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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00026984 ID=TCONS_00026984|Name=TCONS_00026984|organism=Clytia hemisphaerica|type=transcript|length=1955bp
GCTGAGTATCTGTGAGAGAGCCATTGGCTTCCATGTGATTGATGACATGA
CTGTGTATAACATGTTCTAACACTTTACATGTGACTGATGTTAGGCTGAT
AGGGCGGTAATTTTCTGCTTTCGAGCGGTTCTTGCTCCCACCTTTGTAAA
GGTGATAATAGGAATAAGGCTAATACCATGATAGTTGTTAGGGTCACTTA
ACGACTTCTTGTAGGATTTAACCAGCGGAATCAGGATTGAAGTACCTAGT
TGGCTCGGTAAATGTGGCAATGAAAACAGTTTGTTAATTAGGTCTGTCAG
GTATGATTTGATGGTCGGGCTTTTCGCACAGAGAAAATGTTCGGCTTTGA
GCTGAAAAGGATCCCTAGACTTTCCGAATTTCAATCGACTGAGAGCGTTT
GCTACATTAGATTCAGTTACGTAAAAATCATCTGAAGGATCATGGTTAAT
CTGTTGTAGAATTTCGTTGAGTTTTAGATTGGTTTCTGCATTGTCAGTAT
TTGGAACGCGTGGGGTGTTTAACAAGTTATTAAAATGAGAGAGGAATTCA
GCTGTAATATCTGATTTGTTGGATTTACCGTTTATTGTATAAAGTTTTTG
GTCAGTATTTCTCAGGGATCTTTTCCAGTAGGTTTCCGGTTTAACGTCCT
TCAATTTATCAATGTTGATGTAGTGTCTGGCGGTATCATTGCTTTTGGCA
CGTTTTACGTGATAACGAAAGGATTTGCGTGCAAATCTATATCGACAATA
TGAGGTGTTAGTAGGGGATTTTGGGAAACCATTATGTTTCCAGATATTGA
ACATTGAGCGTAGGATTTTGTGAACTTTCCGGATATCGTCGTTCCACCAA
GGTTTGGATTGAAAAATATATGCGGTTTCTTGGAAAGACTTGCAGGCTTC
ACTTGCACACGAACGGAGGGTGAAGTGGAATTGGTCTAACGAATCATCAG
AACTAAAGTCAAGTTTGCCGAAGGCTGTGGTGACGCAAGAGCGGTAGAGA
TCaacaaatttgtcatttttccaaAGGTGGTTAGGAACAAAGTCAGAATT
AAGGGTAGTATTAAAATAGTCACCTTCATCATTTGTTGCNAACTAAAGTC
AAGTTTGCCGAGGGCTGTGGTGACGCAAGAGCGGTAGAGATCaacaaatt
tgtcatttttccaaAGGTGGTTAGGAACAAAGTCAGAATTAAGGGTAGTA
TTGAAATAGTCACCATCATCATTTGTTGTTGGTGTGAACGGTGTGTGAAA
TATAGCTGATACCGGAAGGTGGTCGCTGGTGTTAACAGGGTCAGGATCAT
GCACCGATACTTTGATGACAGTTTCTATAGATGATGCAGGAACCAAGATA
TGATCTATATACGACGAGTTTGCTAGGGAGAAGTGTTGATATGTGTATTT
GGGGCCATCACCATTAGTAATGTCGATTGGTAACAGTTCGTTTTCATTGA
TAAAGTCTGAGAGATATTTGGATAGAATGTTGGGTTTGCCAGATCGAATC
GAGTTAGGGGTCGCAGGCCAGCTTTGGAAGTCCATGTTCTTGTTGTGTGG
CTGGGTGGAAGATAATTGTAAAGTCTCCTTTAAAATGATGTAGTAAATGA
TATTCACTTTGGGTGAGCCATAGCTCTGATAATGATAAGCAGTCATATGA
TTTAGAAAGGTTGTTAACATATGGACAATTTCCTTTATAGCCATACCAAT
TAAGAGAAATAAAACTTGTCGAATCAGTGTTAGCACTAAACATGGTTATA
ATTGGTGAAATGTTTGTTCCTGGGGCTAGCATGTTGGAAGGATAAGTCGT
AACGGTTGTCAGGGATCAGTGGGCGAAGGGATTGTTCTTCGTGGTAGTAG
GGTTTGTCGGTTGGGAACTGGTCGTGATGGCGATAATGGTTGTCATGGGG
GACGTTCAAGGAATATCTTCGATGTTTGGGGTGACAAAAGGGTTTCACAA
TCAGT Run BLAST on NCBI transcript from alignment at sc0000597:116255..118209 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00026984 ID=TCONS_00026984|Name=TCONS_00026984|organism=Clytia hemisphaerica|type=transcript|length=1955bp|location=Sequence derived from alignment at sc0000597:116255..118209 (Clytia hemisphaerica)
ACTGATTGTGAAACCCTTTTGTCACCCCAAACATCGAAGATATTCCTTGA
