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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00026974 ID=TCONS_00026974|Name=TCONS_00026974|organism=Clytia hemisphaerica|type=transcript|length=3558bp TTGTCAACCATTATTTTATGTTTGGATTACTCATGCAAGCTATGTCACAA TCAAGATTACATATCTTTCACTGATGGCTTCGGTTAGGGGTATATCTGGC AGGAAGGAGATAAAACAACAAACAGGACCTAAATCAACAGTGTTGTTTTT CCCTGATAAAAAGCAGTTATGTGGATCACTTGTGCAACAATCCAAGAAAT GTCCAGGATTAGAGACTTGTTTGTTTGGACATAAAGAAACATCACTTTGG AAACTGATTGATACACTTGAGTCAAGTCAATTTAAACTTGATGTTTGTGT TTTCGTAATAACTTCACAAGATTTAGCAGACATTCTGATTAAGAAACACA AAGAGGGTATTATAGTTCGTATTGTGACTGACTGTGAAAAAATGGACCTG AATTGCTCACAAATAGAACAAATGCGTGCCAAAGATAACCAAAGAAGAAT AATAAAAGTCAGCGTTAAAAACACAGCAACAAAATGTTGGCTTTGAATTT GAGCCGTGTAGACTATCTTCAGGTGGGAGTAACGTCCAATAAATGTATGA GTGTTATTCCCACAGCAGGTGGATCTTCATCCAAACCTACCACTCAGCGT ATTGTAGTTGGTGATTATGAAGGGGTTGTTACTTGTTTCAACATCAAGAA ACATGTACCAAACATCTCATTCAAAACTTTACCgctaaacaacaaaatat taCGGTTATGCATGGGAGCAAGAGCTGGACCGCTTATGGAGAAAGTTTAT GTATGTTCTGGAAATGAAGTTTATGGTTTCAATAAAAAGGgaaaaggttt tttgaaatttgatagtAATTTGACTGAATCAATTCAAACAATGTATGCTG ATAACTTGGATTTGTATCTTTGtggaaaatatatttgcaaTCATTATCAT GATTGCATTGATTCAAACTACTATCTTTCACCAGATCTAATCAATGATat tgtagttttgccagaatcTGGTGGTCACAAACCAATGCCTATCTTAGCAT GCCAAGACCGTGTTTTGAGAGCTTTGAATGGATCTGACCTGTACTATGAA GTAGAAATTCCTGGATCGCCTTCAGTAGCTGTTCTTGGAAGTCAAGCAGA GAACGGTGCTGATAGTGTTGTATATGGTACCGCCGATGGCAAAATTGGTT TAGTGCAGTTGAATGCCAGTGCTCCAGAGCATGTCTGGGAGATCGGTAAT GAGAAGCAATCTGGTGATGTTTTGTCTTTGGATCTCTATGACGTGTCCAG TAATGGCACCAAAGATTTATTAGTTGGGCGTGCAGATGGTGTGATTGAAG TGTATGGTTTTGACGAGGGAAGTAATCCATTTCAACATTACAAATATACA CTTTCAGAAAGCATAACTGCAGTTTCTGGCGGCTCTGTCTGTGCTCCTGG GTATCAAGAGGTAGCCGTTTCTACCTATACTGGATGGATTCTTGGTCTAA CTTCAGAACCACAGCAAAGACAGACTGGTATGCAAGGTAGTAACACAAAT GACCCTGTGACAGCCGAAATCAAACAGAAGATCACAGACCTCAATGCTGA AATTGAGGAACTTCAAGGCCTTGTGCTTAAAGAACGCGATAAGTATCAAC AAACTGCTAATTCTAAAACAGCCGTGTCTGCAGTACCCATGTTTGAAATT AATGATCGATTCCAGTTGAATCACGGGGATGCCAGCTATACATTGAGCAT TGAAGTTTTAATGCCCATTGATATCATATTACTTCAAAGCGATGTACCAG TAGATCTGTTGGATGTTGAGAAGAATTCAGCGGTTGTTTCTTACAGTAGT TGTGATCCGGAGAGTGGTAATTTCTTATTGGCTACCTATCGTTGTCAAGC AAACACAACAAGATTGGAGTTGAAAATCAGGACAATTGAAGGGCAGCATG GACATCTACAAGCCTACATTACGCCACGCCTTCAGCCCAAAACATGCATT ATGaaacaatatcaaatcaaaccTTTATCGTTACACCAGAGATCTCATGT TTTTGACCAAGACAGACCTCACAATGAATTGAAGCTAAGTGGACAATTCA GTCAAGCTGAAATACATTCCTGGGTTTATCACGCCCTACCGGAAGTCCCT GAAAGAGTTCCAATGGAAAATGAGATTTCCTTTTactttgtttcaacgtt tttggaCACTCAACTTGAATGCCGGTACAGCAAAGGCCAAGCAACATTTC GTTCTGACAACATTTCCACCATTTCCATCTTGAAAGACGTATTATCAAAG GAAGCTACGAAACGAAAAATGAATCTAAACATATCTTGTGATCTCAACGA AGACTCCATTCCTAATGTTTTATACAGAATCCACCCAAAGCTTGAATATC AACTTCTCTTAGCAAAGAGGGTCCAACTAATTGATGGTCTAAAGGAGCTG GAAACCTATGAGGGCAATGTGGATTTCTTGACAGAGGAATACcgtgaaat tttggaaaatgcTGATATTCTACAAGCAGAATTCAAGAAGCAGCCTTGTC ATTTGGAACGTCTCTACGGAATGATTACAGATTTGTATATTGACCGACAT AAATTCAAAGGCcagaatgtgaaaaataaagtcTCACAGTTAATTTCCAT TTTGGATAACTATGACTTGGATTCGCTCTTAGAGTTTTTTCAAGAATCTT GATATagtttaaaaagtgaaaatgagGTACTACTGATATCCTAGATGAAA ATATTTGTTGCAAACTTTTAGAGCATTTGTCGATACAGAGGATTTCAAAT tgctgtttgttttttgtttttttttgcatggAAATAAACCTCTAGGGACA AATAATGATTGATTTTCTATGGTGAGCCTCTTCTGGGTTACCAGTAATCA AAGATCAACacctttgatttttaaggcacGTATCAAATGGGTGTTTTTTT