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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00026614 ID=TCONS_00026614|Name=TCONS_00026614|organism=Clytia hemisphaerica|type=transcript|length=1095bp
CACTTGTTCAGTtacaaaattagcaaaaaatatGTAGTCTGAATCAGAAG
CAAACTTTTGTGTATAGTTCAATAAACGCTGGTTAAAGTACTTTGATGGA
CTTAGTTTAACATCGCGTTCAACTTTGTAACCAAATTTCCCTTTAGGAAA
TAAATGGGGATGTGCAAGTATTTCACAATTTTCATCATTCAAGATTGAAA
TAGGTTTTTTACCTTGACCAGGTGCTAAcaacaaaatttcattatctacT
TCTGCATCAGTAGGAGTGTGAGGCAAGAGAGTTGTTTCATTTGCATTTGA
ACGGTGAGCATCAAGTGGGTTGGCTGTTGTTTCAAGCTCTTTGGAATCTG
AAGCATTATTCTGTGGTTCATTACTATTGTCATTAGAAACATTTTCATCA
AATTGGTCACTTTCATTAGGATTTGTTTCCTCGTTGAGATCTGCAGCATT
CTGTATCATGGTCTCGTCATTTGAAATATTACTGACATTAATTTCTATGT
CTTGATAAAGAGGATTGTTCTCTTTGAAATAATCCAATATGCGCTGAATG
AAATCGGGTCTGATTGGCTCAAAAACAACATGTCCGTTATATTCTAATTT
TCTTTTGAGTTTAACAATGACTAATCCATTATCGACTGATCTTCTTGGTA
AAGTATTAGCGATATCTTCAACATCAATAGGTACATTACAAATAGAACCT
TTGAGTTTGGGGAACTGACCTTTTGGCATGattgcaatttttttaaataa
tatcctgcgagaaatcaaaatcttttcaaGCCTGCGAAGAGTGCGAAATT
CAGCGGGTAATTCATTGAGGGTAagtttatttttgacagattgaCATGGT
AactcattttttttaagtttgttaTGACATGTTTTACCATCAAATGAAAT
AACTTCAGAATAATAATATTCTTGTGGCATATCATACTTTTCGGGTGAAT
ATTTGACAACTGTTTTTCGATAGAGGCATCTGTTACAGCAAACACAAATG
TAAAAAGGACCTTCATAaataagtttcaaaaattttgacactcgatcatt
ttgttggtttttgtttttctcataATAGGTCTTTTTCCTTTCTGC Run BLAST on NCBI protein sequence of TCONS_00026614-protein >TCONS_00026614-protein ID=TCONS_00026614-protein|Name=TCONS_00026614-protein|organism=Clytia hemisphaerica|type=polypeptide|length=365bp
AERKKTYYEKNKNQQNDRVSKFLKLIYEGPFYICVCCNRCLYRKTVVKYS
PEKYDMPQEYYYSEVISFDGKTCHNKLKKNELPCQSVKNKLTLNELPAEF
RTLRRLEKILISRRILFKKIAIMPKGQFPKLKGSICNVPIDVEDIANTLP
RRSVDNGLVIVKLKRKLEYNGHVVFEPIRPDFIQRILDYFKENNPLYQDI
EINVSNISNDETMIQNAADLNEETNPNESDQFDENVSNDNSNEPQNNASD
SKELETTANPLDAHRSNANETTLLPHTPTDAEVDNEILLLAPGQGKKPIS
ILNDENCEILAHPHLFPKGKFGYKVERDVKLSPSKYFNQRLLNYTQKFAS
DSDYIFFANFVTEQV Run BLAST on NCBI transcript from alignment at sc0000576:76877..77971 Legend: exonCDS Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00026614 ID=TCONS_00026614|Name=TCONS_00026614|organism=Clytia hemisphaerica|type=transcript|length=1095bp|location=Sequence derived from alignment at sc0000576:76877..77971 (Clytia hemisphaerica)
GCAGAAAGGAAAAAGACCTATtatgagaaaaacaaaaaccaacaaaatga
tcgagtgtcaaaatttttgaaacttattTATGAAGGTCCTTTTTACATTT
GTGTTTGCTGTAACAGATGCCTCTATCGAAAAACAGTTGTCAAATATTCA
CCCGAAAAGTATGATATGCCACAAGAATATTATTATTCTGAAGTTATTTC
ATTTGATGGTAAAACATGTCAtaacaaacttaaaaaaaatgagtTACCAT
GtcaatctgtcaaaaataaactTACCCTCAATGAATTACCCGCTGAATTT
CGCACTCTTCGCAGGCttgaaaagattttgatttctcgcaggatattatt
taaaaaaattgcaatCATGCCAAAAGGTCAGTTCCCCAAACTCAAAGGTT
CTATTTGTAATGTACCTATTGATGTTGAAGATATCGCTAATACTTTACCA
AGAAGATCAGTCGATAATGGATTAGTCATTGTTAAACTCAAAAGAAAATT
