TCONS_00026752 (transcript) - C. hemisphaerica

Overview
NameTCONS_00026752
Unique NameTCONS_00026752
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1455

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00026752 ID=TCONS_00026752|Name=TCONS_00026752|organism=Clytia hemisphaerica|type=transcript|length=1455bp
GGAGTCCGCCGGCATAGACAATTGTGTACGTAGCGAGCACCATTATCTTC
ACTTTTCCAAGAATTTGGAAGAAAGcaaataaaacaaaaatctttttcaa
aatgttacTGGTAATATCATTCATTGCGTGTATAATTGGCACCATTCAAT
CATATCCAACCAAGCAAAGTCATGTTCCATATTTCCACAAAGGACGTCCT
AAAGGTGGATTTCTTGGTGACCCCTACATTGATCcaagacaaaatttcaa
agctGCTGAACCGCAATGGTACACACAACAATTAAACCATTTCGATGATC
AAGACACTCGAACATGGCAGCAAAAGTATTATGTCAATGCCACTCAATTT
GGTGAAAATGGACCAGTTTTTCTAATGATTGGAGGTGAAGGACCACTCAG
TGCTCGTTGGGTTGGTGTTGGCTCAATGGTGGAAATGGCCAAAGAACACA
AAGCACTTGTCTTGGCTTTAGAACATCGATATTATGGTGACAGTCATCCA
ACAAGtGACACTAGTGTTGaaaatctgaaatatttgagCAGCGAGCAAGC
TTTGGCTGACTTGGCGACTTTCAGAGCATCTATGGTGGAACAGTTTGCAT
TGAGTGATAAAAACAAATGGATTTCTTTTGGTGGTTCATATCCTGGTGCT
TTGTCAGCATGGTTCAGATATAAATTTCCACATCTGGTTCACGGTGCCGT
TGCTAGTAGTGCACCCATCAATGCTCAAACAGATTTCCCTGAATATTTGG
AAGTGTCTACAGATTCTTTGGGCACACAAGAATGTAAAGACAGTGTACAA
GCGGCAACTACCAGTGTGGAAAAATATGTTCAAACAGAAGCTGGGCGGAA
AATGCTGACTGATCTCTTCCATCTTTGTGAGCCTCTGAGTGACGATCCAA
ACGACATTTCTCAATTCACTTCATCAATGGCTGGTAATTTCTTTGGTGTC
ATCCAATACAATAAAGACAATCGTGCTTTCGAGGGAGCCACAGGTACCAA
CATCACAGTGGACACATTATGTAACATCATGTCCTTACCAATATTTGGTG
ATGAGATGCATCGCTATGCCAAGATCAACGAAATCATGATGGAAACATAC
AAACAAACTTGCATCTCACCCAATTATAAGAAATTCATTGAAGAAATGCA
AGTCACCGATTGGAAATCTGTGGAAGGAGGTCGTCAATGGACATATCAAA
CTTGCACCGAGTTTGGTTATTACCAATCATCGGACAGCAAATCACAAGTC
TATGGCACAACATTCCCTTTGAGTTTTTGGACGAAACAATGTGTGGATAT
TTTTGGCGCCAATTTCAACGAGACGAGTATCAACCGAGCTGTTGATTGGA
CCAATGATAATTACGGTGGCTACAATATGAACCAACCAAggattgtCTTT
CCGAACGGTTCAATAGATCCTTGGCATGCGTTGAGTTTCACCGATGATCA
TNACT
Run BLAST on NCBI

transcript from alignment at sc0000582:4811..17621-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00026752 ID=TCONS_00026752|Name=TCONS_00026752|organism=Clytia hemisphaerica|type=transcript|length=12811bp|location=Sequence derived from alignment at sc0000582:4811..17621- (Clytia hemisphaerica)
GGAGTCCGCCGGCATAGACAATTGTGTACGTAGCGAGCACCATTATCTTC
ACTTTTCCAAGAATTTGGAAGAAAGCAAATAAAACAAAAGTAAGTTCTAT
CTTTCCACTTTCGTTTCGTTTTCAACTTTGGGCAGATGGCTGTGGGGGAC
CAAATAAATAAAGGCGAGTTTAGAAATTTTGGTCAACTTAATTATACATG
TTTTTTTTATTTTTGAAGCCTTCAAATGATTCTAGCTTTTTCAGTCTGTC
AGTCAGAAACATCTGGCAAGGCAAGTTCCTGTACTCAGCCGGAAAATGTT
ATATCGGATGGCCAAAAGTCACCTTCTTTTCTTTCCTATCTCTTATCCTA
TTTTTCTCTTTTCTGACTGTCTGAGTTTCTGAGACTTTCTCATTTCTGAC
TGAGTTTTCATACCTGTCAATCATTTATTTGTCCATCAATTTCGACCTGT