AAAGGATGGAACCAAAATATGAAATTGCGACGAGTTTTAAAGGCGTGATT GATCTACTGATGTGaattaagttttgtttttatttcggGTTTTTATTCAG ACTTAGATGCAAGTTTTCAATAGagaaaatagattttaattGCTAAACAA AGTCTCttgcaaaattttgaattttagaaaatttgtcaagcgaaaatgaa aacaagataTTTGATTTGTTGCCATtaataaaacatattttttccaaTGT ATCTCGTAGTGTCTCTAGCTAGCCAGGTATTGTGGAGCAGTGGAaacttt tcacaaaatttaatgtGAAAATGCTACGTTTCTAACATCATTATGTTAAA ATCAGATAATTCAATAATATATtacgatttgaaatttttagcaCTTGTAC ATAAAAAACgatatattataaattattctAGCCATAGGGGTGTGTAACAT GCACATATTAAACGTGTGGTTTTTAAAAGCAGGTCTGAAACTTGTAtata atattgtaaaaaatttgtCACAAAAAACTGTATGATAACAGACTAGTATT CATAGTATTAAAGccttccaagaattttcaaaattttccacccaatacgt cattttttctattgtttaagtgacttattgggtggaaaattttaaaagtt ctcagaag Run BLAST on NCBI protein sequence of TCONS_00026974-protein >TCONS_00026974-protein ID=TCONS_00026974-protein|Name=TCONS_00026974-protein|organism=Clytia hemisphaerica|type=polypeptide|length=722bp
MLALNLSRVDYLQVGVTSNKCMSVIPTAGGSSSKPTTQRIVVGDYEGVVT CFNIKKHVPNISFKTLPLNNKILRLCMGARAGPLMEKVYVCSGNEVYGFN KKGKGFLKFDSNLTESIQTMYADNLDLYLCGKYICNHYHDCIDSNYYLSP DLINDIVVLPESGGHKPMPILACQDRVLRALNGSDLYYEVEIPGSPSVAV LGSQAENGADSVVYGTADGKIGLVQLNASAPEHVWEIGNEKQSGDVLSLD LYDVSSNGTKDLLVGRADGVIEVYGFDEGSNPFQHYKYTLSESITAVSGG SVCAPGYQEVAVSTYTGWILGLTSEPQQRQTGMQGSNTNDPVTAEIKQKI TDLNAEIEELQGLVLKERDKYQQTANSKTAVSAVPMFEINDRFQLNHGDA SYTLSIEVLMPIDIILLQSDVPVDLLDVEKNSAVVSYSSCDPESGNFLLA TYRCQANTTRLELKIRTIEGQHGHLQAYITPRLQPKTCIMKQYQIKPLSL HQRSHVFDQDRPHNELKLSGQFSQAEIHSWVYHALPEVPERVPMENEISF YFVSTFLDTQLECRYSKGQATFRSDNISTISILKDVLSKEATKRKMNLNI SCDLNEDSIPNVLYRIHPKLEYQLLLAKRVQLIDGLKELETYEGNVDFLT EEYREILENADILQAEFKKQPCHLERLYGMITDLYIDRHKFKGQNVKNKV SQLISILDNYDLDSLLEFFQES Run BLAST on NCBI transcript from alignment at sc0000597:188332..194143- Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00026974 ID=TCONS_00026974|Name=TCONS_00026974|organism=Clytia hemisphaerica|type=transcript|length=5812bp|location=Sequence derived from alignment at sc0000597:188332..194143- (Clytia hemisphaerica) TTGTCAACCATTATTTTATGTTTGGATTACTCATGCAAGCTATGTCACAA
TCAAGATTACATATCTTTCACTGATGGCTTCGGTTAGGGGTATATCTGGC
AGGAAGGAGATAAAACAACAAACAGGACCTAAATCAACAGTGTTGTTTTT
CCCTGATAAAAAGCAGTTATGTGGATCACTTGTGCAACAATCCAAGAAAT
GTCCAGGATTAGAGACTTGTTTGTTTGGACATAAAGAAACATCACTTTGG
AAACTGATTGATACACTTGAGTCAAGTCAATTTAAACTTGATGTTTGTGT
TTTCGTAATAACTTCACAAGATTTAGCAGACATTCTGATTAAGAAACACA
AAGAGGGTATTATAGTTCGTATTGTGACTGACTGTGAAAAAATGGACCTG
AATTGCTCACAAATAGAACAAATGCGTGCCAAAGGTATACAAGTACGACA
CGATAAAACTTCATATTTCATGCATCATAAATTTGCCCTTGTTGATGATA
AATTTCTTGTTAACGGCTCTTTTAATTGGACTAAACAAGCAATAACTGGG
AACCAAGAAAATGTGATCATATCAGCTGAGAAAGATTTGATCACACCTTA
TAAAAAACAGTTCGAAAAACTCTGGAATATGTATAAACCGGGTTCTCAAC
AGTGACTTAAAAAACTTTTTTACATTTTGTCCAATATTTTTATTGTGTAT
ATTTTAATTTTTAATATGTAAAATTACATGAAATTACAATATTGAATAAA
GTGCTTTATGTTGTAGTTGAAAAAAACCTAAAGATTTAGAAGCCCTATAT
CCTCAATTGAACTTTTGTTTTGAAAATACTACGTTCAGTACATTAAACAA
TGAATTATTTTCTATTCTGTTTAGATAACCAAAGAAGAATAATAAAAGTC
AGCGTTAAAAACACAGCAACAAAATGTTGGCTTTGAATTTGAGCCGTGTA
GACTATCTTCAGGTGGGAGTAACGTCCAATAAATGTATGAGTGTTATTCC
CACAGCAGGTGGATCTTCATCCAAACCTACCACTCAGCGTATTGTAGTTG
GTGATTATGAAGGGGTTGTTACTTGTTTCAACATCAAGAAACATGTACCA
AACATCTCATTCAAAACTTTACCGCTAAACAACAAAATATTACGGTTATG
CATGGGAGCAAGAGCTGGACCGCTTATGGAGAAAGTTTATGTATGTTCTG
GAAATGAAGTTTATGGTTTCAATAAAAAGGGAAAAGGTTTTTTGAAATTT
