TCONS_00026765 (transcript) - C. hemisphaerica

Overview
NameTCONS_00026765
Unique NameTCONS_00026765
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2155

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00026765 ID=TCONS_00026765|Name=TCONS_00026765|organism=Clytia hemisphaerica|type=transcript|length=2155bp
ttcagaCATAGCAACAAAGCAAAATAATAAATctacaaaaaattattata
tataaagcaaagaacgtaagacaaaacataattcataaaACCATGGCATA
TCAAAACCATCATATTGGAATGCACCAAGGGATGCATGGTTTAAGACATA
CAGAAAAATATGTATGGAATGTTGAATATGATTTTCTTGGTAATGGTGCA
ACTAGTATCGTTTATAAATGCCGAAAAAAGcAAGATGGTAGACATTACGC
GGCAAAAGTGATGAACAAACGTTCCCAAGGGAGACGAAATGATATAATGG
AACGTGAAATCCACATTTTACAACAACTCAAACATCCGAACATTGTCCAA
TTTATTGACCTAGAATACACAACGTCTCAAAACGGTGAACGTAACGCAGT
CATTGTCATGGAATTATGTGGAGAAAGTTTACACACGAAATTAACTCACC
CTGATAATGCGTTTGGTCTTGAAGAGGAGACATTCAAATCTGCCGTCTAC
GATATCAGTCTTGGTATGGAGTATCtgcgaaatcagaaaatcattCATCG
TGACTTGAAGCCTGGTAACATCCTCTGTGTTCCAAACATCGAAAACGGAA
GTACAACGTACAAAATTAGTGATTTTGGGGCCGCAAGATTTCTTGAAGAT
GGCGGTGAATTTACTTCCATATTTGGTACCGAAGAATACCTGcATCCGGA
CATCTACGAAAAAGCTATCATGAATCGGCCGAAAATGGCTTTCAATGATC
AAGTCGATTTATGGAGCTTAGGAGTGACATTCTACCATCTGGCCACTGGA
AACTTACCTTTTTGCCCGTTCAAAGGAAGAAACGACAAAATAACGATGGA
CGAAATGATTACCAAAAAGAAACCTGGGGTCATATCATGTCATCAATTAA
AAGATAACGGCCCGTTGGAATATTCTAATGAACTGCCTATGGAATGTCGA
ATGTCTAAAAGTTTGAAGAATCTAATTACACCGGTATTGAGCCGTTTATT
GGAGACGGACGCCAAGCGCGTGATTCCTTATGAcgaatttttcaaagaaa
tcaaaaggatTGTGAACAATAAGGTTTTGCATGTCTACGTTAGCCGGACC
AGTACTATTGACAAGATCTACATGCAGCCGGACAAAACGTTATCACATCT
TCAAGACACTCTCGCTTTGGTGACTGGTATCAAAGAAAGTGATCAGGAAC
TTTTTCACAACTTCTCAGAATTCAAACCAGATTTCAACATGAAAATACAT
AACTATCCGACTTTTACGTTGGACAACCCGTTGTTTTTATTCAGTAAAGA
TCACTTGAAATCACAACAAATGGAACAGAACAAACTACTGATAGGAAATG
GTATTTACACAATCCACCTAccacctggtgctcaaattctgaaaaaatct
tGTAAACTGCAAAGAAAATCAGAGAAGTTGGCACACGAATGCAAAGCTAT
TTTGAACGCCAGAAGTTGTTTAAAAATGGCAACccaaaaagtctttgaaa
gcATTACATGCAATTGCGAACATATTGAAGATAAGATCAAAATCAAATAC
CAAAGTTTAGAAaattataAGAAAGTCTTGAGCAGAATATCAAAATCAGC
CGATGGTAAGTTTGGAACATAACTTCAGTTCTCCAAGCATTGGAATTACT
TCGTTTTAAACTTGTCCAGCAGTGTTGTAACTTTTTCTTGTGTGGTCGTG
AATCCCTCCAGTGGAAATACAGTATTTTTGTCTTGCTTGTCTTGGAGTTT
CTGATCCttaatcaaaaatgatttatctAAACTACAGGTTTATCATGATT
TTCAACCAGATTCATAAAAACTGGTTCAGGTAGAACCTGAACATTGCTGG
ACATTCTCGCCTTGTTTTTTGTCTTACGCTAATAGCCATAGCAAGACTAC
AGTCTTCTAAgtagtttttttctttctttagagCTGGACAAGATAAAGAA
GGCGGAAGCTCTGTACCAACAAGGTTTGGCAGCCCTGGCGACGCTGAAAG
ATAAAATCAAGAACATATTGAAAAGTGATACGCTAGATGCAACATTTTTG
AAAGCTACGGAAGAAGTCAGCGATCTACCTAGTCCATTGGAGCTGACGAG
TTGTGTGAAAATCATCTATGATCTCGGCATGCGAATCAGTAGAGAAAAGT
CTCGA
Run BLAST on NCBI

transcript from alignment at sc0000587:74428..90535+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00026765 ID=TCONS_00026765|Name=TCONS_00026765|organism=Clytia hemisphaerica|type=transcript|length=16108bp|location=Sequence derived from alignment at sc0000587:74428..90535+ (Clytia hemisphaerica)
ttcagaCATAGCAACAAAGCAAAATAATAAATctacaaaaaattattata
tataaagcaaagaacgtaagacaaaacataattcataaaACCATGGCATA
TCAAAACCATCATATTGGAATGCACCAAGGGATGCATGGTTTAAGACATA
CAGAAAAATATGTATGGAATGTTGAATATGATTTTCTTGGTAATGGTGCA
ACTAGTATCGTTTATAAATGCCGAAAAAAGGTTtgtatatttattttgtt
tggTGAGTAGCTAAACTATGTGTTACATAGGTAGAGATGACTAGCAAAGG
GAAAATAGACCTCGTTACCTTCTCATAgatccggtaggatttttttcagc
