGATACACA
AATTTGTACGCTAAAGTTTGGTAGTTGGACTTATAATGGTTTTCAAATTG
ATCTAAAAAATTTGACTCGTGATGTTGATTTTGAAAGAAAAACAAGAATA
CTTTGCAATCAGTTTATTCGTTCGTCAACTATGGACGGATGAGAACTTGG
TATGGGATCCAGCCAATTACAGTGGTGTTGAAACCATCAATGTATCACCA
AGACAAGTCTGGTTACCAGACCTGGTATTGTACAATAATATCGAGTTCAC
GCAACGGAGAATCTAGACTAGTGGAGGATCTTTTTCGTAACTATAACAAG
GAAGCCAGACCTGTACTCAACGATTCAACAATACTTACCCTCAATCTTGG
TATAGCTCTCCATCAACTAATCGAAGTGATGTTTGGGTTTGCAAAGATTA
ACTATCTATTGATCAATATCTTACTGGTCAATCTGCCAATATCATACA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_015175XLOC_015175Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00027018-proteinTCONS_00027018-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00027018-exon-sc0000600-1575043694:79543..79761TCONS_00027018-exon-sc0000600-1575043694:79543..79761Clytia hemisphaericaexon
TCONS_00027018-exon-sc0000600-1575043694:78407..78956TCONS_00027018-exon-sc0000600-1575043694:78407..78956Clytia hemisphaericaexon
TCONS_00027018-exon-sc0000600-1575043694:71007..71112TCONS_00027018-exon-sc0000600-1575043694:71007..71112Clytia hemisphaericaexon
TCONS_00027018-exon-sc0000600-1575043694:70440..70579TCONS_00027018-exon-sc0000600-1575043694:70440..70579Clytia hemisphaericaexon
TCONS_00027018-exon-sc0000600-1575043694:69466..69620TCONS_00027018-exon-sc0000600-1575043694:69466..69620Clytia hemisphaericaexon
TCONS_00027018-exon-sc0000600-1575043694:68346..68578TCONS_00027018-exon-sc0000600-1575043694:68346..68578Clytia hemisphaericaexon
TCONS_00027018-exon-sc0000600-1575043694:67947..68159TCONS_00027018-exon-sc0000600-1575043694:67947..68159Clytia hemisphaericaexon
TCONS_00027018-exon-sc0000600-1575043694:66525..67558TCONS_00027018-exon-sc0000600-1575043694:66525..67558Clytia hemisphaericaexon
TCONS_00027018-exon-sc0000600-1510915933:79543..79761TCONS_00027018-exon-sc0000600-1510915933:79543..79761Clytia hemisphaericaexon
TCONS_00027018-exon-sc0000600-1510915933:78407..78956TCONS_00027018-exon-sc0000600-1510915933:78407..78956Clytia hemisphaericaexon
TCONS_00027018-exon-sc0000600-1510915933:71007..71112TCONS_00027018-exon-sc0000600-1510915933:71007..71112Clytia hemisphaericaexon
TCONS_00027018-exon-sc0000600-1510915933:70440..70579TCONS_00027018-exon-sc0000600-1510915933:70440..70579Clytia hemisphaericaexon
TCONS_00027018-exon-sc0000600-1510915933:69466..69620TCONS_00027018-exon-sc0000600-1510915933:69466..69620Clytia hemisphaericaexon
TCONS_00027018-exon-sc0000600-1510915933:68346..68578TCONS_00027018-exon-sc0000600-1510915933:68346..68578Clytia hemisphaericaexon
TCONS_00027018-exon-sc0000600-1510915933:67947..68159TCONS_00027018-exon-sc0000600-1510915933:67947..68159Clytia hemisphaericaexon
TCONS_00027018-exon-sc0000600-1510915933:66525..67558TCONS_00027018-exon-sc0000600-1510915933:66525..67558Clytia hemisphaericaexon
TCONS_00027018-exon-sc0000600-1491911889:79543..79761TCONS_00027018-exon-sc0000600-1491911889:79543..79761Clytia hemisphaericaexon
TCONS_00027018-exon-sc0000600-1491911889:78407..78956TCONS_00027018-exon-sc0000600-1491911889:78407..78956Clytia hemisphaericaexon
TCONS_00027018-exon-sc0000600-1491911889:71007..71112TCONS_00027018-exon-sc0000600-1491911889:71007..71112Clytia hemisphaericaexon
TCONS_00027018-exon-sc0000600-1491911889:70440..70579TCONS_00027018-exon-sc0000600-1491911889:70440..70579Clytia hemisphaericaexon
