TCONS_00026791 (transcript) - C. hemisphaerica

Overview
NameTCONS_00026791
Unique NameTCONS_00026791
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1389

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00026791 ID=TCONS_00026791|Name=TCONS_00026791|organism=Clytia hemisphaerica|type=transcript|length=1389bp
ATTGGGAAGGAAAGAAAGTGGCACCATGTTCTTCAACTGTTTTGCCATCC
TTTCTTTGGCACTCGCTGTACATGGTGATCCAGTACCAAACTGTGGTACT
GTTGTGAAGAATTCAAGAATCGTAAATGGAGTGGATTCACAATCTGGACG
CTGGCCCTGGATTaCTAGACTAGCAACTACGGGTAATCCCCTCAATTGCG
GTGGCACACTAATCTCTGATCGCTGGGTGTTGAGTGCTGCACATTGTTTC
ACAGCTGCGGATAAAGACTCACTTACAGTTACTTTAGGGGACCTTACAAT
TAGTCAGGACGAAGAAGGAGAGCAGATAAGAAACGTTAAACAGATCATTC
CACACCCGCAATACAATGGGAACACTCTTGACAACGACTATTTGTTGATC
GAACTTGACAGCCCTGTAACAATCACCGATTACGTGCGGCCCGCTTGCTT
ACCATTTGGTCTTTCAAAAAATGCGTTCGATGATGCAAGACAGACTTGTT
ATATTACTGGCTGGGGAACAACTTCTTCTGGTGCAGCTTTTATTCCTGAT
GTTCTTCAAGAAGCATGGGTCCAAGTATACACGGACAGAAAATGTAAAAG
AGCATACCGTAACCAAATCACAGACCGAATGTTTTGCGCTAATCGAGTTG
TCAAGAAGGACGTTACTGATACATGCCAAGGAGACTCAGGTGGTCCATTA
GCATGCAAGGATGTATCCACTAACACATGGTTTGTCTGGGGAATCACATC
TTGGGGACAGGGTTGTGCCATAAGAAGAAAACCTGGAGTCTACGCATCTG
TTGTTGAGATGTTAGATTGGATTGGAACCAACACAGGAATCACAGCATCA
AAATGAATATAGAGTCTTCCGCTCATGAATAATCTAAATGAAACACTAGA
TTGTGCGGTGGCCTCTATCTGCCatgtgttttattttgtttttatagcAG
TAAAGATGTTCTATTTTACACTTGTTGCATTATTTTccgaaaatgcactt
ttttttattcatataTTTTTGGAGacttctcaaattttttaaaaaaacat
caGATTTATACTTAAAAAATTTAGCGAATTTGTAAATCTAACATTTTAGA
CTTAGCGAATCCGAAAGCGTAATATTTCATAGCTAGCAAATCCGTAAGTC
TAATATTTCAGACTTAGTGAATCCGTAAGTCCTACATTTTAGACTTGGCG
AATATAAGATGAATCTATTCAGtctcgaggggtaaatcacacAAAATTTG
AAGGCCATTAGCCTGGAAGTTTTCAGTGTGAATACACCCTTAaaggctac
ttagactacacaatatatttaCGAACAATATTTGACCTGATTTGACAATA
TAGTtctcggaccgtaatgtacgaagtaaataaCATGAA
Run BLAST on NCBI

transcript from alignment at sc0000587:130567..141606-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00026791 ID=TCONS_00026791|Name=TCONS_00026791|organism=Clytia hemisphaerica|type=transcript|length=11040bp|location=Sequence derived from alignment at sc0000587:130567..141606- (Clytia hemisphaerica)
ATTGGGAAGGAAAGAAAGTGGCACCATGTTCTTCAACTGTTTTGCCATCC
TTTCTTTGGCACTCGCTGTACATGGTAAGGCAACATGATTCTTCTAAAAG
CTGTCAGCTTGTCAGATTTTTTTCAATTTTATAACAATACATTTGACAGG
TTTATTGACCTCCATGAAAAAGAGGTTCAAAGGTTTGAAACTTCTGTAAA
AAAAGAGGGCTAGTTTAGATGACGTCATCAGCAAAGTTCCTTGAAGCTCA