CTAATGTCCAGACGGTGTCAATCGAACAACTTCGAACAAAAATCGCAATC
GAACCAATCGAACGTAATTGAACGCGATCGAATAATTGCGATTCGATTGT
CCAACGTAATCGAATCTTAATCGAACGGCCGATTCCTGGGTAATATTAGA
TTGTGTTCGATTGCGTTCGAGTAATGTTCGATTGATAGTTGACTATGTTC
GATTGGTTCGATTGATTGTCAATTACATTGGATTTATGTTCGATTACGAT
TATGTTCGATGAGTTTGATTGCGATTAAATCAAATTGGATCACTCTGTTA
GAGCTTTTTAGCGTGGGCGGCCGAGTGCTTAAGTACCATAACAAAGCGAA
TAAAATCTAACACACAATTGAATCAATCGAACGTAATCGAATACAATTGA
ACGTAATCGAAGCAATCGAACAGTAAATCCTGGGTAATATTCGATTGCGA
TTCGATTGCGTTCGACAATCGAATTGCAATTATTCGATTGCGTTCAATTG
CATTCGATTGATTCGGCGTTCGATTCGTTCGATTGACACCGTCTGGTAAT
GTTCGCACCGAGTGGGATTCGAACCACCACCAAAGAAAGATCTTCAGATT
CGGAAACCAGCGCTCTATCCGTTGAGCTATCGCCGCACAGCAAATGATAC
AATTCATAACATATTATACCGAACTGGCAAAGACGGGGGTAATATTATTA
TAATATGGGTAAAAGTACCCCTTTTTTAAACCTGACTGAAATTCGAGCCG
TTACTAGCAACCCTGCGGGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNCCAAACAACAAAACCCCCGGAAAGGTGACTATCAGCG
ATCCGTGGATAAAAAAATAAAATAAAAAAATGAAGGTGACTTTTGGCCAT
CCGATCTAAGAGCATCCTACTCAGCCGTAATAGACCTTTTTGCCTTTCTA
TCCGCCATCATGAATTGTAAAAATACAGGAACGAAAAAGCTGTGGTTAGA
TTTAGTTGAAAAGCATGCAAAATATGCAAGTTTACACAAAGATTTTTAAA
AAAGACAACAAAGCACCTTATAAATTAACAATAGATCCAAAAGGGCGTCC
TTCTAAGACAATTTGCTTTGGTCTCTAGCTTATTGGGAGGTAGTAATGTT
TTTGGTTGTTTTCAATGGAAAATGTACCGTCAACTGCTCCAACTTCTTTG
GACTATCTGACAAAACATGGGACGGCAATTCGGCCACCATTTCACCGAAC
CTCCAAAGTCATTTAGGGGCCGTCGACAAACGATTTTCCTTTTTTTTAAC
AACTTCTGGCCGTAAGGGGTGGGAGGGGGTCACTGCAATGCAGTTAAAAA
AATTTTTAAAAAGGGAAAGTCTCACTTACAAATTTCATCAGTCCAAAAAG
TAGAAACATGTGAAGAAAGGCTAAGACCAAAGCAACCACACGACATTCAC
CTTATTCCCGATCACCAATTAATGCTTCAACGAGAAAAATGACTGGTCAC
GCGACGAAAGTCGGCAATTTTTCCCCCCGCCTTAGTTGTCTCCTTGCTCC
ACCCATCCCGCCCTGACTGGCTGCGGGGCTTGGGGTTTCAAAATTGAAAG
GTCAAAACTCAAAACCACATGTTTATTCCGAGTGAAAAGAAGAACATTGA
GGATTACGATTCAAAAGAACATGGCGGCTATGGACCAGTGAAAGTGTGTG
AAAGTATTTACTTTTGAAGAATTTTTTTGGCCGCTAAGACGTAGGGAGGA
GGGGGTCTGAACCTTAACAGCCTCAGGCCGTTATAAAAAAGGACAGTCGT
TTGTCGATNAGAATTTTTTTGGCCGCTAAGACGTAGAGGGGGAGGGGGTC
TGAACCTTAACAGCCTCAGGCCGTTAAAAAAAAGGACAGTCGTTTGTCGA
CGGCCCCTTAATTTGAGTTAATGAACAGCGTATTAAAAAATGCACGATTT
CTCCTTCGCACTGAATAGGCTTTTAAATCGAAATATGAAAAAAATCCGTA
GTGGAACACAAGCAAATGTTGGAACGAAGATAGACAGTGAACCCGTCTGC
GTATTTTTTCTAAATCTGATGAGTCAGAGCTGTGAGTCCGATTTTGGCCT
CAAAAAAATTACAGTAGGAAATTCGAATTTAGCGCTGTCCTCACTTACTA
AAATAAAAACCAAATTTCAGAACTTGCGATTTCTTTAAGAAAGTGTGACT
AAGTGAAACAATAACAGGATTTGATTGGCTGGGTTTTCAACCGCTATTAG
GATATGTGAAATTCAAACTGTCAGCCCATACCATGCTATATATTTCGCCA
TCAGTATATAGAATAAGAAATCATAGCATGGATCTCCAGGCTAGAACAAA
GAAGACCAAATTAGTGGCAATACTATGCACATGCGTTTGCGTAGGGTAAA
ATGGCGAAACCGAAATGCGAAAATTGAATTTGGCTAAAATTTTTTGAAAA
TGACCCTACAAGATTTGACCATATCTTTTTATTCAATGAAGAGATTACTT