AGAATATAACGGACATGTTGTTTTTGAGCCAATCAGACCCGATTTCATTC
AGCGCATATTGGATTATTTCAAAGAGAACAATCCTCTTTATCAAGACATA
GAAATTAATGTCAGTAATATTTCAAATGACGAGACCATGATACAGAATGC
TGCAGATCTCAACGAGGAAACAAATCCTAATGAAAGTGACCAATTTGATG
AAAATGTTTCTAATGACAATAGTAATGAACCACAGAATAATGCTTCAGAT
TCCAAAGAGCTTGAAACAACAGCCAACCCACTTGATGCTCACCGTTCAAA
TGCAAATGAAACAACTCTCTTGCCTCACACTCCTACTGATGCAGAAgtag
ataatgaaattttgttgTTAGCACCTGGTCAAGGTAAAAAACCTATTTCA
ATCTTGAATGATGAAAATTGTGAAATACTTGCACATCCCCATTTATTTCC
TAAAGGGAAATTTGGTTACAAAGTTGAACGCGATGTTAAACTAAGTCCAT
CAAAGTACTTTAACCAGCGTTTATTGAACTATACACAAAAGTTTGCTTCT
GATTCAGACTACatattttttgctaattttgtaACTGAACAAGTG Coding sequence (CDS) from alignment at sc0000576:76877..77971 >TCONS_00026614 ID=TCONS_00026614|Name=TCONS_00026614|organism=Clytia hemisphaerica|type=CDS|length=1095bp|location=Sequence derived from alignment at sc0000576:76877..77971 (Clytia hemisphaerica)
GCAGAAAGGAAAAAGACCTATtatgagaaaaacaaaaaccaacaaaatga
tcgagtgtcaaaatttttgaaacttattTATGAAGGTCCTTTTTACATTT
GTGTTTGCTGTAACAGATGCCTCTATCGAAAAACAGTTGTCAAATATTCA
CCCGAAAAGTATGATATGCCACAAGAATATTATTATTCTGAAGTTATTTC
ATTTGATGGTAAAACATGTCAtaacaaacttaaaaaaaatgagtTACCAT
GtcaatctgtcaaaaataaactTACCCTCAATGAATTACCCGCTGAATTT
CGCACTCTTCGCAGGCttgaaaagattttgatttctcgcaggatattatt
taaaaaaattgcaatCATGCCAAAAGGTCAGTTCCCCAAACTCAAAGGTT
CTATTTGTAATGTACCTATTGATGTTGAAGATATCGCTAATACTTTACCA
AGAAGATCAGTCGATAATGGATTAGTCATTGTTAAACTCAAAAGAAAATT
AGAATATAACGGACATGTTGTTTTTGAGCCAATCAGACCCGATTTCATTC
AGCGCATATTGGATTATTTCAAAGAGAACAATCCTCTTTATCAAGACATA
GAAATTAATGTCAGTAATATTTCAAATGACGAGACCATGATACAGAATGC
TGCAGATCTCAACGAGGAAACAAATCCTAATGAAAGTGACCAATTTGATG
AAAATGTTTCTAATGACAATAGTAATGAACCACAGAATAATGCTTCAGAT
TCCAAAGAGCTTGAAACAACAGCCAACCCACTTGATGCTCACCGTTCAAA
TGCAAATGAAACAACTCTCTTGCCTCACACTCCTACTGATGCAGAAgtag
ataatgaaattttgttgTTAGCACCTGGTCAAGGTAAAAAACCTATTTCA
ATCTTGAATGATGAAAATTGTGAAATACTTGCACATCCCCATTTATTTCC
TAAAGGGAAATTTGGTTACAAAGTTGAACGCGATGTTAAACTAAGTCCAT
CAAAGTACTTTAACCAGCGTTTATTGAACTATACACAAAAGTTTGCTTCT
GATTCAGACTACatattttttgctaattttgtaACTGAACAAGTG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00026614-exon-sc0000576-1491911889:76877..77971 | TCONS_00026614-exon-sc0000576-1491911889:76877..77971 | Clytia hemisphaerica | exon |
| TCONS_00026614-exon-sc0000576-1510915933:76877..77971 | TCONS_00026614-exon-sc0000576-1510915933:76877..77971 | Clytia hemisphaerica | exon |
| TCONS_00026614-exon-sc0000576-1575043694:76877..77971 | TCONS_00026614-exon-sc0000576-1575043694:76877..77971 | Clytia hemisphaerica | exon |
The following polypeptide feature(s) derives from this transcript:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000576 | supercontig | sc0000576:76877..77971 . |
Blast
The following BLAST results are available for this feature:
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