TACCTTAAGGGAACTAATTTTTGGGGGAACTGATTTTTGCGGTTTTTGCG
TGTTTTGGCCCCAAACCGCAAAATTTAGTTCCCGCAAAAATTTTGTCGAC
CTACGGACCGCAAAAATTAATTCCCGCAAAGTTTTTCAAAATTGGTCATC
CGCAAAAATAAATTTAACGATAAATTTTCTTTAAGTTTTATTTCAAAGCT
TTTTTTGCTAATACAGTAAGCACAACTACAGGAAGTTTTTAACAGAAGAT
ATAAAGTAATGCGATATGCTACTGTCTCCTCAAGAAATCAGTCAATTGTA
ATAACATTGCTGGGAGTCTTAGTACATGGTTTCGGTTTTTTTGGTGGTCT
GCTTGGCGCAATGTCTGCCATTTTTGTACAAAACGTATCAACAGTATTTT
GGTTTATGAATTTTTTTATTTCAGGCTAGCTGACCGCAAAATTTAATTCC
CGTAAATATTAAGATAATTTAACGACCGCAAAAATTAATTCCACAAAAAG
AATTTTTTTGATGGCCTGCAAAAATTAGTTCCCTCAAAAATTAGTTCCCT
TAAGGTAATCAATCAGATGTTTGTGAAGAGCAAATTTCTCTGATCTTATG
GACTAGGTAATGAAAGATACCTTATTTTTTAGGTGATCCAGTACCAAACT
GTGGTACTGTTGTGAAGAATTCAAGAATCGTAAATGGAGTGGATTCACAA
TCTGGACGCTGGCCCTGGATTGTAAGTTAAAAAGGTTTTCGCGTGCAATC
TTTAGACAAAAATCGATGGTAATAGTCAGGCAGCTTTAACCCCCCCCCCC
CCGGCCCGGGGGGGGGGGGGGGGTTTGGGAAAAGGGGGGGGGGGGGTATA
CCCCCCCCCCCCCTTTTCCCAAACCCCCCCCCCCCCCGGGCCTGGGGGGG
GGGGGTACTTAGGCAAATGGAGGGTAAGGTATATGCCGCCCTTAAGGGCT
CTGGCCATATTGAATTTTTCATAATTTTCGTGTTTACAATGTGTTTTCTG
ACTGGTGTAACCAACAAAACTATGGCATGTTATACATTTTTTAGAGGAAA
ATACTTTGTCTTTACCACAAAAACGTATACGTAGTAAAAAATCGAATATT
TACTGAAAAATATATAATAAATAAATAAGCTAAGGCTATTGCCGGAGCCT
GTCCCGGTATGGATCTTGATGATAAAACATATTAAAAATGATAACATTAG
ATAAAAAAAAAATTAGATATTTGCAATTCACTGACAAGTCGTGATACATT
TTCTGTTAGACAAACTATTCCTGAATCTGAAAATTCAAAAATTGCATTGA
AAAAATTTGATGAAGAAGAAAATGAAGACATTTGCGAAGACAAATGTGTC
ATGTGTCACAATCAAATTAATATTCAAAGAATCTAAGATGGAGAGCACAC
ATCCCCATGTTAAGCTCAAGTAAATTATATGATTTTCCATATCCGGTTAC
TACATTTTCAGTTGAGGATATGTTTCCAAAATTTCTCACTTTAACGTTAT
GAAAATTGTAAAGAAAGTTAATTCTTTTTAATCATAATGACTGTTGAAAA
ACAATTATTGTGTTGGTATTTATTTTCTTACATTTTGTTAAACACACGCG
ACAACCTTCTACTCAGAATCATGTTCGAACTCGATAATTTTTTTCCGGAC
ACCCTGTACATGAGAAATTGGCAAAATTCAGTCAGTTGTCTTTCCAGTGT
CTATAATAATTCCTTGGTCTTGGTCAGTAAAACGAGTTTCTTTTGAAAGA
AATCTTTTGTCAGACTCCAAAGTGGGTAACAGCAATTACAGCAACTTTTC
AATTCTCTAAAGTTACTTTAATCATGCTTTAATCTATCCTAATTTTATAA
AATATGTATGTTCTGAGATTACACCTGTGATTTGATCGTGGTACGGCTTT
ATCCAAGATCGTGGATGATTGTCATGGCTACTTTCGTTCTCCCTGAGTGC
ACATTGAATTAAATCGGGATCTGTCTTATATAATATTCACACGCTGTGAT
ACTCACGGTATTTAAACTAATTTGTTCTTGAAGAATATCTCTACAGCGTT
GCATGCAGTCCTAACCGTTCGTTCCCTAGTGAAATCTTCACGAAAAGCTA
CCCACACTAGCCTTCCCTTGAATTTTCAACTTCTGAGTCGTCTTGTTACA
ATGCTAAAAAGTGAACTTTTTGAATGCTAAAAAGTGAACTTTTTGAATGC
TAAAAAGTGAACTTTTTGAATGCTAAAAAGTGAACTTTTTGAATGCTAAA
