TCONS_00026764 (transcript) - C. hemisphaerica

Overview
NameTCONS_00026764
Unique NameTCONS_00026764
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1731

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00026764 ID=TCONS_00026764|Name=TCONS_00026764|organism=Clytia hemisphaerica|type=transcript|length=1731bp
AAAGAAACCCTTCATGTTTAAGCTTTTCGTGAATGTGGTGAACAGGTGAA
GTTAATGAAGAAAACTTCAATTTAAAGATTAGACATGGATTTTTCACTCA
ATATGGACGCACTAAAAGAGAGAAAGGAGACCCCAGAAGTCTTCAGTGAT
ACCTTTGTTCAGAGTAAAGTATCACTCAGGCTAGGATTTATTCGAAAGGT
CTATGGGATACTTTCGGCACAACTTCTTTTGACAACTGCTGTTGGTGGAT
TGTTTATGTACAATGAATCAGCAAAAGCATTTGTTCAGTCCAGtCCGAAT
CTACTGTACCTTGGTTGTTTTGCTTCCTTCGGACTTATCATTGCATTACA
TATATACAAGAATCAAACACCGatcaatttttatttactttttgcaTTTA
CATTGGTTGAAGCATATACTGTAGGATTCATTGtaacCCTATATGATTCG
GCGGTTGTCCTTCAAGCCTTTGGGCTTACAATGGCTACAGTCATTGCCTT
GACTGTATACACTTTCCAATCCAAACGTGATTTCAGCTCATGGGGAGCAG
GACTTTTCTCAATGTTATGGATCTTGATTTTATGCAGTTTCATGACAATG
TTTTTCCAAGTTGAGGCTGTTCAGACAGTCATGGCTGGAGTTGGGGCATT
GTTGTTTGCTGGTTTCATCATCTTTGATACTCACATGTTAATGGAGAAGC
TCTCACCAGAAGAATATATCATTGGTGCTATCAATCTCTATCTTGATATT
CTTAACCTGTTCTTGGAGATTTTGAAATTAATGGCTAAGAATAATAAGAA
TTAAAACCATTTAATATTCAACCATATTCCAGCCCCAGCAGAATCACCAT
AAAGTGAGGAGGCTGAAGTTTCCCCATTCTCACTGCTTCCGTCGGgcctt
tattcatgatatgaaccattgcaatgtcttctacggacgctacagctgat
tggttgaaagtgacgtatttgctgtttttacgtcacttacgaccaatcag
ctgttgggtccgtgatataatgtcggaagacattgcaatggtgcatatca
tgaattctttaGCTTCCTTATGAAGTCTAGAATCGCTGACATACAACTta
agaaaatttattgttttttttaataaccaTCTAAAGACACCTGCAGTACA
CTTTAATTCATGCGCCTAATATTACACAATTTGCAATAATTTCCAGGTTT
CTTGATTTATGCTGGTTCATTGATTTTAGCACTTCATAGTGGTAGAGAta
gaattttcaaatattcaaatatatTAGACCAAATTTTCTACTAAATGTAC
TAAAGTTACTGACTTTTAAGATCACAACATTGTTATTTGAAGCTGTGCTA
CTGCAGGTTTCATACTTTTATTTGATGTATGAATTAAAAGATATTTGGAA
AAATTGCTTGTTTGTTATTACAAGATTAAATTTAGTCATTAGTACACGTT
TCGATAGCAGATCAGCTGAAAGAAAGAACCTTCTTTTGTAGTGATTGCGC
TCTAAAATGTTTCTATTACTTTGAAATTATActtttaaaatatcattttt
ctaaaacaaatTTATACATACTTTTATTGTGTCTTTGAGGGTGTATATTT
AGTTTAATTTTATTTCTAAAtctattttctttaattttattGAGTCTTGT
AATATAGTTTAATTATTTGGGACATTTTTTAATCTCCTTTTCTGCTATGG
GCAAACCGTTTTAACTTCAGGTTAAGTTAGC
Run BLAST on NCBI

protein sequence of TCONS_00026764-protein

>TCONS_00026764-protein ID=TCONS_00026764-protein|Name=TCONS_00026764-protein|organism=Clytia hemisphaerica|type=polypeptide|length=239bp
MDFSLNMDALKERKETPEVFSDTFVQSKVSLRLGFIRKVYGILSAQLLLT
TAVGGLFMYNESAKAFVQSSPNLLYLGCFASFGLIIALHIYKNQTPINFY
LLFAFTLVEAYTVGFIVTLYDSAVVLQAFGLTMATVIALTVYTFQSKRDF
SSWGAGLFSMLWILILCSFMTMFFQVEAVQTVMAGVGALLFAGFIIFDTH
MLMEKLSPEEYIIGAINLYLDILNLFLEILKLMAKNNKN
Run BLAST on NCBI

transcript from alignment at sc0000587:59063..74181+

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00026764 ID=TCONS_00026764|Name=TCONS_00026764|organism=Clytia hemisphaerica|type=transcript|length=15119bp|location=Sequence derived from alignment at sc0000587:59063..74181+ (Clytia hemisphaerica)
AAAGAAACCCTTCATGTTTAAGGTAGGCTTTTCGGTCAGTAAATTTGAta
ggtaaaaaaaacaaacaggaatGCCCAccagtttttttttctgcaaactt
TCACTTTTCAGCTTTTCGTGAATGTGGTGAACAGGTGAAGTTAATGAAGA
AAACTTCAATTTAAAGATTAGACATGGATTTTTCACTCAATATGGACGCA
CTAAAAGAGAGAAAGGAGACCCCAGAAGTCTTCAGTGATACCTTTGTTCA
GAGTAAAGTATCACTCAGGCTAGGTAAGGTCtctgattttattttcatat
cgtcatttccagacgatctcaatcgaacggaatcgacgatcgaaccagtc
gaaccaaatcgaacgcaatcgaccgattgaaattcgattgtcgaacgcag
tcaaatctcaatcgaatattatcGCATtattcagattcgattgatattcg
attgcgttcgattgatgttcgattgcgtttgattgcgttcgatcatcgat
tcattgacccccggcttgttcatcgcataatttctatgggaaatcgaaag
taatttcatttggcttgtgatgtttgagagcttggatgttgggaagctgc
aagatcaagaataaagccagacgatctcaatcaaacggaatcgacgatcg
aaccagtcgaacaataATCGAtccaattgaatattacccagaattttgac
