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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00026956 ID=TCONS_00026956|Name=TCONS_00026956|organism=Clytia hemisphaerica|type=transcript|length=400bp
aataattctttttgtttttatccttACGAAGGTATCTAATAGTTTTCACA
ACTGTACtaaatattcattttttcttctttacagAAAAGATATCAAAGAA
TAAAGCAATAAAACTATATACTAAAAGTGATTAATATTACTCGAAATGGA
TTGACATTACACTGACTGAATAACATGATTATCTGTGCTTGCTCAGgtTT
ATCAGGTGGCAAACATGCTTTCAGATTATTTCAAAGGTTACGTCATAATA
CAAAACCATTAGCTCATCAACCAATATGGCTTCAAAAAAGTGTAAGTTTC
ATTGTGTTCATTCCATTTGTGACAAAAACCTTTTAAACAAGTTGATTTAT
AAGAGGTTAATCAAGGTCGAGAAGCTCCCATCTTATTGTATTCCTTCAAT Run BLAST on NCBI transcript from alignment at sc0000597:130612..132038+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00026956 ID=TCONS_00026956|Name=TCONS_00026956|organism=Clytia hemisphaerica|type=transcript|length=1427bp|location=Sequence derived from alignment at sc0000597:130612..132038+ (Clytia hemisphaerica)
aataattctttttgtttttatccttACGAAGGTATCTAATAGTTTTCACA
ACTGTACtaaatattcattttttcttctttacagAAAAGATATCAAAGAA
TAAAGCAATAAAACTATATACTAAAAGTGATTAATATTACTCGAAATGGA
TTGACATTACACTGACTGAATAACATGATTATCTGTGCTTGCTCAGGTTT
GTTGTCCATTAATTATTCATACACCTTTTttcatataagaacataaaacc
TTGAGGCCCAAACCTAAACATTCTGAGCAgttctaagaacattttgaggc
ttttgcAGAGTCTTGCAATTTTTAAAGAAGTTAGattaaaatactgaaaa
taagaacatcctaaCCTTTCAAGCACCTTGGGGGAAGGGCAAAGTGCCTT
CCCCCTCCCcttccaaaaaaattaatcttatttgataacttttgaaatat
ttatccaattgACTTAAAATTTTGCAACTGTCCACCAAATAATAGGACAA
TCCCTcactttttttcactttaattatttttgctcaaattttgtgagGCT
GCAACTCCATGTGACATGTTTTTGCCACCTGTTAGTATCGTGTTTTTTTT
ACAGACCTGCCCAAAATTGTCCTTTTTTGCCTAAACAGCCCTAGGATACT
GTATCTAGTGATTGGAAAATtgtattgacttgaaatttggacaaGTGTTA
GGTATTGACAATACCACCTTGCAGCCAAAATTTCGGCAAAATCGGACGAG
TGGTTATGCTgagcattttaggtaaaaaGCGGACTGGGTTGTAAAATGTC
AACCCCTCAAGTACACTGTCTTATGGTCAATGTCTATCACCGTTGAACAT
TTCAAGTCAAAATCTCCAGTAGTTCCTGAGTTTTGGTAGGTGGTCAACGT
GTATTTTGCATACCGGTctgcaaagtaccaaatactcATGAGAACGAATT
TTTGCTGTTACtagtctcttttatttgacaaatcagcCTTCAGGAACAAA
TTACAGTGAATTCGAATgagtcaatcagtcaatacatgtTTTTGGTCAAG
TTTACATCCTGGTCTGTAATCCATCCCACCTTACCTAGCCGGGCCAGCTC
GCCTCCATATAAACAGTTCCATTTTTGAATGGAGATGCTAGAAAAATTAG
GAGATGAGAATTCTgagtttatatatttgcaaatCCAAAAGAAATATCGA
CGGacattattttcttattttaggtTTATCAGGTGGCAAACATGCTTTCA
GATTATTTCAAAGGTTACGTCATAATACAAAACCATTAGCTCATCAACCA
ATATGGCTTCAAAAAAGTGTAAGTTTCATTGTGTTCATTCCATTTGTGAC
AAAAACCTTTTAAACAAGTTGATTTATAAGAGGTTAATCAAGGTCGAGAA
GCTCCCATCTTATTGTATTCCTTCAAT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00026956-exon-sc0000597-1491911889:130612..130807 | TCONS_00026956-exon-sc0000597-1491911889:130612..130807 | Clytia hemisphaerica | exon |
| TCONS_00026956-exon-sc0000597-1510915933:130612..130807 | TCONS_00026956-exon-sc0000597-1510915933:130612..130807 | Clytia hemisphaerica | exon |
| TCONS_00026956-exon-sc0000597-1575043694:130612..130807 | TCONS_00026956-exon-sc0000597-1575043694:130612..130807 | Clytia hemisphaerica | exon |
| TCONS_00026956-exon-sc0000597-1491911889:131835..132038 | TCONS_00026956-exon-sc0000597-1491911889:131835..132038 | Clytia hemisphaerica | exon |
| TCONS_00026956-exon-sc0000597-1510915933:131835..132038 | TCONS_00026956-exon-sc0000597-1510915933:131835..132038 | Clytia hemisphaerica | exon |
| TCONS_00026956-exon-sc0000597-1575043694:131835..132038 | TCONS_00026956-exon-sc0000597-1575043694:131835..132038 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000597 | supercontig | sc0000597:130612..132038 + |
Blast
The following BLAST results are available for this feature:
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