AAGTGTTTTTTGTAACATACGGCACGTCATACTAGATGGTGTATCTTTAA
CCATACTAACAGTAGATTTTCGGAAAACTTTTGTAAAAGCTTCTTCGTTT
CAAAATTTTGAAAATAGTGGCTTTTGATCAATTTTTCATCCCAATTTTTT
GTACAAAAAGAGTCATAACTTTTGAAACATCAATTTAGAAAATGTTTCCG
AAAATTTTTAGATAGTTCAATCTTTTGCAGAAAATTAAAAAAAAAAAGGT
TTACCCATTAAAACTTAGCATTTTTTGTAAAAGAAGTTAATATAACATTT
CATTAACGACTTTTTAAGGTTCATAACGTCATTTTTGTAATTTAATTGCT
AATTACTCTTGATAGAATAAATTCAGAAACAACTTATAAAGACAATTTTT
TGTTTAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNACCCCCGGGCTTTAAACGGTCGAC
TTTTTGTCAACTTTTATCAAGAAGGAGGGAAGGCAAGGAAAAAAGTCGAC
CGTCTGCTCTAGGTCTAAACAACATTGTTTCAACATTCAGATAACGACCA
TACATTCATCTGACAATAGTAAACACATCGAGTTTAAATCTTGAAGGGCT
AGAATAGTCGGGGAGCAGAATTAAATATCTCGAGTTTTAGAAGCGTTTTT
GCTTAACCCAAGAGAAAAATGGGGTTGTTATATACCGTTGGAACGGAAAT
TTTATGCTGATTATGGAAACCCAGGTTGTAAAAAGAAACGTTAGAAAGGT
ATCTCTTGAAGGGGAAATAGAGGGAATTTAAATAGTTCAATTTTTTTTGT
GTCGCTCAATTTTTATTTCTTAATCTTGTACACATTTTTTTATAAGCAGC
TCCAATTTTTGGGTCAGGGATGCAATTACTTAGCATTCTGGCTCATTTTC
TGAAAAATTTGCTTTGACCACCCCTGATATTATACCATATTTATTGAGTT
TTGGGAGTCTTCTTGGAGATTACTTATTTCCCATCTGAAACGCGTAAAAC
ACGCAGTTTTCAGACAAAACCAGAAAAAATGTAAAACCTATCGCCAGATT
TCGATTAGCTTGATTGGTTAGCTTTATATGAGAGATCTTTAAATTTTATT
AAATTTGAATCAAAAATTTGAATTGCTAGTGGTTATTACTAATCCCTACT
CTCTATTACTATCCCTATGTTTAATTTTACCTTTTCTTTTTCTAGACTAG
ACTAGCAACTACGGGTAATCCCCTCAATTGCGGTGGCACACTAATCTCTG
ATCGCTGGGTGTTGAGTGCTGCACATTGTTTCACAGCTGCGGATAAAGAC
TCACTTACAGTTACTTTAGGTATAGTAAAATACCTTATCGGCCAAAACTT
AGTCGGCCTTAATTATTAGTCGGCCTTAATTTTAGTCACCTCGTCAAAAT
TTAGTCACTAAGGGCCGACTAATAATTAAGTTTCGGCCATTTTTAAATTT
TTAATCGGCCCAATTTTAGTCGGCCTTAATTATTAGTCGGCCCTAGTTTT
AGTCACCTCGTCAAAATTTAGTCACTAAAGGCCGACTAATAATTAAGTTT
TGGCCATTTTTAAATTTTTAGTCGGCCCAATTTTAGTCGGCCCTAATTTT
TAGTCGGCCCTAATTTTAGTCACCAAGCCAAAATTTAGTCACTTAGGGCC
GACTAACTTTTGGCCGATAAGGTAGAATAAATTCACCCAAAGATTTATTA
TACACTGGATAAACGACTCATAAAACGATGGAGAGCGACCATTGTATTTT
CTTTGTTTCAGAAAACAATGGATGTTCTAGCTTTNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNAAAAGTTCTCTAGCACTTTCTTTTTGTACATTTACAGAAAAA
AAAGTTTGAAAGTAAGGCTAGCATTTCGAGCTGGATACATTTGTGAAATC
TAATGTGAGAAAAACATCAATAGGCAAGACATTCAGACAAAATGCTTATA
ATGACACAAAATTTTCAATTGGAATCTTTCCAAGACTGTCCCCAGAACAG
CTGAAATTAATATACATAAGACTTGAGTGTCTTGGTTCCACTGTGGTATG
AAAATCCTTTGGAGGCANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNGGGAGAGCTTAAAATACAATTTTGTGAAT
ACACACTTAAAACTTTCTACTCAATCGCATGTTCAAACTCGATACTTTTA
TTAGGGACACCCTGTAGTACACGAGAAATTGGCAAAAATCTGTTACTTGT