gttcgattgagattcgattgcgttcgacaatcgaatttcaatcggtcgat
tgcgttggatttggttcgactggttcgatcgttgattccgttcgaATGAG
ATCGTCGGGTCTTTTAGGTTACTCTCCGAGTCCACTGGTTCTCTGAACTA
TTCTTCGTGTGTTTCCCTTCCGTTTTCTCATTCACTGACTACTATCGTAG
GATGGTCTAATATCGAAatgcgtcttctaatttcgacatagctgtaggct
ggtcttcgaaataaaaaatcaaacataaacaaatacataccaaagttatc
aatcaatcatcaaattgtactctccctatcacgtcacagattgttaatat
aatatgagaaatgtgaagtgttattacttatatttgaaaagaaaacttta
acgatatagtaatcactaaaaaactaattagcatgctttcaacgaaaaGA
TACCCtaatcacaacaacattttgcatgCGTCATTGAAGAAGCAAAAACA
TTATCCTTAATCCTTTGCTTGCAgctcctgtagccagtagtgtgaccccc
tgtattatTCATCAAAGTAAATGAGAGAAGAGAGGAAAAAACCTTAAAAT
CAACCAGAATTTACAACATTTTTTCCAAAGCAAAAAGACGTACTTTTctt
gccgccatcttgaatttaaaatgagaatTATATTCAGCCCCAGTTCacac
aataattttttcatccaatcagatcgtgCGATTTCACCTTcactttctct
agtccaataagacacgCGATTTGACTCACGTGACTCAAATCGCcgtgtct
tattggactagagaaagcgaaagtgacataaattcaagatggcggcgaga
aaagtgGTATCTCTAATTGAAAAACCACGAGGGAgaatagactttttttt
aaagaggcagccatgttgaataattatgtactccagcataaaaacaatga
tacagccatgcataatttttagaatatgcatgatacagtaattatgcatg
gctgtataattgtttttatgctggagtacataattattcaatatggctgc
ctctttaacaaaaggtctattaaaatgaataatacagggggtcacactac
tggctacaggagcTGCAAGCAAAGGATTAAGGCTAATGTTTTTgcttttc
tgaaggacaaaaggtataggaaggtTCATTAAAAGTGGAATAAAGCTGGG
ACTATATTATACGTTTTTCCGACTTTCCGACtcaaaaaagttggaaaatt
aggaaaaatcaTCAGCCGGTCGGACTAcgcgaacacaagttatttgcgAT
GCCCACCTTAAAAgataaactttatttttcatgatttcggacgggacacg
gTACAGATTTAGCGCAAATCGCCCTACTTTACTTATTTTCATCAGTACAT
AGTATTATTAGTACATAACTTGAGCTAACATTTTATTTGCATCGTCAAAA
GAGACATGTACATATTTTATCTGTCACCCTGTATATATTCAACAGTAAAG
TATAAACCGGTAAATAcatttatctatctatctatctatcatgTCAACCc
agttttcagagcatgtcatgGTTGTCcccaagaaaaattttcaacataaa
aCTCTGCCCCTAAGATCTCTTTCCCACCACAAAAAAAGCCAGAAAAACAG
GTAAATATAGCcagttttcaatgattttgccCCTGAACTGTagatattat
atcaaaatttgCCCTCGAAGATCTCGATGATTTCTGCCATACTCTGAAAA
CTGGCGGTCAACTGCTCTAACATCTAAACTTTGGAGAATTGGTCGAAaaa
tgggactgttgatatctggcctgtattttcacaacaaatttgttttgata
actcccaCCAAGTTTAttaatcatactttctgtcataacatatCACGAAA
AGTTTCACTGATagtgcgccctttttaactgTTTGTTTTCATTCGTAATG
ACCAGACACCGATTGGaaaattagagaacgcccgccccctaaccacctat
cgcCCAATgggatagaccttttttcaaagaggccaccctgttgaataatt
atgtagtccagcagagtccagcagaaaaacaatgataaaaccatgcataa
ttattacaatatgcatgatacagtaattatgcatggctctatcattcttt
ttatggctggactacataattattcaacaggacgtcctctttgaaaaaag
ttctgttaacaaataacgagtgtgtaacttgtcgagcgagtgacgtcaaa
tgcGAAAGATTTttaataccgtgagtggtcctaaatccgacagccctgtc
taaatccgacccccaaatgactgctatgaaaaaaaattctatgtttacaa
agaTTCCCTCTCcaagcagttagtcacactagctagccattccgggtttg
cttgttttttatttgacgctcatgaaaatcttcaattttagatctaactt
tgacaagcaattgttcttttTGTAGTTGAGCTATAAaattaattattttt
gagtaatttagagctttcttttagctttccaaccatatataatatgcagg
tgtaatattctacacttttgtctaaaaatttgttccaactaaaggccatt
tttagaaaaattagatctgcgggacacaaaaaaattcacaactcatcttt
gatttcaaacagCTGcagaggaaaaaatgttcagacagtgaaactttcca
tatttatcagaaaatacctgagaaatccaatggtgctactctctgaaatt
aattctttcattaaagttattattttttacttttcgtactttggcaagca
ttttcagcctgaaaatgaggactagaattataTAGAGACTGGNTTATCAG
AAAATGcctgagaaatccaatggtgcCACTCTCTGAAAtgaattctttca
ttaaagttattattttttacttttcatactttggcaagcattttcagcct
gaaaatgaggactagaattataaAGACTggtaccactgaaaaatttgacc
cttttttagcctaacacagttatttatatgccatggggaatttttcctcc
acagcgctttgattacaaagataggtaggttcatcaattttaacttccgc
tttataacgtttttattgttttttgcaatgcaatgtcttctttttcaaaa
aaatgtcttgtcatttattccttgaagtgttagcaagtcattacaaaaag
aattcgataaaagtctgcagtcaaaatgaagatatctggatttttttact
tggatattttgaaatttgaaaaaccatcaaaaagtgtatattttggtgcc
attttttatgccatttctgggctaaattgtcaacctcaaatgtctaaaaa
ggtgctattttagcggaaccaaaatctcaatatctctggaaccgcttatc
attaggaggtgtatgacccctcattttttttcttttttgaagctctacaa
gatgagTTAGTTTTGATTGCCACcaaaatagtttcaatttgaccctttga