cagtgggggtaaaaataatggTGAACTGGGGTTGATATTCCCATTTTTTT
ACGGCTGgagatttaaattcttttgttttcaagtcagaaaattcagtggg
gctGGAAAAAGTCGGATAATATTTTacaggattggtttatttgattattt
tcagaagggtcaaaaattggagtataattttccaccagagacgatatttt
ggtcaattttccaaGTGGGTATGTGAGAAGGTGTCTTTGTACAAGtcact
gatttgaaaatcagaaagttgttaaaattgttaaaatcgTTTGGAAGCCT
TATACTTTCTCATTCTCGCTCACATCTATCAAACAAGTACCAGGGGTGTT
TTCGAGCAGCTAACTTCTAAATTGTTAATTCTGCTCAACTATCATGGTGA
ACAAAGATATATTGGCGTAATTTATAAAATGAAATGACAATGATAATGAT
AatagtacagttgacgctctctaattcgacattcttCTATTCGATATGTT
CCAGTTTCGGTAATAAAGTCgtcgtcaacaagaaactctcgtgAATTGTg
ctctactatttgatacgctgcatttttgggacaagctggagtttatACAA
ACTCTTTCTTTATTTGGTTAATCGTTagcctgtaataaaacaattttgtt
acttttctaaagaacgcgtcatctctattactttaaAAGACCAATCAGTG
aagtattttataaaaactccagaacaTCTCCCatttttcgatgaaaatcc
aattccacTTAAataaattcgaattagagagagcatcaactgtatagagg
taaatgtttatttttagcAAGATGGTAGACATTACGCGGCAAAAGTGATG
AACAAACGTTCCCAAGGGAGACGAAATGATATAATGGAACGTGAAATCCA
CATTTTACAACAACTCAAACATCCGAACATTGTCCAATTTATTGACCTAG
AATACACAACGGTAATCTTCTTCTTTTAATCTTCAAAAATAGCAATCAAG
AGTTTAAGCATGGTTATACATGAGTTacgaaatgttcttaacatgttctt
attttcgccatttttagagtatttttgtccattttcctatgaaattcggt
gttccagagtccgcaaagccttaagatgctcttaacttgttcttaacatt
ttggccatcgaagccttatgttcttatataatttgttcgtATAATAAAAG
GTGTATTTGTGAATTCAATAGTTTGCTAAATTTCCGAAATCGCAAAATTT
GGCATGTGAAACAAACTCACtctttaattcatgatattcatgacgtaatg
ttttctacgaaaatgccccggttttagccagtagtagcaattttaaacta
gacaaaagttgtataaaatttgccactactggcaaaaaccggggtctttc
cgcaGAAAACATTACCtcataaatatcatgaattatttcTTTAGTCTCAA
AACGGTGAACGTAACGCAGTCATTGTCATGGAATTATGTGGAGAAAGTTT
ACACACGAAATTAACTCACCCTGATAATGCGTTTGGTCTTGAAGAGGAGA
CATTCAAATCTGCCGTCTACGATATCAGTAAGTTTTTGTACAGTCAATCG
TTTAGACGAGctcaatttaatttgttgttttacgggccaagctacccaaa
aaagggGGTTGGTCGATcggcgaaaaaaaataaaataaaagtagaattta
aaatatatttaaaatcttttaaaaagccAGCAAAAATACTACATCTTGAC
GAAagtgcgaaatagaaaataaagagACATAaaaaggtcgaattcatgga
taaaatgaaaaattgcacacaaaattttcaaaaccaattATCCAATTATC
TGTTTGCTTAGCTTATAACTagcggaggtcctataaatttaccaactttt
ctcaggatcgaatcataggaatcttttagtacaaaggtgcaaaatggtag
tggccaaaatgtgacggatcccgatttttgaaaaaaaaaagattcgtttt
tcagccaaaaaataataagtgtttctagaaaactcaaaccattgccctcc
accgtgacattttcatcttaaaaaaaactaataaaaataaaaatatggcT
ATTAACATTGACGTATGcctcggtgatgtatattcaactcggcttcgcct
ctttgaatattacatcacctcgggttaataaatccaataaccaacgaaaa
cctattgaatatctgcttattaatAAGCAGCATACGTCAATGTTaatagc
catattattatttttattagtttttttttaagatgaaaatgtcacggtgg
agggcaatggtttgagttttctagaaacacttattattttttggctgaaa
aacgaatctttataagaatcactatttataagcatagatcaatgttctta
gccaaattattatttttgttattatttttcctaaaagaagaaaatgtcac
ggtaaaCCTtgtttattaagctgtgcatttttctgatagtggattgtttt
tataaagaaaagtgtttaatagcttttttatttctttttcaaaaatcttt
ttcaatagtgttgatagtttctcccaaaagatatgctttcatttttcttt
atttttttgtattttgaccagttatgtcttatgtgtttcaatgttcattg
attagtttgacaaacaggtaggtccataaaagtatcatttGTTTCTCTAT
CTGTCTATTCTATAAACTGAGAATTTGAACTTCTTATCCACACGAACATT
TATTATCAGGTCTTGGTATGGAGTATCtgcgaaatcagaaaatcattCAT
CGTGACTTGAAGCCTGGTAACATCCTCTGTGTTCCAAACATCGAAAACGG
AAGGTATAAactgttttttttagttttgtgcGAAGGTTGTAATTCTGCAA
TGTCTTCGACATCACAACATAGACTCAACAACTGATTGGTttataagtga
cgtaaaattaaTCAATACCTTGCATCGAATCAGATGTTGGGTCCGTaatg
taatgttagaagacattgcaatgatgcatatcatgaataaacaCAGCGGC
CTAATTTCATCATGCTCCAAAAAATTTTGGGTGGTTGGCTTATTCTGGTT