TCONS_00027018-exon-sc0000600-1491911889:69466..69620TCONS_00027018-exon-sc0000600-1491911889:69466..69620Clytia hemisphaericaexon
TCONS_00027018-exon-sc0000600-1491911889:68346..68578TCONS_00027018-exon-sc0000600-1491911889:68346..68578Clytia hemisphaericaexon
TCONS_00027018-exon-sc0000600-1491911889:67947..68159TCONS_00027018-exon-sc0000600-1491911889:67947..68159Clytia hemisphaericaexon
TCONS_00027018-exon-sc0000600-1491911889:66525..67558TCONS_00027018-exon-sc0000600-1491911889:66525..67558Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000600supercontigsc0000600:66525..79761 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0	0.0164563	0	0.181226	0.143207	1.39999	1.10677	0.729565	0.595549	1.05409	0.624012	2.50196	2.22484	0.334406	0.339261	1.22361	0.73428	4.04892	4.59139	1.70796	1.90178	1.03075	1.91595	3.66471	4.58348	0.263241	0.561877	0.112922	0.130258
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR006201Neur_channel
IPR006202Neur_chan_lig-bd
IPR006029Neurotrans-gated_channel_TM
IPR018000Neurotransmitter_ion_chnl_CS
Vocabulary: Cellular Component
TermDefinition
GO:0016021integral component of membrane
Vocabulary: Biological Process
TermDefinition
GO:0006811ion transport
Vocabulary: Molecular Function
TermDefinition
GO:0005216ion channel activity
GO:0005230extracellular ligand-gated ion channel activity
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006811 ion transport
cellular_component GO:0016021 integral component of membrane
molecular_function GO:0005230 extracellular ligand-gated ion channel activity
molecular_function GO:0005216 ion channel activity
Blast
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BLAST of TCONS_00027018 vs. Swiss-Prot (Human)
Match: ACH10 (Neuronal acetylcholine receptor subunit alpha-10 OS=Homo sapiens GN=CHRNA10 PE=1 SV=1)

HSP 1 Score: 254.218 bits (648), Expect = 1.062e-74
Identity = 128/329 (38.91%), Postives = 197/329 (59.88%), Query Frame = 2 
Query:  902 RLVEDLFRNYNKEARPVLNDSTILTLNLGIALHQLIEVKEKQEYFAISLFVRQLWTDENLVWDPANYSGVETINVSPRQVWLPDLVLYNNVDEDKSFGGSLDQLNNRVIVRNDGSIKWLTPAIFRAKCGMNVEFFPFDTQICTLKFGSWTYNGFQIDLKNLTRDVDFASYSKHSEWLITDGYLRRNVVTYTCCPEPFPDVTVTLTLKRRSLFYLMNLIFPMVVISMLTMLSFYLPAESGERXXXXXXXXXXMTVFMLIVGEIIPPTSDSVPLVATFFSAXXXXXXXXXXXXCYVLKFHFKTKE-DEMPRWMRRLVYDNLSYSLGIRHAG 1885
            +L  DLF NY    RPV +    L + L + L Q+I++ E+ +   + L++RQ WTD  L WDP  Y G++ I +    VW PD+VLYN  D       S +     V++R+DG+++W  PAI R+ C ++V  FPFD Q C L FGSWT+ G Q+D++        A + ++ EW +     RR V+TY CC EP+PDVT TL L+RR+  Y+ NL+ P V+IS+L  L+F+LPA+SGE+++L +T+LLA+TVF L++ E +PP ++SVPL+  ++ A M  +     +   ++  H+       +P W R L+  +L+  L +R  G
Sbjct:   32 KLFRDLFANYTSALRPVADTDQTLNVTLEVTLSQIIDMDERNQVLTLYLWIRQEWTDAYLRWDPNAYGGLDAIRIPSSLVWRPDIVLYNKADAQPPGSASTN-----VVLRHDGAVRWDAPAITRSSCRVDVAAFPFDAQHCGLTFGSWTHGGHQLDVRPRGAAASLADFVENVEWRVLGMPARRRVLTYGCCSEPYPDVTFTLLLRRRAAAYVCNLLLPCVLISLLAPLAFHLPADSGEKVSLGVTVLLALTVFQLLLAESMPP-AESVPLIGKYYMATMTMVTFSTALTILIMNLHYCGPSVRPVPAWARALLLGHLARGLCVRERG 354
The following BLAST results are available for this feature:
BLAST of TCONS_00027018 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
ACH101.062e-7438.91Neuronal acetylcholine receptor subunit alpha-10 O... [more]
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