TCAAATAAAAAATATATTGACAATGAATGGGTAAGCTTTCTAGAAATCCA
AACATCAATTGCATAGCTTTTACCAAAAAATAGCACTTTAGGATCAGAAA
CAGTCAAAAACCAGCTTTTGCCAATTTTCATTGAGTTACAGGAATTAATT
CCTTGTTTGTTTTGATCTGAAATTTTCAGTAGGGGTGGCCAACATGGTTC
CCTTGCTCCTATCAGGGGGGCCCGAGGCGGGGGTAAGAGAATTAAAGTTT
CTAAGTAAAATCTTTAATTATCACCCAAAAAAGTGCTTTTTTTTGTCCAT
ATCTTTTAAATCGATAGTCCCAGCCTTATCCCTCCTTCAGTAAAGCTTCC
TATACATTTTGTCCTTCAGAAAAACCAAAAATATGGGCCTTAATTGTTTG
CTTTCAGTTCCTGCAGCCAATAGTGTGACCCCCTGTATTTCTATTTTATT
TTGCGCGGGTTTTTCAATAGAGATGTCACATGACTCCAATCCCGCAGTCT
TATTGGACTAGAGAAAGCGAAAGTGAAATTGCGCGATTTGATTGGATGGA
AAAAAAAGGGAACTGGAACCGAATGGAATTCTCTGGAATTCTCATTCTAA
AACAAGATGGCGGCGAGAAAAGCACGTCTTTTGCTTTGGACGTTGGTTGA
TTTTAAGGTTTTGTCTTATCTTATCTCATTTACTTTAATTAGTAGAGGCT
TCTTCAATATTTGGGGAAGGTAAGTCTATAAAAGTTATTTCTTTTTCGGT
GGAAAAAAGTGTTTTTAAAAAAGCATTTTTTGTGCTCAAGGTTTATTTTC
TTCGCAAATTTTTGTCTTCAATCTTAAATAGATGAACAAGTATTTCACTG
ATGGTTATGAATTTTTCAAAGAACATAGTAAAACTATTCAGGAACCTGGA
GTCATCAAATCAAATTTGTTGTCAAAGAGATTTAACAGCAAGTGAAAATA
CCGGCCAGAATATCAACAGTCCCATGTTTTGACCAATCGTCCCTAGTTAG
AGCAGTTGACGATAAGAAACTTAAGTTTACAAGTGTCATTTAGTTTTTGC
TGGCCTATAAAATGGCAGGATCCTGACTTCCCAGAAAAATCTTTGTGCCA
TTATTAATTTCCCTATCATGTATAGCAACGACAGATTTTGTAAAAATTGG
AGACTGAACTTTTCAGAAAAATAAGCATAATTATGATAAGCATACTTTGA
GTCTGAGTCTAAAATAACCCTCAGCATAACTGAGCTTGTTTCCCAAAAAC
ATATGCTTAAAAAGACATGTATGCTGTATGCGAGCACTAAAGCTAAAGTC
CTCCAAAAGCAGGAAAAAAAATCAGTTTTTTAAAGTTTGTAAAAAAATGC
AACATGTAAGATCTTTCAAATTAGGATGTGAATAGGATTTTGGGTTACTA
CGTTTTAGGGCAACACTGCCTGTAATAGATCAATTTCACATATACTGAGT
TTTTTATCTTAGTGACATTCTCAGACCTTGTGACATACTTGTACTTTTCT
AGTACTGTTTCATAAGAAGCACATCATGACATAAACCTTTTTCGAGTCTG
CTAAATGACGTGCCCTACGTGCCCACGTGCCCTCATTTTTTTGACGTGCC
TTCGTGCCCTACGTGCTTTACGTGCCTTCGTGCCTTACGTGCCCAACGTG
CCTACGTGCTCGCGTGCCCTCCGAAATTTTACGTGCCCGACGTGCCTACG
TGCTTACGTGCTTGCGTGCCCAAATTTTTGACGTGCCCTCAAATTTTGAC
GTGCCCTCGAATTTTGACGTGCCCTCGAATTTCGACGTGCTTCAAATTTT
GACGTGCCCTCCAATTTTGACGTGCCCTCAAATTTTGACGTGCCCTCCAA
TTTCGACGTGCCCTCCAATTTCGGCGTGCCCTCAAATTTCGACGTGCCCT
CAAATTTTATCGTATTGTCAAAATTAACAACAGTATTGTCACTATGATGA
ATTATATACTACACTTGGTTGGGGTTTTAAAGTTGGAAGAAAAAAAATAT
GAAGAACATCTTTTGTCTGCTTATAAAAGAACATCGACGAAAAGAATTAG
CAAGAAACAACGAGGGAGATGGTTAAGCATTACTTCGAATCAAACTAAAT
AAAGAACTTTTCTGATTGGTTGAAAAAAGAGAAAATATGTGAGACGCGTG
CTACTTACTTTTTATCAGCTGGCTCTCTTTTTATTTCAAGTTAGGGGATA
TAGTGTTAATTATAAGAACTTTTTGAAATAGAAAGGAATTTTTTAAGATT
TTAATAGAGGTATGGCATTAGAAATCCCTTCAAATCTTAAGCATCACATT
GAAATACAACTTGAAATTTTGCACAAAGACAGTCTCATAGTTTTTTGTTT
CCCTATATGTATAAAAACTTTTTTAATTCGATGCCAATTTTTTTGGAAAT
TTGTATTAAAAATGGTGTTTGCATTTTGGCAAGATCGTATGTTGTCTCCA
CTTTAAAAGGAGAACATTTTAAGTAAAACATCATAAAGTCAGTGACGCTG