ATATCCAGTGTACAGGGTGTCCCTAATAAAAGTATCGAGTTTGAACATGC
GATTGAGTAAAAAAGTTTGTGTGCGTTATCGCTAAAATATAAGAACGTTC
TNTGCGAAAAATCATTTAATGAGGGAAGGAGAGTGAACAATAATATCATT
ACTGCGGACATAGCTACAGGGTGTCCCTAATAAAAGTATCGAGTTTGAAC
ATGCGATTGAGTAAAAAAGTTTGTGAGTGTTATCGCTAAAATATAAGAAC
GTTCTCCATCACATAGGCTCATTACAAAAGGTAGTTACAACGTATAAATT
AATCAATAGCCCTTTTTACTATTCCCCTGNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNTAGGCTCATTACAAAAGGTAGTTACAACGTATAAATTAATC
GTAATGACAAAGAAAAAAGAGGGAGAGCTTAAAATACAATTTTGTGAATA
CACACTTAAAACATTCTACTCAATCGCATGTTCAAACTCGATACTTTTAT
TAGGGACACCCTGTATAATAAATCCTTGATTTACCGTTGGCCTTGTTATA
GATATTGTACGTGTATAGCCCAGTAATGTAAAAATTCAGATGAATCATCA
TTCAGATGATAGTTGACGGACTATACTATCCCAGCTGGTACACAACGTTG
ATTCAACGTTTATCTAATGTTCACGTCCATATAACGTTAGATGAACGATT
TACCAAGGTTGTGTGCCAGCTGGGATAGCTAAACTAGACGCCACCCGCGT
ATTTTTTTTTCTACGCAATTAACGTCTATACCCCTTTGCGACTTTTTCGA
ATGTTTGGAGCTCAGGTTTTTGGTGGTGTATATTCAACTCGGCTTCACTT
CATTGAATGTTACGCCACCTCGGGTTAATAAATCTCAATAACCAACTTTT
ACCTTATTGAACATCTGCTTATTATTCGACCGCCAGAGGCGGGTTTTTTC
ACATTGGTCTTCTAATCTCGCTTTGGTTGGGCTCGCTACTTTGATGACCA
TCATTCTTTGATTTCGCTTGACTCGATCAATTTAGTACTCACCGTATACA
TCTTTTCGTTTGAAAATGAATAATCGAGTCTTATCTATTTAAAATGGTAG
CGTTGCTACGATCAATTTTTCATTAAAATGATAGCTTTGCTACGACCATT
TTTTTACCGGCGGTCGTTTCTAGTTAGTTATGTTATTCCTATTGTCTTTA
TTGTTTGATTTCTAGGGGACCTTACAATTAGTCAGGACGAAGAAGGAGAG
CAGATAAGAAACGTTAAACAGATCATTCCACACCCGCAATACAATGGGAA
CACTCTTGACAACGACTATTTGTTGATCGAACTTGACAGCCCTGTAACAA
TCACCGATTACGTGCGGCCCGCTTGCTTACCATTTGGTCTTTCAAAAAAT
GCGTTCGATGATGCAAGACAGACTTGTTATATTACTGGCTGGGGAACAAC
TTCTTCTGGTGCAGCTTTTATTCCTGATGTAAGTTTTTCTCCATGTTTTT
TTTTTTAAATACACGCTTTTTTAATAAGAACATCTAAACTTTTCAAAGTC
TTTGGATGTTCTTAACTTTTTGAGCTTTCAATCCAAAAAAAGGTGTTTTT
ACTTTCACCATTTTGTGAGTATTTTTTATGAAATTTTCTTACAAAATGTG
TGTTTTAGAGTCCACAAAGCCTCAAAATGTTCTTAATATTTGCTATCGAA
GCCTTACGTTATGAATCTTATAAAGTCTGATATAGACATTCAAAGCCTTC
TGTTCTTGTATAGTTTGCGGTTCTTATAAAAAGACGTGTAGTGCACTACC
ATAATTGCTCTAATTTAGTGTGTCCTCTAATTAGTGCGGATAAATTATAT
TGGCAATTTCGGACTAATTTAAATCCTCTAATTATTAGTGCGGGTAGTGT
TTTACCCATTTATGATTTCCCTCTTTAATGATTTAGTACGGCATAGTTCA
AATTTTCCTCTAATCATAGTGCAGTAAAAAAGTTGTCGGTTTGAAGCAAT
TCGTCTCTTCCTGTCTTTAGTGCGGCACCTCCAAAATAATTTTTCCGGCC
GCACTAAATTAAAGAAATTACGGTATTAAGATGTCATCATTGGTTCACAG
GTTCTTCAAGAAGCATGGGTCCAAGTATACACGGACAGAAAATGTAAAAG
AGCATACCGTAACCAAATCACAGACCGAATGTTTTGCGCTAATCGAGTTG
TCAAGAAGGACGTTACTGATACATGCCAAGGAGACTCAGGTATGTCAGCT