atgcgtatcaaagattaatgcagtgaaagcgctatatcgtttacttgact
ctcaagcaaaaaaatgcgccgcaaaacttctaaagggattcatgaaaaaa
taacctggcgctttttaatgaaagtaacattttcaaaaactatgagaagt
tgcctaaaatttgggccatagatgaaaaagtttgagccaagccaaccttg
aaaactaatttcaagatcaacttcccaagaaaaagatctacgaggaggac
ggaacccacctagatccgtgcaccgccggataggctctttcccagaaatt
ttgccggacatcaaacaatgacccatttacatgtgcggaattatttttac
ttcagcgtataaacaaggccttaaaaatcgaagcgctgtctcggggaatt
gaatgacaatttggttggttgatattctggctgctGCATGTTTGCAatct
gtcattttgtctcattttaagttttcaagttttgattgattgtcttggga
tcttgaaattgattcaggtaactctcatccttgttgttgcaaatacatcc
tgtagatgactgatgttttttttttgaaagcttgatttcctagtgtgact
aactgccaagttgaaaaataaactatattgcaagaactcttgaaacaaaa
catctaacaagatgactaaaatgtcaagatgtcaattaatgtgaaaaaag
ttgtaaaagtaattacctctattattctgaattcgttgcttgtgtttaaa
acgttaacaattttgtaataaaaaaatatgttttgtataTATGTGACTTC
CCAAGCAATTTAAACTACCTGAAAATCAGTCCGGTCTTGGTCCAGTATTA
TGAGTGTCCCAGTAgcggtcaaatttttgttttagatcgACCTTCAGACC
TTCTAGAAATGTGATCTCTAACAGTCCTGACCACTTCTAGACGCTCGTGG
CCGCTCATTAGACCAGTCCTGACCACTTGTTAGACCGATCCAGGCCGCTT
GTTAGTGATTTTTAGGACAATTacatcaaaaaattcttgaaaaaagaaGT
TGACTAGACAATCGGGTCGGTCTGGGACTCCAGGCTTTGCAGCAGCAGCT
AAATTTACTAAACTCATTGCGGCCTATTGGTAAATTTTTATCAGTCATTT
ATCGGCCCTTAAAAGAGACCGTCTACTCCTTTGTAGAGGCAAAAACtgcg
aaaacctctttagaagagtttcggagtttcttaagtaaacattccaatca
gagggatttccccagacatgatatttacttttcaaatccgaacgaaagag
aaaacatttgaATCATAAAACTGAGGTTTTTCCTCAgcataaataaaaga
aaatgcaacagatcagaaagatttccccttctttctttctcaaaaaaggt
aaacacacaaacatttgaatgtaaaaagattcgaagtctattttctttga
tctagttTTCGCgtaagagggaaaacccgtCGAAATTTATTATCAATATT
GTtcgttcgaaaagatctctgagaaaacccagaataaagatcttgctata
aaatatacgttttcgagttagaaaagtaatatacagAGGagatattttgg
tgtttttttctacacacgttctgtaaaatacaactatgaaaatcaaaatg
gcgacaagcatttccAGTGGATCATGGAATTTCTttatcatccaaaattc
aaatttacagctttctaccctttaatTTCTGGTAGTATATAAAtggtata
tatatttttttgaaagtattatctttcaaattctgcTTATTgcggggggg
cgtacgggatatCAATCGGTACATCAGTATTAACCTTTATTTAGATCAGT
AAATCGGTATTAGAGGAAAAAATTGATCGGTAATCGGTATTTTAAGACCA
TCTCGGTACCGGTAAAAGACCCTTTTttatgtcggtatttcggtattttt
ggTCAACTATCAGTATCAACCACCTCCTTGGTATCAAAGATCATGAGCCA
TTGCGCTCCAAAACCAATTTTGGtggaataaattttaaaatcttgcaatt
tttttcgctcgcttcgctcgcaatacacAACTTGTGTTCACCAATTTGGT
GAATACACAATATTTAAAAGAGTATatctcaatttttttgctcACTTCGC
TCGCACTAGCCTGTTCGAATTCTTCTTCATAAGTATCAAATTCTCATCGC
TTTTTTAGGGTTTATGCGGATAAATATGGTTACGGatgactttcaaaaat
tttccaaatggCTAAAGCCTCCTTTTCCATGTGAATATATGAACGATATG
TTCTAAGCACTCACACGTAAATTAGTACAAATTATAAGGAACACTCGGGG
ACGCCAATTTTAAGAATCATGTCTGCAATTTTGATAAGGCAAGAGTCTCA
GCCAGGGGTCTGCTTGACACATTTTCCTGCCGTgaatacagttgatgctc
tctaaaaGATCCATTTTGGCGTTTTGGCAGGGGGCTACGCCTCCCCAAGT
GGAGTTTTGAACGCCCAACTCTTAAAATTACCCTAAAAATGCGCTTTAAA
TTGCCCCCAAAGACCAgaaataacttgaaaattttttttttttgctccct
TCGCTCGCAATTAAGTTATAAGACGATTTTTGAAGGGagatctaactgcg
ccccacgaccaatttggtgaaaacaatattcaaaacaaaaactcacaAAT
TTTTTCTTGCTTCATTCGCACGCACTAGCTTCCTTCCATTTTTGGATCTA
GAGATAGTATTAAATTTATATCTTTATCCGTTACtttctactattcgaca
ttctatcACTCGATAAGCTCCCATTTTCGATGAAAGTTCGAGGTTCCTTG
ATGGTTTTCCGTtctcttattcaatttttagcatCTTGCTAaacttttgg
tcaaatttatgctctgttttggaaaaaaatttggcTCGCGTCAAACAGAG
TTAACTTTTTCCACTGACTAATAGAGAAGCATGACCATGGTTgtgttttt
tgttctttttttgtcaaaaattttgttcaatGTCATTATACTGTAATTGG
CTTTACTCAATCCATCTCAATGAGCAATGTCGCAattttttcttgctcgc
ttcgctcccatttcctaaatgtttctaaaaatgACCTGAATTTTAACTTC
AACTTTTGGTATACGAATGCAACCAAAAAATTTGGCGCCAGAATAAGCAT
ACAAGGCGCCTTAagccaaaattctacttttgcctGCCCATCCTTGAtct
acccaccacgctactgtttgGTAATCGTCATAGAGACTTTGGATGGTGAC
AAACCCAACCTTTATCGTCCAcgcatacccagcacccatatttgcctaag
taccccctccgggagataagtacctgaaaaattgggaaaaattgatcggt
accggtatttgaacgaaaaatttatcggtatatcggtaattgagagaaaa
agtgatcggtatatcggtattacGAAGGCCTGTACGCCCCCCACTATTGC