AAAATCTTAAATCCGCTGACCAAAAAGAAAAGTTTGTGTTTCTTTAAANN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NGACTTTTTGCGATTTTTTTGTGCAGAACGAGGAACAGTTTAACTTCACA
GAAGAATTCATAGGAGAGGGACGAAATGTCTTCTGATAATGAATCATCAA
GGTATAGGGCACGTCAAAATTCGAGGGCACGTCAAAATTCGAGGGCATGT
CAAAATTCGAGGGCACGTCAAAATTCGAGGGCACGTCAAAATTCCAGGGC
ACGTCAAAATTCGAAGGCACGTCAAAACTTGAGGGCACGTCAAAATTCGA
GGGCACGTCAAAATTTGAGGGCACGTCAAAATTCGAGGGCACGTCAAAAC
TTTGGGCACGCAAGCACGTAGGCACGTCGGGCACGTAAAATTTCGGAGGG
CACGCGAGCACGTAGGCACGTTGGGCACGTAAGGCACGCGAGCACGTAAG
GCACGTAGGGCACGAAGGCACGTCAAAAAATGAGGGCACGTGGGCACGTA
GGGCACGTCATTTAGCAGACTCACCTTTTTCAACTACAGCAGAGACCAAC
CCAGTCAAAATCATCATCAAATAACATCCAAATGAAAATGTAAATGACGT
TAGCACTCAGATTGAGAATGTGATAGACTTTTTGAACAAAATATTTTTAG
TTATGTTCATTTATTTTTTTAAATCTTGATAAAAATAATTTCAATTTAAT
ATTACAAGACATAGTTGTGTAGATGTGTACCCTTTACCATATGATATCGA
ACAGGAGACAAATCCTAGCCCGTGTTGATCACCTTGGCGCCAAAAAGGGG
GCTAAAAAATATCTGACAGGATTGCAAAATTACTAAATTTATAACAAGTA
TACTTGACAGGGTCACCATGATCTTTTCATTACTTTGTATGGGAAAATAT
CAGATTCTGCATCAGACAGGGTCCAAATCTTGTATATTAATGGTAATTAT
CTGCCTAATCGGAAACCATTTTTATACAGTACATGACTTAAAGGATTAAT
TTTTAAGTTATCTTATCGGTTTTAGATCTTTTTCAAAATGTTACTGGTAA
TATCATTCATTGCGTGTATAATTGGCACCATTCAATCATATCCAACCAAG
CAAAGTCATGTTCCATATTTCCACAAAGGACGTCCTAAAGGTGGATTTCT
TGGTGACCCCTACATTGATCCAAGACAAAATTTCAAAGCTGCTGAACCGC
AATGGTACACACAACAATTAAACCATTTCGATGATCAAGACACTCGAACA
TGGCAGCAAAAGTATTATGTCAATGCCACTCAATTTGGTGAAAATGGACC
AGTTTTTCTAATGATTGGAGGTGAAGGACCACTCAGTGCTCGTTGGGTTG
GTGTTGGCTCAATGGTGGAAATGGCCAAAGAACACAAAGCACTTGTCTTG
GCTTTAGAACATCGATATTATGGTGACAGTCATCCAACAAGGTGTGTTGT
AGATTTGTGTTCAATTTATATCTTTGACCTTAGTTATCCTGATAAAAGGA
TTTCGCAAATATTGCAAAATCGAAATATGGTTATTGCAATTTTCGAGCCT
ATCTTCAACACTTTTTGTTATACATTTTGGTGATTTAGATTTTAAGGAAA
ATCCAAGTTATAAGTTATAAGTGTATAGGTGCTAGTCAAGTTTATAACCT
AAAGAATGTACTGTATTTATTTAATCCTTCTTTAAAACGAATATATTTNG
GTGCTAGTCTAAGTTTATAACCTAAAGAATGTACTGTATTTATTTAATCA
TTCTTTAAAACAAATATATTGTTTGTTTTGAAATAATTTATATGGGGCAT
TTTGTGCCTTTAATTATAAGTAGAATTATCATTTTTGTTTTAGTGACACT
AGTGTTGAAAATCTGAAATATTTGAGCAGCGAGCAAGCTTTGGCTGACTT
GGCGACTTTCAGAGCATCTATGGTGGAACAGTTTGCATTGAGTGATAAAA
ACAAATGGATTTCTTTTGGTGGTTCATATCCTGGTGCTTTGTCAGCATGG
TTCAGATATAAATTTCCACATCTGGTTCACGGTGAGTTTTATTTCGTTGA
TTTTAAGTAGGGTTCATAAAAGCATAATGAAGGACCAACCAATTATGCAT
CTTTTTTAAGTGCTCCGAACCCACAGTGTATGCCTACTATGCGTGACGTA
TTTTAAGTATTCATTTGGGTAACAAAAATCCTTTGTTTTATTTTATTCTT
TTCTTGTTTATAAAGGTGCCGTTGCTAGTAGTGCACCCATCAATGCTCAA
ACAGATTTCCCTGAATATTTGGAAGTGTCTACAGATTCTTTGGGCACACA
AGAATGTAAAGACAGTGTACAAGCGGCAACTACCAGTGTGGAAAAATATG
TTCAAACAGAAGCTGGGCGGAAAATGCTGACTGATCTCTTCCAGTACGTA
AGACAAAGGCTGCATTCTAGTAACCAATTTCCATAAGCGGTTTTAGACCA
