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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00026843 ID=TCONS_00026843|Name=TCONS_00026843|organism=Clytia hemisphaerica|type=transcript|length=2028bp
AGTCAATGAAATAATTGGCACCAAAACCATTTCTGATCTCTCGCCTAAAC
TTCTACTACACAATAATCGCGAAATAACCAACGACAAAGACATAGCtgaa
actttcaataatttttatgTCCCCTCGGACTAACAAATACTTCATTGATT
ATTTAGGGGATCCATTATGTAACTCTATTCGTTTCAGGCAGATTACACCC
ACTGCTGTACTTAAACTTATCAATGATCTTGATGCTCAGAAGGCATCAGG
ACCTTCAAGTATTCCTACATCCTTCCTAAAAATGATATCTCCAACTGGAA
GCACCATATTATCTCACATCTTTAACGTCAGCATTAAAGAAGGCATCTAC
CCTGATTGTTAAAAAAAGCTAACATAAAACCTTTACACAAGAAAGACTCA
AAACTAGATGTTGGCAATTACAGACCCATTTCTCTGCTATccaacataaa
taaaatcttcgaaaaactccTTCATTTCAGACTAGTCAAATTCTTCGAAA
ACAACAACATCTTTAGTGAAAAGCAATTCGGTTTTAGAAAAGGTCACAGC
ACTAACCATGCTGTGATTGCCCTTACTGAAGTTGTCAGATCAGCATTAGA
TAATGGTAATTTTGCAGCTGGAGTTTTCATTGATCTTAAGAAGGCTTTTG
ATACAGTAGAGCATACCATCCTGCTACATAAACTGGTTCATTATGGCATC
AGAGGACCAGCTCTTGCTTTACTCAGGTCTTATCTCTCTAATCGTACTCA
CTGNCGATCTTATGAAGGCTTTTGATACAGTAGAGCATACCATTTTGCTA
CATAAACTGGTTCATTATGGCATCAGAGGACCTGCTCTTGCTTTACTCAG
GTCTTATCTCTCTAATCGTACTCACTGTGTCGATATAAGAAACACACATT
CTGATCATGTCCCCATCAAACATGGTGTCCCTCAAGGATCTGTTTTGGGC
CCCCTGTTATTCATCATTTATATNTAAGAAACACACATTCTGATCATGTC
CCCATCAAACATGGTGTCCCTCAAGGATCTGTTTTGGGCTCCCTGTTATT
CATCATTTATATTAATGGTCTCCATCGCTCCCTAGAAAACTCAGTAACTA
TTCATTTCGCTGACGACACTAGTCTTATTTGCTGTGATGAATCTATAAAA
CATCTGAACAGAAAGGTTAACAGGGATCTTGCTCTATTGGTCCATTGGCT
GAGAGCAAACAAAATATGCCTTAACGCCTCAAAATCTGAAATAATCCTAT
TTAGAAGTCCCAGGAACACTTTTACTAAACATCTTAATTTCAGACTTAGT
GGACCAAAACTTCATCTATCAAGCAAAGCTAAATATCTTGGAATCCTGCT
AGACGAGCATCTTTCTTGGGAACCTCAAATTCACAGTGTCTCGAACAAAC
TTTCTAGAACTGTTGGCTTCCTGTCAAAACTCAGACATTTTGTGGACTTC
AAAACACTTCTTTCTGTCTACTATGCTTTATTTGACTCACATATAAActa
ttgtcttcaaactttagGTCATACCACTCAAgcctctttcaaaaaaaaat
tgaagttcttcaaaataaagcctTGAGAGTTATACACTTTAAACATAGCA
GACACTCGGCTCGCACACTCTTTATTAGATCTTCTATTTTGCCAATCAAA
AAACAACTCAAAGTAAAGAACTGCCTTTTTGCTCTCGACCATATTCAAAA
TAATCTACCTAAATACTTTTCAAACTACCTTAGATACTCTCCTGTACACA
AAGGTACAAGACAGTCACCCAAGAAACTTGAACCGCCAACAACCAATACG
GTAAAGTATGGCTCTTACAGTGTAGCTTCCCTAATAACTAAGGACTGGAA
CGAACTCCATACTAAGGTTTTGATTCAAGACTTAAGCGAATGCTCTAAAC
AAActcttaaaaaaacatttacaccattttattttaactaaaCTTGCATC
TGATTAGACTCTGGCTATTTACTTTCCTCTCTCTTTGTTCTTCTTTATTC
TTTTGGTCCtttctttattattattttt Run BLAST on NCBI transcript from alignment at sc0000591:115448..117475- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00026843 ID=TCONS_00026843|Name=TCONS_00026843|organism=Clytia hemisphaerica|type=transcript|length=2028bp|location=Sequence derived from alignment at sc0000591:115448..117475- (Clytia hemisphaerica)
AGTCAATGAAATAATTGGCACCAAAACCATTTCTGATCTCTCGCCTAAAC