Tgcagcctctaaaattgacatttttcaaacattatgcattatgtattatg
caatatgcattatgttttatgcattatgtacccgttggatttaggaccac
tcacggtacgtCCTTCAttgactcaaatcaaatgactttggagattCACT
AAAACCTCTTAATATATAAGATATTAGGTTATTATATTACCGTCAACGAC
TCTAACTTGgcactatctgacaaaacatggagagcaatttggccaccatt
tcaccgaaccttcttaaagtcatttaattaacataacCACAAAGCATAGA
TAGCAAATGATGTGAATACGCTACTCTCGCCAGAGAGGCTTTAAGACCGC
AAAAGGAACAAATCTTTGCAACGAAAGAAACGCGTAAATGCGATCACATG
CATTCGCGAAAGCGTCCAAACACAGATATAAAAAAGTCTGTTCTTCCTAC
TCAgaaaattgtgagatctgttaCGACACTCGGTGACTTCcaaaagtctt
ttttatttagaattaTCTCTAAATAAGCACAGTTCTTTTTAGCAAATGAT
TCTACTTCAGTCTAAAATTTAGGATAGAAATATTTAAATCAACAAGTAGA
CCAAGAGCGGAGGGTAGTTTGTTCCGGTAGACCTATTCTTTCACCGTCTT
TTAATCAGTAGAGCACGTCTAATCAAATAGTCATTAAGAAACAAAGCAAC
AGTGACTTTTCTAAGGAAATTGTAATAAGATTTAAGATTTATGGCTGATT
TTAAGAGTAAAATTTGTTGAGGGACATTTTCAATTGTTGAGGAGACTCTG
GAAACTTTGGTACGTGAATTGAATGTTCTAAAGGTATTATAATGATGTTA
TGTCTTATATACTAAGATTATGGCAAGGTCTTATTATGCCTGAGTATTAT
AATTAAACGCGACTGCAGCTGACAATTTAGGCTAGGCCTAATTTACCTCT
TATTTCTTTCCTATTCCaacaatacaaaataaaatatccCGTATGTGatg
tttatatcaaaatctgcaatTAAACAAAAGTACTCCCTTCTACATAGTGT
TTCATTCATATCTaattaaataaacaaataaaattaattaaaaaataatt
gaataattaaataTTATTTAAAGAAATAAGCCACTTATCAGTATCATCTA
GTCTATTGCTATAAGTGGCCTACAGggaaaattccaagcactttggtCAC
TGGCCGTTTTTTGacttagaaattgagttttggtCTTCGAAGTAACCATT
ACAGGTGGTTATTATTTCACTAGCTTTATAATACTGAAAGATAATACTGT
GCATTatgaaatggcaaattttactttttcgatGGAACTCATTCTTCAAT
AAAATAATACTTTGTTTTTTAGGATTTATTCGAAAGGTCTATGGGATACT
TTCGGCACAACTTCTTTTGACAACTGCTGTTGGTGGATTGTTTATGTACA
ATGAATCAGCAAAAGCATTTGTTCAGTCCAGGTAGGTTATAATTCAAAAG
ATCTACCTAGCTGATTTCAAGCCTTACAGACTTATGTTGTTTTAATAACA
TTTAACATTTTATCTTGGACCTGTccattgatttttgaaaatattttcag
ttgtcaaaaaaacaaaagaatagtcCCTTATCTTGCTCTAAACAGCCACG
TTTTAGTATATAATTACCTTACTTTGGGctttggggggggggtatttAGA
GGTACAATTTCCAAACCCCTGGTAAATTAGGTTCCCCTGTttattcaaaa
ccaaaaaatctGGTTTAGAAAAGGAGATGGGTTCTTTTTGATTCCTTTAT
TCCTTTATTGCCTTTGCAGATGAATGTTCCTACTTCACTTTATTGTTGTG
TGACgattttggacctaccttaagggGGGGTCCTATAAATTGACCTTTGT
ATGTCCATCTGTCCGTCTGTCATTTCATTAggttttctcgggattggctc
attagttttttctgaatttttacacaatgatgcaaaatgataatgcccaa
aatatgatggagcctgattttggaaataaaaattattgggtgcaaattcc
agccaaaaaagattaaaaaaggatatttggactttgttgaaaattggaTC
GTTAATTTTTCACTATTCACTATTTGCTTATAAATACATTCATCCATCAA
tattcttagccaaattactcaatttgtGATGAGATATTCTTTTCCAATCC
CCTCCCTTAATAACACCCCAATGGGCACCAGGGGACAATCAAtagtgaaa
acaaacaatatgaATATTAATAAATCATCACAATTTGTGTTCCAAATGAT
TGTTTTAACGATCACGCTCACGTATAGATATCTGCTGAATCTtatcttta
attttttagtCCGAATCTACTGTACCTTGGTTGTTTTGCTTCCTTCGGAC
TTATCATTGCATTACATATATACAAGAATCAAACACCGatcaatttttat
ttactttttgcaTTTGTAAGTtgtaaaatacatatttttagtAATGTATG
CTAAAATAAGATGAATATAAAGGGAAAACCCCTATTCACAAATTAGGGGA
ATACCGTACATTTGGAATTCCCCTTTGTTTTTTCAGTTATTGATGAGATT
TGAGTTTTTTATTTAGTAAATAGACATTCTTTTGTCGCTGTTAAGagcat
gtttcaaaaaaatgcaaacataACAAAATCCTAGATTAAAGTGTTGTATC
AGATTGCTAGGCAGTTGATGCTGGTGATGTGTTAAGCTTTAAAAGATGAA
TTCTGGGCTTGGATTTATTGCTGAGCAATTCACTCACTCACAGTGGTTCC
TTTACTATTTTGACTTTCTGTCATAGTCAAATTTCTACTGTTGATCTGaa
atttctgttttcttttagACATTGGTTGAAGCATATACTGTAGGATTCAT
TGGTATAAGATATAATTTTTATCCCATTTTTTTATCCTGAAGTTTGACAT
TTTATACAAATGTTTTGAATAGTCTAGAACTCTTCCTGCGAATAATGTCA
TCTAGAGCAAACCATATAACACATaccttttcgtttttttttattttgct
aagGAATAGCTATCATTCTTCACCCTGACATGGCGTCAGAATTGGTTAAA
AATAGTGTGTACTCTGTTGAATAGTATTCTCCTCAAAAAGTTAATTCTTA
TTGGTTAAAAAGTGCATTATTATGACTTCAGTggtaaatattttcattca
ttaaaatcttttttcatttttagtaacCCTATATGATTCGGCGGTTGTCC
TTCAAGCCTTTGGGCTTACAATGGCTACAGTCATTGCCTTGACTGTATAC
ACTTTCCAATCCAAACGTGATTTCAGCTCATGGGGAGCAGGGTAACTATA
TTTTCATTGTATTATAAAGCTCTTTGAGCTCAATATATTGCCTATTTTAG
CCAACAATTACAACTGACTGATGAAACTTACGATTCTTCATTAATTTTAC
CCAAAATTATCTACAAACTCGTTCAATTAATTAAGAATCGTAAGTTTCAT