GATAGTAATTTGACTGAATCAATTCAAACAATGTATGCTGATAACTTGGA
TTTGTATCTTTGTGGAAAATATATTTGCAATCATTATCATGATTGCATTG
ATTCAAACTACTATCTTTCACCAGATCTAATCAATGATATTGTAGTTTTG
CCAGAATCTGGTGGTCACAAACCAATGCCTATCTTAGCATGCCAAGACCG
TGTTTTGAGAGCTTTGAATGGATCTGACCTGTACTATGAAGTAGAAATTC
CTGGATCGCCTTCAGTAGCTGTTCTTGGAAGTCAAGCAGAGAACGGTGCT
GATAGTGTTGTATATGGTACCGCCGATGGCAAAATTGGTTTAGTGCAGTT
GAATGCCAGTGCTCCAGAGCATGTCTGGGAGATCGGTAATGAGAAGCAAT
CTGGTGATGTTTTGTCTTTGGATCTCTATGACGTGTCCAGTAATGGCACC
AAAGATTTATTAGTTGGGCGTGCAGATGGTGTGATTGAAGTGTATGGTTT
TGACGAGGGAAGTAATCCATTTCAACATTACAAATATACACTTTCAGAAA
GCATAACTGCAGTTTCTGGCGGCTCTGTCTGTGCTCCTGGGTATCAAGAG
GTAGCCGTTTCTACCTATACTGGATGGATTCTTGGTCTAACTTCAGAACC
ACAGCAAAGACAGACTGGTATGCAAGGTAGTAACACAAATGACCCTGTGA
CAGCCGAAATCAAACAGAAGATCACAGACCTCAATGCTGAAATTGAGGAA
CTTCAAGGCCTTGTGCTTAAAGAACGCGATAAGTATCAACAAACTGCTAA
TTCTAAAACAGCCGTGTCTGCAGTACCCATGTTTGAAATTAATGATCGAT
TCCAGTTGAATCACGGGGATGCCAGCTATACATTGAGCATTGAAGTTTTA
ATGCCCATTGATATCATATTACTTCAAAGCGATGTACCAGTAGATCTGTT
GGATGTTGAGAAGAATTCAGCGGTTGTTTCTTACAGTAGTTGTGATCCGG
AGAGTGGTAATTTCTTATTGGCTACCTATCGTTGTCAAGCAAACACAACA
AGATTGGAGTTGAAAATCAGGTAGGATGTGTTATTGTTGTACCTTAAGTG
GATTAATTTTGGCGTGTATTAATTTTCACATGACCGAATCAAGGGTCTTC
AAAATTTTCGCGGGGATTTAATTCGCGAAAATTAATCCACTTTAGGTAAG
TTATGACAGTTTTAATTACAATACTTAACGTAACACGTAACTTCTTCATT
GTGATGAAGGCAAAGGTAAAATACTTTATAAGGGTTTCCTTCTTGTGGTA
TACCAATGCAAGCAAATTGTTGCAAGATCTGATGGTCTTGTTTGATTCAC
CTTCTGTAAGCAGTCTTATAATTACAGAAAGGTATACTTTTTATATAAAC
AAAAGGATCTTTCAACCATTAGTATTGTAGATACATGGTTTTGAGGGGGG
TGTTAGGAATAAAAGCCTCAATGGTCATTGAAAATGTTTTAAAATGTTTG
AAATGTTTTCATCAATGAAACGAGGGGTAATANCTCCGTCGCAGAAAAAC
ACGCATACATAAACTCGGTAATGCTTAAAAAAATCTTTTTGGAACAGGTC
TCAAGGCTTAGTATGATAGTCGCGACCTTAATTTCACTTACCAATAGACG
ATATCGGATTTAGATAAATGCAATGCATTCTGGTTTCTAGGGACTCTCCA
AGGAATTATAATAGATCAATTATAATAGATTATAATTCCTTTGAGAGTCC
CTAGAAACCAGAATGCATTGCATTTATCTAAATCCGATATCGTCTATTAA
TTCCGAAATCACCTAGCTTTTCCCTTTATTTTTAAAGTTTTTAAGTCAAC
TCTGGTAATAATTATTGGTAATGTTATTTTCAAATCTCTCAACTTTTGGA
ACAGGACAATTGAAGGGCAGCATGGACATCTACAAGCCTACATTACGCCA
CGCCTTCAGCCCAAAACATGCATTATGAAACAATATCAAATCAAACCTTT
ATCGTTACACCAGAGATCTCATGTTTTTGACCAAGACAGACCTCACAATG
AATTGAAGCTAAGTGGACAATTCAGTCAAGCTGAAATACATTCCTGGGTT
TATCACGCCCTACCGGAAGTCCCTGAAAGAGTTCCAATGGAAAATGAGGT
AGAACTGATATTCTGATTTAAATATCGTTGGAAATATTTGTATTTTTGTT
GATAGAGGGGACTATAAATCGAAATTAGATTTTTTGTGTGGAATTCACTC
ATGAAAAATAATCGTTAAAAAATTATAGTTTTTTTTCGTTTTTTCTGGAT
TAAGAAAAATTGATTATCGATAATATTCATTAGAACCTCCATAACTCGAA
CCCACACGGGGAAAATTCGAGTTGTGGGATAACGTTTATAAGGCATTGTT
AACTGAAGGGACGATAAAACTTGTTTGAGTTAAAAAAAAACTCTACTATC
TTCTCATAGTATTATTTATTACAATTAATTTTTCTTTTGCTCTTTTTTTC
AGATTTCCTTTTACTTTGTTTCAACGTTTTTGGACACTCAACTTGAATGC
CGGTACAGGTACGATGACGTCATAGATAAGTGCCCCTATTCGACCTACAC
GCCATTTGATAGTTCCTCCTTCACAATCAGATTCCTTAGAACCAAATCTT
ATCTTATCATTTCATTTCTCTGATGTAATCTTGCAAGCCTTGTAACAACT
CAATAGATAACCAGGGGGGGTACCAAGTTGTGGTACTGGACCAGTGCTGA
AAAGTTATACTTTCTTGTTTTTTGAAATTTATCTGAAACCACCACCACTT
AGTACCCTGGTACTAAGTTAAATTTACCCCTTAAAATAGGTATACCACCT
CTTTGTACAAGGTACAATCTTGATATCACCATTGAGAAATTACACACCAC
CGTTAAGTAGCCTGTACTAAGTTGATTTTCCCCCTCAAAATAGGTATACC
ACCCTTTAATTCTTAGTAATGGTACTTTCCGGTACACCTCCTTTAAATTT
TCTAAAAAACTTTACAACACTATTAAAAAACATACCACACCACTCTGTAC
CACCCTTAATATCTCAGGAAAAATTCCTGTCAATTTAGGTCAAGTCAAAT
