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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00026902 ID=TCONS_00026902|Name=TCONS_00026902|organism=Clytia hemisphaerica|type=transcript|length=952bp
GAGTGGTAGAGATttcaagaactttctttctgcCCACCAAAAGCAGATCG
GACAGCAAGATCCAAAACTCGTGCAAAGGTTCCTTGCAGGACACAAACCC
AATTACAAACCTGTCAACTATGAGAAAGTTCAGCTGCTTACACAAATTCG
AAAATCCAGTGCAAATCGTGGCTTAAAGAGAGTTGAAAAGTTGGAACAAA
ATGTCAAGAAGAGTCGCGAGGAACAAATGATCCAAGAACACAGGCGTTTA
TGGGAAATCGAAATGCGTAAATTGAAAGAATCGGAAGAGAAAGTGTTGAG
AGAGATAGAACTCCTTCATCCTTTAGCTCctaatttaaatgaaaaaacat
cagCTAAAGAAGAGTTATATGAGGAGATAACGGATTATGAAGATCACTTA
AGATATGAACTCAAACGGTTCGGTAAAGGAACAGTCGACACTGTTCTGAT
GCTCCGCGAAGACCTGCTTTCTTGGTTGAAAACGAACCGACACAAACTAG
CCATAGGACACCATGATAGTCAGCAAGAAGACGGAATTATAAAGACTATA
GAATCAGTGAAACAGCAACAAAGCCACTTGATGGAAGACCTAGCAGACCA
GAGACGGGAAATTGAAGAAGAGATATTCTCAATGGTATACGAACAAGATC
TTCAACCAACAGACCATGGCTACGAAACAGACCGACCTAGTAGTTCATGT
TCAGCTATGTCAGCTCACACAATAGCATCTACGAGTTGTTATTCGACTTT
TGGTAAATTACCAAGAATCGAACTTGGTCCGCCATTGCATCTCAATGAGT
TGTATTGCCCTGATGAACAACTTAGAGAAAATTGTCTCTTAGAATTTGAC
GTGCTTGATGAACGATATTCGATAGAGTTGGAGACTTTAGAAGAACAATA
CCATGATGTCATCTCAAACATGCCAAACAATGGGTGGTCAGATGATGATT
GT Run BLAST on NCBI transcript from alignment at sc0000596:107103..108558+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00026902 ID=TCONS_00026902|Name=TCONS_00026902|organism=Clytia hemisphaerica|type=transcript|length=1456bp|location=Sequence derived from alignment at sc0000596:107103..108558+ (Clytia hemisphaerica)
GAGTGGTAGAGATttcaagaactttctttctgcCCACCAAAAGCAGATCG
GACAGCAAGGTAAGTAAAGAAGTAGACTAAAGATATTctgttttcaacaa
aaatatagATTGAAGTTCTTTCAGCTTCTTTAAAGAGTTcgaaataaaat
caataaataaaataGTTTAGCTTTTTCTAACTTAAGTTTGTCCCTAGCAT
TAACTTATGGAAAAGTATTTTAGTTATATTAGGGAGATTATGTATAAAGT
TCACGGATCGTGGTCATAGTCTTGttcattttgttattttagATCCAAAA
CTCGTGCAAAGGTTCCTTGCAGGACACAAACCCAATTACAAACCTGTCAA
CTATGAGAAAGTTCAGCTGCTTACACAAATTCGAAAATCCAGTGCAAATC
GTGGCTTAAAGAGAGTTGAAAAGTTGGAACAAAATGTCAAGAAGAGTCGC
GAGGAACAAATGATCCAAGAACACAGGCGTTTATGGGAAATCGAAATGCG
TAAATTGAAAGAATCGGAAGAGAAAGTGTTGAGAGAGATAGAACTCCTTC
ATCCTTTAGCTCctaatttaaatgaaaaaacatcagCTAAAGAAGAGTTA
TATGAGGAGATAACGGATTATGAAGATCACTTAAGATATGAACTCAAACG
GTTCGGTAAAGGAACAGTCGACACTGTTCTGATGCTCCGCGAAGACCTGC
TTTCTTGGTTGAAAACGAACCGACACAAACTAGCCATAGGACACCATGAT
AGTCAGCAAGAAGACGGAATTATAAAGACTATAGAATCAGTGAAACAGCA
ACAAAGCCACTTGATGGAAGACCTAGCAGACCAGAGACGGGAAATTGAAG
AAGAGATATTCTCAATGGTATACGAACAAGATCTTCAACCAACAGACCAT
GGCTACGAAACAGACCGACCTAGTAGTTCATGTTCAGCTATGTCAGCTCA
CACAATAGCATCTACGAGTTGTTATTCGACTTTTGGTAAATTACCAAGAA
TCGAACTTGGTCCGCCATTGCATCTCAATGAGTTGTATTGCCCTGATGAA
CAACTTAGAGAAAATTGTCTCTTAGAATTTGACGTGCTTGATGAACGATA
TTCGATAGAGTTGGAGACTTTAGAAGAACAATACCATGATGTCATCTCAA
AGTGAGTCGGCTTGCTTTTGAATCTTTCTCTACCATAATTTATATTCCTT
GGTATTTTCCTTCTCATCCTGTCTCGTCTATGAAAAGCTAACTTGTGTAT
CACGTGAAAGGTTTTTTTGGGGATTTTAAAGTCACTGAActaattttaac
ttttgaagATTGCCTTCACTAACTTTTACCATGATTTAGATATAAGTGGG
TTTGTTAGACTCTAAGAACGTCAGCTTATGCCCTCTAGTTGtttcgtaaa
gttcgattaTGTATTTTTCTAGCATGCCAAACAATGGGTGGTCAGATGAT
GATTGT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00026902-exon-sc0000596-1491911889:107103..107161 | TCONS_00026902-exon-sc0000596-1491911889:107103..107161 | Clytia hemisphaerica | exon |
| TCONS_00026902-exon-sc0000596-1510915933:107103..107161 | TCONS_00026902-exon-sc0000596-1510915933:107103..107161 | Clytia hemisphaerica | exon |
| TCONS_00026902-exon-sc0000596-1575043694:107103..107161 | TCONS_00026902-exon-sc0000596-1575043694:107103..107161 | Clytia hemisphaerica | exon |
| TCONS_00026902-exon-sc0000596-1491911889:107395..108253 | TCONS_00026902-exon-sc0000596-1491911889:107395..108253 | Clytia hemisphaerica | exon |
| TCONS_00026902-exon-sc0000596-1510915933:107395..108253 | TCONS_00026902-exon-sc0000596-1510915933:107395..108253 | Clytia hemisphaerica | exon |
| TCONS_00026902-exon-sc0000596-1575043694:107395..108253 | TCONS_00026902-exon-sc0000596-1575043694:107395..108253 | Clytia hemisphaerica | exon |
| TCONS_00026902-exon-sc0000596-1491911889:108525..108558 | TCONS_00026902-exon-sc0000596-1491911889:108525..108558 | Clytia hemisphaerica | exon |
| TCONS_00026902-exon-sc0000596-1510915933:108525..108558 | TCONS_00026902-exon-sc0000596-1510915933:108525..108558 | Clytia hemisphaerica | exon |
| TCONS_00026902-exon-sc0000596-1575043694:108525..108558 | TCONS_00026902-exon-sc0000596-1575043694:108525..108558 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000596 | supercontig | sc0000596:107103..108558 + |
Blast
The following BLAST results are available for this feature:
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