CAGTCAGTTGTAATTGTTGGCTAAAATAGGCAATATATTTTTGCCTGTTT
TTCGTAAATTAATTATgctaaactttttcaaacaatcatTCAACCAACAA
GTGTTGAGAAATGATGGACGAATACTGATTTTTTGCAAAGAAAATCAcaa
ttattatccatatagcggacATTAAGTAACTCATTAAAGGTTCAATCGGC
GGGCGatattgaaaggttttgtgactcAAATTGTAATACCCACGCTGAGG
AAACTAAAGCGCcaggcttcagagggctgaaatatcattaaccgcccaGG
TTATAGggcaataacgtcatttgcggtccctcggaattggattgaagtcg
ttgcattgaagcgaagaaACTAAACTAACGTCTTCAAACTGAACACTAAT
ATTATATTCATTTGCACAGATTACTGGTTAATAAGGCCAGCTTTATAAAG
TCAGTAATGAATGTACCTTATGAGCTTTTGCAATTAGTAATAGAGTATTC
TAGACATTACAACAATTTAAATCACTTTTTTTTTCCCTTTCAGACTTTTC
TCAATGTTATGGATCTTGATTTTATGCAGTTTCATGACAGTAAGAATGAA
AAAACATTATTCCTTgatctactctcgggtacctaatagccggggggccc
gctaattaatttttcgaaaattttccacccaggacattcttattccaacc
cccccccccNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNcccccccccccctgcttattccaaaccccccggctatt
aggtacccgagagtaaactTAATATGTAAACGTCCATAAGGCTTGAGAAT
ACATTTAACTTTTCAACAATCTCATGCTTAAAAATTGGCCAGCCAATTTC
TCCTAACAACTATATGCATTTTATTATGTACTAATAAATTGCAGTGTTTC
CAGAAAAAAGCTGAGCGGAATTTATATAAGTAAAAACCCCCATAATTGTT
GCCTATTTTTTATTCGAtgattcaacaaaataaatgaatttaGGAATTTT
CATTTGTATATTTATCTGCTTTTTCCAGGACACTGTATATATTTGCTaca
tctttttggacctacctccgggtgccccggaggaggttctataaattaac
ccatgtccgtccgttcgttcgttcgtccgtccgtctgttaccagcttttc
tcaggattggctcattagttttttctgattNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNacaatgatgcaaaatggcaatg
cccagaacNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNactttgtgcaaaatcctgtcattactt
ttttctgattttttgtacaaagatggagggcaagattctctaaagaatgg
ctgaagtgtttttttcctggaaaattcttattcgccttaaaagacggatt
ttcgtattttggggaaattccctttaactaaataagaaaatatagctttt
ctcaatgttgactcgttatttttttgtgattttttgcacaatgatgcaaa
atggcaatgcctaaaatgtgacggagccggattttcgaaaaaaaatatat
ttgggcaaatttgggccaaaaactacctaaaaatagggttttttggactc
tgtgcaaaatcctgtcattacttttttctgattttttgtacaaagatgaa
gggcaagattctttaaagaatggctgaagtgttttttcctggaaaattct
tattcgccttaaaagacggattttcgtattttggggaaattccctttaac
caaataagaaaatgtagcttttctcaatgttgactcataattttctgatt
ttttgcacaatgatgcaaaatgacaatgcccaaaatgtgacggagccaga
tttttaaggaaaatttttttgggcaaatttgggccaaaaacaaaaggttt
tttgggtctgaatggtttaagtgattctCGTATTTTGGgacattcctttt
taccattttacattattcaacacacaagctttatttttccattctgaatt
tttgtacaattattgtcacttttttcttattttcatctgatgttaatcat
taggtaggtccattcagcatgttgcttgttcttAAATAATTCTTTTAACT
TAATTCTTTTAGATGTTTTTCCAAGTTGAGGCTGTTCAGACAGTCATGGC
TGGAGTTGGGGCATTGTTGTTTGCTGGTTTCATCATCTTTGATACTCACA
TGTTAATGGAGAAGCTCTCACCAGAAGAATATATCATTGGTGCTATCAAT
CTCTATCTTGATATTCTTAACCTGTTCTTGGAGATTTTGAAATTAATGGC
TAAGAATAATAAGAATTAAAACCATTTAATATTCAACCATATTCCAGCCC
CAGCAGAATCACCATAAAGTGAGGAGGCTGAAGGCTCGAAATAAGATAAA
ACTCGctgggaatttgagaaaaaaatctcatttgctcaaagtTAGGTAGG
CTGAAGTTTCCCCATTCTCACTGCTTCCGTCGGgcctttattcatgatat
gaaccattgcaatgtcttctacggacgctacagctgattggttgaaagtg
acgtatttgctgtttttacgtcacttacgaccaatcagctgttgggtccg
tgatataatgtcggaagacattgcaatggtgcatatcatgaattctttaG
CTTCCTTATGAAGTCTAGAATCGCTGACATACAACTtaagaaaatttatt
gttttttttaataaccaTCTAAAGACACCTGCAGTACACTTTAATTCATG
CGCCTAATATTACACAATTTGCAATAATTTCCAGGTTTCTTGATTTATGC
TGGTTCATTGATTTTAGCACTTCATAGTGGTAGAGAtagaattttcaaat
attcaaatatatTAGACCAAATTTTCTACTAAATGTACTAAAGTTACTGA
CTTTTAAGATCACAACATTGTTATTTGAAGCTGTGCTACTGCAGGTTTCA
TACTTTTATTTGATGTATGAATTAAAAGATATTTGGAAAAATTGCTTGTT
TGTTATTACAAGATTAAATTTAGTCATTAGTACACGTTTCGATAGCAGAT
CAGCTGAAAGAAAGAACCTTCTTTTGTAGTGATTGCGCTCTAAAATGTTT
CTATTACTTTGAAATTATActtttaaaatatcatttttctaaaacaaatT
TATACATACTTTTATTGTGTCTTTGAGGGTGTATATTTAGTTTAATTTTA
TTTCTAAAtctattttctttaattttattGAGTCTTGTAATATAGTTTAA
TTATTTGGGACATTTTTTAATCTCCTTTTCTGCTATGGGCAAACCGTTTT
AACTTCAGGTTAAGTTAGC

Coding sequence (CDS) from alignment at sc0000587:59063..74181+