ATCATTTTCAAGCCAATTTTTTTTAAATCAAAAGAAATAAATGTTTTATC
ATTTCACATATTTTTTCACTCTCTTAAAAAACAGCAAAGGCCAAGCAACA
TTTCGTTCTGACAACATTTCCACCATTTCCATCTTGAAAGACGTATTATC
AAAGGAAGCTACGAAACGAAAAATGAATCTAAACATATCTTGTGATCTCA
ACGAAGACTCCATTCCTAATGTTTTATACAGAATCCACCCAAAGCTTGAA
TATCAACTTCTCTTAGCAAAGAGGGTCCAACTAATTGATGGTCTAAAGGA
GCTGGAAACCTATGAGGGCAATGTGGATTTCTTGACAGAGGAATACCGTG
AAATTTTGGAAAATGCTGATATTCTACAAGCAGAATTCAAGAAGCAGCCT
TGTCATTTGGAACGTCTCTACGGAATGATTACAGATTTGTATATTGACCG
ACATAAATTCAAAGGCCAGAATGTGAAAAATAAAGTCTCACAGTTAATTT
CCATTTTGGATAACTATGACTTGGATTCGCTCTTAGAGTTTTTTCAAGAA
TCTTGATATAGTTTAAAAAGTGAAAATGAGGTACTACTGATATCCTAGAT
GAAAATATTTGTTGCAAACTTTTAGAGCATTTGTCGATACAGAGGATTTC
AAATTGCTGTTTGTTTTTTGTTTTTTTTTGCATGGAAATAAACCTCTAGG
GACAAATAATGATTGATTTTCTATGGTGAGCCTCTTCTGGGTTACCAGTA
ATCAAAGATCAACACCTTTGATTTTTAAGGCACGTATCAAATGGGTGTTT
TTTTAAAGGATGGAACCAAAATATGAAATTGCGACGAGTTTTAAAGGCGT
GATTGATCTACTGATGTGAATTAAGTTTTGTTTTTATTTCGGGTTTTTAT
TCAGACTTAGATGCAAGTTTTCAATAGAGAAAATAGATTTTAATTGCTAA
ACAAAGTCTCTTGCAAAATTTTGAATTTTAGAAAATTTGTCAAGCGAAAA
TGAAAACAAGATATTTGATTTGTTGCCATTAATAAAACATATTTTTTCCA
ATGTATCTCGTAGTGTCTCTAGCTAGCCAGGTATTGTGGAGCAGTGGAAA
CTTTTCACAAAATTTAATGTGAAAATGCTACGTTTCTAACATCATTATGT
TAAAATCAGATAATTCAATAATATATTACGATTTGAAATTTTTAGCACTT
GTACATAAAAAACGATATATTATAAATTATTCTAGCCATAGGGGTGTGTA
ACATGCACATATTAAACGTGTGGTTTTTAAAAGCAGGTCTGAAACTTGTA
TATAATATTGTAAAAAATTTGTCACAAAAAACTGTATGATAACAGACTAG
TATTCATAGTATTAAAGCCTTCCAAGAATTTTCAAAATTTTCCACCCAAT
ACGTCATTTTTTCTATTGTTTAAGTGACTTATTGGGTGGAAAATTTTAAA
AGTTCTCAGAAG Coding sequence (CDS) from alignment at sc0000597:188332..194143- >TCONS_00026974 ID=TCONS_00026974|Name=TCONS_00026974|organism=Clytia hemisphaerica|type=CDS|length=8676bp|location=Sequence derived from alignment at sc0000597:188332..194143- (Clytia hemisphaerica) CAAAGGCCAAGCAACATTTCGTTCTGACAACATTTCCACCATTTCCATCT TGAAAGACGTATTATCAAAGGAAGCTACGAAACGAAAAATGAATCTAAAC ATATCTTGTGATCTCAACGAAGACTCCATTCCTAATGTTTTATACAGAAT CCACCCAAAGCTTGAATATCAACTTCTCTTAGCAAAGAGGGTCCAACTAA TTGATGGTCTAAAGGAGCTGGAAACCTATGAGGGCAATGTGGATTTCTTG ACAGAGGAATACCGTGAAATTTTGGAAAATGCTGATATTCTACAAGCAGA ATTCAAGAAGCAGCCTTGTCATTTGGAACGTCTCTACGGAATGATTACAG ATTTGTATATTGACCGACATAAATTCAAAGGCCAGAATGTGAAAAATAAA GTCTCACAGTTAATTTCCATTTTGGATAACTATGACTTGGATTCGCTCTT AGAGTTTTTTCAAGAATCTTGAATTTCCTTTTACTTTGTTTCAACGTTTT TGGACACTCAACTTGAATGCCGGTACAGGACAATTGAAGGGCAGCATGGA CATCTACAAGCCTACATTACGCCACGCCTTCAGCCCAAAACATGCATTAT GAAACAATATCAAATCAAACCTTTATCGTTACACCAGAGATCTCATGTTT TTGACCAAGACAGACCTCACAATGAATTGAAGCTAAGTGGACAATTCAGT CAAGCTGAAATACATTCCTGGGTTTATCACGCCCTACCGGAAGTCCCTGA AAGAGTTCCAATGGAAAATGAGATGTTGGCTTTGAATTTGAGCCGTGTAG ACTATCTTCAGGTGGGAGTAACGTCCAATAAATGTATGAGTGTTATTCCC ACAGCAGGTGGATCTTCATCCAAACCTACCACTCAGCGTATTGTAGTTGG TGATTATGAAGGGGTTGTTACTTGTTTCAACATCAAGAAACATGTACCAA ACATCTCATTCAAAACTTTACCGCTAAACAACAAAATATTACGGTTATGC ATGGGAGCAAGAGCTGGACCGCTTATGGAGAAAGTTTATGTATGTTCTGG AAATGAAGTTTATGGTTTCAATAAAAAGGGAAAAGGTTTTTTGAAATTTG ATAGTAATTTGACTGAATCAATTCAAACAATGTATGCTGATAACTTGGAT TTGTATCTTTGTGGAAAATATATTTGCAATCATTATCATGATTGCATTGA TTCAAACTACTATCTTTCACCAGATCTAATCAATGATATTGTAGTTTTGC CAGAATCTGGTGGTCACAAACCAATGCCTATCTTAGCATGCCAAGACCGT GTTTTGAGAGCTTTGAATGGATCTGACCTGTACTATGAAGTAGAAATTCC TGGATCGCCTTCAGTAGCTGTTCTTGGAAGTCAAGCAGAGAACGGTGCTG