TGTCGAACTTATCAGAGGAAGAGATTTGTAATTGTAATTTCATTGTTTTT
TAACGAGCGTTGCACTCATTCGCATGTTTCCGACGTACTTGCTCTATTGT
CTTAAATCCGCCAGTATTTCCATTACTTTATCAATTACGATCAGTATATC
TAACATTTCGAGTTTCGTTCCAGCATCATGCTTTTTCTATGGTAATTTGA
GAATTTTATATTTTTAGAGGAAAAGTTACGTTACGTAACGCTCTTTTTGA
CTGGATACCACATCGATTAATTGCACCCACGAGAGGTTCAATGAGGCATA
GAATAGTTATAGATAGATAGAGTCGATATTTTACGTGGATAACCCAGTAG
TCTAGGACTTTTAGACAGTCTTTCGATTGTTTTCACGGGGTCCACGGCTA
GCCGGCGCGGCTATCTATGAACTGAACGGAACATTGGAAGGAGTTGGGAT
TCGAGCCTCGAATCCCTGGTTTGAGATGCTAACTNCATTGGAATGGGTGG
GGATTCGAACTCGAACTGCGAATCCTTGGTTTGAGATGCTAACGCTTTTG
ACCACTTGGCCATCGCTCCATAAAGCTCCATAGTTCTCTGATCGTGGCAC
AAAATTCAAGAAGTGTACCTTTTAGTAGTTGATCTCTATATTATAATGAT
AGTCTTTTCTTATGTTTACAGTCTTTGTGAGCCTCTGAGTGACGATCCAA
ACGACATTTCTCAATTCACTTCATCAATGGCTGGTAATTTCTTTGGTGTC
ATCCAATACAATAAAGACAATCGTGCTTTCGAGGTGGGTACAAAAATTAG
TGTATGATGATTGCTAATGATACAGTCCCCAAGTTAAGGGAACCAATGTC
TTAGTTTGAATTGAAGGCAGATTCGAATAACATGTTAGAACTATATGGAG
TAGAACGTATATTCAGTGGACATGAAATTTTACGTAGAGGTATTCGGGAT
ATAATGTCTTCTGACATTACATCACTTTTATAACACCAGATTGATTGCAA
CATATTCATGATATGCACCACTGCAATGTCTTCTGTATTACATAAAGGAC
CCAATAGCTGAGTGGTTGTAAGTGAATAATTAGTCAATAAGTCACTTTCA
ACCAATCAGCTGTGGAAGACATTGCAATTGCAAATATCACGAAATGAGTG
ACCAGAAAAGATGCAGAATTTCGTGAATTCGTTGCAGTGGTGCATATCGT
GGCCTTAGTGTAATTTCATTGTTTGAGAAATTTATAATATACATCGATCA
GAATGCACTAATTAATTCGTCTAAGGAATTTTTACATCACTATCTTTTGA
ATTGAATCTTCGCCATAGGGAGCCACAGGTACCAACATCACAGTGGACAC
ATTATGTAACATCATGTCCTTACCAATATTTGGTGATGAGATGCATCGCT
ATGCCAAGATCAACGAAATCATGATGGAAACATACAAACAAACTTGCATC
TCACCCAATTATAAGAAATTCATTGAAGAAATGCAAGTCACCGATTGGAA
ATCTGTGGAAGGAGGTGACACTATTTTACGATTCGCAGCCTCTGATACTG
TTTCAGTCTGAATCTGCACATTCCAGAAAGCCTTACACGTGTAAAAGATT
AGTATAGCTAAATGATTTGAGTCCAACCTTTAACAGCCCCGGCAATCACA
TAGGTGTTAAGATTTCTCGCAATGTCTTCCTCGAGATTATTAAGAATGAC
GTCACAGTTTGATTTCCAGGAGGTCTCTTCAAATTTTAAAACAAGAAAAA
CCTACAACGTTTGCCATGATATTTGGAAAAAAATGAAATTCCCTCAAATT
TAAAAACACAGTTGGTGTTTTGAGTTCTTTAACTAAGGTTAGAAAGTAGA
GTTTTAAATCTGAGTTTTTAACATTAGAATGTCAATGTATCAAAAAGTTC
AAAAGTAGTGATCCAACAAGGCTTAGAATAAAGCTTGAAAGCCAATAAAC
CATCCCAAATTGAAAAGCTCAATGAGGCTGAAATCACCGTTCTCGCCCAA
ACTTGAAATTTCAAAAAACGATAAAATACACCGAATTCCCAATATATTTT
GACTTGTAATGCAGGTGGTATCCTCTTTTCTTGACCTCTCCTAGTCGGGA
TCTTTATTTATTGTTATCGAGTACTCTTAGGTCCCAAATAAACGGGGGGG
GTGGGGAATTTGTGAGATTTTAATAAAAGGGGGAGACCTAATTTCCGGAG
ATGATGGAAAACCCTTCTGAAATGGATGGAAAACTACTTCTGAAAACCCA
AAAATAAGGTAAATATAAGGCCAAAATCAGGCTATTTAGAGCAAAATAAG
GGGCCTTCTCTTTAAGACAGCTGAAAATATTTAAAAAAATTAATAAACGG
GGGGAGGTCCTAATAAGGTCCGGGGGGTTGGAAAATTTTCGAAAAATTTA
CAAGGGGGGGGGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCAGTCAATAAGTC
ACTTTCAACCAATCAGCTGTGGAAGACATTGCAATTGCAAATATCACGAA