>TCONS_00026764 ID=TCONS_00026764|Name=TCONS_00026764|organism=Clytia hemisphaerica|type=CDS|length=5040bp|location=Sequence derived from alignment at sc0000587:59063..74181+ (Clytia hemisphaerica)
ATGGATTTTTCACTCAATATGGACGCACTAAAAGAGAGAAAGGAGACCCC
AGAAGTCTTCAGTGATACCTTTGTTCAGAGTAAAGTATCACTCAGGCTAG
GATTTATTCGAAAGGTCTATGGGATACTTTCGGCACAACTTCTTTTGACA
ACTGCTGTTGGTGGATTGTTTATGTACAATGAATCAGCAAAAGCATTTGT
TCAGTCCAGtCCGAATCTACTGTACCTTGGTTGTTTTGCTTCCTTCGGAC
TTATCATTGCATTACATATATACAAGAATCAAACACCGatcaatttttat
ttactttttgcaTTTACATTGGTTGAAGCATATACTGTAGGATTCATTGt
aacCCTATATGATTCGGCGGTTGTCCTTCAAGCCTTTGGGCTTACAATGG
CTACAGTCATTGCCTTGACTGTATACACTTTCCAATCCAAACGTGATTTC
AGCTCATGGGGAGCAGGACTTTTCTCAATGTTATGGATCTTGATTTTATG
CAGTTTCATGACAATGTTTTTCCAAGTTGAGGCTGTTCAGACAGTCATGG
CTGGAGTTGGGGCATTGTTGTTTGCTGGTTTCATCATCTTTGATACTCAC
ATGTTAATGGAGAAGCTCTCACCAGAAGAATATATCATTGGTGCTATCAA
TCTCTATCTTGATATTCTTAACCTGTTCTTGGAGATTTTGAAATTAATGG
CTAAGAATAATAAGAATTAAATGGATTTTTCACTCAATATGGACGCACTA
AAAGAGAGAAAGGAGACCCCAGAAGTCTTCAGTGATACCTTTGTTCAGAG
TAAAGTATCACTCAGGCTAGGATTTATTCGAAAGGTCTATGGGATACTTT
CGGCACAACTTCTTTTGACAACTGCTGTTGGTGGATTGTTTATGTACAAT
GAATCAGCAAAAGCATTTGTTCAGTCCAGtCCGAATCTACTGTACCTTGG
TTGTTTTGCTTCCTTCGGACTTATCATTGCATTACATATATACAAGAATC
AAACACCGatcaatttttatttactttttgcaTTTACATTGGTTGAAGCA
TATACTGTAGGATTCATTGtaacCCTATATGATTCGGCGGTTGTCCTTCA
AGCCTTTGGGCTTACAATGGCTACAGTCATTGCCTTGACTGTATACACTT
TCCAATCCAAACGTGATTTCAGCTCATGGGGAGCAGGACTTTTCTCAATG
TTATGGATCTTGATTTTATGCAGTTTCATGACAATGTTTTTCCAAGTTGA
GGCTGTTCAGACAGTCATGGCTGGAGTTGGGGCATTGTTGTTTGCTGGTT
TCATCATCTTTGATACTCACATGTTAATGGAGAAGCTCTCACCAGAAGAA
TATATCATTGGTGCTATCAATCTCTATCTTGATATTCTTAACCTGTTCTT
GGAGATTTTGAAATTAATGGCTAAGAATAATAAGAATTAAATGGATTTTT
CACTCAATATGGACGCACTAAAAGAGAGAAAGGAGACCCCAGAAGTCTTC
AGTGATACCTTTGTTCAGAGTAAAGTATCACTCAGGCTAGGATTTATTCG
AAAGGTCTATGGGATACTTTCGGCACAACTTCTTTTGACAACTGCTGTTG
GTGGATTGTTTATGTACAATGAATCAGCAAAAGCATTTGTTCAGTCCAGt
CCGAATCTACTGTACCTTGGTTGTTTTGCTTCCTTCGGACTTATCATTGC
ATTACATATATACAAGAATCAAACACCGatcaatttttatttactttttg
caTTTACATTGGTTGAAGCATATACTGTAGGATTCATTGtaacCCTATAT
GATTCGGCGGTTGTCCTTCAAGCCTTTGGGCTTACAATGGCTACAGTCAT
TGCCTTGACTGTATACACTTTCCAATCCAAACGTGATTTCAGCTCATGGG
GAGCAGGACTTTTCTCAATGTTATGGATCTTGATTTTATGCAGTTTCATG
ACAATGTTTTTCCAAGTTGAGGCTGTTCAGACAGTCATGGCTGGAGTTGG
GGCATTGTTGTTTGCTGGTTTCATCATCTTTGATACTCACATGTTAATGG
AGAAGCTCTCACCAGAAGAATATATCATTGGTGCTATCAATCTCTATCTT
GATATTCTTAACCTGTTCTTGGAGATTTTGAAATTAATGGCTAAGAATAA
TAAGAATTAAATGGATTTTTCACTCAATATGGACGCACTAAAAGAGAGAA
AGGAGACCCCAGAAGTCTTCAGTGATACCTTTGTTCAGAGTAAAGTATCA
CTCAGGCTAGGATTTATTCGAAAGGTCTATGGGATACTTTCGGCACAACT
TCTTTTGACAACTGCTGTTGGTGGATTGTTTATGTACAATGAATCAGCAA
AAGCATTTGTTCAGTCCAGtCCGAATCTACTGTACCTTGGTTGTTTTGCT
TCCTTCGGACTTATCATTGCATTACATATATACAAGAATCAAACACCGat
caatttttatttactttttgcaTTTACATTGGTTGAAGCATATACTGTAG
GATTCATTGtaacCCTATATGATTCGGCGGTTGTCCTTCAAGCCTTTGGG
CTTACAATGGCTACAGTCATTGCCTTGACTGTATACACTTTCCAATCCAA
ACGTGATTTCAGCTCATGGGGAGCAGGACTTTTCTCAATGTTATGGATCT
TGATTTTATGCAGTTTCATGACAATGTTTTTCCAAGTTGAGGCTGTTCAG
ACAGTCATGGCTGGAGTTGGGGCATTGTTGTTTGCTGGTTTCATCATCTT
TGATACTCACATGTTAATGGAGAAGCTCTCACCAGAAGAATATATCATTG
GTGCTATCAATCTCTATCTTGATATTCTTAACCTGTTCTTGGAGATTTTG
AAATTAATGGCTAAGAATAATAAGAATTAAATGGATTTTTCACTCAATAT
GGACGCACTAAAAGAGAGAAAGGAGACCCCAGAAGTCTTCAGTGATACCT
TTGTTCAGAGTAAAGTATCACTCAGGCTAGGATTTATTCGAAAGGTCTAT
GGGATACTTTCGGCACAACTTCTTTTGACAACTGCTGTTGGTGGATTGTT
TATGTACAATGAATCAGCAAAAGCATTTGTTCAGTCCAGtCCGAATCTAC
TGTACCTTGGTTGTTTTGCTTCCTTCGGACTTATCATTGCATTACATATA
TACAAGAATCAAACACCGatcaatttttatttactttttgcaTTTACATT
GGTTGAAGCATATACTGTAGGATTCATTGtaacCCTATATGATTCGGCGG
TTGTCCTTCAAGCCTTTGGGCTTACAATGGCTACAGTCATTGCCTTGACT
GTATACACTTTCCAATCCAAACGTGATTTCAGCTCATGGGGAGCAGGACT