GTTTTGGAGTGACGAAGAAAAAGCTGAATGAATTTATGCCATACTTTCTa
tcattttgacttttaattaattttttcaattacaTCAATTTGATAGGAAA
TATCAAACATTCATAAACGTAACGAGCTTACTTCCCGATATTTgctctat
caaaagtaaaccATTTGTTTCACTAGTATCTCAGTGAAATGTTTGATATT
TCCTATTAATGTAATTGAAATAACCTTCTCTGTTAACCCTTAAAATGTAC
TTTGGTAACATTTGTATATGTAGAGGTTACATTTAATGAATAATGACAAA
TATATTTCTTGCAGTACAACGTACAAAATTAGTGATTTTGGGGCCGCAAG
ATTTCTTGAAGATGGCGGTGAATTTACTTCCATATTTGGTACCGAAGAAT
ACCTGGTAAGTTTATATGTAAATCTGTGTGACAAAACTGACATGTAGCTT
AACCAAAATAGACAAAATAGCTAGAATACAATCAGCTTCAAAATATGTTG
agaatttttggtattttaacgtttttcagggTTTAGAGTTCAGGCGAGGT
CTTTGTataccttatcggtagaaaTTTCGTCGGTGGAAAATTTCGTCGGC
AAAAAATATTCGTCGGCAAAAActttcgtcacttgctggttttggtaagc
gcattaaggccggggaaaatattcgtcggtAAAAACTTTCGTCACTAAGC
gattttttcgtcactttttaccgacgaaatttctaccgataaggtatTGA
TAATGTTATattataaatttgtttttttcagcATCCGGACATCTACGAAA
AAGCTATCATGAATCGGCCGAAAATGGCTTTCAATGATCAAGTACGTTTT
ATACGCAGAATTCGTTTTCTATAAAAACGTGACATTTGTTTTCATGATTG
AATTGTTTGAACTTTCATTGTCGCGTTCTTTTTTTTCGGATGtcaaattt
atgtttttaaaagcATAAAGGATAAAGAATAGAATAAGAAATGATCAAGT
CTTTTCGAACACTACCATATAAAGGATTTAAAGCCCTCAGCTCTTGAGGA
TGATTGATATTCTCCACCTCGTTCCTGCGACGATGTTTACTAAATAATAC
CTTTGCATTGTCTGGATCTCGAATAAATAAGATCACATAATCCAAAGCAA
AACGTCGCATTAGATTTTGTTCTTGGGCTTTAAAGACGTTGTATTGCCCC
CTCTCAAAGAACAACATATTCCTTGATACCATTAGTAACGTGAAAATTCA
GTTTGAGTATTCCTATTTCATATTCTATATAGTTTTCAaggaaaactttt
ttcgctgTATCTTGATTCCCTGTTTTGTAATACTTTAGATACATTTTCTA
TTAGGTCGATTTATGGAGCTTAGGAGTGACATTCTACCATCTGGCCACTG
GAAACTTACCTTTTTGCCCGTTCAAAGGAAGAAACGACAAAATAACGATG
TAAGATTTggtttttggttttcttttacTTTCAAGTCTCTGAAAATAGAG
GATTAAAAAGAATTCTGGCTAAAGTTCTTAAGGGGTGAAGAAGAGGGCTA
TTTAAAGAAAACTGCAGAACTTATATATTTTTGACACCTAACATTTGTTC
TTAATCTCGTAACTTATGTTCTTGTACGTTTAAAATTCTATATTGCAGGG
ACGAAATGATTACCAAAAAGAAACCTGGGGTCATATCATGTCATCAATTA
AAAGATAACGGCCCGTTGGAATATTCTAATGAACTGCCTATGGAATGTCG
AATGTCTAAAAGTTTGAAGAATCTAATTACACCGGTATTGAGCCGTTTAT
TGGAGACGGACGCCAAGCGCGTGATTCCTTATGAcgaatttttcaaagaa
atcaaaaggatTGTGAACAATAAGGTAATTTTGGCTCAGTTCCAATCCTC
TTTCTTATAACTCGAATGGTTACTGCGGAAGAGTTAGATCATCCtatgtt
tccagctcacccaaatagagacttaaacgcatgcgtaatttatcgttctt
taaacCGCTAGTTGTCAAATAGCGTAAAGTATgtacaaaaagtaatgaat
atgtAGGGATGGTCACTGACCAAGGTTGGGGTTTAGGACGGCGAAATATG
CCGCtatttgatagttagggttagggtttgtcgTTTGTTGTCGCTTTtca
atagttatttgtcgttcttttagatgatctggaaacgttagatgaacagt
ctcggAAATACCAATTTTTTAGAGATACAGACAGCTCGAATATTATTAAC
CTTTTCATTCAGCTTCTGCTAGTTCAATCCTCGAGAATGgcattgtattt
ttgaaaaaagcatgACGCTTTGAAGCTACCTCTAGCATCTAGCttaattt
ttcccattttttatgtatttttgtccattttcctaagaaattggctgttt
ttgagtccgcgaagccctaaaatgctcttaaccagtcttaacttgttctt
aacatcttaaacattttggccatcgaagccttatgttcttatatagtttg
ttcttataaaaaaaacgttaaaacctTAATAAAACTTTGGTTTATTGCAT
TGTCTATAAATATATTCTTAAGTTTCAAATGATCTCTAAATGAGCTAGAT
ACAATAAAATTAATCGTTTCGCTATTATGTGTTTTTCTTTCGGTTAGGTT
TTGCATGTCTACGTTAGCCGGACCAGTACTATTGACAAGATCTACATGCA
GCCGGACAAAACGTAAGCTACCTTAAGGAAAACCTTCTTGGCAAGCagca
aaaatgctaaaaattattttggtgACTGATGCATAATTTTATTTtggtga
gaactaattttgaccaACGACAGGGGGTAAATCAGTtcttttatgcttaa
aaatgaGTGTTTTCGCCGAGGTCAGTTTTCGCCAAAGTAAGTTACCTTGC
AGTCCCTTAAGGTATTTAGAAACACCTTTTCGTGATAATAATTTTGTAGT
CTTGTGCGTTTATTGGCGAGGTAGCTCGTTGTTgaagtttttcctgattt
ttcaaGAGTTCGCAACATTTCTCTGAAAGTGCTATGAAAGTCAGGTTATA
AGACTATACAGAAGTGTGAGTTTTAAATAAACATCCACGGGTTGACTTGA