CCTTCACTTATTTTGTTCTATTAGCCTCAATATTTTCGCATCTTGTCGTA
TCGGGTTAAAATTGAGGCTTTGTGACCGGACTTTTATTAATTCAAATTAA
TCCTTAAATTACTTGGAAGTCAACAATTCCAGTCCCATCCCTTGCTTTTG
AACTTTTTTTTTCATTTTTTGATTCTTTAGGATCATCGTTCATTTAAAAA
TATTATTAGAAAAGAAATTAGAACGAAAATAGTATAAATCATGAGAGTGC
CCCTGATTGGGTGAATTTGACAATACCTTTATTTTTATTGAAGATACCAT
TAACGATAACGTATATCCTACCATTTGCTTACACAGCAACAAAAAAAAAA
AACTTTCCTCCTCTGCCGCGCTAGGCACCCACAAATTTTGAAACATTATT
TTGTTAATTTGCCTATGTCAGCATTAGAGGCGCGCCTCCTTTCTATATAA
AAAAAATAAAAGATCTTTTAACCAGAGTATATCAAGTCTAAGGAAATAAT
AATATAGAAAACCTGAAAGGTTTTATTTACATAAGTGTTCCCATTTCATA
CCAGACACATATTTCATATCAGGACAGTATCTCCCTATTGTTAAATTTTG
TTGAATAAGAAATAAATTTCACCCTTAGCCAAAGTGAATTATTACTTACT
ATTTTTACAAGACAATACGTCGAAAAAGCATTCATATAACGTTCATAACA
TCTATATGGACAAAGTCATGACGTAATCCTTCATTCGTAAAGAAGTAAGA
GTAATATCGACATTCAACTGTCAGATAGTGCTTTGTTATTCACTTTTAAA
GGCTACTTAGACTACACAATATATTGGTGAGCAATATTCGACAATATACT
TTCGGACCGTAATGTACGTACCGTGAAAAGCACAGGCCAAAATCATAGAT
TGATCTGTGCCGACCAATCGAGATTATATTCAGCGCGCAATCAACGCAGA
GAAAAGTAACCATGACGACCATCCAAGATCTTGGATGAAGTTCAAAGTTG
ATATTTTTATTCCCGTCGTTGAAAACACAACTTAAAAATGTCATCAATGC
TTTTCAAAAAATAGTCAGTGATAGAGAATCATAACATAAAGATCTGCCTA
TTATTTCGATTCCATTAAAGTAACATTACCAAAACTAATAGTTTAGAAAT
TACTGTTATACATTTGGGAATCATGTAAAAGATCTCTTATATTCTTTGAA
AACTCAACCTCTGATACTCAGGGTACAAAGTAAATAACATGAAATAATAG
AAATCCATCTCTGTCCCCTAGAGTGTTCTGTTTTTATAAGAAAAATGAAT
AAGCAGACAAAGTATTAATGCAGTACGTTTGCATATATTTTGCTATGATG
TTCCCGCTTTTCATCAAAATAATATTTGCAAAAGATACCCCAAAAGCTTC
TTTGTGAATGAAACCTAATTTTATCAGCGTATGTTATGAATTTGAGAAGC
TTTCATGATTTCTCTTTAAAAATTTCGGATGTAAATATTTTGACAAATAT
TGTTTCAATTGACTCAATTTTTTCCATAATCAGACATACCGACTATCTGA
AAATATCAGTTAGACAGTGAGGCACCCCGCGGTGTAGCGCGGTATTTCAA
ATGAAAAAGAGCTATTTATAATCTTAGAGAAGAAACTTTGCTAATGAAAA
CAATGTTTTTCATTTTTTAAATGGTCATTCACCGATGTTTTACAGACCCT
CTTGATAATTAAAAGTTTTTAATCGTGAACAATAAATGCAGCAGCAGAAT
CATTGGCTAAAAAGAAATCCAAATTTCACGAATTTGTAATTAAAAAAGTT
TAATTTCATATCAAATTTTAATGTCAGGGACAGAGATAGAACAAGGCTTT
TTCAAATGTGCGTTATCCAGCTACGCTATAGCCTGGATATCCAAGCTCAA
AATTTTAGAAAAAACAAAATTTACCTCAACATACAAAGTTCTAAAATTAT
AGAGCTTGAACTCCCTAGAGAATGAAAGTGAAAACCCATGTTTCCAAGCC
AACCCAGGGCAGCAAAACAGAAATTAATAAAAAGCAGTCTTACAAGATCT
AAAACTATTTAAACATCCAAAGATTACACCAAAGTCCATAAAAAAGTTTG
CATGCATTATCATGACCAAGCATGTTTTCTGGGAAAATGAACTTGCCTCT
GTTTTCTTCTTTTTCATGTTTTCATGTAGCAGAAAGCCCTATCTTAACTA
GCAACTGGAGGACTATCCTATTTTTGCTTTAGAATTGCTCAACGCCGTGT