ATAGTGTTGTATATGGTACCGCCGATGGCAAAATTGGTTTAGTGCAGTTG AATGCCAGTGCTCCAGAGCATGTCTGGGAGATCGGTAATGAGAAGCAATC TGGTGATGTTTTGTCTTTGGATCTCTATGACGTGTCCAGTAATGGCACCA AAGATTTATTAGTTGGGCGTGCAGATGGTGTGATTGAAGTGTATGGTTTT GACGAGGGAAGTAATCCATTTCAACATTACAAATATACACTTTCAGAAAG CATAACTGCAGTTTCTGGCGGCTCTGTCTGTGCTCCTGGGTATCAAGAGG TAGCCGTTTCTACCTATACTGGATGGATTCTTGGTCTAACTTCAGAACCA CAGCAAAGACAGACTGGTATGCAAGGTAGTAACACAAATGACCCTGTGAC AGCCGAAATCAAACAGAAGATCACAGACCTCAATGCTGAAATTGAGGAAC TTCAAGGCCTTGTGCTTAAAGAACGCGATAAGTATCAACAAACTGCTAAT TCTAAAACAGCCGTGTCTGCAGTACCCATGTTTGAAATTAATGATCGATT CCAGTTGAATCACGGGGATGCCAGCTATACATTGAGCATTGAAGTTTTAA TGCCCATTGATATCATATTACTTCAAAGCGATGTACCAGTAGATCTGTTG GATGTTGAGAAGAATTCAGCGGTTGTTTCTTACAGTAGTTGTGATCCGGA GAGTGGTAATTTCTTATTGGCTACCTATCGTTGTCAAGCAAACACAACAA GATTGGAGTTGAAAATCAGCAAAGGCCAAGCAACATTTCGTTCTGACAAC ATTTCCACCATTTCCATCTTGAAAGACGTATTATCAAAGGAAGCTACGAA ACGAAAAATGAATCTAAACATATCTTGTGATCTCAACGAAGACTCCATTC CTAATGTTTTATACAGAATCCACCCAAAGCTTGAATATCAACTTCTCTTA GCAAAGAGGGTCCAACTAATTGATGGTCTAAAGGAGCTGGAAACCTATGA GGGCAATGTGGATTTCTTGACAGAGGAATACCGTGAAATTTTGGAAAATG CTGATATTCTACAAGCAGAATTCAAGAAGCAGCCTTGTCATTTGGAACGT CTCTACGGAATGATTACAGATTTGTATATTGACCGACATAAATTCAAAGG CCAGAATGTGAAAAATAAAGTCTCACAGTTAATTTCCATTTTGGATAACT ATGACTTGGATTCGCTCTTAGAGTTTTTTCAAGAATCTTGAATTTCCTTT TACTTTGTTTCAACGTTTTTGGACACTCAACTTGAATGCCGGTACAGGAC AATTGAAGGGCAGCATGGACATCTACAAGCCTACATTACGCCACGCCTTC AGCCCAAAACATGCATTATGAAACAATATCAAATCAAACCTTTATCGTTA CACCAGAGATCTCATGTTTTTGACCAAGACAGACCTCACAATGAATTGAA GCTAAGTGGACAATTCAGTCAAGCTGAAATACATTCCTGGGTTTATCACG CCCTACCGGAAGTCCCTGAAAGAGTTCCAATGGAAAATGAGATGTTGGCT TTGAATTTGAGCCGTGTAGACTATCTTCAGGTGGGAGTAACGTCCAATAA ATGTATGAGTGTTATTCCCACAGCAGGTGGATCTTCATCCAAACCTACCA CTCAGCGTATTGTAGTTGGTGATTATGAAGGGGTTGTTACTTGTTTCAAC ATCAAGAAACATGTACCAAACATCTCATTCAAAACTTTACCGCTAAACAA CAAAATATTACGGTTATGCATGGGAGCAAGAGCTGGACCGCTTATGGAGA AAGTTTATGTATGTTCTGGAAATGAAGTTTATGGTTTCAATAAAAAGGGA AAAGGTTTTTTGAAATTTGATAGTAATTTGACTGAATCAATTCAAACAAT GTATGCTGATAACTTGGATTTGTATCTTTGTGGAAAATATATTTGCAATC ATTATCATGATTGCATTGATTCAAACTACTATCTTTCACCAGATCTAATC AATGATATTGTAGTTTTGCCAGAATCTGGTGGTCACAAACCAATGCCTAT CTTAGCATGCCAAGACCGTGTTTTGAGAGCTTTGAATGGATCTGACCTGT ACTATGAAGTAGAAATTCCTGGATCGCCTTCAGTAGCTGTTCTTGGAAGT CAAGCAGAGAACGGTGCTGATAGTGTTGTATATGGTACCGCCGATGGCAA AATTGGTTTAGTGCAGTTGAATGCCAGTGCTCCAGAGCATGTCTGGGAGA TCGGTAATGAGAAGCAATCTGGTGATGTTTTGTCTTTGGATCTCTATGAC GTGTCCAGTAATGGCACCAAAGATTTATTAGTTGGGCGTGCAGATGGTGT GATTGAAGTGTATGGTTTTGACGAGGGAAGTAATCCATTTCAACATTACA AATATACACTTTCAGAAAGCATAACTGCAGTTTCTGGCGGCTCTGTCTGT GCTCCTGGGTATCAAGAGGTAGCCGTTTCTACCTATACTGGATGGATTCT TGGTCTAACTTCAGAACCACAGCAAAGACAGACTGGTATGCAAGGTAGTA ACACAAATGACCCTGTGACAGCCGAAATCAAACAGAAGATCACAGACCTC AATGCTGAAATTGAGGAACTTCAAGGCCTTGTGCTTAAAGAACGCGATAA GTATCAACAAACTGCTAATTCTAAAACAGCCGTGTCTGCAGTACCCATGT TTGAAATTAATGATCGATTCCAGTTGAATCACGGGGATGCCAGCTATACA TTGAGCATTGAAGTTTTAATGCCCATTGATATCATATTACTTCAAAGCGA TGTACCAGTAGATCTGTTGGATGTTGAGAAGAATTCAGCGGTTGTTTCTT ACAGTAGTTGTGATCCGGAGAGTGGTAATTTCTTATTGGCTACCTATCGT TGTCAAGCAAACACAACAAGATTGGAGTTGAAAATCAGCAAAGGCCAAGC AACATTTCGTTCTGACAACATTTCCACCATTTCCATCTTGAAAGACGTAT TATCAAAGGAAGCTACGAAACGAAAAATGAATCTAAACATATCTTGTGAT CTCAACGAAGACTCCATTCCTAATGTTTTATACAGAATCCACCCAAAGCT