GGCTCTGCTTTCTTCTGTGTAAATGTTAGGTTCGAATCAGATTCGCAGCG
TAGTAACTTATGTATTAACTTTCATCAGGTTATCACATCTTCAAGACACT
CTCGCTTTGGTGACTGGTATCAAAGAAAGTGATCAGGAACTTTTTCACAA
CTTCTCAGAATTCAAACCAGATTTCAACATGAAAATACATAACTATCCGA
CTTTTACGGTAAGAAAGAGAGGAACCTTGCCCCCCCCTTTTTGCTTACAc
agtatttttaaacaaaagaaagaataggctgctggcatccattAACCCAT
TAACGGATTCTGCTTTTTCAGCATTGAGGTGTCttttaaaaatctcaaaa
aagaatatctttcgACAAAACCAATTTTGatgatcaatatttttgttttt
tttaaacatttttcaattagatgagctggagtttttacaagatacttgac
taattggtcattttacagtaataaaaatgacgcgttctttagaaagagta
ataaaatcaatttattacaggttaacgaccaaccaaatcgaataagaact
tgtaaaaactccagcttgacccttTTAAATACTTCCATTATAGCAGAAAT
TACTACACAAAAATACTAAAGTAGGTCTAACAAAGGTCAAAACCTTTAAG
AGAGGAGCGAAAAATCTGAATTACATTATTATTCTGTTTTTCAGTTGGAC
AACCCGTTGTTTTTATTCAGTAAAGATCACTTGAAATCACAACAAATGGA
ACAGAACAAACTACTGATAGGTATATGAACctacacgttcttttataaga
acatccaaattttttgaaaccttaggatgatcttaactttttgagttttc
agcttaaaaatatcattaacatgttcttattttcaacactctgtgagcat
ttttgcccatttcttaagaaattggtcatttttgagtcagcaaagcctta
taatgttcttTATAGCATGATCTTATTTAATTTTAACAATTTGGCCATCA
GacccttatgttcttacatagtttgttcttataaaaaaattgtaccTCTT
TACAACAGGGGGTAGAGGGGTCTCTATTTAAGCATGTGTTATTGTGgtac
atttttcaaacaaatttttgcTAGTgttaaaagaagaaagaagttatTCC
ATTGTTCACAACTTTTCGTATTTCATGCAAGTTCTCTCCAACtttagttg
agctagaatctgagaatgtgtgtctgtctgtgtctccttaaaattttggg
gctgcctggagacttaaaaaatggtcggattttgctgaaatgtggttcac
ttttttcttgggtgaatatcggggggagggggtatttTTTATTCCCTAGG
CCTGGGCACTAATCGTTCGGTTTGTTTTGCTACAATTGCGCCTATAAATA
ATTTAAAGCTACTGAAGTTGTGCCCAGTGCAATGCGCACGTTTGACTACT
AATCTCAACCCAACAATAAAAGTAGAAAGTACTTAGGTGTAAAATGAATT
TCGTTCTTTCGACTTTTTAGGAAATGGTATTTACACAATCCACCTAccac
ctggtgctgtaagtTTAGTTAGGGTCTTCGTTGAATCCCATAATCTTAAG
TATTCTCAATCTACGGGCCTTTAAGTGTTTTGTAAGCATCCAAACTTACA
TATTATGAACAGCAAGAGGTTGTTTTTTTGTAAGTTGTTTCTGAATCTGA
TTTTCATAAcataaaagataattttttcgtGATTTCTTCATCTTTACTTC
TAGcaaattctgaaaaaatcttGTAAACTGCAAAGAAAATCAGAGAAGTT
GGCACACGAATGCAAAGCTATTTTGAACGCCAGAAGTTGTTTAAAGTAAG
ACAGATTTTGAGTGGGAACTAGTCTATTGACTCACTTTATAAGAACGATT
TTGTAAGATCAATGAGGGTCAAGGCAGGTCAAGGAAGCTGAAAAATAAGA
ACTTAATTAAAGAACCAACCTTAGCCATACTAAGAGAAGTTTTCGGCTTA
AAATACCAAATATGGCTCTATACTAAAAATAGTGTATTTTCCTGATCTTT
AATAGCAGAAGTTTGGTAAATCATTTAGATGCAAACACATCATTTTTCTT
CCTCTTGGTATTTTGATAAATCCTGGATTTAGGAATCTCATTATCCTTTT
CAGAATGGCAACccaaaaagtctttgaaagcATTACATGCAATTGCGAAC
ATATTGAAGATAAGATCAAAATCAAATACCAAAGTTTAGAAaagtaagta
tttttttaaactgtGTCTTCTTCATTTGAATAGAACACCATTATTTCAGA
GTTTGGCAAATATCTGGGCTTATTTTTGCAGTTTTCTTCAGAACCTTGCA
TTCTCCGTGATTTCATATTCTGCTGAAGTCTGATTTTAATCTCCACGGCC
ATCGCGAGAGTTTGCGGATATCATGCTGTACATCGCATTATGGTTATGGG
TATGTTTCTTTGCGGCGGTGGACTCTTCATAGGCTCGAGTGAAGCGCGGA
GTATGCAAAATTTGCAGGAATCTCTATAATAATTTAATCGAATTCTTTGT
CCGAGTGTTATTTCATCATCGAGGAAACTTTAAACGGAAGTTGTATTGAC
CTTGCATTTTCTCATCGTCGCGAATCTAAACCATAAGTGGTGGTCTTTAA
CACTGCAAAAATCAAACCTAGCCTgaatctaaataaaaaaaagagtcaaa
aacctgatgttaatttttttttttagttataAGAAAGTCTTGAGCAGAAT
ATCAAAATCAGCCGATGGTAAGTTTGGAACATAACTTCAGTTCTCCAAGC
ATTGGAATTACTTCGTTTTAAACTTGTCCAGCAGTGTTGTAACTTTTTCT
TGTGTGGTCGTGAATCCCTCCAGTGGAAATACAGTATTTTTGTCTTGCTT
GTCTTGGAGTTTCTGATCCttaatcaaaaatgatttatctAAACTACAGG
TTTATCATGATTTTCAACCAGATTCATAAAAACTGGTTCAGGTAGAACCT
GAACATTGCTGGACATTCTCGCCTTGTTTTTTGTCTTACGCTAATAGCCA
TAGCAAGACTACAGTCTTCTAAgtagtttttttctttctttagagCTGGA
CAAGATAAAGAAGGCGGAAGCTCTGGTATagatttaattgtttttatgtT