TTTCTCAATGTTATGGATCTTGATTTTATGCAGTTTCATGACAATGTTTT
TCCAAGTTGAGGCTGTTCAGACAGTCATGGCTGGAGTTGGGGCATTGTTG
TTTGCTGGTTTCATCATCTTTGATACTCACATGTTAATGGAGAAGCTCTC
ACCAGAAGAATATATCATTGGTGCTATCAATCTCTATCTTGATATTCTTA
ACCTGTTCTTGGAGATTTTGAAATTAATGGCTAAGAATAATAAGAATTAA
ATGGATTTTTCACTCAATATGGACGCACTAAAAGAGAGAAAGGAGACCCC
AGAAGTCTTCAGTGATACCTTTGTTCAGAGTAAAGTATCACTCAGGCTAG
GATTTATTCGAAAGGTCTATGGGATACTTTCGGCACAACTTCTTTTGACA
ACTGCTGTTGGTGGATTGTTTATGTACAATGAATCAGCAAAAGCATTTGT
TCAGTCCAGtCCGAATCTACTGTACCTTGGTTGTTTTGCTTCCTTCGGAC
TTATCATTGCATTACATATATACAAGAATCAAACACCGatcaatttttat
ttactttttgcaTTTACATTGGTTGAAGCATATACTGTAGGATTCATTGt
aacCCTATATGATTCGGCGGTTGTCCTTCAAGCCTTTGGGCTTACAATGG
CTACAGTCATTGCCTTGACTGTATACACTTTCCAATCCAAACGTGATTTC
AGCTCATGGGGAGCAGGACTTTTCTCAATGTTATGGATCTTGATTTTATG
CAGTTTCATGACAATGTTTTTCCAAGTTGAGGCTGTTCAGACAGTCATGG
CTGGAGTTGGGGCATTGTTGTTTGCTGGTTTCATCATCTTTGATACTCAC
ATGTTAATGGAGAAGCTCTCACCAGAAGAATATATCATTGGTGCTATCAA
TCTCTATCTTGATATTCTTAACCTGTTCTTGGAGATTTTGAAATTAATGG
CTAAGAATAATAAGAATTAAATGGATTTTTCACTCAATATGGACGCACTA
AAAGAGAGAAAGGAGACCCCAGAAGTCTTCAGTGATACCTTTGTTCAGAG
TAAAGTATCACTCAGGCTAGGATTTATTCGAAAGGTCTATGGGATACTTT
CGGCACAACTTCTTTTGACAACTGCTGTTGGTGGATTGTTTATGTACAAT
GAATCAGCAAAAGCATTTGTTCAGTCCAGtCCGAATCTACTGTACCTTGG
TTGTTTTGCTTCCTTCGGACTTATCATTGCATTACATATATACAAGAATC
AAACACCGatcaatttttatttactttttgcaTTTACATTGGTTGAAGCA
TATACTGTAGGATTCATTGtaacCCTATATGATTCGGCGGTTGTCCTTCA
AGCCTTTGGGCTTACAATGGCTACAGTCATTGCCTTGACTGTATACACTT
TCCAATCCAAACGTGATTTCAGCTCATGGGGAGCAGGACTTTTCTCAATG
TTATGGATCTTGATTTTATGCAGTTTCATGACAATGTTTTTCCAAGTTGA
GGCTGTTCAGACAGTCATGGCTGGAGTTGGGGCATTGTTGTTTGCTGGTT
TCATCATCTTTGATACTCACATGTTAATGGAGAAGCTCTCACCAGAAGAA
TATATCATTGGTGCTATCAATCTCTATCTTGATATTCTTAACCTGTTCTT
GGAGATTTTGAAATTAATGGCTAAGAATAATAAGAATTAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_015039XLOC_015039Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00026764-proteinTCONS_00026764-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00026764-exon-sc0000587-1491911889:59063..59084TCONS_00026764-exon-sc0000587-1491911889:59063..59084Clytia hemisphaericaexon
TCONS_00026764-exon-sc0000587-1510915933:59063..59084TCONS_00026764-exon-sc0000587-1510915933:59063..59084Clytia hemisphaericaexon
TCONS_00026764-exon-sc0000587-1575043694:59063..59084TCONS_00026764-exon-sc0000587-1575043694:59063..59084Clytia hemisphaericaexon
TCONS_00026764-exon-sc0000587-1491911889:59174..59335TCONS_00026764-exon-sc0000587-1491911889:59174..59335Clytia hemisphaericaexon
TCONS_00026764-exon-sc0000587-1510915933:59174..59335TCONS_00026764-exon-sc0000587-1510915933:59174..59335Clytia hemisphaericaexon
TCONS_00026764-exon-sc0000587-1575043694:59174..59335TCONS_00026764-exon-sc0000587-1575043694:59174..59335Clytia hemisphaericaexon
TCONS_00026764-exon-sc0000587-1491911889:68135..68243TCONS_00026764-exon-sc0000587-1491911889:68135..68243Clytia hemisphaericaexon
TCONS_00026764-exon-sc0000587-1510915933:68135..68243TCONS_00026764-exon-sc0000587-1510915933:68135..68243Clytia hemisphaericaexon
TCONS_00026764-exon-sc0000587-1575043694:68135..68243TCONS_00026764-exon-sc0000587-1575043694:68135..68243Clytia hemisphaericaexon
TCONS_00026764-exon-sc0000587-1491911889:69122..69227TCONS_00026764-exon-sc0000587-1491911889:69122..69227Clytia hemisphaericaexon
TCONS_00026764-exon-sc0000587-1510915933:69122..69227TCONS_00026764-exon-sc0000587-1510915933:69122..69227Clytia hemisphaericaexon
TCONS_00026764-exon-sc0000587-1575043694:69122..69227TCONS_00026764-exon-sc0000587-1575043694:69122..69227Clytia hemisphaericaexon