TGAATATCAACTTCTCTTAGCAAAGAGGGTCCAACTAATTGATGGTCTAA AGGAGCTGGAAACCTATGAGGGCAATGTGGATTTCTTGACAGAGGAATAC CGTGAAATTTTGGAAAATGCTGATATTCTACAAGCAGAATTCAAGAAGCA GCCTTGTCATTTGGAACGTCTCTACGGAATGATTACAGATTTGTATATTG ACCGACATAAATTCAAAGGCCAGAATGTGAAAAATAAAGTCTCACAGTTA ATTTCCATTTTGGATAACTATGACTTGGATTCGCTCTTAGAGTTTTTTCA AGAATCTTGAATTTCCTTTTACTTTGTTTCAACGTTTTTGGACACTCAAC TTGAATGCCGGTACAGGACAATTGAAGGGCAGCATGGACATCTACAAGCC TACATTACGCCACGCCTTCAGCCCAAAACATGCATTATGAAACAATATCA AATCAAACCTTTATCGTTACACCAGAGATCTCATGTTTTTGACCAAGACA GACCTCACAATGAATTGAAGCTAAGTGGACAATTCAGTCAAGCTGAAATA CATTCCTGGGTTTATCACGCCCTACCGGAAGTCCCTGAAAGAGTTCCAAT GGAAAATGAGATGTTGGCTTTGAATTTGAGCCGTGTAGACTATCTTCAGG TGGGAGTAACGTCCAATAAATGTATGAGTGTTATTCCCACAGCAGGTGGA TCTTCATCCAAACCTACCACTCAGCGTATTGTAGTTGGTGATTATGAAGG GGTTGTTACTTGTTTCAACATCAAGAAACATGTACCAAACATCTCATTCA AAACTTTACCGCTAAACAACAAAATATTACGGTTATGCATGGGAGCAAGA GCTGGACCGCTTATGGAGAAAGTTTATGTATGTTCTGGAAATGAAGTTTA TGGTTTCAATAAAAAGGGAAAAGGTTTTTTGAAATTTGATAGTAATTTGA CTGAATCAATTCAAACAATGTATGCTGATAACTTGGATTTGTATCTTTGT GGAAAATATATTTGCAATCATTATCATGATTGCATTGATTCAAACTACTA TCTTTCACCAGATCTAATCAATGATATTGTAGTTTTGCCAGAATCTGGTG GTCACAAACCAATGCCTATCTTAGCATGCCAAGACCGTGTTTTGAGAGCT TTGAATGGATCTGACCTGTACTATGAAGTAGAAATTCCTGGATCGCCTTC AGTAGCTGTTCTTGGAAGTCAAGCAGAGAACGGTGCTGATAGTGTTGTAT ATGGTACCGCCGATGGCAAAATTGGTTTAGTGCAGTTGAATGCCAGTGCT CCAGAGCATGTCTGGGAGATCGGTAATGAGAAGCAATCTGGTGATGTTTT GTCTTTGGATCTCTATGACGTGTCCAGTAATGGCACCAAAGATTTATTAG TTGGGCGTGCAGATGGTGTGATTGAAGTGTATGGTTTTGACGAGGGAAGT AATCCATTTCAACATTACAAATATACACTTTCAGAAAGCATAACTGCAGT TTCTGGCGGCTCTGTCTGTGCTCCTGGGTATCAAGAGGTAGCCGTTTCTA CCTATACTGGATGGATTCTTGGTCTAACTTCAGAACCACAGCAAAGACAG ACTGGTATGCAAGGTAGTAACACAAATGACCCTGTGACAGCCGAAATCAA ACAGAAGATCACAGACCTCAATGCTGAAATTGAGGAACTTCAAGGCCTTG TGCTTAAAGAACGCGATAAGTATCAACAAACTGCTAATTCTAAAACAGCC GTGTCTGCAGTACCCATGTTTGAAATTAATGATCGATTCCAGTTGAATCA CGGGGATGCCAGCTATACATTGAGCATTGAAGTTTTAATGCCCATTGATA TCATATTACTTCAAAGCGATGTACCAGTAGATCTGTTGGATGTTGAGAAG AATTCAGCGGTTGTTTCTTACAGTAGTTGTGATCCGGAGAGTGGTAATTT CTTATTGGCTACCTATCGTTGTCAAGCAAACACAACAAGATTGGAGTTGA AAATCAGCAAAGGCCAAGCAACATTTCGTTCTGACAACATTTCCACCATT TCCATCTTGAAAGACGTATTATCAAAGGAAGCTACGAAACGAAAAATGAA TCTAAACATATCTTGTGATCTCAACGAAGACTCCATTCCTAATGTTTTAT ACAGAATCCACCCAAAGCTTGAATATCAACTTCTCTTAGCAAAGAGGGTC CAACTAATTGATGGTCTAAAGGAGCTGGAAACCTATGAGGGCAATGTGGA TTTCTTGACAGAGGAATACCGTGAAATTTTGGAAAATGCTGATATTCTAC AAGCAGAATTCAAGAAGCAGCCTTGTCATTTGGAACGTCTCTACGGAATG ATTACAGATTTGTATATTGACCGACATAAATTCAAAGGCCAGAATGTGAA AAATAAAGTCTCACAGTTAATTTCCATTTTGGATAACTATGACTTGGATT CGCTCTTAGAGTTTTTTCAAGAATCTTGAATTTCCTTTTACTTTGTTTCA ACGTTTTTGGACACTCAACTTGAATGCCGGTACAGGACAATTGAAGGGCA GCATGGACATCTACAAGCCTACATTACGCCACGCCTTCAGCCCAAAACAT GCATTATGAAACAATATCAAATCAAACCTTTATCGTTACACCAGAGATCT CATGTTTTTGACCAAGACAGACCTCACAATGAATTGAAGCTAAGTGGACA ATTCAGTCAAGCTGAAATACATTCCTGGGTTTATCACGCCCTACCGGAAG TCCCTGAAAGAGTTCCAATGGAAAATGAGATGTTGGCTTTGAATTTGAGC CGTGTAGACTATCTTCAGGTGGGAGTAACGTCCAATAAATGTATGAGTGT TATTCCCACAGCAGGTGGATCTTCATCCAAACCTACCACTCAGCGTATTG TAGTTGGTGATTATGAAGGGGTTGTTACTTGTTTCAACATCAAGAAACAT GTACCAAACATCTCATTCAAAACTTTACCGCTAAACAACAAAATATTACG GTTATGCATGGGAGCAAGAGCTGGACCGCTTATGGAGAAAGTTTATGTAT GTTCTGGAAATGAAGTTTATGGTTTCAATAAAAAGGGAAAAGGTTTTTTG