TGTATTGGAGATGTTCATTTCAATATCGTTAGAATTTAACAGGAGTGGAA
TCTTCCTAGAACTCAAACAATCCTGCTGACCGCTGTTGCTTGTCCGGAAA
AAAATAAACAGGAGTGGAATCTTCCTAGAACTCAAACAATCCTGCTGACC
GCTGTTGCTTGTCCggaaaaaaataaacagaatTTATTTAATGATTTATA
AATGCCATCGGTTATTGTGCAATTGTCCTGGTGGCAATTGTCTGGGGGTA
ATTGTCACGGGGGCAATTGTCCTGTCACCTTATAACCTAGTTACtcgatt
tctttttcaaaattcaaattaccTTGGggcaacggattagaataggtgga
ttaacttctctcgttgctcccaagagagatccattgtcttctcattgtta
caagaaaaatctgtaaatgactctgcgcactCCTCNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAgtgcattttcttatttaaa
atgtaccacgtgatacgtaatgaccaatgaaaatgttgaaagtaatgatt
ttttacaacttttttacaaCTTATCAAGTTGTAATTGCTAGCataaactc
gtaaaaaagtttgataacctaacgaggagtgttttctatgagttcttaat
ccacctattctaatccgttgcttGGGGTCTTTACGAATTGATTATCTAAT
Gattaaacaagaagcccgttgggcgtgaaggcccagcgaaaagtaacgtg
ttgaaatcGAGCGTACAAAACAGCAAATGAatgaccccgttgacatggat
caaagtgaagacaggaaattttttttcaaaatagccgcggtacttctcat
tggttatacgcttgaaattttattgaatggtccCCTACCAACCGGGACTA
CACAGGCGAATAAGGCTCATCCGGTTGAATACTCtcctcgggtacctaat
agctgggggNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNAgggaaaaaatagctaaaatgaggaat
ttctcagggaaaaaacctttgaaaattgattaaaattcagggaaactctg
ggaattttattttcgaaggtctgtctgaaccctgcagcagccattttgtt
tagaaatgaacctgtgttttcattttcattcgtttatcttttttcacaag
gtcagctttttccctAAATTATGCGCACCCatagaaaaactggaaaaata
taaaaaaatcccgCAAATATTCTCCTTAAtgagtgggcgctttttaatga
ataaGGTGCACTCACCTGCAATCACATATGtagggagaaatatccctgca
ggcatgttagttggaccagaccgtaaaccagaaaaataatctttaaaaaa
ctagacggtgaaatagtttacggtctgcataNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNTAatgtgacagatccagaaatgacca
ttttcactgttcatgaattgcaaccatgaaaaatgttccaatctagttca
aatttacccatgagctgcatttttaagtgtccattaacagattccagaat
cagtttatatacTTTAAATAATAATGTGATcgatgtgagtcgagtttgaa
accGACCGACCGttttaatgcgacagatccagaaatgaccattttattta
atgtgtagaatcatgaaaaaattcCCANNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNttacaaaatttctttggtttgaaaatctcttgaccactaaagca
aagaaaatgttcaagaaagtatgaatcaacctcctctcttcgaccgccat
cttgttttgttttgaaaattgttttgaaaaagcgcggaatcagaaaatat
atcttttatagccagtatccgactttagcaagcttttccctatccagacg
gcaaaaagtgtAGTACTGggtttaagcgccgtttctaccaaaacggacgg
acagacacacGTACGAACAGaacgttgcaaatgaaaggcccactcgctTA
GCGCAGggccaataaaaaaatttcattgtattgaaaatataattaaCTCT
AGTGACATTTGAGgatttcagttaaattaaatTCTGATCTGCTTTTTTCT
CGTACAGGGAACATTATGTATCGAGCACTCACAGAGACATCGCAAATTTG
TTTGAGGGAGTAGCTTAAAAGAAATTGTCGAGGGTCTattgtcaaaaatc
aaaaacaaagttatttccatttttttgataGTACCAACAAGGTTTGGCAG
CCCTGGCGACGCTGAAAGATAAAATCAAGAACATATTGAAAAGTGATACG
CTAGATGCAACATTTTTGAAAGCTACGGAAGAAGTCAGCGATCTACCTAG
GTATGTTAATCCTCCGACCTTGAAATCTGTGTTAGATGTCTGAAATGTAT
TATTCtcgaatcttaaaattttaggaTAATTATAAAGCCCTTCAATTTAA
ATCTGTACATATTTGTTCTGTTTTGGATTCAATCATTCCACCTGGGTAAC
ACCCTTATCTACCTACTGGAATCTGATAGTGAGGTATACAATCATACCCC
TGCCGTAAGTTGGTCAACATCCCTTCTCTAATTTCGAGACAATTCTTTAG
AGTTAGGAATAAGAGGGCAGTCGGAACCACTGTAaaatttctttgcttag
caatcagagaggaaaaatcttttttctatcaTTGATTCCGACGTTCCttt
tattcctatctctaaagaggGGTGTCGGTTTTAGAAGAGGGATTTTGACA
TCAGACCAACTTACGGTCTACCTCAGTCTTatgtttttgtcaaattttgt
gaaaaagtgaCCTGACCTTggattgaaattcaaaaaaatttgaccttttc
cgactttttttcaaataaccCTTCGAACATCTAGGGGAAGCATCGTGAGG
GACTGGTCTATAAAATACACGTTGACCTCCCTACCAGAACTCCTGGAGAT
TTTCACTTTAATTTTCACCAGTGGTAGATATTGAACATCTAagacagtgt
gcaaaatttcagttcTATCACGTGCGTGGTtgttattttacagaccggtc