AGATTGGCCCTTACGGTTTTAGCGAAGTGAGCNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNAAACCAGAACATAAAATATAAAAAACTAGACTGTGA
AATAGTTTACAGCCTGGATATCCAGGCTAGCTACGCTATAACATATCCCT
GCTCAGAGTAAGTTATATTTTAGCATCGTTTCTTTACCAGGTGGTCCATT
AGCATGCAAGGATGTATCCACTAACACATGGTTTGTCTGGGGAATCACAT
CTTGGGGACAGGGTTGTGCCATAAGAAGAAAACCTGGAGTCTACGCATCT
GTTGTTGAGATGTTAGATTGGATTGGAACCAACACAGGAATCACAGCATC
AAAATGAATATAGAGTCTTCCGCTCATGAATAATCTAAATGAAACACTAG
ATTGTGCGGTGGCCTCTATCTGCCATGTGTTTTATTTTGTTTTTATAGCA
GTAAAGATGTTCTATTTTACACTTGTTGCATTATTTTCCGAAAATGCACT
TTTTTTTATTCATATATTTTTGGAGACTTCTCAAATTTTTTAAAAAAACA
TCAGATTTATACTTAAAAAATTTAGCGAATTTGTAAATCTAACATTTTAG
ACTTAGCGAATCCGAAAGCGTAATATTTCATAGCTAGCAAATCCGTAAGT
CTAATATTTCAGACTTAGTGAATCCGTAAGTCCTACATTTTAGACTTGGC
GAATATAAGATGAATCTATTCAGTCTCGAGGGGTAAATCACACAAAATTT
GAAGGCCATTAGCCTGGAAGTTTTCAGTGTGAATACACCCTTAAAGGCTA
CTTAGACTACACAATATATTTACGAACAATATTTGACCTGATTTGACAAT
ATAGTTCTCGGACCGTAATGTACGAAGTAAATAACATGAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_015048XLOC_015048Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00026791-exon-sc0000587-1575043694:141533..141606TCONS_00026791-exon-sc0000587-1575043694:141533..141606Clytia hemisphaericaexon
TCONS_00026791-exon-sc0000587-1575043694:140636..140724TCONS_00026791-exon-sc0000587-1575043694:140636..140724Clytia hemisphaericaexon
TCONS_00026791-exon-sc0000587-1575043694:137388..137511TCONS_00026791-exon-sc0000587-1575043694:137388..137511Clytia hemisphaericaexon
TCONS_00026791-exon-sc0000587-1575043694:134629..134891TCONS_00026791-exon-sc0000587-1575043694:134629..134891Clytia hemisphaericaexon
TCONS_00026791-exon-sc0000587-1575043694:133868..134006TCONS_00026791-exon-sc0000587-1575043694:133868..134006Clytia hemisphaericaexon
TCONS_00026791-exon-sc0000587-1575043694:130567..131266TCONS_00026791-exon-sc0000587-1575043694:130567..131266Clytia hemisphaericaexon
TCONS_00026791-exon-sc0000587-1510915933:141533..141606TCONS_00026791-exon-sc0000587-1510915933:141533..141606Clytia hemisphaericaexon
TCONS_00026791-exon-sc0000587-1510915933:140636..140724TCONS_00026791-exon-sc0000587-1510915933:140636..140724Clytia hemisphaericaexon
TCONS_00026791-exon-sc0000587-1510915933:137388..137511TCONS_00026791-exon-sc0000587-1510915933:137388..137511Clytia hemisphaericaexon