TTCTACTACACAATAATCGCGAAATAACCAACGACAAAGACATAGCTGAA
ACTTTCAATAATTTTTATGTCCCCTCGGACTAACAAATACTTCATTGATT
ATTTAGGGGATCCATTATGTAACTCTATTCGTTTCAGGCAGATTACACCC
ACTGCTGTACTTAAACTTATCAATGATCTTGATGCTCAGAAGGCATCAGG
ACCTTCAAGTATTCCTACATCCTTCCTAAAAATGATATCTCCAACTGGAA
GCACCATATTATCTCACATCTTTAACGTCAGCATTAAAGAAGGCATCTAC
CCTGATTGTTAAAAAAAGCTAACATAAAACCTTTACACAAGAAAGACTCA
AAACTAGATGTTGGCAATTACAGACCCATTTCTCTGCTATCCAACATAAA
TAAAATCTTCGAAAAACTCCTTCATTTCAGACTAGTCAAATTCTTCGAAA
ACAACAACATCTTTAGTGAAAAGCAATTCGGTTTTAGAAAAGGTCACAGC
ACTAACCATGCTGTGATTGCCCTTACTGAAGTTGTCAGATCAGCATTAGA
TAATGGTAATTTTGCAGCTGGAGTTTTCATTGATCTTAAGAAGGCTTTTG
ATACAGTAGAGCATACCATCCTGCTACATAAACTGGTTCATTATGGCATC
AGAGGACCAGCTCTTGCTTTACTCAGGTCTTATCTCTCTAATCGTACTCA
CTGNCGATCTTATGAAGGCTTTTGATACAGTAGAGCATACCATTTTGCTA
CATAAACTGGTTCATTATGGCATCAGAGGACCTGCTCTTGCTTTACTCAG
GTCTTATCTCTCTAATCGTACTCACTGTGTCGATATAAGAAACACACATT
CTGATCATGTCCCCATCAAACATGGTGTCCCTCAAGGATCTGTTTTGGGC
CCCCTGTTATTCATCATTTATATNTAAGAAACACACATTCTGATCATGTC
CCCATCAAACATGGTGTCCCTCAAGGATCTGTTTTGGGCTCCCTGTTATT
CATCATTTATATTAATGGTCTCCATCGCTCCCTAGAAAACTCAGTAACTA
TTCATTTCGCTGACGACACTAGTCTTATTTGCTGTGATGAATCTATAAAA
CATCTGAACAGAAAGGTTAACAGGGATCTTGCTCTATTGGTCCATTGGCT
GAGAGCAAACAAAATATGCCTTAACGCCTCAAAATCTGAAATAATCCTAT
TTAGAAGTCCCAGGAACACTTTTACTAAACATCTTAATTTCAGACTTAGT
GGACCAAAACTTCATCTATCAAGCAAAGCTAAATATCTTGGAATCCTGCT
AGACGAGCATCTTTCTTGGGAACCTCAAATTCACAGTGTCTCGAACAAAC
TTTCTAGAACTGTTGGCTTCCTGTCAAAACTCAGACATTTTGTGGACTTC
AAAACACTTCTTTCTGTCTACTATGCTTTATTTGACTCACATATAAACTA
TTGTCTTCAAACTTTAGGTCATACCACTCAAGCCTCTTTCAAAAAAAAAT
TGAAGTTCTTCAAAATAAAGCCTTGAGAGTTATACACTTTAAACATAGCA
GACACTCGGCTCGCACACTCTTTATTAGATCTTCTATTTTGCCAATCAAA
AAACAACTCAAAGTAAAGAACTGCCTTTTTGCTCTCGACCATATTCAAAA
TAATCTACCTAAATACTTTTCAAACTACCTTAGATACTCTCCTGTACACA
AAGGTACAAGACAGTCACCCAAGAAACTTGAACCGCCAACAACCAATACG
GTAAAGTATGGCTCTTACAGTGTAGCTTCCCTAATAACTAAGGACTGGAA
CGAACTCCATACTAAGGTTTTGATTCAAGACTTAAGCGAATGCTCTAAAC
AAACTCTTAAAAAAACATTTACACCATTTTATTTTAACTAAACTTGCATC
TGATTAGACTCTGGCTATTTACTTTCCTCTCTCTTTGTTCTTCTTTATTC
TTTTGGTCCTTTCTTTATTATTATTTTT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00026843-exon-sc0000591-1575043694:115448..117475 | TCONS_00026843-exon-sc0000591-1575043694:115448..117475 | Clytia hemisphaerica | exon |
| TCONS_00026843-exon-sc0000591-1510915933:115448..117475 | TCONS_00026843-exon-sc0000591-1510915933:115448..117475 | Clytia hemisphaerica | exon |
| TCONS_00026843-exon-sc0000591-1491911889:115448..117475 | TCONS_00026843-exon-sc0000591-1491911889:115448..117475 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000591 | supercontig | sc0000591:115448..117475 - |
Blast
The following BLAST results are available for this feature:
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