cgtATTTTACCTAAAATCCTCACTTATGGCTGTGACCTTCATACCTCACG
CTTGCCAAAATGTCAAGTCAATAGCAGTCAATTTCCGATCCTTAGATACA
TTAATCCATGGTGTATAAATAGGCAAAAAAAGGGcaagttttggccattt
ttcaaTGATGACGTCCTTAGGtggcgatgacgtcatcaatgatgccgaaa
tttttatttcacattttaattcataaaaattttcaagtcaataggataaa
aatttcaaaagttatctAACATTTTCTTTTGAAGGGGGCCtctttgcccc
cccccccccccaccNCCAagttttggtcatttttcaatgatttttatttc
acattttaattcataaaaattttcaagtcaaaagttATTATCTAACACTT
TCTTTTGAAGGGGGCCTATCTGCCCCTCCCCCCCTCCCCGCAAGATATAC
TAAGGGTTAACAAACgtaattttttaagaattttgtctttgaaggctttt
tttaaTATTCTGATTGTTTTTCACTCATTTTGTAGTCCATTGGAGCTGAC
GAGTTGTGTGAAAATCATCTATGATCTCGGCATGCGAATCAGTAGAGAAA
AGTCTCGA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_015040XLOC_015040Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00026765-exon-sc0000587-1491911889:74428..74657TCONS_00026765-exon-sc0000587-1491911889:74428..74657Clytia hemisphaericaexon
TCONS_00026765-exon-sc0000587-1510915933:74428..74657TCONS_00026765-exon-sc0000587-1510915933:74428..74657Clytia hemisphaericaexon
TCONS_00026765-exon-sc0000587-1575043694:74428..74657TCONS_00026765-exon-sc0000587-1575043694:74428..74657Clytia hemisphaericaexon
TCONS_00026765-exon-sc0000587-1491911889:75595..75738TCONS_00026765-exon-sc0000587-1491911889:75595..75738Clytia hemisphaericaexon
TCONS_00026765-exon-sc0000587-1510915933:75595..75738TCONS_00026765-exon-sc0000587-1510915933:75595..75738Clytia hemisphaericaexon
TCONS_00026765-exon-sc0000587-1575043694:75595..75738TCONS_00026765-exon-sc0000587-1575043694:75595..75738Clytia hemisphaericaexon
TCONS_00026765-exon-sc0000587-1491911889:76222..76354TCONS_00026765-exon-sc0000587-1491911889:76222..76354Clytia hemisphaericaexon
TCONS_00026765-exon-sc0000587-1510915933:76222..76354TCONS_00026765-exon-sc0000587-1510915933:76222..76354Clytia hemisphaericaexon
TCONS_00026765-exon-sc0000587-1575043694:76222..76354TCONS_00026765-exon-sc0000587-1575043694:76222..76354Clytia hemisphaericaexon
TCONS_00026765-exon-sc0000587-1491911889:77537..77630TCONS_00026765-exon-sc0000587-1491911889:77537..77630Clytia hemisphaericaexon
TCONS_00026765-exon-sc0000587-1510915933:77537..77630TCONS_00026765-exon-sc0000587-1510915933:77537..77630Clytia hemisphaericaexon
TCONS_00026765-exon-sc0000587-1575043694:77537..77630TCONS_00026765-exon-sc0000587-1575043694:77537..77630Clytia hemisphaericaexon
TCONS_00026765-exon-sc0000587-1491911889:78192..78282TCONS_00026765-exon-sc0000587-1491911889:78192..78282Clytia hemisphaericaexon
TCONS_00026765-exon-sc0000587-1510915933:78192..78282TCONS_00026765-exon-sc0000587-1510915933:78192..78282Clytia hemisphaericaexon
TCONS_00026765-exon-sc0000587-1575043694:78192..78282TCONS_00026765-exon-sc0000587-1575043694:78192..78282Clytia hemisphaericaexon
TCONS_00026765-exon-sc0000587-1491911889:78659..78718TCONS_00026765-exon-sc0000587-1491911889:78659..78718Clytia hemisphaericaexon
TCONS_00026765-exon-sc0000587-1510915933:78659..78718TCONS_00026765-exon-sc0000587-1510915933:78659..78718Clytia hemisphaericaexon
TCONS_00026765-exon-sc0000587-1575043694:78659..78718TCONS_00026765-exon-sc0000587-1575043694:78659..78718Clytia hemisphaericaexon