ATGAGTGACCAGAAAAGATGCAGAATTTCGTGAATTCGTTGCAGTGGTGC
ATATCGTGGCCTTAGTGTAATTTCATTGTTTGAGAAATATATAATATACA
TCGATCAGAATGCACTAATTAATTCACTAATTTTTACATCAATATCTTTT
GAATTGAATCTTCGCCATAGGGAGCCACAGGTACCAACATCACAGTGGAC
ACATTATGTAACATCATGTCCTTACCAATATTTGGTGATGAGATGCATCG
CTATGCCAAGATCAACGAAATCATGATGGAAACATACAAACAAACTTGCA
TCTCACCCAATTATAAAAAATTCATTGAAGAAATGAAGGTCATCGATTGG
AAATCTGTGGAAGGAGGTGACACTATTTGTGAGATTTTAATAAAAGGGGG
AGACCTAATTTCCGGGGAGGATGGAAAACCCTTCTGAAATGGATGGAAAA
CCACTTCTGAAAACCCAAAAATAGGTAAATATTAGGCCAAAATCAGGCTA
TTTAGAGGAAAATAAGGGGCCTTCTCTTTAAGACAGCTGAAAATATTAAA
AAAATTTATAAACGGGGGGAGGTCCTAATAAGGTCCGGGGGGTTGGAAAA
TTTTCGAAAAATTTACAAGGGGGGGGGTGTTTGGGTGTTTATTTGGAATC
TAAGAGTACATTAAACATTGAATTGATATAACTGAAAATCCGGTTCAAAA
CAACACGAGATGATGAAGCTTAATTGATGTTTTAAACTTTTTGTTCACAG
GTCGTCAATGGACATATCAAACTTGCACCGAGTTTGGTTATTACCAATCA
TCGGACAGCAAATCACAAGTCTATGGCACAACATTCCCTTTGAGGTAAGA
TTGATAAGGCTCCTTGGCCAGTTTGCAGCATTCTTGGCTTTTCAGATTAG
CTTTAAATGATTTGAGAGGGACTAAATTTTTTTTTTAATTCTGAAAAAGA
CACATGAGCGCTGACACTCCTTTCTATGACTCTCTCTTTAGCTATTCATA
TTATTCTGAACTTTTACACCCCTTGCCAAAATAAATTCCCTTAGTATGTT
TAATTTCAGCCCTGGGAAAGATTTAGTGAGGTAAAGTCAATTGTTAAAGC
TTCTCAATCTCGAAGCCGTACCCAGAGCAATTTCCACCATTTATTTTATT
TTTCTGGTGAACGTAAGTGCAATCGTAAGCAATATCAAAATCATAAGAAA
ATAACTGGGTATGAATTCCGTAGACTAATTTTTCTCTCGTGTTCACTTTA
TCTAGTTTTTGGACGAAACAATGTGTGGATATTTTTGGCGCCAATTTCAA
CGAGACGAGTATCAACCGAGCTGTTGATTGGACCAATGATAATTACGGTG
GCTACAATATGAACCAACCAAGGGTATTTCTTTTAAAATCTTTAACGATT
TGGAAAATTGATTTGAAAGCTATAGAAATGGGACAAGTTGGAGTTTTTGC
AAGCTCTTATTTTATTTGGTTGGTCGTTAACCTGTAATAATGAATTAAAA
AACAATTTTGCGTCAAATCCAGATTATATCATGGATATTGATAAATGTTT
TCCCGTTACAGCCATTTTTAAGCCATAGAAAATCATATACAACACTAAAA
ATCCATTTAGTTCTCCGAACTATTTTTCATTGCATTGTGTTGACTGATAT
TCTCTAGAACGAAATTTTGGAACTAATTTTAATCTCACTAAGAATTATAA
ACATGCTCAAATTATTGAGTATCACCGATACCTCTCTTTTTTTTCAGATT
GTCTTTCCGAACGGTTCAATAGATCCTTGGCATGCGTTGAGTTTCACCGA
TGATCATNACT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_015031XLOC_015031Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00026752-exon-sc0000582-1575043694:17533..17621TCONS_00026752-exon-sc0000582-1575043694:17533..17621Clytia hemisphaericaexon
TCONS_00026752-exon-sc0000582-1575043694:10281..10696TCONS_00026752-exon-sc0000582-1575043694:10281..10696Clytia hemisphaericaexon
TCONS_00026752-exon-sc0000582-1575043694:9691..9878TCONS_00026752-exon-sc0000582-1575043694:9691..9878Clytia hemisphaericaexon
TCONS_00026752-exon-sc0000582-1575043694:9329..9506TCONS_00026752-exon-sc0000582-1575043694:9329..9506Clytia hemisphaericaexon
TCONS_00026752-exon-sc0000582-1575043694:8489..8600TCONS_00026752-exon-sc0000582-1575043694:8489..8600Clytia hemisphaericaexon