AAATTTGATAGTAATTTGACTGAATCAATTCAAACAATGTATGCTGATAA CTTGGATTTGTATCTTTGTGGAAAATATATTTGCAATCATTATCATGATT GCATTGATTCAAACTACTATCTTTCACCAGATCTAATCAATGATATTGTA GTTTTGCCAGAATCTGGTGGTCACAAACCAATGCCTATCTTAGCATGCCA AGACCGTGTTTTGAGAGCTTTGAATGGATCTGACCTGTACTATGAAGTAG AAATTCCTGGATCGCCTTCAGTAGCTGTTCTTGGAAGTCAAGCAGAGAAC GGTGCTGATAGTGTTGTATATGGTACCGCCGATGGCAAAATTGGTTTAGT GCAGTTGAATGCCAGTGCTCCAGAGCATGTCTGGGAGATCGGTAATGAGA AGCAATCTGGTGATGTTTTGTCTTTGGATCTCTATGACGTGTCCAGTAAT GGCACCAAAGATTTATTAGTTGGGCGTGCAGATGGTGTGATTGAAGTGTA TGGTTTTGACGAGGGAAGTAATCCATTTCAACATTACAAATATACACTTT CAGAAAGCATAACTGCAGTTTCTGGCGGCTCTGTCTGTGCTCCTGGGTAT CAAGAGGTAGCCGTTTCTACCTATACTGGATGGATTCTTGGTCTAACTTC AGAACCACAGCAAAGACAGACTGGTATGCAAGGTAGTAACACAAATGACC CTGTGACAGCCGAAATCAAACAGAAGATCACAGACCTCAATGCTGAAATT GAGGAACTTCAAGGCCTTGTGCTTAAAGAACGCGATAAGTATCAACAAAC TGCTAATTCTAAAACAGCCGTGTCTGCAGTACCCATGTTTGAAATTAATG ATCGATTCCAGTTGAATCACGGGGATGCCAGCTATACATTGAGCATTGAA GTTTTAATGCCCATTGATATCATATTACTTCAAAGCGATGTACCAGTAGA TCTGTTGGATGTTGAGAAGAATTCAGCGGTTGTTTCTTACAGTAGTTGTG ATCCGGAGAGTGGTAATTTCTTATTGGCTACCTATCGTTGTCAAGCAAAC ACAACAAGATTGGAGTTGAAAATCAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
| TCONS_00026974-exon-sc0000597-1575043694:193710..194143 | TCONS_00026974-exon-sc0000597-1575043694:193710..194143 | Clytia hemisphaerica | exon |
| TCONS_00026974-exon-sc0000597-1575043694:191824..193269 | TCONS_00026974-exon-sc0000597-1575043694:191824..193269 | Clytia hemisphaerica | exon |
| TCONS_00026974-exon-sc0000597-1575043694:190746..190989 | TCONS_00026974-exon-sc0000597-1575043694:190746..190989 | Clytia hemisphaerica | exon |
| TCONS_00026974-exon-sc0000597-1575043694:190336..190391 | TCONS_00026974-exon-sc0000597-1575043694:190336..190391 | Clytia hemisphaerica | exon |
| TCONS_00026974-exon-sc0000597-1575043694:188332..189709 | TCONS_00026974-exon-sc0000597-1575043694:188332..189709 | Clytia hemisphaerica | exon |
| TCONS_00026974-exon-sc0000597-1510915933:193710..194143 | TCONS_00026974-exon-sc0000597-1510915933:193710..194143 | Clytia hemisphaerica | exon |
| TCONS_00026974-exon-sc0000597-1510915933:191824..193269 | TCONS_00026974-exon-sc0000597-1510915933:191824..193269 | Clytia hemisphaerica | exon |
| TCONS_00026974-exon-sc0000597-1510915933:190746..190989 | TCONS_00026974-exon-sc0000597-1510915933:190746..190989 | Clytia hemisphaerica | exon |
| TCONS_00026974-exon-sc0000597-1510915933:190336..190391 | TCONS_00026974-exon-sc0000597-1510915933:190336..190391 | Clytia hemisphaerica | exon |
| TCONS_00026974-exon-sc0000597-1510915933:188332..189709 | TCONS_00026974-exon-sc0000597-1510915933:188332..189709 | Clytia hemisphaerica | exon |
| TCONS_00026974-exon-sc0000597-1491911889:193710..194143 | TCONS_00026974-exon-sc0000597-1491911889:193710..194143 | Clytia hemisphaerica | exon |
| TCONS_00026974-exon-sc0000597-1491911889:191824..193269 | TCONS_00026974-exon-sc0000597-1491911889:191824..193269 | Clytia hemisphaerica | exon |
| TCONS_00026974-exon-sc0000597-1491911889:190746..190989 | TCONS_00026974-exon-sc0000597-1491911889:190746..190989 | Clytia hemisphaerica | exon |
| TCONS_00026974-exon-sc0000597-1491911889:190336..190391 | TCONS_00026974-exon-sc0000597-1491911889:190336..190391 | Clytia hemisphaerica | exon |