TCONS_00026765-exon-sc0000587-1491911889:79232..79326TCONS_00026765-exon-sc0000587-1491911889:79232..79326Clytia hemisphaericaexon
TCONS_00026765-exon-sc0000587-1510915933:79232..79326TCONS_00026765-exon-sc0000587-1510915933:79232..79326Clytia hemisphaericaexon
TCONS_00026765-exon-sc0000587-1575043694:79232..79326TCONS_00026765-exon-sc0000587-1575043694:79232..79326Clytia hemisphaericaexon
TCONS_00026765-exon-sc0000587-1491911889:79526..79751TCONS_00026765-exon-sc0000587-1491911889:79526..79751Clytia hemisphaericaexon
TCONS_00026765-exon-sc0000587-1510915933:79526..79751TCONS_00026765-exon-sc0000587-1510915933:79526..79751Clytia hemisphaericaexon
TCONS_00026765-exon-sc0000587-1575043694:79526..79751TCONS_00026765-exon-sc0000587-1575043694:79526..79751Clytia hemisphaericaexon
TCONS_00026765-exon-sc0000587-1491911889:80525..80589TCONS_00026765-exon-sc0000587-1491911889:80525..80589Clytia hemisphaericaexon
TCONS_00026765-exon-sc0000587-1510915933:80525..80589TCONS_00026765-exon-sc0000587-1510915933:80525..80589Clytia hemisphaericaexon
TCONS_00026765-exon-sc0000587-1575043694:80525..80589TCONS_00026765-exon-sc0000587-1575043694:80525..80589Clytia hemisphaericaexon
TCONS_00026765-exon-sc0000587-1491911889:81056..81185TCONS_00026765-exon-sc0000587-1491911889:81056..81185Clytia hemisphaericaexon
TCONS_00026765-exon-sc0000587-1510915933:81056..81185TCONS_00026765-exon-sc0000587-1510915933:81056..81185Clytia hemisphaericaexon
TCONS_00026765-exon-sc0000587-1575043694:81056..81185TCONS_00026765-exon-sc0000587-1575043694:81056..81185Clytia hemisphaericaexon
TCONS_00026765-exon-sc0000587-1491911889:81672..81747TCONS_00026765-exon-sc0000587-1491911889:81672..81747Clytia hemisphaericaexon
TCONS_00026765-exon-sc0000587-1510915933:81672..81747TCONS_00026765-exon-sc0000587-1510915933:81672..81747Clytia hemisphaericaexon
TCONS_00026765-exon-sc0000587-1575043694:81672..81747TCONS_00026765-exon-sc0000587-1575043694:81672..81747Clytia hemisphaericaexon
TCONS_00026765-exon-sc0000587-1491911889:82498..82535TCONS_00026765-exon-sc0000587-1491911889:82498..82535Clytia hemisphaericaexon
TCONS_00026765-exon-sc0000587-1510915933:82498..82535TCONS_00026765-exon-sc0000587-1510915933:82498..82535Clytia hemisphaericaexon
TCONS_00026765-exon-sc0000587-1575043694:82498..82535TCONS_00026765-exon-sc0000587-1575043694:82498..82535Clytia hemisphaericaexon
TCONS_00026765-exon-sc0000587-1491911889:82731..82822TCONS_00026765-exon-sc0000587-1491911889:82731..82822Clytia hemisphaericaexon
TCONS_00026765-exon-sc0000587-1510915933:82731..82822TCONS_00026765-exon-sc0000587-1510915933:82731..82822Clytia hemisphaericaexon
TCONS_00026765-exon-sc0000587-1575043694:82731..82822TCONS_00026765-exon-sc0000587-1575043694:82731..82822Clytia hemisphaericaexon
TCONS_00026765-exon-sc0000587-1491911889:83131..83220TCONS_00026765-exon-sc0000587-1491911889:83131..83220Clytia hemisphaericaexon
TCONS_00026765-exon-sc0000587-1510915933:83131..83220TCONS_00026765-exon-sc0000587-1510915933:83131..83220Clytia hemisphaericaexon
TCONS_00026765-exon-sc0000587-1575043694:83131..83220TCONS_00026765-exon-sc0000587-1575043694:83131..83220Clytia hemisphaericaexon
TCONS_00026765-exon-sc0000587-1491911889:83704..84102TCONS_00026765-exon-sc0000587-1491911889:83704..84102Clytia hemisphaericaexon