TCONS_00026764-exon-sc0000587-1491911889:69631..69664TCONS_00026764-exon-sc0000587-1491911889:69631..69664Clytia hemisphaericaexon
TCONS_00026764-exon-sc0000587-1510915933:69631..69664TCONS_00026764-exon-sc0000587-1510915933:69631..69664Clytia hemisphaericaexon
TCONS_00026764-exon-sc0000587-1575043694:69631..69664TCONS_00026764-exon-sc0000587-1575043694:69631..69664Clytia hemisphaericaexon
TCONS_00026764-exon-sc0000587-1491911889:69986..70103TCONS_00026764-exon-sc0000587-1491911889:69986..70103Clytia hemisphaericaexon
TCONS_00026764-exon-sc0000587-1510915933:69986..70103TCONS_00026764-exon-sc0000587-1510915933:69986..70103Clytia hemisphaericaexon
TCONS_00026764-exon-sc0000587-1575043694:69986..70103TCONS_00026764-exon-sc0000587-1575043694:69986..70103Clytia hemisphaericaexon
TCONS_00026764-exon-sc0000587-1491911889:70806..70851TCONS_00026764-exon-sc0000587-1491911889:70806..70851Clytia hemisphaericaexon
TCONS_00026764-exon-sc0000587-1510915933:70806..70851TCONS_00026764-exon-sc0000587-1510915933:70806..70851Clytia hemisphaericaexon
TCONS_00026764-exon-sc0000587-1575043694:70806..70851TCONS_00026764-exon-sc0000587-1575043694:70806..70851Clytia hemisphaericaexon
TCONS_00026764-exon-sc0000587-1491911889:72975..73238TCONS_00026764-exon-sc0000587-1491911889:72975..73238Clytia hemisphaericaexon
TCONS_00026764-exon-sc0000587-1510915933:72975..73238TCONS_00026764-exon-sc0000587-1510915933:72975..73238Clytia hemisphaericaexon
TCONS_00026764-exon-sc0000587-1575043694:72975..73238TCONS_00026764-exon-sc0000587-1575043694:72975..73238Clytia hemisphaericaexon
TCONS_00026764-exon-sc0000587-1491911889:73312..74181TCONS_00026764-exon-sc0000587-1491911889:73312..74181Clytia hemisphaericaexon
TCONS_00026764-exon-sc0000587-1510915933:73312..74181TCONS_00026764-exon-sc0000587-1510915933:73312..74181Clytia hemisphaericaexon
TCONS_00026764-exon-sc0000587-1575043694:73312..74181TCONS_00026764-exon-sc0000587-1575043694:73312..74181Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000587supercontigsc0000587:59063..74181 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
11.3263	9.63794	4.69329	4.6187	48.4724	34.3947	34.8535	36.9777	43.5083	46.1441	51.1289	32.3526	47.5557	41.8587	34.4934	31.363	27.6779	29.8041	47.2287	65.1347	25.422	23.2171	26.5964	29.1822	38.7542	44.8728	41.4873	42.0081	29.2356	27.5984
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR006214Bax_inhibitor_1-related
Blast
[Close]
BLAST of TCONS_00026764 vs. Swiss-Prot (Human)
Match: LFG4 (Protein lifeguard 4 OS=Homo sapiens GN=TMBIM4 PE=1 SV=3)

HSP 1 Score: 215.312 bits (547), Expect = 6.755e-65
Identity = 117/230 (50.87%), Postives = 155/230 (67.39%), Query Frame = 1 
Query:  100 NMDALKERKETPEVFS--DTFVQSKVSLRLGFIRKVYGILSAQLLLTTAVGGLFMYNESAKAFVQSSPNLLYLGCFASFGLIIALHIYKNQTPINFYLLFAFTLVEAYTVGFIVTLYDSAVVLQAFGLTMATVIALTVYTFQSKRDFSSWGAGLFSMLWILILCSFMTMFFQVEAVQTVMAGVGALLFAGFIIFDTHMLMEKLSPEEYIIGAINLYLDILNLFLEILKLM 783
            + D    R    + F+   +   + V +R+ F+RKVY ILS Q+LLTT    +F+Y ES + FV  SP L+ L    S GLI AL + +++ P+N YLLF FTL+EA TV  +VT YD  ++LQAF LT      LTVYT QSK+DFS +GAGLF++LWIL L  F+  FF  E ++ V+A  GALLF GFII+DTH LM KLSPEEY++ AI+LYLDI+NLFL +L+ +
Sbjct:    3 DPDPRYPRSSIEDDFNYGSSVASATVHIRMAFLRKVYSILSLQVLLTTVTSTVFLYFESVRTFVHESPALILLFALGSLGLIFALILNRHKYPLNLYLLFGFTLLEALTVAVVVTFYDVYIILQAFILTTTVFFGLTVYTLQSKKDFSKFGAGLFALLWILCLSGFLKFFFYSEIMELVLAAAGALLFCGFIIYDTHSLMHKLSPEEYVLAAISLYLDIINLFLHLLRFL 232
The following BLAST results are available for this feature:
BLAST of TCONS_00026764 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
LFG46.755e-6550.87Protein lifeguard 4 OS=Homo sapiens GN=TMBIM4 PE=1... [more]
back to top