TCONS_00026752-exon-sc0000582-1575043694:7758..7953TCONS_00026752-exon-sc0000582-1575043694:7758..7953Clytia hemisphaericaexon
TCONS_00026752-exon-sc0000582-1575043694:5778..5871TCONS_00026752-exon-sc0000582-1575043694:5778..5871Clytia hemisphaericaexon
TCONS_00026752-exon-sc0000582-1575043694:5249..5366TCONS_00026752-exon-sc0000582-1575043694:5249..5366Clytia hemisphaericaexon
TCONS_00026752-exon-sc0000582-1575043694:4811..4874TCONS_00026752-exon-sc0000582-1575043694:4811..4874Clytia hemisphaericaexon
TCONS_00026752-exon-sc0000582-1510915933:17533..17621TCONS_00026752-exon-sc0000582-1510915933:17533..17621Clytia hemisphaericaexon
TCONS_00026752-exon-sc0000582-1510915933:10281..10696TCONS_00026752-exon-sc0000582-1510915933:10281..10696Clytia hemisphaericaexon
TCONS_00026752-exon-sc0000582-1510915933:9691..9878TCONS_00026752-exon-sc0000582-1510915933:9691..9878Clytia hemisphaericaexon
TCONS_00026752-exon-sc0000582-1510915933:9329..9506TCONS_00026752-exon-sc0000582-1510915933:9329..9506Clytia hemisphaericaexon
TCONS_00026752-exon-sc0000582-1510915933:8489..8600TCONS_00026752-exon-sc0000582-1510915933:8489..8600Clytia hemisphaericaexon
TCONS_00026752-exon-sc0000582-1510915933:7758..7953TCONS_00026752-exon-sc0000582-1510915933:7758..7953Clytia hemisphaericaexon
TCONS_00026752-exon-sc0000582-1510915933:5778..5871TCONS_00026752-exon-sc0000582-1510915933:5778..5871Clytia hemisphaericaexon
TCONS_00026752-exon-sc0000582-1510915933:5249..5366TCONS_00026752-exon-sc0000582-1510915933:5249..5366Clytia hemisphaericaexon
TCONS_00026752-exon-sc0000582-1510915933:4811..4874TCONS_00026752-exon-sc0000582-1510915933:4811..4874Clytia hemisphaericaexon
TCONS_00026752-exon-sc0000582-1491911889:17533..17621TCONS_00026752-exon-sc0000582-1491911889:17533..17621Clytia hemisphaericaexon
TCONS_00026752-exon-sc0000582-1491911889:10281..10696TCONS_00026752-exon-sc0000582-1491911889:10281..10696Clytia hemisphaericaexon
TCONS_00026752-exon-sc0000582-1491911889:9691..9878TCONS_00026752-exon-sc0000582-1491911889:9691..9878Clytia hemisphaericaexon
TCONS_00026752-exon-sc0000582-1491911889:9329..9506TCONS_00026752-exon-sc0000582-1491911889:9329..9506Clytia hemisphaericaexon
TCONS_00026752-exon-sc0000582-1491911889:8489..8600TCONS_00026752-exon-sc0000582-1491911889:8489..8600Clytia hemisphaericaexon
TCONS_00026752-exon-sc0000582-1491911889:7758..7953TCONS_00026752-exon-sc0000582-1491911889:7758..7953Clytia hemisphaericaexon
TCONS_00026752-exon-sc0000582-1491911889:5778..5871TCONS_00026752-exon-sc0000582-1491911889:5778..5871Clytia hemisphaericaexon