TCONS_00026791-exon-sc0000587-1510915933:134629..134891TCONS_00026791-exon-sc0000587-1510915933:134629..134891Clytia hemisphaericaexon
TCONS_00026791-exon-sc0000587-1510915933:133868..134006TCONS_00026791-exon-sc0000587-1510915933:133868..134006Clytia hemisphaericaexon
TCONS_00026791-exon-sc0000587-1510915933:130567..131266TCONS_00026791-exon-sc0000587-1510915933:130567..131266Clytia hemisphaericaexon
TCONS_00026791-exon-sc0000587-1491911889:141533..141606TCONS_00026791-exon-sc0000587-1491911889:141533..141606Clytia hemisphaericaexon
TCONS_00026791-exon-sc0000587-1491911889:140636..140724TCONS_00026791-exon-sc0000587-1491911889:140636..140724Clytia hemisphaericaexon
TCONS_00026791-exon-sc0000587-1491911889:137388..137511TCONS_00026791-exon-sc0000587-1491911889:137388..137511Clytia hemisphaericaexon
TCONS_00026791-exon-sc0000587-1491911889:134629..134891TCONS_00026791-exon-sc0000587-1491911889:134629..134891Clytia hemisphaericaexon
TCONS_00026791-exon-sc0000587-1491911889:133868..134006TCONS_00026791-exon-sc0000587-1491911889:133868..134006Clytia hemisphaericaexon
TCONS_00026791-exon-sc0000587-1491911889:130567..131266TCONS_00026791-exon-sc0000587-1491911889:130567..131266Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000587supercontigsc0000587:130567..141606 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0	0.0340421	0	8.63613	7.04034	0.154618	0.497504	0.101344	1.07576	0	0.0200237	2.87395	7.42798	0	0	0.137885	0.099421	1.99723	1.31929	0.0295022	0	0	0	0.0645608	0	0	0.0879956	0.0333708	0
Blast
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BLAST of TCONS_00026791 vs. Swiss-Prot (Human)
Match: TMPS9 (Transmembrane protease serine 9 OS=Homo sapiens GN=TMPRSS9 PE=1 SV=2)

HSP 1 Score: 178.333 bits (451), Expect = 8.358e-48
Identity = 93/239 (38.91%), Postives = 134/239 (56.07%), Query Frame = 2 
Query:  107 KNSRIVNGVDSQSGRWPWITRLATTGNPLNCGGTLISDRWVLSAAHCFTAADKDSLTVTLGDLTISQDEEGEQIRNVKQIIPHPQYNGNTLDNDYLLIELDSPVTITDYVRPACLPFGLSKNAFDDARQTCYITGWGTTSSGAAFIPDVLQEAWVQVYTDRKCKRAYRNQITDRMFCANRVVKKDVTDTCQGDSGGPLACKDVSTNTWFVWGITSWGQGCAIRRKPGVYASVVEMLDWI 823
            K +R+V G  + SG  PW   L   G+   CG T++ DRW+LSAAHCF     + +   LG  ++           +++++ HP YN   LD D  ++EL SP+    Y++P CLP  + K  F   R+ C I+GWG T  G A  P++LQ+A V +   + C   Y   +TDRM CA  +  K   D+CQGDSGGPLAC++ +   +++ GI SWG GCA  +KPGVY  +  +  WI