| TCONS_00026974-exon-sc0000597-1491911889:188332..189709 | TCONS_00026974-exon-sc0000597-1491911889:188332..189709 | Clytia hemisphaerica | exon |
The following polypeptide feature(s) derives from this transcript:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
| sc0000597 | supercontig | sc0000597:188332..194143 - |
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
| Term | Definition |
| IPR015943 | WD40/YVTN_repeat-like_dom |
| IPR017986 | WD40_repeat_dom |
Vocabulary: Molecular Function
| Term | Definition |
| GO:0005515 | protein binding |
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
| Category |
Term Accession |
Term Name |
| molecular_function |
GO:0005515 |
protein binding |
Blast
BLAST of TCONS_00026974 vs. Swiss-Prot (Human)
Match: BBS7 (Bardet-Biedl syndrome 7 protein OS=Homo sapiens GN=BBS7 PE=1 SV=2) HSP 1 Score: 794.267 bits (2050), Expect = 0.000e+0 Identity = 413/721 (57.28%), Postives = 525/721 (72.82%), Query Frame = 1
Query: 487 LALNLSRVDYLQVGVTSNKCMSVIPTAGGSSSKPTTQRIVVGDYEGVVTCFNIKKHVPNISFKTLPLNNKILRLCMGARAGPLMEKVYVCSGNEVYXXXXXXXXXXXXDSNLTESIQTMYADNLDLYLCGKYICNHYHDCIDSNYYLSPDLINDIVVLPESGGHKPMPILACQDRVLRALNGSDLYYEVEIPGSPSVAVL--GSQAENGADSVVYGTADGKIGLVQLNASAPEHVWEIGNEKQSGDVLSLDLYDVSSNGTKDLLVGRADGVIEVYGFDEGSNPFQHYKYTLSESITAVSGGSVCAPGYQEVAVSTYTGWILGLTSEPQQRQTGMQGSNTNDPVTAEIKQKITDLNAEIEELQGLVLKERDKYQQTANSKTAVSAVPMFEINDRFQLNHGDASYTLSIEVLMPIDIILLQSDVPVDLLDVEKNSAVVSYSSCDPESG-NFLLATYRCQANTTRLELKIRTIEGQHGHLQAYITPRLQPKTCIMKQYQIKPLSLHQRSHVFDQDRPHNELKLSGQFSQAEIHSWVYHALPEVPERVPMENEISFYFVSTFLDTQLECRYSKGQATFRSDNISTISILKDVLSKEATKRKMNLNISCDLNEDSIPNVLYRIHPKLEYQLLLAKRVQLIDGLKELETYEGNVDFLTEEYREILENADILQAEFKKQPCHLERLYGMITDLYIDRHKFKGQNVKNKVSQLISILDNYDLDSLLEFF 2640
+ L L+R+DYLQVGVTS K M +IP +S TQ++V+GD++GVV CF +KK FKTLP KI RL +G EK+++ + +E+ GF K+GK FL F++NLTESI+ M+ DL+L YI NHY DC D +YYLS D IND++ LP + P+LACQDRVLR L GSD+ Y VE+PG P+V L G+ ++G D +++GT+DGK+ L+Q+ S P WEI NEK+ G +L +D +D+ +G KDLLVGR DG++EVY FD + P + LSES+T++ GG V Y E+ VSTY+GW+ GLT+EP +++G + E++ KI+ L E+E LQ VL+ER+ YQQ++ S A SAVP F IND+F LN DASY+L +EV ID +L+QSDVP+DLLDV+KNSAVVS+SSCD ES NFLLATYRCQA+TTRLELKIR+IEGQ+G LQAY+TPR+QPKTC ++QY IKPLSLHQR+H D DRP N L L+GQFS AE+HSWV LPEVPE+ P ++FYF +TFLDTQLE Y KG+ F+SDNISTISILKDVLSKEATKRK+NLNIS ++NE S+ + L IHPKLEYQLLLAK+VQLID LKEL+ +EGN +FL EY ILE AD LQ E+KKQP HLERLYGMITDL+ID+ KFKG NVK KV L+ ILD+YD ++L+ FF
Sbjct: 1 MDLILNRMDYLQVGVTSQKTMKLIP----ASRHRATQKVVIGDHDGVVMCFGMKKGEAAAVFKTLP-GPKIARLELGGVINTPQEKIFIAAASEIRGFTKRGKQFLSFETNLTESIKAMHISGSDLFLSASYIYNHYCDCKDQHYYLSGDKINDVICLPVERLSRITPVLACQDRVLRVLQGSDVMYAVEVPGPPTVLALHNGNGGDSGED-LLFGTSDGKLALIQITTSKPVRKWEIQNEKKRGGILCIDSFDIVGDGVKDLLVGRDDGMVEVYSFDNANEPVLRFDQMLSESVTSIQGGCVGKDSYDEIVVSTYSGWVTGLTTEPIHKESG---PGEELKINQEMQNKISSLRNELEHLQYKVLQERENYQQSSQSSKAKSAVPSFGINDKFTLNKDDASYSLILEVQTAIDNVLIQSDVPIDLLDVDKNSAVVSFSSCDSESNDNFLLATYRCQADTTRLELKIRSIEGQYGTLQAYVTPRIQPKTCQVRQYHIKPLSLHQRTHFIDHDRPMNTLTLTGQFSFAEVHSWVVFCLPEVPEKPPAGECVTFYFQNTFLDTQLESTYRKGEGVFKSDNISTISILKDVLSKEATKRKINLNISYEINEVSVKHTLKLIHPKLEYQLLLAKKVQLIDALKELQIHEGNTNFLIPEYHCILEEADHLQEEYKKQPAHLERLYGMITDLFIDKFKFKGTNVKTKVPLLLEILDSYDQNALISFF 712
The following BLAST results are available for this feature:
|