TCONS_00026752-exon-sc0000582-1491911889:5249..5366TCONS_00026752-exon-sc0000582-1491911889:5249..5366Clytia hemisphaericaexon
TCONS_00026752-exon-sc0000582-1491911889:4811..4874TCONS_00026752-exon-sc0000582-1491911889:4811..4874Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000582supercontigsc0000582:4811..17621 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
23.6731	24.541	24.9638	21.41	6.52832	2.92474e-09	1.65302e-07	1.37175e-09	16.6458	6.57441	18.4061	22.2822	21.9871	25.0445	25.9017	42.7093	23.3124	16.5738	19.6376	17.1327	20.7428	22.0995	33.8478	33.5544	7.23622	0.901782	11.406	10.1654	48.9991	42.659
Blast
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BLAST of TCONS_00026752 vs. Swiss-Prot (Human)
Match: TSSP (Thymus-specific serine protease OS=Homo sapiens GN=PRSS16 PE=2 SV=2)

HSP 1 Score: 239.965 bits (611), Expect = 6.959e-72
Identity = 146/418 (34.93%), Postives = 222/418 (53.11%), Query Frame = 3 
Query:  252 AAEPQ--WYTQQLNHFDDQDTRTWQQKYYVNATQF-GENGPVFLMIGGEGPLSARWVGVGSMVEMAKEHKALVLALEHRYYGDSHPTSDTSVENLKYLSSEQALADLATFRASMVEQFALSDKNKWISFGGSYPGALSAWFRYKFPHLVHGAVASSAPINAQTDFPEYLEVSTDSL------GTQECKDSVQAATTSVEKYVQT-EAGRKMLTDLFHLCEPLSDDPNDISQFTSSMAGNFFGVIQYNKDNRAFEGATGTNITVDTLCNIM---------SLPIFGDEMHRYAKINEIMMETYKQTCISPNYKKFIEEMQVTDWK-SVEGGRQWTYQTCTEFGYYQSSDSKSQVYGTTFPLSFWTKQCVDIFGANFNETSINRAVDWTNDNYGGYNMNQPRIVFPNGSIDPWHALSFTD 1445
            AA P+  W  Q L+ F+  D R++ Q+Y+VN   + G++GP+FL +GGEG L    V  G    +A    ALV++LEHR+YG S P     +  L++LSS  ALAD+ + R ++   F +S  + WI FGGSY G+L+AW R KFPHL+  +VASSAP+ A  DF EY +V + SL      G+ EC+ +V  A   VE+ +++  A +  L      C PL    N  ++   ++     GV+QY+       G TG  ++V  LC ++         S P  G       +  +I++ +  Q C+S +  + + +++ T+ + S  G RQW YQTCTEFG+Y + ++    +     L      C  +FG   +  S+ +AV  TN  YGG      +++F NG  DPWH LS T 
Sbjct:   54 AALPKVGWLEQLLDPFNVSDRRSFLQRYWVNDQHWVGQDGPIFLHLGGEGSLGPGSVMRGHPAALAPAWGALVISLEHRFYGLSIPAGGLEMAQLRFLSSRLALADVVSARLALSRLFNISSSSPWICFGGSYAGSLAAWARLKFPHLIFASVASSAPVRAVLDFSEYNDVVSRSLMSTAIGGSLECRAAVSVAFAEVERRLRSGGAAQAALRTELSACGPLGRAENQ-AELLGALQALVGGVVQYD-------GQTGAPLSVRQLCGLLLGGGGNRSHSTPYCG-----LRRAVQIVLHSLGQKCLSFSRAETVAQLRSTEPQLSGVGDRQWLYQTCTEFGFYVTCENPRCPFSQLPALPSQLDLCEQVFG--LSALSVAQAVAQTNSYYGGQTPGANKVLFVNGDTDPWHVLSVTQ 456
The following BLAST results are available for this feature:
BLAST of TCONS_00026752 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
TSSP6.959e-7234.93Thymus-specific serine protease OS=Homo sapiens GN... [more]
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