ACGTCCCCCATGACAACCATTATCGCCATCACGACCAGTTCCCAACCGAC
AAACCCTACTACCACGAAGAACAATCCCTTCGCCCACTGATCCCTGACAA
CCGTTACGACTTATCCTTCCAACATGCTAGCCCCAGGAACAAACATTTCA
CCAATTATAACCATGTTTAGTGCTAACACTGATTCGACAAGTTTTATTTC
TCTTAATTGGTATGGCTATAAAGGAAATTGTCCATATGTTAACAACCTTT
CTAAATCATATGACTGCTTATCATTATCAGAGCTATGGCTCACCCAAAGT
GAATATCATTTACTACATCATTTTAAAGGAGACTTTACAATTATCTTCCA
CCCAGCCACACAACAAGAACATGGACTTCCAAAGCTGGCCTGCGACCCCT
AACTCGATTCGATCTGGCAAACCCAACATTCTATCCAAATATCTCTCAGA
CTTTATCAATGAAAACGAACTGTTACCAATCGACATTACTAATGGTGATG
GCCCCAAATACACATATCAACACTTCTCCCTAGCAAACTCGTCGTATATA
GATCATATCTTGGTTCCTGCATCATCTATAGAAACTGTCATCAAAGTATC
GGTGCATGATCCTGACCCTGTTAACACCAGCGACCACCTTCCGGTATCAG
CTATATTTCACACACCGTTCACACCAACAACAAATGATGATGGTGACTAT
TTCAATACTACCCTTAATTCTGACTTTGTTCCTAACCACCTttggaaaaa
tgacaaatttgttGATCTCTACCGCTCTTGCGTCACCACAGCCCTCGGCA
AACTTGACTTTAGTTNGCAACAAATGATGAAGGTGACTATTTTAATACTA
CCCTTAATTCTGACTTTGTTCCTAACCACCTttggaaaaatgacaaattt
gttGATCTCTACCGCTCTTGCGTCACCACAGCCTTCGGCAAACTTGACTT
TAGTTCTGATGATTCGTTAGACCAATTCCACTTCACCCTCCGTTCGTGTG
CAAGTGAAGCCTGCAAGTCTTTCCAAGAAACCGCATATATTTTTCAATCC
AAACCTTGGTGGAACGACGATATCCGGAAAGTTCACAAAATCCTACGCTC
AATGTTCAATATCTGGAAACATAATGGTTTCCCAAAATCCCCTACTAACA
CCTCATATTGTCGATATAGATTTGCACGCAAATCCTTTCGTTATCACGTA
AAACGTGCCAAAAGCAATGATACCGCCAGACACTACATCAACATTGATAA
ATTGAAGGACGTTAAACCGGAAACCTACTGGAAAAGATCCCTGAGAAATA
CTGACCAAAAACTTTATACAATAAACGGTAAATCCAACAAATCAGATATT
ACAGCTGAATTCCTCTCTCATTTTAATAACTTGTTAAACACCCCACGCGT
TCCAAATACTGACAATGCAGAAACCAATCTAAAACTCAACGAAATTCTAC
AACAGATTAACCATGATCCTTCAGATGATTTTTACGTAACTGAATCTAAT
GTAGCAAACGCTCTCAGTCGATTGAAATTCGGAAAGTCTAGGGATCCTTT
TCAGCTCAAAGCCGAACATTTTCTCTGTGCGAAAAGCCCGACCATCAAAT
CATACCTGACAGACCTAATTAACAAACTGTTTTCATTGCCACATTTACCG
AGCCAACTAGGTACTTCAATCCTGATTCCGCTGGTTAAATCCTACAAGAA
GTCGTTAAGTGACCCTAACAACTATCATGGTATTAGCCTTATTCCTATTA
TCACCTTTACAAAGGTGGGAGCAAGAACCGCTCGAAAGCAGAAAATTACC
GCCCTATCAGCCTAACATCAGTCACATGTAAAGTGTTAGAACATGTTATA
CACAGTCATGTCATCAATCACATGGAAGCCAATGGCTCTCTCACAGATAC
TCAGC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00026984-exon-sc0000597-1491911889:116255..118209 | TCONS_00026984-exon-sc0000597-1491911889:116255..118209 | Clytia hemisphaerica | exon |
| TCONS_00026984-exon-sc0000597-1510915933:116255..118209 | TCONS_00026984-exon-sc0000597-1510915933:116255..118209 | Clytia hemisphaerica | exon |
| TCONS_00026984-exon-sc0000597-1575043694:116255..118209 | TCONS_00026984-exon-sc0000597-1575043694:116255..118209 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000597 | supercontig | sc0000597:116255..118209 . |
Blast
The following BLAST results are available for this feature:
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