TCONS_00026765-exon-sc0000587-1510915933:83704..84102TCONS_00026765-exon-sc0000587-1510915933:83704..84102Clytia hemisphaericaexon
TCONS_00026765-exon-sc0000587-1575043694:83704..84102TCONS_00026765-exon-sc0000587-1575043694:83704..84102Clytia hemisphaericaexon
TCONS_00026765-exon-sc0000587-1491911889:89109..89227TCONS_00026765-exon-sc0000587-1491911889:89109..89227Clytia hemisphaericaexon
TCONS_00026765-exon-sc0000587-1510915933:89109..89227TCONS_00026765-exon-sc0000587-1510915933:89109..89227Clytia hemisphaericaexon
TCONS_00026765-exon-sc0000587-1575043694:89109..89227TCONS_00026765-exon-sc0000587-1575043694:89109..89227Clytia hemisphaericaexon
TCONS_00026765-exon-sc0000587-1491911889:90463..90535TCONS_00026765-exon-sc0000587-1491911889:90463..90535Clytia hemisphaericaexon
TCONS_00026765-exon-sc0000587-1510915933:90463..90535TCONS_00026765-exon-sc0000587-1510915933:90463..90535Clytia hemisphaericaexon
TCONS_00026765-exon-sc0000587-1575043694:90463..90535TCONS_00026765-exon-sc0000587-1575043694:90463..90535Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000587supercontigsc0000587:74428..90535 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.889621	1.28964	0.276237	0.870449	0.613926	4.36484e-09	6.57778e-05	0	0	0	0.473122	0.721819	0.950091	0	0	0.562829	0.220941	0.295527	0.70097	1.69925e-08	0.25342	0.198908	0.000302137	0	0.970671	0.00223646	0.373109	0	0	0
Blast
[Close]
BLAST of TCONS_00026765 vs. Swiss-Prot (Human)
Match: TBK1 (Serine/threonine-protein kinase TBK1 OS=Homo sapiens GN=TBK1 PE=1 SV=1)

HSP 1 Score: 298.901 bits (764), Expect = 1.365e-89
Identity = 159/394 (40.36%), Postives = 244/394 (61.93%), Query Frame = 3 
Query:  141 LRHTEKYVWNVEYDFLGNGATSIVYKCRKKQDGRHYAAKVMNKRSQGRRNDIMEREIHILQQLKHPNIVQFIDLEYTTSQNGERNAVIVMELCG-ESLHTKLTHPDNAFGLEEETFKSAVYDISLGMEYLRNQKIIHRDLKPGNILCVPNIENGSTTYKISDFGAARFLEDGGEFTSIFGTEEYLHPDIYEKAIMNRP-KMAFNDQVDLWSLGVTFYHLATGNLPFCPFKG-RNDKITMDEMITKKKPGVISCHQLKDNGPLEYSNELPMECRMSKSLKNLITPVLSRLLETDAKRVIPYDEFFKEIKRIVNNKVLHVYVSRTSTIDKIYMQPDKTLSHLQDTLALVTGIKESDQELFHNFSEFKPDFNMKIHNYPTFTLDNPLFLFSKDHLKS 1313
            ++ T  ++W +  D LG GAT+ V++ R K+ G  +A KV N  S  R  D+  RE  +L++L H NIV+   +E  T+    R+ V++ME C   SL+T L  P NA+GL E  F   + D+  GM +LR   I+HRD+KPGNI+ V   E+G + YK++DFGAAR LED  +F S++GTEEYLHPD+YE+A++ +  +  +   VDLWS+GVTFYH ATG+LPF PF+G R +K  M ++IT K  G IS  Q  +NGP+++S ++P+ C +S+ L+ L+TPVL+ +LE D ++   +D+FF E   I++  V+HV+  +  T  KIY+    T +   + +   T I  S+QEL +       +      ++P  T +NP+F+ S++ L +
Sbjct:    1 MQSTSNHLWLLS-DILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTT---RHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLRENGIVHRDIKPGNIMRVIG-EDGQSVYKLTDFGAARELEDDEQFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMYKIITGKPSGAISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAETSDILHRMVIHVFSLQQMTAHKIYIHSYNTATIFHELVYKQTKIISSNQELIYEGRRLVLEPGRLAQHFPKTTEENPIFVVSREPLNT 389
The following BLAST results are available for this feature:
BLAST of TCONS_00026765 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
TBK11.365e-8940.36Serine/threonine-protein kinase TBK1 OS=Homo sapie... [more]
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