Sbjct:  500 KPTRVVGGFGAASGEVPWQVSL-KEGSRHFCGATVVGDRWLLSAAHCFNHTKVEQVRAHLGTASLLGLGGSPVKIGLRRVVLHPLYNPGILDFDLAVLELASPLAFNKYIQPVCLPLAIQK--FPVGRK-CMISGWGNTQEGNATKPELLQKASVGIIDQKTCSVLYNFSLTDRMICAGFLEGK--VDSCQGDSGGPLACEE-APGVFYLAGIVSWGIGCAQVKKPGVYTRITRLKGWI 731

HSP 2 Score: 170.244 bits (430), Expect = 4.126e-45
Identity = 93/237 (39.24%), Postives = 131/237 (55.27%), Query Frame = 2 
Query:  116 RIVNGVDSQSGRWPWITRLATTGNPLNCGGTLISDRWVLSAAHCFTA-ADKDSLTVTLGDLTISQDEEGEQIRNVKQIIPHPQYNGNTLDNDYLLIELDSPVTITDYVRPACLPFGLSKNAFDDARQTCYITGWGTTSSGAAFIPDVLQEAWVQVYTDRKCKRAYRNQITDRMFCANRVVKKDVTDTCQGDSGGPLACKDVSTNTWFVWGITSWGQGCAIRRKPGVYASVVEMLDWI 823
            RIV G+++  G +PW   L        CG  +I+ RW++SAAHCF    D       +G   +S  E       V QI+ HP YN +T D D  ++EL SP+    +++P CLP   + + F  +++ C I+GWG         P+VLQ+A V++     C   Y + +TDRM CA  +  K   D+CQGDSGGPL C++ S   +F+ GI SWG GCA  R+PGVYA V  + DWI
Sbjct:  202 RIVGGMEASPGEFPWQASLRENKEHF-CGAAIINARWLVSAAHCFNEFQDPTKWVAYVGATYLSGSEASTVRAQVVQIVKHPLYNADTADFDVAVLELTSPLPFGRHIQPVCLP--AATHIFPPSKK-CLISGWGYLKEDFLVKPEVLQKATVELLDQALCASLYGHSLTDRMVCAGYLDGK--VDSCQGDSGGPLVCEEPS-GRFFLAGIVSWGIGCAEARRPGVYARVTRLRDWI 431

HSP 3 Score: 170.244 bits (430), Expect = 4.573e-45
Identity = 100/252 (39.68%), Postives = 133/252 (52.78%), Query Frame = 2 
Query:   83 VPNCGTV-VKNSRIVNGVDSQSGRWPWITRLATTGNPLNCGGTLISDRWVLSAAHCF-TAADKDSLTVTLGDLTISQDEEGEQIRNVKQIIPHPQYNGNTLDNDYLLIELDSPVTITDYVRPACLPFGLSKNAFDDARQTCYITGWGTTSSGAAFIPDVLQEAWVQVYTDRKCKRAYRNQITDRMFCANRVVKKDVTDTCQGDSGGPLACKDVSTNTWFVWGITSWGQGCAIRRKPGVYASVVEMLDWIGTN 832
            +P+CG      +RIV G  +  G WPW   L        CG  L+++RW+LSAAHCF    D       LG   +S  E   Q+  V +I  HP YN  TLD D  L+EL  PV  +  VRP CLP    +   D  R  C ITGWG+   G +     LQ+A V++ +++ C+R Y  QI+ RM CA     +   D+C GD+GGPLAC++ S   W + G+TSWG GC     PGVY  V  +  WIG +
Sbjct:  814 LPDCGLAPAALTRIVGGSAAGRGEWPWQVSLWLRRREHRCGAVLVAERWLLSAAHCFDVYGDPKQWAAFLGTPFLSGAE--GQLERVARIYKHPFYNLYTLDYDVALLELAGPVRRSRLVRPICLPEPAPRPP-DGTR--CVITGWGSVREGGSMARQ-LQKAAVRLLSEQTCRRFYPVQISSRMLCAG--FPQGGVDSCSGDAGGPLACREPS-GRWVLTGVTSWGYGCGRPHFPGVYTRVAAVRGWIGQH 1056
The following BLAST results are available for this feature:
BLAST of TCONS_00026791 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
TMPS98.358e-4838.91Transmembrane protease serine 9 OS=Homo sapiens GN... [more]
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